CaUC02G031210 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC02G031210
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	protein RADIALIS-like 1
Location	Ciama_Chr02: 5477469 .. 5479203 (-)
RNA-Seq Expression	CaUC02G031210
Synteny	CaUC02G031210

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCAATGTCAGCTCATGGGTCAGGTGTATGGACTGCAAAGCAAAACAAGGCGTTTGAGGAGGCTTTGGCAATGTATGATCAAGACACACCTGATAGATGGATTAATGTTGCAAAGGCCATTGGTGGGAAAACTGAAGAGGAAGTGAAAAGGCATTATCAAGTTCTTGTGGAGGATGTTAAGCATATTGAGTCTGGCAAAGTTCCTTTTCCTTATAGAAGCTCAAGAAGCAATAATTAAGTGCCGTACAGATGATGATGGAAAGATAGAGGTAATATATTATGCAGAAATAAATAAAACTGATTTGGAGTTTGTTTGATAATGTTTTTTGTTTTTTTTTTTTTCAATTTTTTTGAGAAGTAGAAGTGTTTGGTAACTGTTTATGTGTTTTTTTCTTCCTATTTTTTCTCAAAAGTTTCCAAACTCCGTTATGTTTCTCTTTATTGTAAAAGAGGAAATAAGAAACAAGATACGAGAAAATGATAAGAAATAAGAAACGAAAACACTACTATCTCTTTATTGTAAAAGAGGAAACCGTTATGTTTCTCTTTATTGTAAAAGAGGAAATAAGAAACAAGATACGAGAAAATGATAAGAAATGAGAAACAAAAACACTACCAAACAGATCTGTATTTTTTTTTTTTTTTCTCTGCTAAAAGAGATTAACCTTTGTAACACTACTTCCACTTCACATGTGTGTGTCTTTTCTACCCTATACTCTTAAAAAATATCTTCAAAAATTGAAAAGAAAGTTTCAAACTTTTTTTTTAATATTTAATTTTAGTGCAATGTGATTTTAAAAAACATAAACGATGTAGTAAACATTTTGAGAGAACTAACCAAAAAAACTAAAAATGAAATGATTATAGAACAAGTACTTAGATATATAATGAAAAAGAGCATCTTCTTTATGTGAAGCTATGTTTTATTCAATTTAATTATAAATTAAATAGCTATCATTTTCACAGATTAAACATAAATGAATATTCAATTTCATTGTAATTTTTCAAAAAGAAAAAAAAAAAACACTGGTAAAAGTATTATTTCGTCATCCTCATTAAATTATTTACAAGCAAGAAGGGGCTTAATTAAATCCACATCACCTTCTACTTAATTAATATCATATTTTCAACTGACTAGTTAACTTAATATATGAACACAACAAGAAATGATAGATATTTAGACATGGAAATTAAGAACAAGAAAATTGCAGTTTATTATATAGAGAAACCCTATCCAACGATTTGACTCTTTTATCTTATTATCAAGCCACAAAGCTTATGCCCTTTATTCACAGCAAAGTTTCATTATCAATGAACAGTTTCACATACATTCAAATATTTTTATAGAGACAAAGAATAGACAATAAAATATTTAATAAATTTTATATATTAATTATTTTTAAGGTTAGGATGAATCGAGATGACAAAATTGTTTTGCGTTTCTCTTTGTTGAAGTACCGATATGACTAAATTTATCAAGACCAAGAGCTTTTTTTGATGCATTAATACTTGAGTTTGATTTTAACCCAATATTTCATGTTCTTTGATTTTTATTTTTCCAGGAGGAGAAAAATGAAGTTCAATTATTAAGCCAGGTGCAGTACTGTAAGAATAAAAGAAGAAAAAGCCATTTTCTTGCTGTTGTATCTTTTTTTTTTTTTTTTCCTAACAAAAAAGAAAAAAAATTATATTTATATATATATTTGAAGTTCTCTATTGTATCTCTTTAA

mRNA sequence

ATGGCTTCAATGTCAGCTCATGGGTCAGGTGTATGGACTGCAAAGCAAAACAAGGCGTTTGAGGAGGCTTTGGCAATGTATGATCAAGACACACCTGATAGATGGATTAATGTTGCAAAGGCCATTGGTGGGAAAACTGAAGAGGAAGTGAAAAGGCATTATCAAGTTCTTGTGGAGGATTTCCTTTTCCTTATAGAAGCTCAAGAAGCAATAATTAAGTGCCGTACAGATGATGATGGAAAGATAGAGGAGGAGAAAAATGAAGTTCAATTATTAAGCCAGGTGCAGTACTGTAAGAATAAAAGAAGAAAAAGCCATTTTCTTGCTGTTTTCTCTATTGTATCTCTTTAA

