CaUC02G031700 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC02G031700
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	chaperone protein DnaJ
Location	Ciama_Chr02: 6135404 .. 6136111 (+)
RNA-Seq Expression	CaUC02G031700
Synteny	CaUC02G031700

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATTGGTTCAAAAAGGAGTGGCGTCATCACAATTTTCTTGTGCTTTTTCAGTAGGAGTCTAAGGAACCAAGCCGACCCGCAAACCGAACCGAACCGGATCGGTTCGGCAGGAGAAATTGGCATTAGGGTTTGATTTGGTATCATCAAGTTCATCCATTCTCATCGGTCGAAGAAGGCGCTGGAATCGGTTCTACTCGTAGGCCATATCTTAAGCTTTGGTGGGTTTCTCTTTTCTATCTCTCTCCATTGCCATTTCGTTTTGTTTTTGATCAGGAATGTGCTTTGGATTTGCAGGTCTGCAACTTCATCGCGCCCCAAGGCCGAAATTGCCTTCAAGCTTGGGTCTGAGGTTTGATTCCATTCATTTTCTTGGGAACTCAACTTTCTGCCATATATCTTTTCTATATTTTTGTGATTTTTCTTTCTAGAGTTTTTTTTCCATGGCGATCAATTACTGTTTCTCTTGCATTTCTAATGAATGCTATAATGAAACTTTGTGTTCTTCAGTTTAATGCAAAATCAATTCTGAAGGATGAGAAATGTGAATGGGAATGAGGGATTGTTTATTTGTGTTTGTAGGGATATGGTTGTTTGAGTGATAATGTGAACAGAAGGGAATTTGATTTGGATAGGAAGAAGTTTTGCCCCGATTGCAACTCAATCCCTTATAGAAATTTCAGCTCTGCTAGAAACTTGAATGCCTGA

mRNA sequence

ATGAATTGGAGTCTAAGGAACCAAGCCGACCCGCAAACCGAACCGAACCGGATCGGTTCGGCAGGAGAAATTGGCATTAGGTTCATCCATTCTCATCGGTCGAAGAAGGCGCTGGAATCGGTTCTACTCGTAGGCCATATCTTAAGCTTTGGTGGGAATGTGCTTTGGATTTGCAGGTCTGCAACTTCATCGCGCCCCAAGGCCGAAATTGCCTTCAAGCTTGGGTCTGAGGGATATGGTTGTTTGAGTGATAATGTGAACAGAAGGGAATTTGATTTGGATAGGAAGAAGTTTTGCCCCGATTGCAACTCAATCCCTTATAGAAATTTCAGCTCTGCTAGAAACTTGAATGCCTGA

Coding sequence (CDS)

ATGAATTGGAGTCTAAGGAACCAAGCCGACCCGCAAACCGAACCGAACCGGATCGGTTCGGCAGGAGAAATTGGCATTAGGTTCATCCATTCTCATCGGTCGAAGAAGGCGCTGGAATCGGTTCTACTCGTAGGCCATATCTTAAGCTTTGGTGGGAATGTGCTTTGGATTTGCAGGTCTGCAACTTCATCGCGCCCCAAGGCCGAAATTGCCTTCAAGCTTGGGTCTGAGGGATATGGTTGTTTGAGTGATAATGTGAACAGAAGGGAATTTGATTTGGATAGGAAGAAGTTTTGCCCCGATTGCAACTCAATCCCTTATAGAAATTTCAGCTCTGCTAGAAACTTGAATGCCTGA

Protein sequence

MNWSLRNQADPQTEPNRIGSAGEIGIRFIHSHRSKKALESVLLVGHILSFGGNVLWICRSATSSRPKAEIAFKLGSEGYGCLSDNVNRREFDLDRKKFCPDCNSIPYRNFSSARNLNA

Homology

[Close]

BLAST of CaUC02G031700 vs. NCBI nr
Match: XP_038902437.1 (uncharacterized protein LOC120089081 [Benincasa hispida])

HSP 1 Score: 104.4 bits (259), Expect = 7.0e-19
Identity = 49/56 (87.50%), Postives = 52/56 (92.86%), Query Frame = 0


Query: 63  SSRPKAEIAFKLGSEGYGCLSDNVNRREFDLDR-KKFCPDCNSIPYRNFSSARNLN 118
           +S PKAEIAFKL SEGYGCLSDNV RREFDLDR KKFCPDCN+IPYRNF+SARNLN
Sbjct: 68  NSHPKAEIAFKLVSEGYGCLSDNVKRREFDLDRKKKFCPDCNTIPYRNFTSARNLN 123

[Close]

BLAST of CaUC02G031700 vs. NCBI nr
Match: KAA0049521.1 (chaperone protein DnaJ [Cucumis melo var. makuwa])

