CaUC02G027520 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC02G027520
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Beta-amylase
Location	Ciama_Chr02: 1842912 .. 1844813 (-)
RNA-Seq Expression	CaUC02G027520
Synteny	CaUC02G027520

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAGGTAAGATTTTTACTTTTTACTGTCCCTACATGGATCAAGAGAGGGATAGTGGCTGAAGGGAAGGTAGCCAAGCTTGAAAAAAGATTAAGTTTCTCTCTTAATTAATCACAATAGCTCTTAAACATGGTTTTTATGTAATAAAAGTGAAGTCAACTGGTTTAGACAAATAATCCAAGAGCTCCAAGATTCAAATCTTCAAATTACACATGTACTAAAAAAAAACTTAGAAAAAAGCTATTTTTTTACCTCAAGGGATTGGTGAACAATGGCGGTCAGCAATACACCATGCCCATGAGTTGAAGTGGGGCACTAATGATTTATAGTAAAAGCCTGTGGGATTGGACTTCGAGAAAATTCCATTCACACTTTTGAGGTTAAAAATGAAAAGGGATTTTGTTTGTTATTACATACCTGTTGAATAGACATCAAGAATCGAGCCAACGAAGCATGTCTGCCAAGTCATTCCTCTTTGAGATAGGGGTTAACCAGTTGTGGCTCTGAGTTAGCTGAACCATGCATCACATTTCCCCTCTTTAAAAGAAGCCTACACAGATTTTGACTGTTTGTAAATAATCTTGAAAACGAAACAATCATAATTTGTCAATATTTTGAATTCTTCCAAGCTGTCACCAAAAACCTGTCTGACTTGTGCAAGTCTCAGCGAGAGGACAACCAATAAAGCATCAAATTACACATCTTCTTCCTCATCTTTTACCAAACATGGACTTGGACATGAAGAAACTACAAGACATTTTCTTTCTTGAATTGGAGAAGAAGATGTATGGATTGTGTTTCACTAGCTCACTCGTTATCCTTACCTTTTTTATGTGTGAATTCATGTTCGCTCACTTCCTATCTGCTCTAATACTCATAAACAATTGAAGGAAATGGCTTCAGACACAATCATGGCAAGTGTTGTGTGCCAAGTGCATGGTGGAATAATAGAGGGAATAGCACCATGCAGAGGATATGTTCAAGGTGAAGTTAAATGTAAAGTGCAAGTAAAGAAGCCAAAACTCAACTGGTCTCTCCCATGTTGGTCTATAGCACCAAGGATCAATCTTCAGACTTCGGCATATGAGGTGACTACGATAGAACCAGAGGTAACTATGTTCAGGGATGTACATTTTTCTTCTATCAGATATCCTGAACTTGTGACATAGATGGTCTTTCAAAAGCTTGAAGACGCCATCAACCCTGATTCAATCTTTTACTTAATATGCAGACACATAGAGGATCAAAAAATGCCTTGTTCTTTTGGAAACCCTGTCTTCTTTCTCATCAACTCGATGCTTCATTTATATTTTTGAGTTTGGGACTCATTTAGTTAATTGATTTATGCACTTTTATCCACTTTGCAGTCTTCCATGAAACTTTTCTTTTATGAAGGTATCGAGCAACAGTCCTGACTACGATGAAAAGTTGATACAAAATTATGTGTCAGTTTATGTGACGTTCCCAATAAGTTACATACAGAATCTTGTATACTCATATTGATCAGAGAAACAAGTTCAGTTTATCATTCTTCTTATTTTCATAACACCAGTTGGGAGTTGTTACAACTGATAATGAACTGGAAGACAGAGATGGAATAAAGAAATAACTTGAAAAACTACAAGCAGCAGGCATAGATGGAGTAATGATTGATGTTTGGTGGGGGGGGGGGTGGTGTTGTAGAATCCAAAAGGCCAAATCAGTACGATTGGACTGCATATTGGAGCTTATTTAAGATAATTCAAGATATAATATCCTTCCACCAATGTGGAGGGAATGTGGAAGATTCTGTCAATATTCCACTTAGTTGTATTCTCAAAATTGGAGAATTAAATCCTGTATTTTTTACACAAACCAATCGGGGACTAGAACAAGGAGTACCTCACTCTTGGAGTCAATAA