Coding sequence (CDS)

ATGGCTTCAATGTCAGCTCATGGGTCAGGTGTATGGACTGCAAAGCAAAACAAGGCGTTTGAGGAGGCTTTGGCAATGTATGATCAAGACACACCTGATAGATGGATTAATGTTGCAAAGGCCATTGGTGGGAAAACTGAAGAGGAAGTGAAAAGGCATTATCAAGTTCTTGTGGAGGATTTCCTTTTCCTTATAGAAGCTCAAGAAGCAATAATTAAGTGCCGTACAGATGATGATGGAAAGATAGAGGAGGAGAAAAATGAAGTTCAATTATTAAGCCAGGTGCAGTACTGTAAGAATAAAAGAAGAAAAAGCCATTTTCTTGCTGTTTTCTCTATTGTATCTCTTTAA

Protein sequence

MASMSAHGSGVWTAKQNKAFEEALAMYDQDTPDRWINVAKAIGGKTEEEVKRHYQVLVEDFLFLIEAQEAIIKCRTDDDGKIEEEKNEVQLLSQVQYCKNKRRKSHFLAVFSIVSL

Homology

[Close]

BLAST of CaUC02G031210 vs. NCBI nr
Match: XP_022952073.1 (protein RADIALIS-like 1 [Cucurbita moschata] >XP_022972518.1 protein RADIALIS-like 1 [Cucurbita maxima] >XP_023554705.1 protein RADIALIS-like 1 [Cucurbita pepo subsp. pepo] >KAG6572043.1 Transcription factor RADIALIS, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 122.5 bits (306), Expect = 2.4e-24
Identity = 58/60 (96.67%), Postives = 59/60 (98.33%), Query Frame = 0


Query: 1  MASMSAHGSGVWTAKQNKAFEEALAMYDQDTPDRWINVAKAIGGKTEEEVKRHYQVLVED 60
          MASMSAHGSGVWTAKQNKAFEEALAMYDQD PDRW+NVAKAIGGKTEEEVKRHYQVLVED
Sbjct: 1  MASMSAHGSGVWTAKQNKAFEEALAMYDQDRPDRWLNVAKAIGGKTEEEVKRHYQVLVED 60

[Close]

BLAST of CaUC02G031210 vs. NCBI nr
Match: KAA0036170.1 (protein RADIALIS-like 1 [Cucumis melo var. makuwa])

HSP 1 Score: 120.9 bits (302), Expect = 7.1e-24
Identity = 56/60 (93.33%), Postives = 60/60 (100.00%), Query Frame = 0


Query: 1  MASMSAHGSGVWTAKQNKAFEEALAMYDQDTPDRWINVAKAIGGKTEEEVKRHYQVLVED 60
          MASMSAHGSGVWTAKQNKAFEEALAMYD+DTPDRW+NVAKAIGGKTEEEVKRHYQ+L+ED
Sbjct: 1  MASMSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLED 60

[Close]

BLAST of CaUC02G031210 vs. NCBI nr
Match: XP_004151116.1 (protein RADIALIS-like 1 [Cucumis sativus] >KGN44075.1 hypothetical protein Csa_020265 [Cucumis sativus])

HSP 1 Score: 119.8 bits (299), Expect = 1.6e-23
Identity = 55/60 (91.67%), Postives = 60/60 (100.00%), Query Frame = 0


Query: 1  MASMSAHGSGVWTAKQNKAFEEALAMYDQDTPDRWINVAKAIGGKTEEEVKRHYQVLVED 60
          MAS+SAHGSGVWTAKQNKAFEEALAMYD+DTPDRW+NVAKAIGGKTEEEVKRHYQ+L+ED
Sbjct: 1  MASLSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLED 60

[Close]

BLAST of CaUC02G031210 vs. NCBI nr
Match: XP_008447025.1 (PREDICTED: protein RADIALIS-like 1 [Cucumis melo])

HSP 1 Score: 119.4 bits (298), Expect = 2.1e-23
Identity = 55/60 (91.67%), Postives = 60/60 (100.00%), Query Frame = 0


