CaUC02G029750 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTTCGGGCGAAACCCATTCCCAGGGTTGTGCATGTACCCCACTGGGTAAAATAAAATCTTAAAAATATCATAAAGGGAATCCAATGTATATTTTAAGGTTATAATATTACGATTTTGTACTTGTTTCATTTCGGAAAAGACATTTAGTCGTTTAAAGTTAACTTTTATCAAATTTGTTATATAATAATAGTAATAATACTTTCTTTTTCAAAAGACGTGAATATATTTTAAAATCTTACCATCAATACTTTTTTTTCTTCTTTCTTTAAAAAATCAACAATAAACTAATAGTATAATTTTTTTTTTTTTTTTTTTGACATTTATTAAAAGTATATTGACAAAAAGACCAAATTGGTATTTTAAAATATGATGATAGGTATATTGTGCTAATATAATTATGTCTTAAGTAATTTTTAAATTGTATATTATGTTTAAGTCCAAGGTTTTAAATGTCGATATCTATTTTATGGAATTATAATATTAGTAAAAGTATATATAAAATGTCAATAATGTTTGTTGTTGTTTTTTTTTTTTTTTTTTAAATTTGTTGTATTTCATCACGATGATTCATCTTTCATGTCAATTAGGGGTGTTCCTTCCAATCGTAGAAATTGAACCGAAACCAAAACCGAAACAGAACGATAATGCATAGAAACCGAATTCTACGGTTTGGTTCGGTTTGTTTAAATGTAAAACTGTTTTTTTGTGGTTCGATTCGGTTTGGGCCATGAAGTTGAAACCAAAATCGAATCGATTATAATATTATTAAAATATAGGTTAAAAAACACTTTTAATCCCTGAAAAGTAAGGAAAGGAAGCGAGAGCGAGAGTGAGAGTGAGAGCACACATGTCATTTTATCATAAACATCCTCTATCTCTCTCGCTCTCACTCTCGCTTATTTTGAATTATAGGATGAAAAGAGAAGGAAAATAAATAAATAAACCACAAAACCGAACCGCATCGTATATATGTCGTTCGGTTCAAGCTAAACATGCAGTTTAGTTCGATTTCTGTATAAAAGAATTTCAAAATTTGTGGTTCGGTTTGGTTTAAGCCCCAAACCGAACTGAACTGTGAACACCCATAATATCAATATCTAACCCGAACATAAATACGTTGATGAAAATAACACTTTCATCACATTCATCTTAAACAAACTCTAAATTTTTTCTTCTTTCTTCCTAACCAAACTCTTTCCATTTCTTCATTCTATCTTATTTCTTTAGGAGATACCTAAAAAAGTTGTATACATTGCTTAGTAATCAACGAACATTCCCCACTGAAAGCAAAGAAAAATCAGTGTTGGAGTTGGACTAAAAACCCTAAAAAATGAGAAGCGTTTCATTTTAGCAGCCAAATGGTATAATGATGGAAGCCTGTGGGCTGGGCCTAGCCAAAAGCCCACTACCATAATAACAAACAAAGGCCCGTCCACCACCGTCATTGGGCTGAATTGTCAAATATACACACAAATGGGACTATTTTGCAAATTATATTTCACAAATGTCATCTTTTTAGAGGAATTATGGTATATAGTTATGAATAAATGCTTTTCTTTATTAGAGCTTTTGCGAGTTTGAATACCATAATTTTAGGAGAAGAGTGTGAATACTTTTCTTTCTACTTATCCAACTCTTTGAGTGTAGTGTTTATTGAGTCTAATAGCGATAAATGATGTAACTCTTCAAGATCTTCAAGATGGGGCATGATTCTTCGAGTGCATGTGTCTTTTGAGTCAATAGATACAATTGATATTAATGTATTGTGAATATCACAAACTCAAGGGAGGTAGTTACATACTGAACATTTGCATTCTTTTACTTGTGGGGAAGATACATGCGTACAATAATAATAATAAATACGTTTGCTTACAATATTAAAAAAATTACTTAAAAAAAGTTAGTACAACAAATTAATTCTTTTATAAATTGTAAATAAGTTTATAAAAGGGAAATTATCTTAAATGGCAAAACTGTTGAAAATATTTACAACTAATAACAAAATACACAGTCTATTTGCGATAAACCGGGATAGACAATGAAATTTTGCTATATTTATAAATATTTTGGTTGTTTTTGTTATATTTGAAAAGAACCATTTATAAAATCGAGTTTAGAAAATTTTAACACAAAAAAGTTATAAAGAAAAAACAAATATTTTGGAGACAAAAAGGTTATTAAAATTTTCAAATACTGAGGATGGACAAAAATTTGAAAGAGAACATTTTAGTAAGGGAAACAAAGTCAGAAAGAGGAATAAAATTTTAGAGAGATAAAAAATACAGATAATTAAAGAATTTTTTTTCTTTTGACAAAAAGACTAGAAAAAATGAGAAAAATAAAAGAAAAAGAATAGCCTAGAAGGACGAATAAAATAAAATTATTTTTATATTATTTCTCTGATGACATCAAATCTTATTTAAATTCTACATTGATTTTGGATACAATTTGAAATAAGATTGAGTTATAACATAGATAATTTAACTTATAAGTTTGGTTTTGTTTTACTTATTATATTGTAGTTGTGAAAAATAAAATATTTGTATATGTTATAGTATATGTTTTCACTTAATTTTTTGACAGTTGAATATTATTTTAAAACTTTAAATTCAAAATTTTGACATTTTCACATGCAATGCATGTATTCTATGGAAAAATAGGGAAAAAAAAAGATATATATAATTTTTTGAAACTAGGTTAGAACTTTTAATTGGCAACCAAACACCCGAGTAAAGGAATGAGGAAAGGGAGCAAACAACTTTGATTTGTAATTGCTTTTGAGGAGATAGAAGCAATTACAGGCAAACTTTAACCTTTTTTTGTCATTCTCAAAATCACTCTATGACATGGTTTTAATCGTTCAAAACTAATTTTGATGATATGAAAATTACATATAAAAATTAAAGTTAAATATTAAATTAATTTTGAGTGATTAATCACTTTCAAATATTAAATATGTACTATTTAGGATTGAATTTTTATAAATCAAAATTTAAAAATTAAATTGTTAATATAAGGGCGAAAGTTTAGGGATAAAAAGGTAAATTTCAACCATCAACAATCCAATTGAAAGGTAAAAGGTGTGCTGTAAAAAAAGAAAAAAAACTGCACAGTACAAAATATAGAACTCTCTAACTAAATGACAGCCATGGATTCCATCCAATTCCTTATCCATAATTTTCTCTTATCTCAGATTTTGCATACCCCACCTTCCAAAACGACATCGTTTGCCCTCTCCAAACCCTTCTTCCTCCACACTTCCCTTCTCCTTCTTCTTCTTCACAATCACAACCACATCCCCTTCCACCTCCGCCGTGCCTCCCTCCATGGACGCCGTCTTCGTAAACCAATCTCTCTCTCGCCTTAAACTTTCCCCTAAGCCCCCTCTCCCATTCCCCCCTTCTTCCTCTCGAATCCCCCATCTCAATCTCCGCCGCAACCTCAAACATTTCACCCCTTCCTACGCCGTACAAAGCGATCAACCCCTCACACAACAAACCCAGAAATCAGAAGACGATGAATCGTACGGCGAAGTCGATGGAATCATCGGCAGTCGTGCTCTGTCCGACGCTACTGGCATGGAGTATCTAATTAAATGGAAAGATGGGCATTCCCCATCATGGGTTCCTTCCGATTTCATCGCTAAAGATGTTGTCGCCGAGTACGAAACTCCTTGGTGGACCGCCGCCAAGAAAGCCGACGAATCTGCTTTGAAATCGATGATAGATTCTGCGGACGGACGAGATTTCGACGCTGTGGATGAAGATGGGAGGACCGCTCTTCTGTTTGTTGCTGGACTTGGGTCTAATCCGTGTGTGAGAATGTTAGCGGAAGCCGGTGCGAATCTCGATCACCGTGACAACAGCGGTGGGTTTACAGCGTTGCATATGGCAGCTGGGTATGTGAAACCAGAGACGGTGGAGTTGTTGGTGGAATTGGGAGCGGATCCGGAAATTGAGGACGATAAGGGTCGGACGCCATTGGTGTTGGCAAGGGAGATATTGAAAGCGACGCCGAGGGTTCAGTTTATGAGGAGATTGGGGTTGGAGAGAGTGATCGGTGCGGTGGAGAGGGTGGTTTATGAGTATGCGGAGGTGGAACAATTGCTGGAGAAGAGAGGGAAGGGGGAGAATTTGGAGTATTTGGTAAAATGGAAAGACGGAGAGGATAATGAATGGGTGAAAGTGGGGTTGATTGCGGAGGATTTGGTGGCGGATTTCGAAGCAGGGTTGGAGTATGCGGTGGCGGAGGCGGTGGTCGGAAAAAGAGTTGGAGATGATGGGAAGATGGAGTATCTTGTTAAATGGACGGATATACAAGATGCCACGTGGGAGCCTCAGGCTAATGTGGATCCTGATTTGGTTAACGAGTTTGAGAAGGCCCAGGCCCAACCCCAGGCCCAATCCAGTAATGGTAGTGCCCTTTGAAAAAGCCTTTTCCCCTCCAAGTATGTATTTAAACTAGGGATTTTTTTTAAGATATTGTTATTG