CaUC02G029650 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAATTAAAGAGTAAAGATGGCTTGGTTTTTTACCTTTCTTCTTTTCTTTATTGTCTCTTCAGCTAATGCTTGTGATCGTTGTATTTTTCAATCTAAGGCCGCTCATTACTATGAGGATACACCTACTTCATGTAAATATGTGTCTTTTAATTTATTTTCACTTCTATGTTTTCAATTTTGAATTGGGTTAATTAATCCAAAATAATGTCATTTATGTATATCATACAATTTTAGTCCTAAGATGAATGTTTAAATGATGAATTTATTGAGAGTGTGTGATTGAGTTATGATATTATTATAGATGGAGGTGCATGTGGGTATGAAAATTTGGCCTTGGAAATGTCTCGAGGCTATTTTGCAGCTGCTGTCCCTTCTCTCCACCGACAAGGAATGGGTTGTGGTGCCTGCTACCAGGTATATTCATATATGATATTAAATTTTGTTGACGTGTCGATATTTCTATAGTTTTATAGATTTGATATAGACAATATGAATAAAAAAAAGATTTGGGTTCAATCCATGATATCTACCTATCTAGAATTTATTATTCTACGAGTTTTCTTGACACTAAAATGTTGTAGGATTAAGCGTGGTGTCTCATAAGATTAGTCGAGGTGTACATAAGTTCACCTAGACAATCACGACTACCAAAAAAAAGTGGGGTGAAAATCAACATTTCTATTATATCGTATAAAAATCCAATGAAACGCAAAAAAATAAAACAAAAAAAATGTTACTAATATAAATATAATATAAGTATTTACTTGTTTAAAAAGCACGAAAGGTTTATTTATTAATTTATATATTTTTTAATTTTTTTATAATTATTTTTAGAATATTCATTGATATTTTATTAATATTTTTTATTGGCACCAACGTTTTAAACTGTTATATATATATATAGTTTTCTTTTGGAATGCTTCGATCACTTTTCAAGTGTTTGTTTTGAAAAAATAAAATTTGTAGTATTGGACAAGAACTCAAATCAACAATTAAAATATGATTTTTCGAAATAAGTTATGTTAAATGAAACAATTGAATTCAAATTTTAGCGTTTCATTGAGAATTTCTCTTAAATTTTCATAATATATGAAAGTAAGAATAATACCCTTGCATTACTTTCACTTTTCCCATGGCCTGTTGCCACCCTTCGACAACCACGACTATCTCACCGTCAACGACCACTACAGTCAATTTTAATATTTTAAATACAAATTTGAAATTAATAGTGTTTAATTTATAGTTGTCCTTCATAGTTATTTAACATTTGAAGAAGAGTTTTGAATATAGGGCAAATCATACCGACTTGTGTGTAAAAGAAATAAGTGCAACCAAACATATATATCAATGTTTTTAAAGAAAATGCATTATATTTTCTAAAAACACTTTTTTTTTTCACATAAACCGATCCTTTGTCTCTTAATTTAAATTTGCTTCTATTTTAGTTTTTTGTTCTCAACAACTTTATTGACTATGAGTATATTATTTTTCTCAGGTAAGATGCAAGAATGCAACATTGTGTAACACAATAGGGACCAAAGTAGTTTTGACAGATCAAAATTCTGATAACAGAACAGATTTTGTTCTTAGTAAAAAAGCTTTTTCTACAATGGCTTTAAAGGGCAAAGGTCAAGAACTTTTGAAAACTGGAATGGTTGATATTGAATACAAGAGGTAAATCATATAATATACTTACTACTATATATATATATAATTAATTGATATATTATATGATACCATCAACGAGAATTATTATTTTAATTTTTTCGACTTTCATTTTGTAGGATACCTTGTGAATACAATAAAAATTTATTAATACAAGTAGTAGAATGGAGCCACAAACCATATTATTTGGCTATTAAATTCCTCTACCAAGGAGGTCAAACCGACATAACTGCGGTCAACATAGCAGCTCAGGTTAGCTAAGAATCGATTTGGGATGATTTTTCAAGTGGTTAAAAAAATATTATGAAAAATTATATTTTAAGTTCTTGAAGTTAAGTTTAGTATCACTTTGATCCCTTTATTTTCAAACTTTGACATTTTTGTAATTTTTAGTATGTAGCATTTTGGTTTCTATTGTCAATTAAAAATATATTTTTTATTTTCCATCCTCCTAATCTTTTCCATCTCCATCCATGGTTGTAACTTTTTTTTCTATCTACTCTCCTTCTTTGTTTCTTCCTCTTTTTACGATGATTTTTTTAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTCTTAAGATACTTTAAGGAAAAATATATGTACATACATATATATATATATATATATATTCTTAAACCTAAGTTGATATATTATTATTTAACATGAGTTTTTGTATGCATTGATTAATTTGGTATAGGATGGTTCTGGAGAGTGGCAATACATGAAAAGAAACTATGGAGCCATTTGGGATACAAATAAAGTGCCAGAAGGGGCAATTAAGTTAGTGGTGATTGTAGTTTCAGGGTACAAAAATGGGAGAGGGATCATGATGAGTTATGCACTTCCTAGTGATTGGAAAAATGGAGAAATTTATGATACTGGAATTCAAATCAAAGATATTGCTTCTGAAGCTTGCAATCCTTGGCAATGTGGTGACCAACCATGGAAATGATTATCAAACCTAATTATAAGTTTTCACTAGTATGTATTCATAAAGTTTTAGTTACAAATAAATGTGTGTATATGTATTTCCCTACTGTTTGTGTTGTGATAGGATTCAAGGAATTTCAGTACAGTTGTTCTACCATATTAAATAAATGAAATGAAATAT AAATTAAAGAGTAAAGATGGCTTGGTTTTTTACCTTTCTTCTTTTCTTTATTGTCTCTTCAGCTAATGCTTGTGATCGTTGTATTTTTCAATCTAAGGCCGCTCATTACTATGAGGATACACCTACTTCATATGGAGGTGCATGTGGGTATGAAAATTTGGCCTTGGAAATGTCTCGAGGCTATTTTGCAGCTGCTGTCCCTTCTCTCCACCGACAAGGAATGGGTTGTGGTGCCTGCTACCAGGTAAGATGCAAGAATGCAACATTGTGTAACACAATAGGGACCAAAGTAGTTTTGACAGATCAAAATTCTGATAACAGAACAGATTTTGTTCTTAGTAAAAAAGCTTTTTCTACAATGGCTTTAAAGGGCAAAGGTCAAGAACTTTTGAAAACTGGAATGGTTGATATTGAATACAAGAGGATACCTTGTGAATACAATAAAAATTTATTAATACAAGTAGTAGAATGGAGCCACAAACCATATTATTTGGCTATTAAATTCCTCTACCAAGGAGGTCAAACCGACATAACTGCGGTCAACATAGCAGCTCAGGATGGTTCTGGAGAGTGGCAATACATGAAAAGAAACTATGGAGCCATTTGGGATACAAATAAAGTGCCAGAAGGGGCAATTAAGTTAGTGGTGATTGTAGTTTCAGGGTACAAAAATGGGAGAGGGATCATGATGAGTTATGCACTTCCTAGTGATTGGAAAAATGGAGAAATTTATGATACTGGAATTCAAATCAAAGATATTGCTTCTGAAGCTTGCAATCCTTGGCAATGTGGTGACCAACCATGGAAATGATTATCAAACCTAATTATAAGTTTTCACTAGTATGTATTCATAAAGTTTTAGTTACAAATAAATGTGTGTATATGTATTTCCCTACTGTTTGTGTTGTGATAGGATTCAAGGAATTTCAGTACAGTTGTTCTACCATATTAAATAAATGAAATGAAATAT ATGGCTTGGTTTTTTACCTTTCTTCTTTTCTTTATTGTCTCTTCAGCTAATGCTTGTGATCGTTGTATTTTTCAATCTAAGGCCGCTCATTACTATGAGGATACACCTACTTCATATGGAGGTGCATGTGGGTATGAAAATTTGGCCTTGGAAATGTCTCGAGGCTATTTTGCAGCTGCTGTCCCTTCTCTCCACCGACAAGGAATGGGTTGTGGTGCCTGCTACCAGGTAAGATGCAAGAATGCAACATTGTGTAACACAATAGGGACCAAAGTAGTTTTGACAGATCAAAATTCTGATAACAGAACAGATTTTGTTCTTAGTAAAAAAGCTTTTTCTACAATGGCTTTAAAGGGCAAAGGTCAAGAACTTTTGAAAACTGGAATGGTTGATATTGAATACAAGAGGATACCTTGTGAATACAATAAAAATTTATTAATACAAGTAGTAGAATGGAGCCACAAACCATATTATTTGGCTATTAAATTCCTCTACCAAGGAGGTCAAACCGACATAACTGCGGTCAACATAGCAGCTCAGGATGGTTCTGGAGAGTGGCAATACATGAAAAGAAACTATGGAGCCATTTGGGATACAAATAAAGTGCCAGAAGGGGCAATTAAGTTAGTGGTGATTGTAGTTTCAGGGTACAAAAATGGGAGAGGGATCATGATGAGTTATGCACTTCCTAGTGATTGGAAAAATGGAGAAATTTATGATACTGGAATTCAAATCAAAGATATTGCTTCTGAAGCTTGCAATCCTTGGCAATGTGGTGACCAACCATGGAAATGA MAWFFTFLLFFIVSSANACDRCIFQSKAAHYYEDTPTSYGGACGYENLALEMSRGYFAAAVPSLHRQGMGCGACYQVRCKNATLCNTIGTKVVLTDQNSDNRTDFVLSKKAFSTMALKGKGQELLKTGMVDIEYKRIPCEYNKNLLIQVVEWSHKPYYLAIKFLYQGGQTDITAVNIAAQDGSGEWQYMKRNYGAIWDTNKVPEGAIKLVVIVVSGYKNGRGIMMSYALPSDWKNGEIYDTGIQIKDIASEACNPWQCGDQPWK Homology
