CaUC02G027230 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC02G027230
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Equilibrative nucleoside transporter 2-like
Location	Ciama_Chr02: 1634709 .. 1634960 (-)
RNA-Seq Expression	CaUC02G027230
Synteny	CaUC02G027230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTGCAGAAACTGGTGAGCAACAATGTACTAACTACAATTCCAATTCCTCCATGAAAACTTTCTCTATTTACCCTAATTGTACTTCTACCAAGTTTTCTTCTTCTTCTTCCTCAAAACACCCCACCAAATTTCCCCATAATGGCTCCATCTCCGGCGCCAAACACGGCGGTGATAGGGACAAGTTCAAAAAGGCCGAAGAGTCTCTTCGAACCGTCATGTATTTGAGCTGTTGGGGTCCTAATTCATGA

mRNA sequence

ATGGGTGCAGAAACTGGTGAGCAACAATGTACTAACTACAATTCCAATTCCTCCATGAAAACTTTCTCTATTTACCCTAATTGTACTTCTACCAAGTTTTCTTCTTCTTCTTCCTCAAAACACCCCACCAAATTTCCCCATAATGGCTCCATCTCCGGCGCCAAACACGGCGGTGATAGGGACAAGTTCAAAAAGGCCGAAGAGTCTCTTCGAACCGTCATGTATTTGAGCTGTTGGGGTCCTAATTCATGA

Coding sequence (CDS)

ATGGGTGCAGAAACTGGTGAGCAACAATGTACTAACTACAATTCCAATTCCTCCATGAAAACTTTCTCTATTTACCCTAATTGTACTTCTACCAAGTTTTCTTCTTCTTCTTCCTCAAAACACCCCACCAAATTTCCCCATAATGGCTCCATCTCCGGCGCCAAACACGGCGGTGATAGGGACAAGTTCAAAAAGGCCGAAGAGTCTCTTCGAACCGTCATGTATTTGAGCTGTTGGGGTCCTAATTCATGA

Protein sequence

MGAETGEQQCTNYNSNSSMKTFSIYPNCTSTKFSSSSSSKHPTKFPHNGSISGAKHGGDRDKFKKAEESLRTVMYLSCWGPNS

Homology

[Close]

BLAST of CaUC02G027230 vs. NCBI nr
Match: KGN43575.1 (hypothetical protein Csa_020190 [Cucumis sativus])

HSP 1 Score: 104.8 bits (260), Expect = 3.8e-19
Identity = 61/81 (75.31%), Postives = 68/81 (83.95%), Query Frame = 0


Query: 6  GEQQ--CTNYNSNSSMKT-FSIYPNCTSTKFSSSSSSKHPTKFPHNGSISGAKHGGDRDK 65
          GEQQ   TN+NSNSS+KT FSIYPN TS+K SSSSSSK+PTKF HNGS+S     G++DK
Sbjct: 3  GEQQQYTTNFNSNSSIKTNFSIYPNHTSSK-SSSSSSKYPTKFSHNGSVS----QGEKDK 62

Query: 66 FKKAEESLRTVMYLSCWGPNS 84
           KKAEESLRTVMYLSCWGPNS
Sbjct: 63 IKKAEESLRTVMYLSCWGPNS 78

[Close]

BLAST of CaUC02G027230 vs. NCBI nr
Match: KAG6572336.1 (hypothetical protein SDJN03_29064, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 87.4 bits (215), Expect = 6.2e-14
Identity = 51/89 (57.30%), Postives = 61/89 (68.54%), Query Frame = 0


Query: 1  MGAETGEQQCTNYNSNSSMKTFSIYPNCTSTKFSSSSSSKHPTKFPH------NGSISGA 60
          M AETGE++ TNY+S+ S          +S KFSSS+SSK    F        +GS SGA
Sbjct: 2  MAAETGEKRYTNYSSDHS--------TSSSAKFSSSASSKQAITFSRDGSGSGSGSGSGA 61

Query: 61 KHGGDRDKFKKAEESLRTVMYLSCWGPNS 84
          KHGG+RD+ +KAEESLRTVMYLSCWGPNS
Sbjct: 62 KHGGERDRLRKAEESLRTVMYLSCWGPNS 82

[Close]

BLAST of CaUC02G027230 vs. NCBI nr
Match: VVA23499.1 (PREDICTED: wound-responsive family [Prunus dulcis])

HSP 1 Score: 57.8 bits (138), Expect = 5.3e-05
Identity = 32/58 (55.17%), Postives = 38/58 (65.52%), Query Frame = 0


