CaUC01G018260 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC01G018260
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	protein SCO1 homolog 2, mitochondrial
Location	Ciama_Chr01: 31656039 .. 31658618 (+)
RNA-Seq Expression	CaUC01G018260
Synteny	CaUC01G018260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAATCTTTATACCCCTAATAAAAAAATAGTCCTAATTTTATTTATTTGCAATTTTGCGGGGATACTTGTAGGAGGTAAGCGAGCTTGGGGAGGAAGGCAACTGGGGAGATTGAACACAGTCAATTTGATTAACGATTGGCATAGGTTTTGATTATTGAGAACCTCATGAAAAACCCCCTCTCTCCACTCAACAAATAATGCTCACTTTTCGTTCTATTTTCTCTCCCTCCAAACACCACTCCCCCCAGGCTCGATCTCTACTTCACAGGTTTTTCCCTTAAATCCCCCTCTGTTCTCTTGTGTTTGTTTACTCTTTATATGGCTGCCTATTATCCAAATGCCCCCATCTGCATACAATTCTCCTGCTCTCTCTGTTTCTCATTTCTATTAATGCAATTCCATGTTTTCGGTTGTGGAGGCCTAGGGTTTTGACTCTGGACTTCCAACTTCAAATGTCATTTTATTGCTTTCGGATTCTAAGGACTTGGGTGATCATGAATCCCGTTTCTTCTAATGAAACTATGCCATTTAGCTGATAATCCACTGTAACTTCCAATACAGTTGTGTACTATATTGATAGTCACTGCTTACTAACACAACTTTGCTGTCAACCTGGTTAATTTTTATGTAGGTTACATCCATCAATTACCGTTCGGTCCTCCAAATATTCCACATCATCAAAATACAGTAAGGAAAAACCAGAAGTCCGTCCTGTTCTTTCTGTAGATGAACATACTTCTCGTTCATGGGATACTTATATCATTGTATGACCTGACCCTCATCTTTTAGATTCAAGTTTCTTTTTGTTGGGTAAATACAATTTTGTGATCGCATTCATTTTACCTTATTTTATGTTCCTTTACCTTACATTACTATTATATATTAATCATCATAATGCCTTTTTCAACTTCTCTACTTTACTATTGTTACTATTTTTGTGCAGCCAGCTGCGGTGATGGGCTTTGTCGGTTTAGTAGCCTATGTTCAGTATAACGATGAGAGAAGAGTTGTCTTGAAAGGTTATTATCTTTGTGCTCTTCTATTTAATTCTGGCTACCATTGTTAATTAGTTGCACTGTAAATTAGTTTCAGTAGTTTATTGTCTATATGAAGATTTAAGAAAGAAAATATGGCACTAACAGTCCTGTTAGGACTTGGGATGACCTCAAGAAACCGTAGATACTTGTGCAATCATCCAGTAGTTATTGTGGATTTCCTTGACTCCTCTATGCTCAGGGTAGAGATATGAGGAAGTAGAAGATGGGAAAATCTTGGATGGCCTGAATCATTACCTCCTTATATGTGGATTACGAAAATGTTTAGATTTGTGCATATGAGCAGGCATTATAGGCATATCCCACTTGCATAATCTGATTATCTCTACACTAGACTCGGAAGTTATGGGCTGTTTCAACTCATGATAATGGATGGCAGTGGTTAAATTGTTGAACTAGCGTTGTACTACTGTATGATCAAGTTTATGCCTCTGAAGATTTTTGCATGCACATGACTTTTAATAAGCCTGAGGCAGCAGGTAGTATAATTTTTGGATTGATTTTAGGGGCCATATTTTAATGCTTCAGATTTAAAGACAACTGAAGTGTTTTCTTTGATTCAGGACAGGGAAACACATCTGTAAACGTAGTTAAAGGACCAGTTATTGGGGGCCCTTTTGCTCTTATTGATACAGAGAAAAGAATTGTAACAGAGAAAGATCTTCGGGGGAATTGGACTCTCCTCTACTTTGGCTACACTTTGTCTCCTGATGTTGTGCCAGAGCAACTCCAGATTCTATCTAAGGCTATAGACATATTAGGTATTTGACTACTTTAAATAATGCAACATTTTTGTTATCTGTCTATATGGTGTTGGCATTTACTTCCACTTGTTTTAATTATTTGTTTATTGTCTGTGAATAGAATCTAGACATAACCACAAGGTTCTACCTGTATTTGTGACAATTGATCCACAACGGGATAACCCATCTCATCTTCGTGCTTACCTTAAAGGTCAGTCTCTTCCTCTTCCTGAAGATATGTTAAGGCAAATGGTGGACGTTTCTCTTATTTTTCCCATCGTCTATGGACTGCAGAGTTTGATCCAAGAATTATAGGACTGACTGGACCAGTTGCAGCAGTAAGGGAAATGGCACAGGAATACCGTGTTTACTTTAAGAAGGTTGAAGAGGAAGGCAATGATTATCTTATTGATTCTTCACACAAAATGTAAGCTACCTAACACTGTTGAATCTAAGTTTCATATTACGACTTGAATAATAATGTATGTATGATGGGGGAAAACAATCAGGTATTTGTTGAGTCCAAAGCTGGAGGTTCTGAGCTGCTTTGGAATCGAGTACAATGCTGAAGAGCTATCAGAAGCCATACTGAATTTACTTCAGAAAACTCCTCAATAACGACCTACAGGTCTTCAAGATCTCTCCTCTGCCCTCCTATTTGTTCTAAGTTTCTTTCTAGTCATCCAGTGAAAGCATTCGAGATGTTGGCTCGACTTTATTACCTGAATTTCAACCCTTCAGAAGTCCATTAGTAGTATAATACTGTAAACAGAAAAGGCAA