Query: 1  MASMSAHGSGVWTAKQNKAFEEALAMYDQDTPDRWINVAKAIGGKTEEEVKRHYQVLVED 60
          MASMSAHGSGVWTAKQNKAFE+ALAMYD+DTPDRW+NVAKAIGGKTEEEVKRHYQ+L+ED
Sbjct: 1  MASMSAHGSGVWTAKQNKAFEKALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLED 60

[Close]

BLAST of CaUC02G031210 vs. NCBI nr
Match: KAA0036150.1 (protein RADIALIS-like 1 [Cucumis melo var. makuwa] >TYK01768.1 protein RADIALIS-like 1 [Cucumis melo var. makuwa])

HSP 1 Score: 117.5 bits (293), Expect = 7.8e-23
Identity = 57/80 (71.25%), Postives = 65/80 (81.25%), Query Frame = 0


Query: 1  MASMSAHGSGVWTAKQNKAFEEALAMYDQDTPDRWINVAKAIGGKTEEEVKRHYQVLVED 60
          MASMS+HGSG WT KQNKAFE+ALA+YDQDTPDRW+NVAKA+GGKT EEVKRHY +LVED
Sbjct: 1  MASMSSHGSGTWTVKQNKAFEKALAVYDQDTPDRWLNVAKAVGGKTAEEVKRHYALLVED 60

Query: 61 FLFLIEAQEAIIKCRTDDDG 81
            F IE+ +     RT  DG
Sbjct: 61 VKF-IESGQVPFPYRTSGDG 79

[Close]

BLAST of CaUC02G031210 vs. ExPASy Swiss-Prot
Match: F4JVB8 (Protein RADIALIS-like 1 OS=Arabidopsis thaliana OX=3702 GN=RL1 PE=2 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 1.4e-19
Identity = 48/92 (52.17%), Postives = 64/92 (69.57%), Query Frame = 0


Query: 2  ASMSAHGSGVWTAKQNKAFEEALAMYDQDTPDRWINVAKAIGGKTEEEVKRHYQVLVEDF 61
          +SMS+  SG WTAKQNKAFE+ALA YDQDTP+RW NVAK +GGKT EEVKRHY++LV+D 
Sbjct: 4  SSMSSQSSGSWTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELLVQDI 63

Query: 62 LFLIEAQEAIIKCRTD---DDGKIEEEKNEVQ 91
            +          RT     +G++ +E+  ++
Sbjct: 64 NSIENGHVPFPNYRTSGGCTNGRLSQEEKRMR 95

[Close]

BLAST of CaUC02G031210 vs. ExPASy Swiss-Prot
Match: Q9SIJ5 (Protein RADIALIS-like 2 OS=Arabidopsis thaliana OX=3702 GN=RL2 PE=2 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 5.5e-19
Identity = 43/58 (74.14%), Postives = 49/58 (84.48%), Query Frame = 0


Query: 3  SMSAHGSGVWTAKQNKAFEEALAMYDQDTPDRWINVAKAIGGKTEEEVKRHYQVLVED 61
          SMS++GSG WT KQNKAFE ALA+YDQDTPDRW NVA+A+GGKT EE KR Y +LV D
Sbjct: 5  SMSSYGSGSWTVKQNKAFERALAVYDQDTPDRWHNVARAVGGKTPEEAKRQYDLLVRD 62

[Close]

BLAST of CaUC02G031210 vs. ExPASy Swiss-Prot
Match: Q8GW75 (Protein RADIALIS-like 5 OS=Arabidopsis thaliana OX=3702 GN=RL5 PE=3 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 9.3e-19
Identity = 46/80 (57.50%), Postives = 57/80 (71.25%), Query Frame = 0


Query: 1  MASMSAHGSGVWTAKQNKAFEEALAMYDQDTPDRWINVAKAIGGKTEEEVKRHYQVLVED 60
          MAS S   S  WT+KQNK FE ALA+YD+DTPDRW NVAKA+G K+ EEVKRHY +LVED
Sbjct: 1  MASSSMSSSSSWTSKQNKMFERALAVYDKDTPDRWQNVAKAVGSKSAEEVKRHYDILVED 60

Query: 61 FLFLIEAQEAIIKCRTDDDG 81
           + + +    + K +T D G
Sbjct: 61 LMNIEQDLVPLPKYKTVDVG 80

[Close]