Query: 26  PNCTSTKFSSSSSSKHPTKFPHNGSI-SGAKHGGDRDKFKKAEESLRTVMYLSCWGPN 83
           P C  +  SSSSSS     +  + S+ SGA    + DK K+AEESLRTVMYLSCWGPN
Sbjct: 105 PKCGGSSSSSSSSSSSKQAWRFSSSVDSGAFKAANSDKVKQAEESLRTVMYLSCWGPN 162

[Close]

BLAST of CaUC02G027230 vs. NCBI nr
Match: VVA23500.1 (PREDICTED: wound-responsive family [Prunus dulcis])

HSP 1 Score: 57.8 bits (138), Expect = 5.3e-05
Identity = 32/58 (55.17%), Postives = 38/58 (65.52%), Query Frame = 0


Query: 26 PNCTSTKFSSSSSSKHPTKFPHNGSI-SGAKHGGDRDKFKKAEESLRTVMYLSCWGPN 83
          P C  +  SSSSSS     +  + S+ SGA    + DK K+AEESLRTVMYLSCWGPN
Sbjct: 26 PKCGGSSSSSSSSSSSKQAWRFSSSVDSGAFKAANSDKVKQAEESLRTVMYLSCWGPN 83

[Close]

BLAST of CaUC02G027230 vs. NCBI nr
Match: CAB4306323.1 (unnamed protein product [Prunus armeniaca])

HSP 1 Score: 57.8 bits (138), Expect = 5.3e-05
Identity = 32/58 (55.17%), Postives = 38/58 (65.52%), Query Frame = 0


Query: 26 PNCTSTKFSSSSSSKHPTKFPHNGSI-SGAKHGGDRDKFKKAEESLRTVMYLSCWGPN 83
          P C  +  SSSSSS     +  + S+ SGA    + DK K+AEESLRTVMYLSCWGPN
Sbjct: 26 PKCGGSSSSSSSSSSSKQAWRFSSSVDSGAFKAANSDKVKQAEESLRTVMYLSCWGPN 83

[Close]

BLAST of CaUC02G027230 vs. ExPASy TrEMBL
Match: A0A0A0K1Q2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G046140 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.8e-19
Identity = 61/81 (75.31%), Postives = 68/81 (83.95%), Query Frame = 0


Query: 6  GEQQ--CTNYNSNSSMKT-FSIYPNCTSTKFSSSSSSKHPTKFPHNGSISGAKHGGDRDK 65
          GEQQ   TN+NSNSS+KT FSIYPN TS+K SSSSSSK+PTKF HNGS+S     G++DK
Sbjct: 3  GEQQQYTTNFNSNSSIKTNFSIYPNHTSSK-SSSSSSKYPTKFSHNGSVS----QGEKDK 62

Query: 66 FKKAEESLRTVMYLSCWGPNS 84
           KKAEESLRTVMYLSCWGPNS
Sbjct: 63 IKKAEESLRTVMYLSCWGPNS 78

[Close]

BLAST of CaUC02G027230 vs. ExPASy TrEMBL
Match: A0A5E4F7V9 (PREDICTED: wound-responsive family OS=Prunus dulcis OX=3755 GN=ALMOND_2B003799 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 2.5e-05
Identity = 32/58 (55.17%), Postives = 38/58 (65.52%), Query Frame = 0


Query: 26 PNCTSTKFSSSSSSKHPTKFPHNGSI-SGAKHGGDRDKFKKAEESLRTVMYLSCWGPN 83
          P C  +  SSSSSS     +  + S+ SGA    + DK K+AEESLRTVMYLSCWGPN
Sbjct: 26 PKCGGSSSSSSSSSSSKQAWRFSSSVDSGAFKAANSDKVKQAEESLRTVMYLSCWGPN 83

[Close]

BLAST of CaUC02G027230 vs. ExPASy TrEMBL
Match: A0A5E4F8Y8 (PREDICTED: wound-responsive family OS=Prunus dulcis OX=3755 GN=ALMOND_2B003799 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 2.5e-05
Identity = 32/58 (55.17%), Postives = 38/58 (65.52%), Query Frame = 0


Query: 26  PNCTSTKFSSSSSSKHPTKFPHNGSI-SGAKHGGDRDKFKKAEESLRTVMYLSCWGPN 83
           P C  +  SSSSSS     +  + S+ SGA    + DK K+AEESLRTVMYLSCWGPN
Sbjct: 105 PKCGGSSSSSSSSSSSKQAWRFSSSVDSGAFKAANSDKVKQAEESLRTVMYLSCWGPN 162

[Close]