mRNA sequence

ATGACAGGGATTTTGTTTGTTATTACATACCTGTTGAATAGACATCAAGAATCGAGCCAACGAAGCATGTCTGCCAAGTCATTCCTCTTTGAGATAGGGAAGGAAATGGCTTCAGACACAATCATGGCAAGTGTTGTGTGCCAAGTGCATGGTGGAATAATAGAGGGAATAGCACCATGCAGAGGATATGTTCAAGGTGAAGTTAAATGTAAAGTGCAAGTAAAGAAGCCAAAACTCAACTGGTCTCTCCCATGTTGGTCTATAGCACCAAGGATCAATCTTCAGACTTCGGCATATGAGGTGACTACGATAGAACCAGAGGTATCGAGCAACAGTCCTGACTACGATGAAAAGTTGATACAAAATTATGTGTCAGTTTATGTGACGTTCCCAATAAAATCCAAAAGGCCAAATCAGTACGATTGGACTGCATATTGGAGCTTATTTAAGATAATTCAAGATATAATATCCTTCCACCAATGTGGAGGGAATGTGGAAGATTCTGTCAATATTCCACTTAGTTGTATTCTCAAAATTGGAGAATTAAATCCTGTATTTTTTACACAAACCAATCGGGGACTAGAACAAGGAGTACCTCACTCTTGGAGTCAATAA

Coding sequence (CDS)

ATGACAGGGATTTTGTTTGTTATTACATACCTGTTGAATAGACATCAAGAATCGAGCCAACGAAGCATGTCTGCCAAGTCATTCCTCTTTGAGATAGGGAAGGAAATGGCTTCAGACACAATCATGGCAAGTGTTGTGTGCCAAGTGCATGGTGGAATAATAGAGGGAATAGCACCATGCAGAGGATATGTTCAAGGTGAAGTTAAATGTAAAGTGCAAGTAAAGAAGCCAAAACTCAACTGGTCTCTCCCATGTTGGTCTATAGCACCAAGGATCAATCTTCAGACTTCGGCATATGAGGTGACTACGATAGAACCAGAGGTATCGAGCAACAGTCCTGACTACGATGAAAAGTTGATACAAAATTATGTGTCAGTTTATGTGACGTTCCCAATAAAATCCAAAAGGCCAAATCAGTACGATTGGACTGCATATTGGAGCTTATTTAAGATAATTCAAGATATAATATCCTTCCACCAATGTGGAGGGAATGTGGAAGATTCTGTCAATATTCCACTTAGTTGTATTCTCAAAATTGGAGAATTAAATCCTGTATTTTTTACACAAACCAATCGGGGACTAGAACAAGGAGTACCTCACTCTTGGAGTCAATAA

Protein sequence

MTGILFVITYLLNRHQESSQRSMSAKSFLFEIGKEMASDTIMASVVCQVHGGIIEGIAPCRGYVQGEVKCKVQVKKPKLNWSLPCWSIAPRINLQTSAYEVTTIEPEVSSNSPDYDEKLIQNYVSVYVTFPIKSKRPNQYDWTAYWSLFKIIQDIISFHQCGGNVEDSVNIPLSCILKIGELNPVFFTQTNRGLEQGVPHSWSQ

Homology

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BLAST of CaUC02G027520 vs. NCBI nr
Match: XP_038887373.1 (beta-amylase isoform X1 [Benincasa hispida] >XP_038887374.1 beta-amylase isoform X1 [Benincasa hispida])

HSP 1 Score: 235.0 bits (598), Expect = 5.9e-58
Identity = 128/204 (62.75%), Postives = 138/204 (67.65%), Query Frame = 0


Query: 36  MASDTIMASVVCQVHGGIIEGIAPCRGYVQGEVKCKVQVKKPKLNWSLPCWSIAPRINLQ 95
           MASDTIMASVVCQVH G+IE  APCRGYVQGEVKCKVQVKK KLNWSLPCWSI PRIN++
Sbjct: 1   MASDTIMASVVCQVHSGLIERTAPCRGYVQGEVKCKVQVKKLKLNWSLPCWSITPRINIR 60

Query: 96  TSAYEVTTIEPEVSSNSPDYDEKLIQNYVSVYVTFP------------------------ 155
           T AYE+T IEPEVSS+SPDYD KLIQNYV VYV  P                        
Sbjct: 61  TPAYEMTMIEPEVSSSSPDYDVKLIQNYVPVYVMLPLEIVTTDNELEDRDGIKKQLEQLR 120

Query: 156 ---------------IKSKRPNQYDWTAYWSLFKIIQD-------IISFHQCGGNVEDSV 193
                          ++SK PNQYDWTAY SLFKIIQ+       I+SFHQCGGNV DSV
Sbjct: 121 AADVDGVMIDVWWGIVESKGPNQYDWTAYRSLFKIIQECGLKLQAIMSFHQCGGNVGDSV 180

[Close]

BLAST of CaUC02G027520 vs. NCBI nr
Match: XP_023531442.1 (beta-amylase-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 209.5 bits (532), Expect = 2.7e-50
Identity = 116/204 (56.86%), Postives = 128/204 (62.75%), Query Frame = 0