mRNA sequence

AAAATCTTTATACCCCTAATAAAAAAATAGTCCTAATTTTATTTATTTGCAATTTTGCGGGGATACTTGTAGGAGGTAAGCGAGCTTGGGGAGGAAGGCAACTGGGGAGATTGAACACAGTCAATTTGATTAACGATTGGCATAGGTTTTGATTATTGAGAACCTCATGAAAAACCCCCTCTCTCCACTCAACAAATAATGCTCACTTTTCGTTCTATTTTCTCTCCCTCCAAACACCACTCCCCCCAGGCTCGATCTCTACTTCACAGGTTACATCCATCAATTACCGTTCGGTCCTCCAAATATTCCACATCATCAAAATACAGTAAGGAAAAACCAGAAGTCCGTCCTGTTCTTTCTGTAGATGAACATACTTCTCGTTCATGGGATACTTATATCATTCCAGCTGCGGTGATGGGCTTTGTCGGTTTAGTAGCCTATGTTCAGTATAACGATGAGAGAAGAGTTGTCTTGAAAGGTTATTATCTTTTCCTGTTAGGACTTGGGATGACCTCAAGAAACCGTAGATACTTGTGCAATCATCCAGTAGTTATTGTGGATTTCCTTGACTCCTCTATGCTCAGGGGAAACACATCTGTAAACGTAGTTAAAGGACCAGTTATTGGGGGCCCTTTTGCTCTTATTGATACAGAGAAAAGAATTGTAACAGAGAAAGATCTTCGGGGGAATTGGACTCTCCTCTACTTTGGCTACACTTTGTCTCCTGATGTTGTGCCAGAGCAACTCCAGATTCTATCTAAGGCTATAGACATATTAGAATCTAGACATAACCACAAGGTTCTACCTGTATTTGTGACAATTGATCCACAACGGGATAACCCATCTCATCTTCGTGCTTACCTTAAAGAGTTTGATCCAAGAATTATAGGACTGACTGGACCAGTTGCAGCAGTAAGGGAAATGGCACAGGAATACCGTGTTTACTTTAAGAAGGTTGAAGAGGAAGGCAATGATTATCTTATTGATTCTTCACACAAAATGTATTTGTTGAGTCCAAAGCTGGAGGTTCTGAGCTGCTTTGGAATCGAGTACAATGCTGAAGAGCTATCAGAAGCCATACTGAATTTACTTCAGAAAACTCCTCAATAACGACCTACAGGTCTTCAAGATCTCTCCTCTGCCCTCCTATTTGTTCTAAGTTTCTTTCTAGTCATCCAGTGAAAGCATTCGAGATGTTGGCTCGACTTTATTACCTGAATTTCAACCCTTCAGAAGTCCATTAGTAGTATAATACTGTAAACAGAAAAGGCAA

Coding sequence (CDS)

ATGCTCACTTTTCGTTCTATTTTCTCTCCCTCCAAACACCACTCCCCCCAGGCTCGATCTCTACTTCACAGGTTACATCCATCAATTACCGTTCGGTCCTCCAAATATTCCACATCATCAAAATACAGTAAGGAAAAACCAGAAGTCCGTCCTGTTCTTTCTGTAGATGAACATACTTCTCGTTCATGGGATACTTATATCATTCCAGCTGCGGTGATGGGCTTTGTCGGTTTAGTAGCCTATGTTCAGTATAACGATGAGAGAAGAGTTGTCTTGAAAGGTTATTATCTTTTCCTGTTAGGACTTGGGATGACCTCAAGAAACCGTAGATACTTGTGCAATCATCCAGTAGTTATTGTGGATTTCCTTGACTCCTCTATGCTCAGGGGAAACACATCTGTAAACGTAGTTAAAGGACCAGTTATTGGGGGCCCTTTTGCTCTTATTGATACAGAGAAAAGAATTGTAACAGAGAAAGATCTTCGGGGGAATTGGACTCTCCTCTACTTTGGCTACACTTTGTCTCCTGATGTTGTGCCAGAGCAACTCCAGATTCTATCTAAGGCTATAGACATATTAGAATCTAGACATAACCACAAGGTTCTACCTGTATTTGTGACAATTGATCCACAACGGGATAACCCATCTCATCTTCGTGCTTACCTTAAAGAGTTTGATCCAAGAATTATAGGACTGACTGGACCAGTTGCAGCAGTAAGGGAAATGGCACAGGAATACCGTGTTTACTTTAAGAAGGTTGAAGAGGAAGGCAATGATTATCTTATTGATTCTTCACACAAAATGTATTTGTTGAGTCCAAAGCTGGAGGTTCTGAGCTGCTTTGGAATCGAGTACAATGCTGAAGAGCTATCAGAAGCCATACTGAATTTACTTCAGAAAACTCCTCAATAA