BLAST of CaUC02G027230 vs. ExPASy TrEMBL
Match: A0A6J5X0Y0 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS24518 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 2.5e-05
Identity = 32/58 (55.17%), Postives = 38/58 (65.52%), Query Frame = 0


Query: 26 PNCTSTKFSSSSSSKHPTKFPHNGSI-SGAKHGGDRDKFKKAEESLRTVMYLSCWGPN 83
          P C  +  SSSSSS     +  + S+ SGA    + DK K+AEESLRTVMYLSCWGPN
Sbjct: 26 PKCGGSSSSSSSSSSSKQAWRFSSSVDSGAFKAANSDKVKQAEESLRTVMYLSCWGPN 83

[Close]

BLAST of CaUC02G027230 vs. ExPASy TrEMBL
Match: A0A067JLI7 (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_21346 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 4.3e-05
Identity = 31/49 (63.27%), Postives = 33/49 (67.35%), Query Frame = 0


Query: 34 SSSSSSKHPTKFPHNGSISGAKHGGDRDKFKKAEESLRTVMYLSCWGPN 83
          +SSSSSK    F    S SGA      DK K+AEESLRTVMYLSCWGPN
Sbjct: 42 ASSSSSKQARLFSGAVSDSGAFKANKNDKLKQAEESLRTVMYLSCWGPN 90

[Close]

BLAST of CaUC02G027230 vs. TAIR 10
Match: AT4G10270.1 (Wound-responsive family protein )

HSP 1 Score: 49.7 bits (117), Expect = 1.3e-06
Identity = 28/51 (54.90%), Postives = 31/51 (60.78%), Query Frame = 0


Query: 32 KFSSSSSSKHPTKFPHNGSISGAKHGGDRDKFKKAEESLRTVMYLSCWGPN 83
          +FSSSS S   T              G+ +K KKAEESLRTVMYLSCWGPN
Sbjct: 52 RFSSSSVSAAVTS------------SGESEKAKKAEESLRTVMYLSCWGPN 90

[Close]

BLAST of CaUC02G027230 vs. TAIR 10
Match: AT4G10265.1 (Wound-responsive family protein )

HSP 1 Score: 45.1 bits (105), Expect = 3.3e-05
Identity = 18/22 (81.82%), Postives = 21/22 (95.45%), Query Frame = 0


Query: 61 DKFKKAEESLRTVMYLSCWGPN 83
          +K K+AEESLRTVMYLSCWGP+
Sbjct: 62 NKTKQAEESLRTVMYLSCWGPS 83

The following BLAST results are available for this feature:

BLAST of CaUC02G027230 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN43575.1	3.8e-19	75.31	hypothetical protein Csa_020190 [Cucumis sativus]	[more]
KAG6572336.1	6.2e-14	57.30	hypothetical protein SDJN03_29064, partial [Cucurbita argyrosperma subsp. sorori...	[more]
VVA23499.1	5.3e-05	55.17	PREDICTED: wound-responsive family [Prunus dulcis]	[more]
VVA23500.1	5.3e-05	55.17	PREDICTED: wound-responsive family [Prunus dulcis]	[more]
CAB4306323.1	5.3e-05	55.17	unnamed protein product [Prunus armeniaca]	[more]

BLAST of CaUC02G027230 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CaUC02G027230 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K1Q2	1.8e-19	75.31	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G046140 PE=4 SV=1	[more]
A0A5E4F7V9	2.5e-05	55.17	PREDICTED: wound-responsive family OS=Prunus dulcis OX=3755 GN=ALMOND_2B003799 P...	[more]
A0A5E4F8Y8	2.5e-05	55.17	PREDICTED: wound-responsive family OS=Prunus dulcis OX=3755 GN=ALMOND_2B003799 P...	[more]
A0A6J5X0Y0	2.5e-05	55.17	Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS24518 PE=...	[more]
A0A067JLI7	4.3e-05	63.27	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_21346 PE=4 SV=1	[more]

BLAST of CaUC02G027230 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G10270.1	1.3e-06	54.90	Wound-responsive family protein	[more]
AT4G10265.1	3.3e-05	81.82	Wound-responsive family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022251	Protein of unknown function wound-induced	PFAM	PF12609	DUF3774	coord: 34..81 e-value: 1.7E-11 score: 45.0
IPR022251	Protein of unknown function wound-induced	PANTHER	PTHR33090	DUF3774 DOMAIN PROTEIN-RELATED	coord: 4..82
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..61
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..46
None	No IPR available	PANTHER	PTHR33090:SF27	SUBFAMILY NOT NAMED	coord: 4..82

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC02G027230.1	CaUC02G027230.1	mRNA