Query: 36  MASDTIMASVVCQVHGGIIEGIAPCRGYVQGEVKCKVQVKKPKLNWSLPCWSIAPRINLQ 95
           MAS+TIM SVVCQ+H GIIE I PC GYVQG  KCKVQ KK +LNWSLPCWS A RIN +
Sbjct: 1   MASETIMTSVVCQMHSGIIERIVPCSGYVQGRYKCKVQGKKLELNWSLPCWSTASRINHR 60

Query: 96  TSAYEVTTIEPEVSSNSPDYDEKLIQNYVSVYVTFP------------------------ 155
            SA+E TTIEPE S +SPDYDE+LIQNYV VYV  P                        
Sbjct: 61  ISAFEATTIEPEASRSSPDYDERLIQNYVPVYVMLPLGVITTDNELEDRDGITKQLKQLR 120

Query: 156 ---------------IKSKRPNQYDWTAYWSLFKII-------QDIISFHQCGGNVEDSV 193
                          ++SK PNQYDWTAY SLFKII       Q I+SFHQCGGNV DSV
Sbjct: 121 EAGVDGVMIDVWWGIVESKGPNQYDWTAYRSLFKIIQGCGLKLQTIMSFHQCGGNVGDSV 180

[Close]

BLAST of CaUC02G027520 vs. NCBI nr
Match: XP_023531443.1 (beta-amylase-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 209.5 bits (532), Expect = 2.7e-50
Identity = 116/204 (56.86%), Postives = 128/204 (62.75%), Query Frame = 0


Query: 36  MASDTIMASVVCQVHGGIIEGIAPCRGYVQGEVKCKVQVKKPKLNWSLPCWSIAPRINLQ 95
           MAS+TIM SVVCQ+H GIIE I PC GYVQG  KCKVQ KK +LNWSLPCWS A RIN +
Sbjct: 1   MASETIMTSVVCQMHSGIIERIVPCSGYVQGRYKCKVQGKKLELNWSLPCWSTASRINHR 60

Query: 96  TSAYEVTTIEPEVSSNSPDYDEKLIQNYVSVYVTFP------------------------ 155
            SA+E TTIEPE S +SPDYDE+LIQNYV VYV  P                        
Sbjct: 61  ISAFEATTIEPEASRSSPDYDERLIQNYVPVYVMLPLGVITTDNELEDRDGITKQLKQLR 120

Query: 156 ---------------IKSKRPNQYDWTAYWSLFKII-------QDIISFHQCGGNVEDSV 193
                          ++SK PNQYDWTAY SLFKII       Q I+SFHQCGGNV DSV
Sbjct: 121 EAGVDGVMIDVWWGIVESKGPNQYDWTAYRSLFKIIQGCGLKLQTIMSFHQCGGNVGDSV 180

[Close]

BLAST of CaUC02G027520 vs. NCBI nr
Match: XP_011658712.1 (beta-amylase isoform X1 [Cucumis sativus] >KAE8645749.1 hypothetical protein Csa_020589 [Cucumis sativus])

HSP 1 Score: 208.0 bits (528), Expect = 7.7e-50
Identity = 123/205 (60.00%), Postives = 133/205 (64.88%), Query Frame = 0


Query: 36  MASDTIMASVVCQVHGGIIEGIAPCRGYVQGEVKCKVQVKKPKLNWSLPCWSIAPRINLQ 95
           MASDTIMAS VCQVH GII+ IA    +VQGEVKCK+QVK  K NWSLPCWSIAPRINL+
Sbjct: 1   MASDTIMASFVCQVHSGIIKRIA----HVQGEVKCKLQVKNLKPNWSLPCWSIAPRINLR 60

Query: 96  TSAYEVTTIEPEVS-SNSPDYDEKLIQNYVSVYVTFP----------------------- 155
           T AYE TTIE EVS S+SPDYD+KLIQNYV VYV  P                       
Sbjct: 61  TPAYETTTIEQEVSTSSSPDYDKKLIQNYVPVYVMLPLGVVTTDNELEDRDGIKKQLKQL 120

Query: 156 ----------------IKSKRPNQYDWTAYWSLFKIIQD-------IISFHQCGGNVEDS 193
                           ++SK PNQYDWTAY SLFKIIQ+       I+SFHQCGGNV DS
Sbjct: 121 QAADVDGVMIDVWWGIVESKGPNQYDWTAYRSLFKIIQECGLKLQAIMSFHQCGGNVGDS 180

[Close]