Protein sequence

MLTFRSIFSPSKHHSPQARSLLHRLHPSITVRSSKYSTSSKYSKEKPEVRPVLSVDEHTSRSWDTYIIPAAVMGFVGLVAYVQYNDERRVVLKGYYLFLLGLGMTSRNRRYLCNHPVVIVDFLDSSMLRGNTSVNVVKGPVIGGPFALIDTEKRIVTEKDLRGNWTLLYFGYTLSPDVVPEQLQILSKAIDILESRHNHKVLPVFVTIDPQRDNPSHLRAYLKEFDPRIIGLTGPVAAVREMAQEYRVYFKKVEEEGNDYLIDSSHKMYLLSPKLEVLSCFGIEYNAEELSEAILNLLQKTPQ

Homology

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BLAST of CaUC01G018260 vs. NCBI nr
Match: KAG6604025.1 (Protein SCO1-like 2, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034189.1 Protein SCO1-like 2, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 453.0 bits (1164), Expect = 2.1e-123
Identity = 232/301 (77.08%), Postives = 248/301 (82.39%), Query Frame = 0


Query: 1   MLTFRSIFSPSKHHSPQARSLLHRLHPSITVRSSKYSTSSKYSKEKPEVRPVLSVDEHTS 60
           MLT RSIFSPSK HSP AR LL RLHPSI+VRS +YST+SKY+KE+PEV PV+SVD HTS
Sbjct: 1   MLTSRSIFSPSKLHSPHARCLLRRLHPSISVRSCRYSTASKYNKERPEVHPVISVDAHTS 60

Query: 61  RSWDTYIIPAAVMGFVGLVAYVQYNDERRVVLKGYYLFLLGLGMTSRNRRYLCNHPVVIV 120
           RSW TYIIPAAVMGFVGL A+V YNDERR VLKG                          
Sbjct: 61  RSWATYIIPAAVMGFVGLAAFVHYNDERRAVLKG-------------------------- 120

Query: 121 DFLDSSMLRGNTSVNVVKGPVIGGPFALIDTEKRIVTEKDLRGNWTLLYFGYTLSPDVVP 180
                   +G+TSVNVVKGPVIGGPFALIDTEKRIVTEKDLRGNWTLLYFGYT SPDVVP
Sbjct: 121 --------QGSTSVNVVKGPVIGGPFALIDTEKRIVTEKDLRGNWTLLYFGYTSSPDVVP 180

Query: 181 EQLQILSKAIDILESRHNHKVLPVFVTIDPQRDNPSHLRAYLKEFDPRIIGLTGPVAAVR 240
           EQLQI+SKAI+ILESRHN KV PVFVTIDPQRDNPSHLRAYLKEFDPRIIGLTG VAAVR
Sbjct: 181 EQLQIMSKAINILESRHNVKVRPVFVTIDPQRDNPSHLRAYLKEFDPRIIGLTGQVAAVR 240

Query: 241 EMAQEYRVYFKKVEEEGNDYLIDSSHKMYLLSPKLEVLSCFGIEYNAEELSEAILNLLQK 300
           +MAQEYRVYFKK+EE+GNDYLIDSSHKMYLLSP LEV+ CFGIEYNAEELS+AILN LQK
Sbjct: 241 QMAQEYRVYFKKIEEDGNDYLIDSSHKMYLLSPNLEVMRCFGIEYNAEELSQAILNALQK 267

Query: 301 T 302
           T
Sbjct: 301 T 267

[Close]

BLAST of CaUC01G018260 vs. NCBI nr
Match: XP_023544547.1 (protein SCO1 homolog 2, mitochondrial isoform X1 [Cucurbita pepo subsp. pepo] >XP_023544548.1 protein SCO1 homolog 2, mitochondrial isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 451.4 bits (1160), Expect = 6.0e-123
Identity = 231/301 (76.74%), Postives = 248/301 (82.39%), Query Frame = 0


Query: 1   MLTFRSIFSPSKHHSPQARSLLHRLHPSITVRSSKYSTSSKYSKEKPEVRPVLSVDEHTS 60
           MLT RSIFSPSK HSP AR LL RLHPSI+VRS  YST+SKY+KE+PEV PV+SVD HTS
Sbjct: 1   MLTSRSIFSPSKPHSPHARCLLQRLHPSISVRSCGYSTASKYNKERPEVHPVISVDAHTS 60

Query: 61  RSWDTYIIPAAVMGFVGLVAYVQYNDERRVVLKGYYLFLLGLGMTSRNRRYLCNHPVVIV 120
           RSW TYIIPAAVMGFVGL A+V YNDERR VLKG                          
Sbjct: 61  RSWATYIIPAAVMGFVGLAAFVHYNDERRAVLKG-------------------------- 120