HSP 1 Score: 101.3 bits (251), Expect = 5.9e-18
Identity = 48/57 (84.21%), Postives = 51/57 (89.47%), Query Frame = 0


Query: 63  SSRPKAEIAFKLGSEGYGCLSDNVNRREFDLDRK-KFCPDCNSIPYRNFSSARNLNA 119
           +S PKAEIAFKL SEGYGCLSDNV RR FDLDRK KFCPDCN+IPYRNF+SA NLNA
Sbjct: 68  NSHPKAEIAFKLVSEGYGCLSDNVKRRAFDLDRKNKFCPDCNTIPYRNFTSATNLNA 124

[Close]

BLAST of CaUC02G031700 vs. NCBI nr
Match: TYK16200.1 (chaperone protein DnaJ [Cucumis melo var. makuwa])

HSP 1 Score: 101.3 bits (251), Expect = 5.9e-18
Identity = 48/57 (84.21%), Postives = 51/57 (89.47%), Query Frame = 0


Query: 63  SSRPKAEIAFKLGSEGYGCLSDNVNRREFDLDRK-KFCPDCNSIPYRNFSSARNLNA 119
           +S PKAEIAFKL SEGYGCLSDNV RR FDLDRK KFCPDCN+IPYRNF+SA NLNA
Sbjct: 68  NSHPKAEIAFKLVSEGYGCLSDNVKRRAFDLDRKNKFCPDCNTIPYRNFTSATNLNA 124

[Close]

BLAST of CaUC02G031700 vs. NCBI nr
Match: XP_008438915.1 (PREDICTED: chaperone protein DnaJ [Cucumis melo])

HSP 1 Score: 101.3 bits (251), Expect = 5.9e-18
Identity = 48/57 (84.21%), Postives = 51/57 (89.47%), Query Frame = 0


Query: 63  SSRPKAEIAFKLGSEGYGCLSDNVNRREFDLDRK-KFCPDCNSIPYRNFSSARNLNA 119
           +S PKAEIAFKL SEGYGCLSDNV RR FDLDRK KFCPDCN+IPYRNF+SA NLNA
Sbjct: 68  NSHPKAEIAFKLVSEGYGCLSDNVKRRAFDLDRKNKFCPDCNTIPYRNFTSATNLNA 124

[Close]

BLAST of CaUC02G031700 vs. NCBI nr
Match: XP_004134496.2 (uncharacterized protein LOC101213407 [Cucumis sativus] >KGN57140.1 hypothetical protein Csa_010349 [Cucumis sativus])

HSP 1 Score: 97.1 bits (240), Expect = 1.1e-16
Identity = 46/57 (80.70%), Postives = 50/57 (87.72%), Query Frame = 0


Query: 63  SSRPKAEIAFKLGSEGYGCLSDNVNRREFDLDRK-KFCPDCNSIPYRNFSSARNLNA 119
           +S PKAEIAFKL SEGYGCLSDNV RR FDLDRK KFC DCN+IPYRN++SA NLNA
Sbjct: 68  NSHPKAEIAFKLVSEGYGCLSDNVKRRAFDLDRKDKFCADCNTIPYRNYTSATNLNA 124

[Close]

BLAST of CaUC02G031700 vs. ExPASy TrEMBL
Match: A0A5D3CXW5 (Chaperone protein DnaJ OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G001280 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 2.9e-18
Identity = 48/57 (84.21%), Postives = 51/57 (89.47%), Query Frame = 0


Query: 63  SSRPKAEIAFKLGSEGYGCLSDNVNRREFDLDRK-KFCPDCNSIPYRNFSSARNLNA 119
           +S PKAEIAFKL SEGYGCLSDNV RR FDLDRK KFCPDCN+IPYRNF+SA NLNA
Sbjct: 68  NSHPKAEIAFKLVSEGYGCLSDNVKRRAFDLDRKNKFCPDCNTIPYRNFTSATNLNA 124

[Close]

BLAST of CaUC02G031700 vs. ExPASy TrEMBL
Match: A0A5A7U7H9 (Chaperone protein DnaJ OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G007750 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 2.9e-18
Identity = 48/57 (84.21%), Postives = 51/57 (89.47%), Query Frame = 0


Query: 63  SSRPKAEIAFKLGSEGYGCLSDNVNRREFDLDRK-KFCPDCNSIPYRNFSSARNLNA 119
           +S PKAEIAFKL SEGYGCLSDNV RR FDLDRK KFCPDCN+IPYRNF+SA NLNA
Sbjct: 68  NSHPKAEIAFKLVSEGYGCLSDNVKRRAFDLDRKNKFCPDCNTIPYRNFTSATNLNA 124