BLAST of CaUC02G031210 vs. ExPASy Swiss-Prot
Match: Q1A173 (Protein RADIALIS-like 6 OS=Arabidopsis thaliana OX=3702 GN=RL6 PE=2 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 2.3e-17
Identity = 42/62 (67.74%), Postives = 47/62 (75.81%), Query Frame = 0


Query: 1  MASMSAHGSGVWTAKQNKAFEEALAMYDQDTPDRWINVAKAIGGKTEEEVKRHYQVLVED 60
          MAS S      WT  QNK FE ALA+YD+DTPDRW NVAKA+GGKT EEVKRHY +LVED
Sbjct: 1  MASNSRSSISPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVED 60

Query: 61 FL 63
           +
Sbjct: 61 LI 62

[Close]

BLAST of CaUC02G031210 vs. ExPASy Swiss-Prot
Match: Q58FS3 (Transcription factor RADIALIS OS=Antirrhinum majus OX=4151 GN=RAD PE=1 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 6.7e-17
Identity = 43/83 (51.81%), Postives = 57/83 (68.67%), Query Frame = 0


Query: 5  SAHGSG-VWTAKQNKAFEEALAMYDQDTPDRWINVAKAIGGKTEEEVKRHYQVLVEDFLF 64
          S  GSG  W+AK+NKAFE ALA+YD+DTPDRW NVA+A+ G+T EEVK+HY++LVED  +
Sbjct: 3  STRGSGRPWSAKENKAFERALAVYDKDTPDRWANVARAVEGRTPEEVKKHYEILVEDIKY 62

Query: 65 LIEAQEAIIKCRTDDDGKIEEEK 87
          +   +      RT       +EK
Sbjct: 63 IESGKVPFPNYRTTGGNMKTDEK 85

[Close]

BLAST of CaUC02G031210 vs. ExPASy TrEMBL
Match: A0A6J1IA78 (protein RADIALIS-like 1 OS=Cucurbita maxima OX=3661 GN=LOC111471063 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 1.2e-24
Identity = 58/60 (96.67%), Postives = 59/60 (98.33%), Query Frame = 0


Query: 1  MASMSAHGSGVWTAKQNKAFEEALAMYDQDTPDRWINVAKAIGGKTEEEVKRHYQVLVED 60
          MASMSAHGSGVWTAKQNKAFEEALAMYDQD PDRW+NVAKAIGGKTEEEVKRHYQVLVED
Sbjct: 1  MASMSAHGSGVWTAKQNKAFEEALAMYDQDRPDRWLNVAKAIGGKTEEEVKRHYQVLVED 60

[Close]

BLAST of CaUC02G031210 vs. ExPASy TrEMBL
Match: A0A6J1GJG0 (protein RADIALIS-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111454835 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 1.2e-24
Identity = 58/60 (96.67%), Postives = 59/60 (98.33%), Query Frame = 0


Query: 1  MASMSAHGSGVWTAKQNKAFEEALAMYDQDTPDRWINVAKAIGGKTEEEVKRHYQVLVED 60
          MASMSAHGSGVWTAKQNKAFEEALAMYDQD PDRW+NVAKAIGGKTEEEVKRHYQVLVED
Sbjct: 1  MASMSAHGSGVWTAKQNKAFEEALAMYDQDRPDRWLNVAKAIGGKTEEEVKRHYQVLVED 60

[Close]

BLAST of CaUC02G031210 vs. ExPASy TrEMBL
Match: A0A5A7SYM4 (Protein RADIALIS-like 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold69G00290 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 3.4e-24
Identity = 56/60 (93.33%), Postives = 60/60 (100.00%), Query Frame = 0


Query: 1  MASMSAHGSGVWTAKQNKAFEEALAMYDQDTPDRWINVAKAIGGKTEEEVKRHYQVLVED 60
          MASMSAHGSGVWTAKQNKAFEEALAMYD+DTPDRW+NVAKAIGGKTEEEVKRHYQ+L+ED
Sbjct: 1  MASMSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLED 60

[Close]

BLAST of CaUC02G031210 vs. ExPASy TrEMBL
Match: A0A0A0K344 (SANT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G169070 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 7.6e-24
Identity = 55/60 (91.67%), Postives = 60/60 (100.00%), Query Frame = 0


Query: 1  MASMSAHGSGVWTAKQNKAFEEALAMYDQDTPDRWINVAKAIGGKTEEEVKRHYQVLVED 60
          MAS+SAHGSGVWTAKQNKAFEEALAMYD+DTPDRW+NVAKAIGGKTEEEVKRHYQ+L+ED
Sbjct: 1  MASLSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLED 60