Query: 121 DFLDSSMLRGNTSVNVVKGPVIGGPFALIDTEKRIVTEKDLRGNWTLLYFGYTLSPDVVP 180
                   +G+TSVNVV+GPVIGGPFALIDTEKRIVTEKDLRGNWTLLYFGYT SPDVVP
Sbjct: 121 --------QGSTSVNVVQGPVIGGPFALIDTEKRIVTEKDLRGNWTLLYFGYTSSPDVVP 180

Query: 181 EQLQILSKAIDILESRHNHKVLPVFVTIDPQRDNPSHLRAYLKEFDPRIIGLTGPVAAVR 240
           EQLQI+SKAI+ILESRH+ KV PVFVTIDPQRDNPSHLRAYLKEFDPRIIGLTGPVAAVR
Sbjct: 181 EQLQIMSKAINILESRHSVKVRPVFVTIDPQRDNPSHLRAYLKEFDPRIIGLTGPVAAVR 240

Query: 241 EMAQEYRVYFKKVEEEGNDYLIDSSHKMYLLSPKLEVLSCFGIEYNAEELSEAILNLLQK 300
           +MAQEYRVYFKK+EE+GNDYLIDSSHKMYLLSP LEV+ CFGIEYNAEELS+AILN LQK
Sbjct: 241 QMAQEYRVYFKKIEEDGNDYLIDSSHKMYLLSPNLEVMRCFGIEYNAEELSQAILNALQK 267

Query: 301 T 302
           T
Sbjct: 301 T 267

[Close]

BLAST of CaUC01G018260 vs. NCBI nr
Match: XP_008440607.1 (PREDICTED: protein SCO1 homolog 2, mitochondrial [Cucumis melo])

HSP 1 Score: 451.4 bits (1160), Expect = 6.0e-123
Identity = 230/303 (75.91%), Postives = 248/303 (81.85%), Query Frame = 0


Query: 1   MLTFRSIFSPSKHHSPQARSLLHRLHPSITVRSSKYSTSSKYSKEKPEVRPVLSVDEHTS 60
           MLTFRSIFS SKHHS QARS+  RLHPSI+V S KYSTSSKYSKE+PEV  +LSVD HTS
Sbjct: 1   MLTFRSIFSTSKHHSRQARSVFQRLHPSISVLSCKYSTSSKYSKERPEVHSILSVDGHTS 60

Query: 61  RSWDTYIIPAAVMGFVGLVAYVQYNDERRVVLKGYYLFLLGLGMTSRNRRYLCNHPVVIV 120
            SW TYIIPAAVMGFVGL A+V YNDERR VLKG                          
Sbjct: 61  SSWTTYIIPAAVMGFVGLAAFVHYNDERRAVLKG-------------------------- 120

Query: 121 DFLDSSMLRGNTSVNVVKGPVIGGPFALIDTEKRIVTEKDLRGNWTLLYFGYTLSPDVVP 180
                   +GNT VN+VKGPVIGGPF+LIDTEKR VTEKDLRGNWTLLYFGYT SPDVVP
Sbjct: 121 --------QGNTCVNIVKGPVIGGPFSLIDTEKRNVTEKDLRGNWTLLYFGYTSSPDVVP 180

Query: 181 EQLQILSKAIDILESRHNHKVLPVFVTIDPQRDNPSHLRAYLKEFDPRIIGLTGPVAAVR 240
           EQLQI+SKAIDILES+H+ KVLP+FVTIDPQRDNPSHLRAYLKEFD RIIGLTGPVAAVR
Sbjct: 181 EQLQIMSKAIDILESKHSLKVLPIFVTIDPQRDNPSHLRAYLKEFDSRIIGLTGPVAAVR 240

Query: 241 EMAQEYRVYFKKVEEEGNDYLIDSSHKMYLLSPKLEVLSCFGIEYNAEELSEAILNLLQK 300
           +MAQEYRVYFKKVEEEGNDYLID+SHKMYLLSP LEVL CFG+EYNAEE+S+AILN+LQK
Sbjct: 241 QMAQEYRVYFKKVEEEGNDYLIDTSHKMYLLSPNLEVLRCFGMEYNAEEVSQAILNVLQK 269

Query: 301 TPQ 304
           TPQ
Sbjct: 301 TPQ 269

[Close]

BLAST of CaUC01G018260 vs. NCBI nr
Match: XP_022949607.1 (protein SCO1 homolog 2, mitochondrial isoform X1 [Cucurbita moschata])

HSP 1 Score: 450.3 bits (1157), Expect = 1.3e-122
Identity = 230/301 (76.41%), Postives = 248/301 (82.39%), Query Frame = 0


Query: 1   MLTFRSIFSPSKHHSPQARSLLHRLHPSITVRSSKYSTSSKYSKEKPEVRPVLSVDEHTS 60
           MLT RSIFSPSK HSP AR LL RLHPSI+VRS +YST+SKY+KE+PEV PV+SVD HTS
Sbjct: 1   MLTSRSIFSPSKLHSPHARCLLRRLHPSISVRSCRYSTASKYNKERPEVHPVISVDAHTS 60