[Close]

BLAST of CaUC02G031700 vs. ExPASy TrEMBL
Match: A0A1S3AXH7 (chaperone protein DnaJ OS=Cucumis melo OX=3656 GN=LOC103483872 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 2.9e-18
Identity = 48/57 (84.21%), Postives = 51/57 (89.47%), Query Frame = 0


Query: 63  SSRPKAEIAFKLGSEGYGCLSDNVNRREFDLDRK-KFCPDCNSIPYRNFSSARNLNA 119
           +S PKAEIAFKL SEGYGCLSDNV RR FDLDRK KFCPDCN+IPYRNF+SA NLNA
Sbjct: 68  NSHPKAEIAFKLVSEGYGCLSDNVKRRAFDLDRKNKFCPDCNTIPYRNFTSATNLNA 124

[Close]

BLAST of CaUC02G031700 vs. ExPASy TrEMBL
Match: A0A0A0L5B2 (J domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G165080 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 5.4e-17
Identity = 46/57 (80.70%), Postives = 50/57 (87.72%), Query Frame = 0


Query: 63  SSRPKAEIAFKLGSEGYGCLSDNVNRREFDLDRK-KFCPDCNSIPYRNFSSARNLNA 119
           +S PKAEIAFKL SEGYGCLSDNV RR FDLDRK KFC DCN+IPYRN++SA NLNA
Sbjct: 68  NSHPKAEIAFKLVSEGYGCLSDNVKRRAFDLDRKDKFCADCNTIPYRNYTSATNLNA 124

[Close]

BLAST of CaUC02G031700 vs. ExPASy TrEMBL
Match: A0A6J1GV24 (dnaJ-related protein rsp1-like OS=Cucurbita moschata OX=3662 GN=LOC111457695 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 2.0e-16
Identity = 45/56 (80.36%), Postives = 48/56 (85.71%), Query Frame = 0


Query: 63  SSRPKAEIAFKLGSEGYGCLSDNVNRREFDLDR-KKFCPDCNSIPYRNFSSARNLN 118
           ++ PKAEIAFKL SEGYGCL DNV RR FDLDR KKFCPDCN+IPYRN SSARN N
Sbjct: 68  NAHPKAEIAFKLVSEGYGCLIDNVKRRAFDLDRMKKFCPDCNTIPYRNLSSARNSN 123

[Close]

BLAST of CaUC02G031700 vs. TAIR 10
Match: AT3G06778.1 (Chaperone DnaJ-domain superfamily protein )

HSP 1 Score: 48.1 bits (113), Expect = 5.5e-06
Identity = 21/48 (43.75%), Postives = 32/48 (66.67%), Query Frame = 0


Query: 63  SSRPKAEIAFKLGSEGYGCLSDNVNRREFDLDRK-KFCPDCNSIPYRN 110
           ++ PKA+IAFKL  E Y CLSD   RR F++DR+   C  C+ + +++
Sbjct: 74  NNHPKADIAFKLIHEAYLCLSDETKRRSFNIDRRNNICLKCSRVSHKS 121

The following BLAST results are available for this feature:

BLAST of CaUC02G031700 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038902437.1	7.0e-19	87.50	uncharacterized protein LOC120089081 [Benincasa hispida]	[more]
KAA0049521.1	5.9e-18	84.21	chaperone protein DnaJ [Cucumis melo var. makuwa]	[more]
TYK16200.1	5.9e-18	84.21	chaperone protein DnaJ [Cucumis melo var. makuwa]	[more]
XP_008438915.1	5.9e-18	84.21	PREDICTED: chaperone protein DnaJ [Cucumis melo]	[more]
XP_004134496.2	1.1e-16	80.70	uncharacterized protein LOC101213407 [Cucumis sativus] >KGN57140.1 hypothetical ...	[more]

BLAST of CaUC02G031700 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CaUC02G031700 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CXW5	2.9e-18	84.21	Chaperone protein DnaJ OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2...	[more]
A0A5A7U7H9	2.9e-18	84.21	Chaperone protein DnaJ OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1...	[more]
A0A1S3AXH7	2.9e-18	84.21	chaperone protein DnaJ OS=Cucumis melo OX=3656 GN=LOC103483872 PE=4 SV=1	[more]
A0A0A0L5B2	5.4e-17	80.70	J domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G165080 PE=4 SV=1	[more]
A0A6J1GV24	2.0e-16	80.36	dnaJ-related protein rsp1-like OS=Cucurbita moschata OX=3662 GN=LOC111457695 PE=...	[more]

BLAST of CaUC02G031700 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G06778.1	5.5e-06	43.75	Chaperone DnaJ-domain superfamily protein	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC02G031700.1	CaUC02G031700.1	mRNA