[Close]

BLAST of CaUC02G031210 vs. ExPASy TrEMBL
Match: A0A1S3BGF6 (protein RADIALIS-like 1 OS=Cucumis melo OX=3656 GN=LOC103489576 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 1.0e-23
Identity = 55/60 (91.67%), Postives = 60/60 (100.00%), Query Frame = 0


Query: 1  MASMSAHGSGVWTAKQNKAFEEALAMYDQDTPDRWINVAKAIGGKTEEEVKRHYQVLVED 60
          MASMSAHGSGVWTAKQNKAFE+ALAMYD+DTPDRW+NVAKAIGGKTEEEVKRHYQ+L+ED
Sbjct: 1  MASMSAHGSGVWTAKQNKAFEKALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLED 60

[Close]

BLAST of CaUC02G031210 vs. TAIR 10
Match: AT4G39250.1 (RAD-like 1 )

HSP 1 Score: 97.1 bits (240), Expect = 1.0e-20
Identity = 48/92 (52.17%), Postives = 64/92 (69.57%), Query Frame = 0


Query: 2  ASMSAHGSGVWTAKQNKAFEEALAMYDQDTPDRWINVAKAIGGKTEEEVKRHYQVLVEDF 61
          +SMS+  SG WTAKQNKAFE+ALA YDQDTP+RW NVAK +GGKT EEVKRHY++LV+D 
Sbjct: 4  SSMSSQSSGSWTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELLVQDI 63

Query: 62 LFLIEAQEAIIKCRTD---DDGKIEEEKNEVQ 91
            +          RT     +G++ +E+  ++
Sbjct: 64 NSIENGHVPFPNYRTSGGCTNGRLSQEEKRMR 95

[Close]

BLAST of CaUC02G031210 vs. TAIR 10
Match: AT2G21650.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 95.1 bits (235), Expect = 3.9e-20
Identity = 43/58 (74.14%), Postives = 49/58 (84.48%), Query Frame = 0


Query: 3  SMSAHGSGVWTAKQNKAFEEALAMYDQDTPDRWINVAKAIGGKTEEEVKRHYQVLVED 61
          SMS++GSG WT KQNKAFE ALA+YDQDTPDRW NVA+A+GGKT EE KR Y +LV D
Sbjct: 5  SMSSYGSGSWTVKQNKAFERALAVYDQDTPDRWHNVARAVGGKTPEEAKRQYDLLVRD 62

[Close]

BLAST of CaUC02G031210 vs. TAIR 10
Match: AT1G19510.1 (RAD-like 5 )

HSP 1 Score: 94.4 bits (233), Expect = 6.6e-20
Identity = 46/80 (57.50%), Postives = 57/80 (71.25%), Query Frame = 0


Query: 1  MASMSAHGSGVWTAKQNKAFEEALAMYDQDTPDRWINVAKAIGGKTEEEVKRHYQVLVED 60
          MAS S   S  WT+KQNK FE ALA+YD+DTPDRW NVAKA+G K+ EEVKRHY +LVED
Sbjct: 1  MASSSMSSSSSWTSKQNKMFERALAVYDKDTPDRWQNVAKAVGSKSAEEVKRHYDILVED 60

Query: 61 FLFLIEAQEAIIKCRTDDDG 81
           + + +    + K +T D G
Sbjct: 61 LMNIEQDLVPLPKYKTVDVG 80

[Close]

BLAST of CaUC02G031210 vs. TAIR 10
Match: AT1G75250.1 (RAD-like 6 )

HSP 1 Score: 89.7 bits (221), Expect = 1.6e-18
Identity = 42/62 (67.74%), Postives = 47/62 (75.81%), Query Frame = 0


Query: 1  MASMSAHGSGVWTAKQNKAFEEALAMYDQDTPDRWINVAKAIGGKTEEEVKRHYQVLVED 60
          MAS S      WT  QNK FE ALA+YD+DTPDRW NVAKA+GGKT EEVKRHY +LVED
Sbjct: 1  MASNSRSSISPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVED 60

Query: 61 FL 63
           +
Sbjct: 61 LI 62

[Close]

BLAST of CaUC02G031210 vs. TAIR 10
Match: AT1G75250.2 (RAD-like 6 )