Query: 61  RSWDTYIIPAAVMGFVGLVAYVQYNDERRVVLKGYYLFLLGLGMTSRNRRYLCNHPVVIV 120
           RSW TYIIPAAVMGFVGL A+V YNDERR VLKG                          
Sbjct: 61  RSWATYIIPAAVMGFVGLAAFVHYNDERRAVLKG-------------------------- 120

Query: 121 DFLDSSMLRGNTSVNVVKGPVIGGPFALIDTEKRIVTEKDLRGNWTLLYFGYTLSPDVVP 180
                   +G+TSVNVVKGPVIGGPFALIDTEKRIVTEKDLRGNWTLLYFGYT SPDVVP
Sbjct: 121 --------QGSTSVNVVKGPVIGGPFALIDTEKRIVTEKDLRGNWTLLYFGYTSSPDVVP 180

Query: 181 EQLQILSKAIDILESRHNHKVLPVFVTIDPQRDNPSHLRAYLKEFDPRIIGLTGPVAAVR 240
           EQLQI+SKAI+ILESRH+ KV PVFVTIDPQRDNPSHL AYLKEFDPR+IGLTGPVAAVR
Sbjct: 181 EQLQIMSKAINILESRHSVKVRPVFVTIDPQRDNPSHLCAYLKEFDPRLIGLTGPVAAVR 240

Query: 241 EMAQEYRVYFKKVEEEGNDYLIDSSHKMYLLSPKLEVLSCFGIEYNAEELSEAILNLLQK 300
           +MAQEYRVYFKK+EE+GNDYLIDSSHKMYLLSP LEV+ CFGIEYNAEELS+AILN LQK
Sbjct: 241 QMAQEYRVYFKKIEEDGNDYLIDSSHKMYLLSPNLEVMRCFGIEYNAEELSQAILNALQK 267

Query: 301 T 302
           T
Sbjct: 301 T 267

[Close]

BLAST of CaUC01G018260 vs. NCBI nr
Match: XP_022978543.1 (protein SCO1 homolog 2, mitochondrial isoform X1 [Cucurbita maxima])

HSP 1 Score: 449.5 bits (1155), Expect = 2.3e-122
Identity = 230/301 (76.41%), Postives = 248/301 (82.39%), Query Frame = 0


Query: 1   MLTFRSIFSPSKHHSPQARSLLHRLHPSITVRSSKYSTSSKYSKEKPEVRPVLSVDEHTS 60
           MLT RSIFSPSK  SP AR LL RLHPSI+VRS +YST+SKY+KE+PEV PV+SVD HTS
Sbjct: 1   MLTSRSIFSPSKLPSPHARCLLQRLHPSISVRSCRYSTTSKYNKERPEVHPVISVDAHTS 60

Query: 61  RSWDTYIIPAAVMGFVGLVAYVQYNDERRVVLKGYYLFLLGLGMTSRNRRYLCNHPVVIV 120
           RSW TYIIPAAVMGFVGL A+V YNDERR VLKG                          
Sbjct: 61  RSWATYIIPAAVMGFVGLAAFVHYNDERRAVLKG-------------------------- 120

Query: 121 DFLDSSMLRGNTSVNVVKGPVIGGPFALIDTEKRIVTEKDLRGNWTLLYFGYTLSPDVVP 180
                   +G+TSVNVVKGPVIGGPFALIDTEKRIVTEKDLRGNWTLLYFGYT SPDVVP
Sbjct: 121 --------QGSTSVNVVKGPVIGGPFALIDTEKRIVTEKDLRGNWTLLYFGYTSSPDVVP 180

Query: 181 EQLQILSKAIDILESRHNHKVLPVFVTIDPQRDNPSHLRAYLKEFDPRIIGLTGPVAAVR 240
           EQLQI+SKA++ILESRH+ KV PVFVTIDPQRDNPSHLRAYLKEFDPRIIGLTGPVAAVR
Sbjct: 181 EQLQIMSKALNILESRHSVKVRPVFVTIDPQRDNPSHLRAYLKEFDPRIIGLTGPVAAVR 240

Query: 241 EMAQEYRVYFKKVEEEGNDYLIDSSHKMYLLSPKLEVLSCFGIEYNAEELSEAILNLLQK 300
           +MAQEYRVYFKK+EE+GNDYLIDSSHKMYLLSP LEV+ CFGIEYNAEELS+AILN LQK
Sbjct: 241 QMAQEYRVYFKKIEEDGNDYLIDSSHKMYLLSPNLEVMRCFGIEYNAEELSQAILNALQK 267

Query: 301 T 302
           T
Sbjct: 301 T 267

[Close]

BLAST of CaUC01G018260 vs. ExPASy Swiss-Prot
Match: Q8LAL0 (Protein SCO1 homolog 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=HCC2 PE=2 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 4.7e-78
Identity = 148/290 (51.03%), Postives = 191/290 (65.86%), Query Frame = 0


Query: 17  QARSLLHRLHPSITVRSSKYSTSSKYSKEKPEVRPVLSVDEHT---SRSWDTYIIPAAVM 76
           QA S L R  PS  ++S  Y  S++   E P+V+P+      T   SRS   Y +PA ++
Sbjct: 14  QAASFLRRCGPSKRIQSVNYCKSTRQGHEIPDVKPLFPTGGGTQAPSRSRARYAVPAILL 73