BLAST of CaUC02G029650 vs. NCBI nr
Match: XP_008447890.1 (PREDICTED: expansin-like A2 [Cucumis melo] >KAA0040375.1 expansin-like A2 [Cucumis melo var. makuwa] >QDL52557.1 expansin A2-like protein [Cucumis melo]) HSP 1 Score: 516.2 bits (1328), Expect = 1.7e-142 Identity = 236/263 (89.73%), Postives = 258/263 (98.10%), Query Frame = 0
BLAST of CaUC02G029650 vs. NCBI nr
Match: XP_038888822.1 (expansin-like A1 [Benincasa hispida]) HSP 1 Score: 515.8 bits (1327), Expect = 2.2e-142 Identity = 239/264 (90.53%), Postives = 254/264 (96.21%), Query Frame = 0
BLAST of CaUC02G029650 vs. NCBI nr
Match: XP_004153088.1 (expansin-like A1 [Cucumis sativus]) HSP 1 Score: 512.7 bits (1319), Expect = 1.9e-141 Identity = 235/263 (89.35%), Postives = 255/263 (96.96%), Query Frame = 0
BLAST of CaUC02G029650 vs. NCBI nr
Match: XP_022969217.1 (expansin-like A2 [Cucurbita maxima]) HSP 1 Score: 482.3 bits (1240), Expect = 2.8e-132 Identity = 226/264 (85.61%), Postives = 242/264 (91.67%), Query Frame = 0
BLAST of CaUC02G029650 vs. NCBI nr
Match: XP_022952635.1 (expansin-like A2 [Cucurbita moschata]) HSP 1 Score: 480.7 bits (1236), Expect = 8.0e-132 Identity = 225/264 (85.23%), Postives = 241/264 (91.29%), Query Frame = 0
BLAST of CaUC02G029650 vs. ExPASy Swiss-Prot
Match: Q9LZT4 (Expansin-like A1 OS=Arabidopsis thaliana OX=3702 GN=EXLA1 PE=2 SV=1) HSP 1 Score: 265.4 bits (677), Expect = 6.9e-70 Identity = 131/263 (49.81%), Postives = 177/263 (67.30%), Query Frame = 0
BLAST of CaUC02G029650 vs. ExPASy Swiss-Prot
Match: Q9SVE5 (Expansin-like A2 OS=Arabidopsis thaliana OX=3702 GN=EXLA2 PE=2 SV=1) HSP 1 Score: 260.8 bits (665), Expect = 1.7e-68 Identity = 132/265 (49.81%), Postives = 180/265 (67.92%), Query Frame = 0
BLAST of CaUC02G029650 vs. ExPASy Swiss-Prot
Match: Q9LZT5 (Expansin-like A3 OS=Arabidopsis thaliana OX=3702 GN=EXLA3 PE=2 SV=1) HSP 1 Score: 255.0 bits (650), Expect = 9.4e-67 Identity = 126/259 (48.65%), Postives = 173/259 (66.80%), Query Frame = 0
BLAST of CaUC02G029650 vs. ExPASy Swiss-Prot
Match: Q7XCL0 (Expansin-like A2 OS=Oryza sativa subsp. japonica OX=39947 GN=EXLA2 PE=2 SV=1) HSP 1 Score: 235.0 bits (598), Expect = 1.0e-60 Identity = 123/265 (46.42%), Postives = 163/265 (61.51%), Query Frame = 0
BLAST of CaUC02G029650 vs. ExPASy Swiss-Prot
Match: Q10S70 (Expansin-like A1 OS=Oryza sativa subsp. japonica OX=39947 GN=EXLA1 PE=2 SV=1) HSP 1 Score: 228.4 bits (581), Expect = 9.4e-59 Identity = 118/252 (46.83%), Postives = 159/252 (63.10%), Query Frame = 0