ATGCTTCGGGCGAAACCCATTCCCAGGGTTGTGCATGTACCCCACTGGCCATGGATTCCATCCAATTCCTTATCCATAATTTTCTCTTATCTCAGATTTTGCATACCCCACCTTCCAAAACGACATCGTTTGCCCTCTCCAAACCCTTCTTCCTCCACACTTCCCTTCTCCTTCTTCTTCTTCACAATCACAACCACATCCCCTTCCACCTCCGCCGTGCCTCCCTCCATGGACGCCGTCTTCGTAAACCAATCTCTCTCTCGCCTTAAACTTTCCCCTAAGCCCCCTCTCCCATTCCCCCCTTCTTCCTCTCGAATCCCCCATCTCAATCTCCGCCGCAACCTCAAACATTTCACCCCTTCCTACGCCGTACAAAGCGATCAACCCCTCACACAACAAACCCAGAAATCAGAAGACGATGAATCGTACGGCGAAGTCGATGGAATCATCGGCAGTCGTGCTCTGTCCGACGCTACTGGCATGGAGTATCTAATTAAATGGAAAGATGGGCATTCCCCATCATGGGTTCCTTCCGATTTCATCGCTAAAGATGTTGTCGCCGAGTACGAAACTCCTTGGTGGACCGCCGCCAAGAAAGCCGACGAATCTGCTTTGAAATCGATGATAGATTCTGCGGACGGACGAGATTTCGACGCTGTGGATGAAGATGGGAGGACCGCTCTTCTGTTTGTTGCTGGACTTGGGTCTAATCCGTGTGTGAGAATGTTAGCGGAAGCCGGTGCGAATCTCGATCACCGTGACAACAGCGGTGGGTTTACAGCGTTGCATATGGCAGCTGGGTATGTGAAACCAGAGACGGTGGAGTTGTTGGTGGAATTGGGAGCGGATCCGGAAATTGAGGACGATAAGGGTCGGACGCCATTGGTGTTGGCAAGGGAGATATTGAAAGCGACGCCGAGGGTTCAGTTTATGAGGAGATTGGGGTTGGAGAGAGTGATCGGTGCGGTGGAGAGGGTGGTTTATGAGTATGCGGAGGTGGAACAATTGCTGGAGAAGAGAGGGAAGGGGGAGAATTTGGAGTATTTGGTAAAATGGAAAGACGGAGAGGATAATGAATGGGTGAAAGTGGGGTTGATTGCGGAGGATTTGGTGGCGGATTTCGAAGCAGGGTTGGAGTATGCGGTGGCGGAGGCGGTGGTCGGAAAAAGAGTTGGAGATGATGGGAAGATGGAGTATCTTGTTAAATGGACGGATATACAAGATGCCACGTGGGAGCCTCAGGCTAATGTGGATCCTGATTTGGTTAACGAGTTTGAGAAGGCCCAGGCCCAACCCCAGGCCCAATCCAGTAATGGTAGTGCCCTTTGAAAAAGCCTTTTCCCCTCCAAGTATGTATTTAAACTAGGGATTTTTTTTAAGATATTGTTATTG ATGCTTCGGGCGAAACCCATTCCCAGGGTTGTGCATGTACCCCACTGGCCATGGATTCCATCCAATTCCTTATCCATAATTTTCTCTTATCTCAGATTTTGCATACCCCACCTTCCAAAACGACATCGTTTGCCCTCTCCAAACCCTTCTTCCTCCACACTTCCCTTCTCCTTCTTCTTCTTCACAATCACAACCACATCCCCTTCCACCTCCGCCGTGCCTCCCTCCATGGACGCCGTCTTCGTAAACCAATCTCTCTCTCGCCTTAAACTTTCCCCTAAGCCCCCTCTCCCATTCCCCCCTTCTTCCTCTCGAATCCCCCATCTCAATCTCCGCCGCAACCTCAAACATTTCACCCCTTCCTACGCCGTACAAAGCGATCAACCCCTCACACAACAAACCCAGAAATCAGAAGACGATGAATCGTACGGCGAAGTCGATGGAATCATCGGCAGTCGTGCTCTGTCCGACGCTACTGGCATGGAGTATCTAATTAAATGGAAAGATGGGCATTCCCCATCATGGGTTCCTTCCGATTTCATCGCTAAAGATGTTGTCGCCGAGTACGAAACTCCTTGGTGGACCGCCGCCAAGAAAGCCGACGAATCTGCTTTGAAATCGATGATAGATTCTGCGGACGGACGAGATTTCGACGCTGTGGATGAAGATGGGAGGACCGCTCTTCTGTTTGTTGCTGGACTTGGGTCTAATCCGTGTGTGAGAATGTTAGCGGAAGCCGGTGCGAATCTCGATCACCGTGACAACAGCGGTGGGTTTACAGCGTTGCATATGGCAGCTGGGTATGTGAAACCAGAGACGGTGGAGTTGTTGGTGGAATTGGGAGCGGATCCGGAAATTGAGGACGATAAGGGTCGGACGCCATTGGTGTTGGCAAGGGAGATATTGAAAGCGACGCCGAGGGTTCAGTTTATGAGGAGATTGGGGTTGGAGAGAGTGATCGGTGCGGTGGAGAGGGTGGTTTATGAGTATGCGGAGGTGGAACAATTGCTGGAGAAGAGAGGGAAGGGGGAGAATTTGGAGTATTTGGTAAAATGGAAAGACGGAGAGGATAATGAATGGGTGAAAGTGGGGTTGATTGCGGAGGATTTGGTGGCGGATTTCGAAGCAGGGTTGGAGTATGCGGTGGCGGAGGCGGTGGTCGGAAAAAGAGTTGGAGATGATGGGAAGATGGAGTATCTTGTTAAATGGACGGATATACAAGATGCCACGTGGGAGCCTCAGGCTAATGTGGATCCTGATTTGGTTAACGAGTTTGAGAAGGCCCAGGCCCAACCCCAGGCCCAATCCAGTAATGGTAGTGCCCTTTGA MLRAKPIPRVVHVPHWPWIPSNSLSIIFSYLRFCIPHLPKRHRLPSPNPSSSTLPFSFFFFTITTTSPSTSAVPPSMDAVFVNQSLSRLKLSPKPPLPFPPSSSRIPHLNLRRNLKHFTPSYAVQSDQPLTQQTQKSEDDESYGEVDGIIGSRALSDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSMIDSADGRDFDAVDEDGRTALLFVAGLGSNPCVRMLAEAGANLDHRDNSGGFTALHMAAGYVKPETVELLVELGADPEIEDDKGRTPLVLAREILKATPRVQFMRRLGLERVIGAVERVVYEYAEVEQLLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVADFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPQANVDPDLVNEFEKAQAQPQAQSSNGSAL Homology
BLAST of CaUC02G029750 vs. NCBI nr
Match: XP_038888741.1 (signal recognition particle 43 kDa protein, chloroplastic [Benincasa hispida]) HSP 1 Score: 685.3 bits (1767), Expect = 3.6e-193 Identity = 349/375 (93.07%), Postives = 358/375 (95.47%), Query Frame = 0
BLAST of CaUC02G029750 vs. NCBI nr
Match: XP_008447899.1 (PREDICTED: signal recognition particle 43 kDa protein, chloroplastic [Cucumis melo]) HSP 1 Score: 631.3 bits (1627), Expect = 6.1e-177 Identity = 318/358 (88.83%), Postives = 336/358 (93.85%), Query Frame = 0
BLAST of CaUC02G029750 vs. NCBI nr
Match: XP_004153574.1 (signal recognition particle 43 kDa protein, chloroplastic [Cucumis sativus]) HSP 1 Score: 627.1 bits (1616), Expect = 1.2e-175 Identity = 316/355 (89.01%), Postives = 333/355 (93.80%), Query Frame = 0
BLAST of CaUC02G029750 vs. NCBI nr
Match: XP_022928488.1 (signal recognition particle 43 kDa protein, chloroplastic-like [Cucurbita moschata]) HSP 1 Score: 604.7 bits (1558), Expect = 6.2e-169 Identity = 323/423 (76.36%), Postives = 352/423 (83.22%), Query Frame = 0