Query: 77  GFVGLVAYVQYNDERRVVLKGYYLFLLGLGMTSRNRRYLCNHPVVIVDFLDSSMLRGNTS 136
           GF G V ++ YNDERR V +G      G G  S                        NT+
Sbjct: 74  GFAGFVGFLHYNDERRAVPRGQASSNSGCGCGS------------------------NTT 133

Query: 137 VNVVKGPVIGGPFALIDTEKRIVTEKDLRGNWTLLYFGYTLSPDVVPEQLQILSKAIDIL 196
              VKGP+IGGPF L+ TE +IVTE D  G W LLYFGY+ SPDV PEQL+++SKA+D L
Sbjct: 134 ---VKGPIIGGPFTLVSTENKIVTENDFCGKWVLLYFGYSFSPDVGPEQLKMMSKAVDKL 193

Query: 197 ESRHNHKVLPVFVTIDPQRDNPSHLRAYLKEFDPRIIGLTGPVAAVREMAQEYRVYFKKV 256
           ES+HN K+LPVFVT+DPQRD PSHL AYLKEFD RI+GLTG  +A+R+MAQEYRVYFKKV
Sbjct: 194 ESKHNEKILPVFVTLDPQRDTPSHLHAYLKEFDSRILGLTGTASAMRQMAQEYRVYFKKV 253

Query: 257 EEEGNDYLIDSSHKMYLLSPKLEVLSCFGIEYNAEELSEAILNLLQKTPQ 304
           +E+G DYL+D+SH MYL++PK+E++ CFG+EYN +ELS+ +L  +    Q
Sbjct: 254 QEDGEDYLVDTSHNMYLINPKMEIVRCFGVEYNPDELSQELLKEVASVSQ 276

[Close]

BLAST of CaUC01G018260 vs. ExPASy Swiss-Prot
Match: Q8VYP0 (Protein SCO1 homolog 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=HCC1 PE=1 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.0e-37
Identity = 71/173 (41.04%), Postives = 116/173 (67.05%), Query Frame = 0


Query: 133 SVNVVKGP-----VIGGPFALIDTEKRIVTEKDLRGNWTLLYFGYTLSPDVVPEQLQILS 192
           S+ V +GP      IGGPF+LI  + + VTEK+L G WT+LYFG+T  PD+ P++L  L+
Sbjct: 159 SIAVKEGPSAGKAAIGGPFSLIRDDGKRVTEKNLMGKWTILYFGFTHCPDICPDELIKLA 218

Query: 193 KAIDILESRHNHKVLPVFVTIDPQRDNPSHLRAYLKEFDPRIIGLTGPVAAVREMAQEYR 252
            AID ++      V+PVF+++DP+RD    +  Y+KEF P++IGLTG    ++ +A+ YR
Sbjct: 219 AAIDKIKENSGVDVVPVFISVDPERDTVQQVHEYVKEFHPKLIGLTGSPEEIKSVARSYR 278

Query: 253 VYFKKVEEEGNDYLIDSSHKMYLLSPKLEVLSCFGIEYNAEELSEAILNLLQK 301
           VY+ K EEE +DYL+D S  MYL+SP++  +  +G  ++ + L++ ++  +++
Sbjct: 279 VYYMKTEEEDSDYLVDHSIVMYLMSPEMNFVKFYGKNHDVDSLTDGVVKEIRQ 331

[Close]

BLAST of CaUC01G018260 vs. ExPASy Swiss-Prot
Match: O42899 (Protein sco1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=sco1 PE=3 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 5.0e-32
Identity = 62/158 (39.24%), Postives = 103/158 (65.19%), Query Frame = 0


Query: 140 PVIGGPFALIDTEKRIVTEKDLRGNWTLLYFGYTLSPDVVPEQLQILSKAIDILESRHNH 199
           P +GG F+LID     VT+ D +G ++L+YFG+T  PD+ P++L  +S AIDI+ +    
Sbjct: 95  PQLGGAFSLIDHHGNRVTDNDFKGKFSLIYFGFTRCPDICPDELDKMSAAIDIVNNVVGD 154

Query: 200 KVLPVFVTIDPQRDNPSHLRAYLKEFDPRIIGLTGPVAAVREMAQEYRVYF---KKVEEE 259
            V P+F+T DP RD P  +  YL++F+P+I+GLTG    ++++ +++RVYF   K ++ +
Sbjct: 155 VVYPIFITCDPARDPPQEMAEYLEDFNPKIVGLTGSYEEIKDICKKFRVYFSTPKNIDPK 214

Query: 260 GNDYLIDSSHKMYLLSPKLEVLSCFGIEYNAEELSEAI 295
            +DYL+D S   YL+ P+ + +  FG    +E+L+ AI
Sbjct: 215 KDDYLVDHSVFFYLMDPEGKFIEVFGRNSTSEDLARAI 252

[Close]