BLAST of CaUC02G027520 vs. NCBI nr
Match: KAG7022884.1 (Beta-amylase [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 205.3 bits (521), Expect = 5.0e-49
Identity = 114/204 (55.88%), Postives = 126/204 (61.76%), Query Frame = 0


Query: 36  MASDTIMASVVCQVHGGIIEGIAPCRGYVQGEVKCKVQVKKPKLNWSLPCWSIAPRINLQ 95
           M S+TIM SVVCQ+H GIIE I PC GYVQG  KCK Q KK +LNWSLPCWSIA RIN +
Sbjct: 1   MTSETIMTSVVCQMHSGIIETIVPCSGYVQGRYKCKAQGKKLELNWSLPCWSIASRINHR 60

Query: 96  TSAYEVTTIEPEVSSNSPDYDEKLIQNYVSVYVTFP------------------------ 155
            SAYE TTIEPE S +SPDYDE+LI+NYV VYV  P                        
Sbjct: 61  ISAYEATTIEPEASRSSPDYDERLIKNYVPVYVMLPLGVITTDNELEDRDEITKQLEQLR 120

Query: 156 ---------------IKSKRPNQYDWTAYWSLFKII-------QDIISFHQCGGNVEDSV 193
                          ++SK  NQYDWTAY SLFKII       Q I+SFHQCGGNV DSV
Sbjct: 121 EAGVDGVMIDVWWGIVESKGANQYDWTAYRSLFKIIQGCGLKLQTIMSFHQCGGNVGDSV 180

[Close]

BLAST of CaUC02G027520 vs. ExPASy Swiss-Prot
Match: Q8L762 (Beta-amylase 6 OS=Arabidopsis thaliana OX=3702 GN=BAM6 PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.1e-11
Identity = 54/196 (27.55%), Postives = 90/196 (45.92%), Query Frame = 0


Query: 42  MASVVCQVHGGIIEGIAPCRGYVQGEVKCKVQVKKPKLNWSLPCWSIAPRINLQTSAYEV 101
           M SV+  ++  +I G    +G     +  + +  K ++ W L     + R +  T++   
Sbjct: 1   MTSVLGMMNPNLINGRNLHKG---SSIFVQDKETKKRVQWRLSIKEGSLRTHQATAS--- 60

Query: 102 TTIEPEVSS-NSPDYDEKLIQNYVSVYVTFP----------------------------- 161
           +  EP+ +  N+  Y++K++ NYV VYV                                
Sbjct: 61  SATEPKATEFNTTTYEDKMLTNYVPVYVMLQLGVITNDNVLENEESLKKQLKKLKQSQVD 120

Query: 162 ----------IKSKRPNQYDWTAYWSLFKIIQD-------IISFHQCGGNVEDSVNIPL- 189
                     ++SK P QY W+AY +LF I+Q        I+SFH+CGGN+ D VNIP+ 
Sbjct: 121 GVMVDVWWGIVESKGPKQYQWSAYRNLFAIVQSFGLKLQAIMSFHRCGGNIGDDVNIPIP 180

[Close]

BLAST of CaUC02G027520 vs. ExPASy Swiss-Prot
Match: O64407 (Beta-amylase OS=Vigna unguiculata OX=3917 GN=BMY1 PE=2 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.5e-11
Identity = 37/69 (53.62%), Postives = 47/69 (68.12%), Query Frame = 0


Query: 132 IKSKRPNQYDWTAYWSLFKIIQD-------IISFHQCGGNVEDSVNIPL-SCILKIGELN 191
           I+ K P QYDW+AY SLF+++Q+       I+SFHQCGGNV D VNIP+   +L IGE +
Sbjct: 60  IEQKGPKQYDWSAYKSLFQLVQECGLKLQAIMSFHQCGGNVGDVVNIPIPQWVLDIGESD 119

Query: 192 PVFFTQTNR 193
           P  F  TNR
Sbjct: 120 PDIF-YTNR 127

[Close]

BLAST of CaUC02G027520 vs. ExPASy Swiss-Prot
Match: O22585 (Beta-amylase OS=Medicago sativa OX=3879 GN=BMY1 PE=2 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 2.5e-11
Identity = 35/71 (49.30%), Postives = 45/71 (63.38%), Query Frame = 0


Query: 132 IKSKRPNQYDWTAYWSLFKIIQD-------IISFHQCGGNVEDSVNIPL-SCILKIGELN 191
           I+ K P +YDW+AY SLF+++Q        I+SFHQCGGNV D VNIPL   +L IGE +
Sbjct: 60  IEQKGPKEYDWSAYKSLFQLVQKCGLKLQAIMSFHQCGGNVGDVVNIPLPKWVLDIGESD 119