BLAST of CaUC02G029650 vs. ExPASy TrEMBL
Match: A0A1S3BJ37 (Expansin A2-like protein OS=Cucumis melo OX=3656 GN=LOC103490239 PE=2 SV=1) HSP 1 Score: 516.2 bits (1328), Expect = 8.3e-143 Identity = 236/263 (89.73%), Postives = 258/263 (98.10%), Query Frame = 0
BLAST of CaUC02G029650 vs. ExPASy TrEMBL
Match: A0A5A7TG29 (Expansin-like A2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold460G00860 PE=3 SV=1) HSP 1 Score: 516.2 bits (1328), Expect = 8.3e-143 Identity = 236/263 (89.73%), Postives = 258/263 (98.10%), Query Frame = 0
BLAST of CaUC02G029650 vs. ExPASy TrEMBL
Match: A0A6J1HVR1 (expansin-like A2 OS=Cucurbita maxima OX=3661 GN=LOC111468282 PE=3 SV=1) HSP 1 Score: 482.3 bits (1240), Expect = 1.3e-132 Identity = 226/264 (85.61%), Postives = 242/264 (91.67%), Query Frame = 0
BLAST of CaUC02G029650 vs. ExPASy TrEMBL
Match: A0A6J1GMB8 (expansin-like A2 OS=Cucurbita moschata OX=3662 GN=LOC111455267 PE=3 SV=1) HSP 1 Score: 480.7 bits (1236), Expect = 3.9e-132 Identity = 225/264 (85.23%), Postives = 241/264 (91.29%), Query Frame = 0
BLAST of CaUC02G029650 vs. ExPASy TrEMBL
Match: A0A6J1C3L3 (expansin-like A1 OS=Momordica charantia OX=3673 GN=LOC111007945 PE=3 SV=1) HSP 1 Score: 463.4 bits (1191), Expect = 6.4e-127 Identity = 217/264 (82.20%), Postives = 238/264 (90.15%), Query Frame = 0
BLAST of CaUC02G029650 vs. TAIR 10
Match: AT3G45970.1 (expansin-like A1 ) HSP 1 Score: 265.4 bits (677), Expect = 4.9e-71 Identity = 131/263 (49.81%), Postives = 177/263 (67.30%), Query Frame = 0
BLAST of CaUC02G029650 vs. TAIR 10
Match: AT4G38400.1 (expansin-like A2 ) HSP 1 Score: 260.8 bits (665), Expect = 1.2e-69 Identity = 132/265 (49.81%), Postives = 180/265 (67.92%), Query Frame = 0
BLAST of CaUC02G029650 vs. TAIR 10
Match: AT3G45960.2 (expansin-like A3 ) HSP 1 Score: 255.0 bits (650), Expect = 6.7e-68 Identity = 126/259 (48.65%), Postives = 173/259 (66.80%), Query Frame = 0
BLAST of CaUC02G029650 vs. TAIR 10
Match: AT3G45960.1 (expansin-like A3 ) HSP 1 Score: 224.6 bits (571), Expect = 9.6e-59 Identity = 109/215 (50.70%), Postives = 149/215 (69.30%), Query Frame = 0
BLAST of CaUC02G029650 vs. TAIR 10
Match: AT4G17030.1 (expansin-like B1 ) HSP 1 Score: 154.8 bits (390), Expect = 9.4e-38 Identity = 88/223 (39.46%), Postives = 119/223 (53.36%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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