BLAST of CaUC01G018260 vs. ExPASy Swiss-Prot
Match: A1A4J8 (Protein SCO1 homolog, mitochondrial OS=Bos taurus OX=9913 GN=SCO1 PE=2 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 1.3e-27
Identity = 59/157 (37.58%), Postives = 96/157 (61.15%), Query Frame = 0


Query: 140 PVIGGPFALIDTEKRIVTEKDLRGNWTLLYFGYTLSPDVVPEQLQILSKAIDILESRHN- 199
           P++GGPF+L        T+KD  G W L+YFG+T  PD+ PE+L+ + + +D ++S    
Sbjct: 138 PLLGGPFSLTTHTGEPKTDKDYLGQWVLIYFGFTHCPDICPEELEKMIQVVDEIDSIPTL 197

Query: 200 HKVLPVFVTIDPQRDNPSHLRAYLKEFDPRIIGLTGPVAAVREMAQEYRVYFKK-VEEEG 259
             + P+F+TIDP+RD    +  Y+KEF P++IGLTG    + ++A+ +RVY+    ++E 
Sbjct: 198 PNLTPLFITIDPERDTKEAIANYVKEFSPKLIGLTGTKEEIDQVARAFRVYYSPGPKDED 257

Query: 260 NDYLIDSSHKMYLLSPKLEVLSCFGIEYNAEELSEAI 295
            DY++D +  MYL+ P  E L  FG      E++ +I
Sbjct: 258 EDYIVDHTIIMYLIGPDGEFLDYFGQNKKNAEIAGSI 294

[Close]

BLAST of CaUC01G018260 vs. ExPASy Swiss-Prot
Match: Q5SUC9 (Protein SCO1 homolog, mitochondrial OS=Mus musculus OX=10090 GN=Sco1 PE=1 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 1.3e-27
Identity = 58/157 (36.94%), Postives = 96/157 (61.15%), Query Frame = 0


Query: 140 PVIGGPFALIDTEKRIVTEKDLRGNWTLLYFGYTLSPDVVPEQLQILSKAIDILESRHN- 199
           P++GGPF+L        T+KD  G W L+YFG+T  PD+ PE+L+ + + ++ ++S  + 
Sbjct: 117 PLLGGPFSLTTHNGEPKTDKDYLGQWVLIYFGFTHCPDICPEELEKMIEVVEEIDSIPSL 176

Query: 200 HKVLPVFVTIDPQRDNPSHLRAYLKEFDPRIIGLTGPVAAVREMAQEYRVYFKK-VEEEG 259
             + P+F+TIDP+RD    +  Y+KEF P+++GLTG    +  +A+ YRVY+    ++E 
Sbjct: 177 PNLTPLFITIDPERDTKEAIATYVKEFSPKLVGLTGTKEEIDGVARAYRVYYSPGPKDED 236

Query: 260 NDYLIDSSHKMYLLSPKLEVLSCFGIEYNAEELSEAI 295
            DY++D +  MYL+ P  E L  FG      E++ +I
Sbjct: 237 EDYIVDHTIIMYLIGPDGEFLDYFGQNKKKAEIAGSI 273

[Close]

BLAST of CaUC01G018260 vs. ExPASy TrEMBL
Match: A0A1S3B131 (protein SCO1 homolog 2, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103484980 PE=3 SV=1)

HSP 1 Score: 451.4 bits (1160), Expect = 2.9e-123
Identity = 230/303 (75.91%), Postives = 248/303 (81.85%), Query Frame = 0


Query: 1   MLTFRSIFSPSKHHSPQARSLLHRLHPSITVRSSKYSTSSKYSKEKPEVRPVLSVDEHTS 60
           MLTFRSIFS SKHHS QARS+  RLHPSI+V S KYSTSSKYSKE+PEV  +LSVD HTS
Sbjct: 1   MLTFRSIFSTSKHHSRQARSVFQRLHPSISVLSCKYSTSSKYSKERPEVHSILSVDGHTS 60

Query: 61  RSWDTYIIPAAVMGFVGLVAYVQYNDERRVVLKGYYLFLLGLGMTSRNRRYLCNHPVVIV 120
            SW TYIIPAAVMGFVGL A+V YNDERR VLKG                          
Sbjct: 61  SSWTTYIIPAAVMGFVGLAAFVHYNDERRAVLKG-------------------------- 120

Query: 121 DFLDSSMLRGNTSVNVVKGPVIGGPFALIDTEKRIVTEKDLRGNWTLLYFGYTLSPDVVP 180
                   +GNT VN+VKGPVIGGPF+LIDTEKR VTEKDLRGNWTLLYFGYT SPDVVP
Sbjct: 121 --------QGNTCVNIVKGPVIGGPFSLIDTEKRNVTEKDLRGNWTLLYFGYTSSPDVVP 180

Query: 181 EQLQILSKAIDILESRHNHKVLPVFVTIDPQRDNPSHLRAYLKEFDPRIIGLTGPVAAVR 240
           EQLQI+SKAIDILES+H+ KVLP+FVTIDPQRDNPSHLRAYLKEFD RIIGLTGPVAAVR
Sbjct: 181 EQLQIMSKAIDILESKHSLKVLPIFVTIDPQRDNPSHLRAYLKEFDSRIIGLTGPVAAVR 240