Query: 192 PVFFTQTNRGL 195
           P  F     G+
Sbjct: 120 PDIFYTNRSGI 130

[Close]

BLAST of CaUC02G027520 vs. ExPASy Swiss-Prot
Match: P10537 (Beta-amylase OS=Ipomoea batatas OX=4120 GN=BMY1 PE=1 SV=4)

HSP 1 Score: 68.6 bits (166), Expect = 9.6e-11
Identity = 37/69 (53.62%), Postives = 47/69 (68.12%), Query Frame = 0


Query: 132 IKSKRPNQYDWTAYWSLFKI-------IQDIISFHQCGGNVEDSVNIPL-SCILKIGELN 191
           I++K P QYDW+AY  LF++       IQ I+SFHQCGGNV D+V IP+   IL+IG+ N
Sbjct: 61  IEAKGPKQYDWSAYRELFQLVKKCGLKIQAIMSFHQCGGNVGDAVFIPIPQWILQIGDKN 120

Query: 192 PVFFTQTNR 193
           P  F  TNR
Sbjct: 121 PDIF-YTNR 128

[Close]

BLAST of CaUC02G027520 vs. ExPASy Swiss-Prot
Match: P25853 (Beta-amylase 5 OS=Arabidopsis thaliana OX=3702 GN=BAM5 PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 9.6e-11
Identity = 43/128 (33.59%), Postives = 58/128 (45.31%), Query Frame = 0


Query: 114 DYDEKLIQNYVSVYVTFP----------------------------------------IK 173
           +Y+EKL+ NYV VYV  P                                        I+
Sbjct: 4   NYNEKLLLNYVPVYVMLPLGVVNVENVFADPETLETQLKRLKEEAGVDGVMVDVWWGIIE 63

Query: 174 SKRPNQYDWTAYWSLFKI-------IQDIISFHQCGGNVEDSVNIPL-SCILKIGELNPV 194
           SK P QYDWTAY +LF++       IQ I+SFHQCGGNV D V IP+   +  +G+ +P 
Sbjct: 64  SKGPKQYDWTAYKTLFQLIARLGLKIQAIMSFHQCGGNVGDIVTIPIPQWVRDVGDNDPD 123

[Close]

BLAST of CaUC02G027520 vs. ExPASy TrEMBL
Match: A0A6J1ESN0 (Beta-amylase OS=Cucurbita moschata OX=3662 GN=LOC111437211 PE=3 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 3.2e-49
Identity = 114/204 (55.88%), Postives = 126/204 (61.76%), Query Frame = 0


Query: 36  MASDTIMASVVCQVHGGIIEGIAPCRGYVQGEVKCKVQVKKPKLNWSLPCWSIAPRINLQ 95
           M S+TIM SVVCQ+H GIIE I PC GYVQG  KCKVQ KK +LNWSLPCWSIA RIN +
Sbjct: 1   MTSETIMTSVVCQMHSGIIETIVPCSGYVQGRYKCKVQGKKLELNWSLPCWSIASRINHR 60

Query: 96  TSAYEVTTIEPEVSSNSPDYDEKLIQNYVSVYVTFP------------------------ 155
            SAYE TT EPE S +SPDYDE+LI+NYV VYV  P                        
Sbjct: 61  ISAYEATTTEPEASRSSPDYDERLIKNYVPVYVMLPLGVITTDNELEDRDEITKQLEQLR 120

Query: 156 ---------------IKSKRPNQYDWTAYWSLFKII-------QDIISFHQCGGNVEDSV 193
                          ++SK  NQYDWTAY SLFKII       Q I+SFHQCGGNV DSV
Sbjct: 121 EAGVDGVMIDVWWGIVESKGANQYDWTAYRSLFKIIQGCGLKLQTIMSFHQCGGNVGDSV 180

[Close]

BLAST of CaUC02G027520 vs. ExPASy TrEMBL
Match: A0A1S3C222 (Beta-amylase OS=Cucumis melo OX=3656 GN=LOC103495571 PE=3 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 9.2e-49
Identity = 121/205 (59.02%), Postives = 132/205 (64.39%), Query Frame = 0


Query: 36  MASDTIMASVVCQVHGGIIEGIAPCRGYVQGEVKCKVQVKKPKLNWSLPCWSIAPRINLQ 95
           MASDTIMAS VCQVH GII+ IA    + QG+VKCKVQVK  KLNWSLPCWS APRINL+
Sbjct: 1   MASDTIMASFVCQVHSGIIKRIA----HGQGDVKCKVQVKNLKLNWSLPCWSRAPRINLR 60