BLAST of CaUC02G029750 vs. NCBI nr
Match: XP_023529738.1 (signal recognition particle 43 kDa protein, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 599.4 bits (1544), Expect = 2.6e-167 Identity = 311/375 (82.93%), Postives = 333/375 (88.80%), Query Frame = 0
BLAST of CaUC02G029750 vs. ExPASy Swiss-Prot
Match: O22265 (Signal recognition particle 43 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CAO PE=1 SV=2) HSP 1 Score: 407.5 bits (1046), Expect = 1.9e-112 Identity = 220/362 (60.77%), Postives = 275/362 (75.97%), Query Frame = 0
BLAST of CaUC02G029750 vs. ExPASy Swiss-Prot
Match: Q8LSQ2 (Probable signal recognition particle 43 kDa protein, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0131900 PE=2 SV=1) HSP 1 Score: 337.0 bits (863), Expect = 3.1e-91 Identity = 188/374 (50.27%), Postives = 245/374 (65.51%), Query Frame = 0
BLAST of CaUC02G029750 vs. ExPASy Swiss-Prot
Match: Q06527 (Ankyrin homolog OS=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / NCIMB 10441 / D) OX=572477 GN=Alvin_1094 PE=3 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 8.8e-09 Identity = 49/127 (38.58%), Postives = 62/127 (48.82%), Query Frame = 0
BLAST of CaUC02G029750 vs. ExPASy Swiss-Prot
Match: Q9VL06 (E3 ubiquitin-protein ligase Ufd4 OS=Drosophila melanogaster OX=7227 GN=Ufd4 PE=2 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 1.9e-08 Identity = 36/105 (34.29%), Postives = 61/105 (58.10%), Query Frame = 0
BLAST of CaUC02G029750 vs. ExPASy Swiss-Prot
Match: Q69ZR2 (E3 ubiquitin-protein ligase HECTD1 OS=Mus musculus OX=10090 GN=Hectd1 PE=1 SV=2) HSP 1 Score: 61.2 bits (147), Expect = 3.3e-08 Identity = 33/103 (32.04%), Postives = 58/103 (56.31%), Query Frame = 0
BLAST of CaUC02G029750 vs. ExPASy TrEMBL
Match: A0A1S3BHX6 (signal recognition particle 43 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103490246 PE=4 SV=1) HSP 1 Score: 631.3 bits (1627), Expect = 3.0e-177 Identity = 318/358 (88.83%), Postives = 336/358 (93.85%), Query Frame = 0
BLAST of CaUC02G029750 vs. ExPASy TrEMBL