HSP 1 Score: 89.7 bits (221), Expect = 1.6e-18
Identity = 42/62 (67.74%), Postives = 47/62 (75.81%), Query Frame = 0


Query: 1  MASMSAHGSGVWTAKQNKAFEEALAMYDQDTPDRWINVAKAIGGKTEEEVKRHYQVLVED 60
          MAS S      WT  QNK FE ALA+YD+DTPDRW NVAKA+GGKT EEVKRHY +LVED
Sbjct: 1  MASNSRSSISPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVED 60

Query: 61 FL 63
           +
Sbjct: 61 LI 62

The following BLAST results are available for this feature:

BLAST of CaUC02G031210 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022952073.1	2.4e-24	96.67	protein RADIALIS-like 1 [Cucurbita moschata] >XP_022972518.1 protein RADIALIS-li...	[more]
KAA0036170.1	7.1e-24	93.33	protein RADIALIS-like 1 [Cucumis melo var. makuwa]	[more]
XP_004151116.1	1.6e-23	91.67	protein RADIALIS-like 1 [Cucumis sativus] >KGN44075.1 hypothetical protein Csa_0...	[more]
XP_008447025.1	2.1e-23	91.67	PREDICTED: protein RADIALIS-like 1 [Cucumis melo]	[more]
KAA0036150.1	7.8e-23	71.25	protein RADIALIS-like 1 [Cucumis melo var. makuwa] >TYK01768.1 protein RADIALIS-...	[more]

BLAST of CaUC02G031210 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JVB8	1.4e-19	52.17	Protein RADIALIS-like 1 OS=Arabidopsis thaliana OX=3702 GN=RL1 PE=2 SV=1	[more]
Q9SIJ5	5.5e-19	74.14	Protein RADIALIS-like 2 OS=Arabidopsis thaliana OX=3702 GN=RL2 PE=2 SV=1	[more]
Q8GW75	9.3e-19	57.50	Protein RADIALIS-like 5 OS=Arabidopsis thaliana OX=3702 GN=RL5 PE=3 SV=1	[more]
Q1A173	2.3e-17	67.74	Protein RADIALIS-like 6 OS=Arabidopsis thaliana OX=3702 GN=RL6 PE=2 SV=1	[more]
Q58FS3	6.7e-17	51.81	Transcription factor RADIALIS OS=Antirrhinum majus OX=4151 GN=RAD PE=1 SV=1	[more]

BLAST of CaUC02G031210 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IA78	1.2e-24	96.67	protein RADIALIS-like 1 OS=Cucurbita maxima OX=3661 GN=LOC111471063 PE=4 SV=1	[more]
A0A6J1GJG0	1.2e-24	96.67	protein RADIALIS-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111454835 PE=4 SV=1	[more]
A0A5A7SYM4	3.4e-24	93.33	Protein RADIALIS-like 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A0A0K344	7.6e-24	91.67	SANT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G169070 PE=4 S...	[more]
A0A1S3BGF6	1.0e-23	91.67	protein RADIALIS-like 1 OS=Cucumis melo OX=3656 GN=LOC103489576 PE=4 SV=1	[more]

BLAST of CaUC02G031210 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G39250.1	1.0e-20	52.17	RAD-like 1	[more]
AT2G21650.1	3.9e-20	74.14	Homeodomain-like superfamily protein	[more]
AT1G19510.1	6.6e-20	57.50	RAD-like 5	[more]
AT1G75250.1	1.6e-18	67.74	RAD-like 6	[more]
AT1G75250.2	1.6e-18	67.74	RAD-like 6	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 8..60 e-value: 3.6E-7 score: 39.8
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 10..58 score: 6.318553
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 12..58 e-value: 1.64426E-5 score: 37.555
None	No IPR available	GENE3D	1.10.10.60		coord: 11..57 e-value: 2.9E-21 score: 77.2
None	No IPR available	PANTHER	PTHR43952:SF12	PROTEIN RADIALIS-LIKE 6	coord: 1..67
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 10..57 e-value: 2.1E-6 score: 27.9
IPR044636	Transcription factor RADIALIS-like	PANTHER	PTHR43952	MYB FAMILY TRANSCRIPTION FACTOR-RELATED	coord: 1..67
IPR017884	SANT domain	PROSITE	PS51293	SANT	coord: 7..54 score: 9.582573
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 10..62

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC02G031210.1	CaUC02G031210.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003700	DNA-binding transcription factor activity