Query: 96  TSAYEVTTIEPEVS-SNSPDYDEKLIQNYVSVYVTFP----------------------- 155
           T AYE+TTIEPEVS S+SPDY +KLIQNYV VYV  P                       
Sbjct: 61  TPAYEMTTIEPEVSTSSSPDYAKKLIQNYVPVYVMLPLGVVTTDNELEDRDGIKKQLKQL 120

Query: 156 ----------------IKSKRPNQYDWTAYWSLFKIIQD-------IISFHQCGGNVEDS 193
                           ++SK PNQYDWTAY SLFKIIQ+       I+SFHQCGGNV DS
Sbjct: 121 QAADVDGVMIDVWWGIVESKGPNQYDWTAYRSLFKIIQECGLKLQAIMSFHQCGGNVGDS 180

[Close]

BLAST of CaUC02G027520 vs. ExPASy TrEMBL
Match: A0A5A7TFD9 (Beta-amylase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003990 PE=3 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 1.2e-48
Identity = 121/205 (59.02%), Postives = 132/205 (64.39%), Query Frame = 0


Query: 36  MASDTIMASVVCQVHGGIIEGIAPCRGYVQGEVKCKVQVKKPKLNWSLPCWSIAPRINLQ 95
           MASDTIMAS VCQVH GII+ IA    + QG+VKCKVQVK  KLNWSLPCWS APRINL+
Sbjct: 1   MASDTIMASFVCQVHSGIIKRIA----HGQGDVKCKVQVKNLKLNWSLPCWSRAPRINLR 60

Query: 96  TSAYEVTTIEPEVS-SNSPDYDEKLIQNYVSVYVTFP----------------------- 155
           T AYE+TTIEPEVS S+SPDY +KLIQNYV VYV  P                       
Sbjct: 61  TLAYEMTTIEPEVSTSSSPDYAKKLIQNYVPVYVMLPLGVVTTDNELEDRDGIKKQLKQL 120

Query: 156 ----------------IKSKRPNQYDWTAYWSLFKIIQD-------IISFHQCGGNVEDS 193
                           ++SK PNQYDWTAY SLFKIIQ+       I+SFHQCGGNV DS
Sbjct: 121 QAADVDGVMIDVWWGIVESKGPNQYDWTAYRSLFKIIQECGLKLQAIMSFHQCGGNVGDS 180

[Close]

BLAST of CaUC02G027520 vs. ExPASy TrEMBL
Match: A0A6J1JI22 (Beta-amylase OS=Cucurbita maxima OX=3661 GN=LOC111485976 PE=3 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 1.2e-48
Identity = 113/204 (55.39%), Postives = 127/204 (62.25%), Query Frame = 0


Query: 36  MASDTIMASVVCQVHGGIIEGIAPCRGYVQGEVKCKVQVKKPKLNWSLPCWSIAPRINLQ 95
           MAS+TIM SVVCQ+H GIIE I PC GYVQG  KCK Q KK +LNWSLPCWSIA RIN +
Sbjct: 1   MASETIMISVVCQMHSGIIERIVPCSGYVQGRYKCKAQGKKLELNWSLPCWSIASRINHR 60

Query: 96  TSAYEVTTIEPEVSSNSPDYDEKLIQNYVSVYVTFP------------------------ 155
            SA++ TTIEPE S +SPD DE+LI+NYV VYV  P                        
Sbjct: 61  ISAFKATTIEPEASRSSPDNDERLIKNYVPVYVMLPLGVITTDNELEDRDGITKQLEQLQ 120

Query: 156 ---------------IKSKRPNQYDWTAYWSLFKII-------QDIISFHQCGGNVEDSV 193
                          ++SK PNQYDWTAY SLFKII       Q I+SFHQCGGNV DSV
Sbjct: 121 EAGVDGVMIDVWWGIVESKGPNQYDWTAYRSLFKIIQGCGLKLQTIMSFHQCGGNVGDSV 180

[Close]

BLAST of CaUC02G027520 vs. ExPASy TrEMBL
Match: A0A6J1C678 (Beta-amylase OS=Momordica charantia OX=3673 GN=LOC111007758 PE=3 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 1.2e-43
Identity = 109/204 (53.43%), Postives = 126/204 (61.76%), Query Frame = 0


Query: 42  MASVVCQVHGGIIEGIAPCRGYVQGEVKCKVQVKKPKLNWSLPCWSIAPRINLQTSAYEV 101
           M SVVCQ+H GIIE IAPC  YVQG+VK KVQ+KK +LNWSLPC S+A R NL+T+AYE 
Sbjct: 1   MTSVVCQMHSGIIERIAPCSRYVQGKVKSKVQIKK-QLNWSLPCCSVASRSNLRTTAYEA 60