Match: A0A0A0K634 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G018780 PE=4 SV=1) HSP 1 Score: 627.1 bits (1616), Expect = 5.6e-176 Identity = 316/355 (89.01%), Postives = 333/355 (93.80%), Query Frame = 0
BLAST of CaUC02G029750 vs. ExPASy TrEMBL
Match: A0A6J1EP65 (signal recognition particle 43 kDa protein, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111435281 PE=4 SV=1) HSP 1 Score: 604.7 bits (1558), Expect = 3.0e-169 Identity = 323/423 (76.36%), Postives = 352/423 (83.22%), Query Frame = 0
BLAST of CaUC02G029750 vs. ExPASy TrEMBL
Match: A0A6J1JM92 (signal recognition particle 43 kDa protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111486468 PE=4 SV=1) HSP 1 Score: 595.1 bits (1533), Expect = 2.4e-166 Identity = 316/412 (76.70%), Postives = 349/412 (84.71%), Query Frame = 0
BLAST of CaUC02G029750 vs. ExPASy TrEMBL
Match: A0A6J1C248 (signal recognition particle 43 kDa protein, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111007575 PE=4 SV=1) HSP 1 Score: 552.0 bits (1421), Expect = 2.3e-153 Identity = 286/370 (77.30%), Postives = 317/370 (85.68%), Query Frame = 0
BLAST of CaUC02G029750 vs. TAIR 10
Match: AT2G47450.1 (chloroplast signal recognition particle component (CAO) ) HSP 1 Score: 407.5 bits (1046), Expect = 1.3e-113 Identity = 220/362 (60.77%), Postives = 275/362 (75.97%), Query Frame = 0
BLAST of CaUC02G029750 vs. TAIR 10
Match: AT4G35450.3 (ankyrin repeat-containing protein 2 ) HSP 1 Score: 63.5 bits (153), Expect = 4.8e-10 Identity = 42/120 (35.00%), Postives = 66/120 (55.00%), Query Frame = 0
BLAST of CaUC02G029750 vs. TAIR 10
Match: AT4G35450.4 (ankyrin repeat-containing protein 2 ) HSP 1 Score: 63.5 bits (153), Expect = 4.8e-10 Identity = 42/120 (35.00%), Postives = 66/120 (55.00%), Query Frame = 0
BLAST of CaUC02G029750 vs. TAIR 10
Match: AT4G35450.2 (ankyrin repeat-containing protein 2 ) HSP 1 Score: 63.5 bits (153), Expect = 4.8e-10 Identity = 42/120 (35.00%), Postives = 66/120 (55.00%), Query Frame = 0
BLAST of CaUC02G029750 vs. TAIR 10
Match: AT4G35450.1 (ankyrin repeat-containing protein 2 ) HSP 1 Score: 63.5 bits (153), Expect = 4.8e-10 Identity = 42/120 (35.00%), Postives = 66/120 (55.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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