Query: 102 TTIEPE------VSSNSPDYDEKLIQNYVSVYVTFP------------------------ 161
           T+IEPE      VSS+ PDYD+K+++NYV VYV  P                        
Sbjct: 61  TSIEPEGTTLRDVSSSHPDYDKKILENYVPVYVMLPLGVVTTDNALEDRDGIKKQLGQLR 120

Query: 162 ---------------IKSKRPNQYDWTAYWSLFKIIQD-------IISFHQCGGNVEDSV 193
                          ++SK P QYDWTAY SLFKIIQ+       I+SFHQCGGNV DSV
Sbjct: 121 AVGVDGVMVDVWWGIVESKGPKQYDWTAYKSLFKIIQEFGLKLQAIMSFHQCGGNVGDSV 180

[Close]

BLAST of CaUC02G027520 vs. TAIR 10
Match: AT2G32290.1 (beta-amylase 6 )

HSP 1 Score: 71.6 bits (174), Expect = 8.1e-13
Identity = 54/196 (27.55%), Postives = 90/196 (45.92%), Query Frame = 0


Query: 42  MASVVCQVHGGIIEGIAPCRGYVQGEVKCKVQVKKPKLNWSLPCWSIAPRINLQTSAYEV 101
           M SV+  ++  +I G    +G     +  + +  K ++ W L     + R +  T++   
Sbjct: 1   MTSVLGMMNPNLINGRNLHKG---SSIFVQDKETKKRVQWRLSIKEGSLRTHQATAS--- 60

Query: 102 TTIEPEVSS-NSPDYDEKLIQNYVSVYVTFP----------------------------- 161
           +  EP+ +  N+  Y++K++ NYV VYV                                
Sbjct: 61  SATEPKATEFNTTTYEDKMLTNYVPVYVMLQLGVITNDNVLENEESLKKQLKKLKQSQVD 120

Query: 162 ----------IKSKRPNQYDWTAYWSLFKIIQD-------IISFHQCGGNVEDSVNIPL- 189
                     ++SK P QY W+AY +LF I+Q        I+SFH+CGGN+ D VNIP+ 
Sbjct: 121 GVMVDVWWGIVESKGPKQYQWSAYRNLFAIVQSFGLKLQAIMSFHRCGGNIGDDVNIPIP 180

[Close]

BLAST of CaUC02G027520 vs. TAIR 10
Match: AT4G15210.1 (beta-amylase 5 )

HSP 1 Score: 68.6 bits (166), Expect = 6.8e-12
Identity = 43/128 (33.59%), Postives = 58/128 (45.31%), Query Frame = 0


Query: 114 DYDEKLIQNYVSVYVTFP----------------------------------------IK 173
           +Y+EKL+ NYV VYV  P                                        I+
Sbjct: 4   NYNEKLLLNYVPVYVMLPLGVVNVENVFADPETLETQLKRLKEEAGVDGVMVDVWWGIIE 63

Query: 174 SKRPNQYDWTAYWSLFKI-------IQDIISFHQCGGNVEDSVNIPL-SCILKIGELNPV 194
           SK P QYDWTAY +LF++       IQ I+SFHQCGGNV D V IP+   +  +G+ +P 
Sbjct: 64  SKGPKQYDWTAYKTLFQLIARLGLKIQAIMSFHQCGGNVGDIVTIPIPQWVRDVGDNDPD 123

[Close]

BLAST of CaUC02G027520 vs. TAIR 10
Match: AT4G15210.2 (beta-amylase 5 )

HSP 1 Score: 68.6 bits (166), Expect = 6.8e-12
Identity = 43/128 (33.59%), Postives = 58/128 (45.31%), Query Frame = 0


Query: 114 DYDEKLIQNYVSVYVTFP----------------------------------------IK 173
           +Y+EKL+ NYV VYV  P                                        I+
Sbjct: 4   NYNEKLLLNYVPVYVMLPLGVVNVENVFADPETLETQLKRLKEEAGVDGVMVDVWWGIIE 63

Query: 174 SKRPNQYDWTAYWSLFKI-------IQDIISFHQCGGNVEDSVNIPL-SCILKIGELNPV 194
           SK P QYDWTAY +LF++       IQ I+SFHQCGGNV D V IP+   +  +G+ +P 
Sbjct: 64  SKGPKQYDWTAYKTLFQLIARLGLKIQAIMSFHQCGGNVGDIVTIPIPQWVRDVGDNDPD 123

[Close]

BLAST of CaUC02G027520 vs. TAIR 10
Match: AT2G45880.1 (beta-amylase 7 )

HSP 1 Score: 58.2 bits (139), Expect = 9.2e-09
Identity = 27/66 (40.91%), Postives = 42/66 (63.64%), Query Frame = 0


Query: 132 IKSKRPNQYDWTAYWSLFKIIQD-------IISFHQCGGNVEDSVNIPL-SCILKIGELN 189
           ++   P +Y+WT Y  LF++++D       ++SFH+CGGNV D V IPL   + +IG  N
Sbjct: 295 VEGHSPQEYNWTGYRQLFQMVRDLNLKIQVLMSFHECGGNVGDDVCIPLPHWVAEIGRTN 354

[Close]

BLAST of CaUC02G027520 vs. TAIR 10
Match: AT4G00490.1 (beta-amylase 2 )

HSP 1 Score: 54.7 bits (130), Expect = 1.0e-07
Identity = 25/68 (36.76%), Postives = 44/68 (64.71%), Query Frame = 0


Query: 132 IKSKRPNQYDWTAYWSLFKIIQD-------IISFHQCGGNVEDSVNIPL-SCILKIGELN 191
           ++S  P  Y+W+ Y  LF++I++       ++SFH+CGGNV D V+I +   + +IG+ N
Sbjct: 142 VESHTPQVYNWSGYKKLFQMIRELGLKIQVVMSFHECGGNVGDDVHIQIPEWVREIGQSN 201

The following BLAST results are available for this feature:

BLAST of CaUC02G027520 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038887373.1	5.9e-58	62.75	beta-amylase isoform X1 [Benincasa hispida] >XP_038887374.1 beta-amylase isoform...	[more]
XP_023531442.1	2.7e-50	56.86	beta-amylase-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_023531443.1	2.7e-50	56.86	beta-amylase-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_011658712.1	7.7e-50	60.00	beta-amylase isoform X1 [Cucumis sativus] >KAE8645749.1 hypothetical protein Csa...	[more]
KAG7022884.1	5.0e-49	55.88	Beta-amylase [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of CaUC02G027520 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L762	1.1e-11	27.55	Beta-amylase 6 OS=Arabidopsis thaliana OX=3702 GN=BAM6 PE=2 SV=1	[more]
O64407	1.5e-11	53.62	Beta-amylase OS=Vigna unguiculata OX=3917 GN=BMY1 PE=2 SV=1	[more]
O22585	2.5e-11	49.30	Beta-amylase OS=Medicago sativa OX=3879 GN=BMY1 PE=2 SV=1	[more]
P10537	9.6e-11	53.62	Beta-amylase OS=Ipomoea batatas OX=4120 GN=BMY1 PE=1 SV=4	[more]
P25853	9.6e-11	33.59	Beta-amylase 5 OS=Arabidopsis thaliana OX=3702 GN=BAM5 PE=2 SV=1	[more]

BLAST of CaUC02G027520 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ESN0	3.2e-49	55.88	Beta-amylase OS=Cucurbita moschata OX=3662 GN=LOC111437211 PE=3 SV=1	[more]
A0A1S3C222	9.2e-49	59.02	Beta-amylase OS=Cucumis melo OX=3656 GN=LOC103495571 PE=3 SV=1	[more]
A0A5A7TFD9	1.2e-48	59.02	Beta-amylase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003990 P...	[more]
A0A6J1JI22	1.2e-48	55.39	Beta-amylase OS=Cucurbita maxima OX=3661 GN=LOC111485976 PE=3 SV=1	[more]
A0A6J1C678	1.2e-43	53.43	Beta-amylase OS=Momordica charantia OX=3673 GN=LOC111007758 PE=3 SV=1	[more]

BLAST of CaUC02G027520 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G32290.1	8.1e-13	27.55	beta-amylase 6	[more]
AT4G15210.1	6.8e-12	33.59	beta-amylase 5	[more]
AT4G15210.2	6.8e-12	33.59	beta-amylase 5	[more]
AT2G45880.1	9.2e-09	40.91	beta-amylase 7	[more]
AT4G00490.1	1.0e-07	36.76	beta-amylase 2	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001554	Glycoside hydrolase, family 14	PFAM	PF01373	Glyco_hydro_14	coord: 133..175 e-value: 5.6E-7 score: 28.8
IPR001554	Glycoside hydrolase, family 14	PANTHER	PTHR31352	FAMILY NOT NAMED	coord: 129..194
None	No IPR available	GENE3D	3.20.20.80	Glycosidases	coord: 118..203 e-value: 6.6E-12 score: 46.6
None	No IPR available	PANTHER	PTHR31352:SF42	BETA-AMYLASE	coord: 129..194
IPR017853	Glycoside hydrolase superfamily	SUPERFAMILY	51445	(Trans)glycosidases	coord: 122..173

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC02G027520.1	CaUC02G027520.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000272	polysaccharide catabolic process
molecular_function	GO:0016161	beta-amylase activity