Query: 241 EMAQEYRVYFKKVEEEGNDYLIDSSHKMYLLSPKLEVLSCFGIEYNAEELSEAILNLLQK 300
           +MAQEYRVYFKKVEEEGNDYLID+SHKMYLLSP LEVL CFG+EYNAEE+S+AILN+LQK
Sbjct: 241 QMAQEYRVYFKKVEEEGNDYLIDTSHKMYLLSPNLEVLRCFGMEYNAEEVSQAILNVLQK 269

Query: 301 TPQ 304
           TPQ
Sbjct: 301 TPQ 269

[Close]

BLAST of CaUC01G018260 vs. ExPASy TrEMBL
Match: A0A6J1GCL0 (protein SCO1 homolog 2, mitochondrial isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111452949 PE=3 SV=1)

HSP 1 Score: 450.3 bits (1157), Expect = 6.4e-123
Identity = 230/301 (76.41%), Postives = 248/301 (82.39%), Query Frame = 0


Query: 1   MLTFRSIFSPSKHHSPQARSLLHRLHPSITVRSSKYSTSSKYSKEKPEVRPVLSVDEHTS 60
           MLT RSIFSPSK HSP AR LL RLHPSI+VRS +YST+SKY+KE+PEV PV+SVD HTS
Sbjct: 1   MLTSRSIFSPSKLHSPHARCLLRRLHPSISVRSCRYSTASKYNKERPEVHPVISVDAHTS 60

Query: 61  RSWDTYIIPAAVMGFVGLVAYVQYNDERRVVLKGYYLFLLGLGMTSRNRRYLCNHPVVIV 120
           RSW TYIIPAAVMGFVGL A+V YNDERR VLKG                          
Sbjct: 61  RSWATYIIPAAVMGFVGLAAFVHYNDERRAVLKG-------------------------- 120

Query: 121 DFLDSSMLRGNTSVNVVKGPVIGGPFALIDTEKRIVTEKDLRGNWTLLYFGYTLSPDVVP 180
                   +G+TSVNVVKGPVIGGPFALIDTEKRIVTEKDLRGNWTLLYFGYT SPDVVP
Sbjct: 121 --------QGSTSVNVVKGPVIGGPFALIDTEKRIVTEKDLRGNWTLLYFGYTSSPDVVP 180

Query: 181 EQLQILSKAIDILESRHNHKVLPVFVTIDPQRDNPSHLRAYLKEFDPRIIGLTGPVAAVR 240
           EQLQI+SKAI+ILESRH+ KV PVFVTIDPQRDNPSHL AYLKEFDPR+IGLTGPVAAVR
Sbjct: 181 EQLQIMSKAINILESRHSVKVRPVFVTIDPQRDNPSHLCAYLKEFDPRLIGLTGPVAAVR 240

Query: 241 EMAQEYRVYFKKVEEEGNDYLIDSSHKMYLLSPKLEVLSCFGIEYNAEELSEAILNLLQK 300
           +MAQEYRVYFKK+EE+GNDYLIDSSHKMYLLSP LEV+ CFGIEYNAEELS+AILN LQK
Sbjct: 241 QMAQEYRVYFKKIEEDGNDYLIDSSHKMYLLSPNLEVMRCFGIEYNAEELSQAILNALQK 267

Query: 301 T 302
           T
Sbjct: 301 T 267

[Close]

BLAST of CaUC01G018260 vs. ExPASy TrEMBL
Match: A0A6J1ITF2 (protein SCO1 homolog 2, mitochondrial isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111478493 PE=3 SV=1)

HSP 1 Score: 449.5 bits (1155), Expect = 1.1e-122
Identity = 230/301 (76.41%), Postives = 248/301 (82.39%), Query Frame = 0


Query: 1   MLTFRSIFSPSKHHSPQARSLLHRLHPSITVRSSKYSTSSKYSKEKPEVRPVLSVDEHTS 60
           MLT RSIFSPSK  SP AR LL RLHPSI+VRS +YST+SKY+KE+PEV PV+SVD HTS
Sbjct: 1   MLTSRSIFSPSKLPSPHARCLLQRLHPSISVRSCRYSTTSKYNKERPEVHPVISVDAHTS 60

Query: 61  RSWDTYIIPAAVMGFVGLVAYVQYNDERRVVLKGYYLFLLGLGMTSRNRRYLCNHPVVIV 120
           RSW TYIIPAAVMGFVGL A+V YNDERR VLKG                          
Sbjct: 61  RSWATYIIPAAVMGFVGLAAFVHYNDERRAVLKG-------------------------- 120

Query: 121 DFLDSSMLRGNTSVNVVKGPVIGGPFALIDTEKRIVTEKDLRGNWTLLYFGYTLSPDVVP 180
                   +G+TSVNVVKGPVIGGPFALIDTEKRIVTEKDLRGNWTLLYFGYT SPDVVP
Sbjct: 121 --------QGSTSVNVVKGPVIGGPFALIDTEKRIVTEKDLRGNWTLLYFGYTSSPDVVP 180

Query: 181 EQLQILSKAIDILESRHNHKVLPVFVTIDPQRDNPSHLRAYLKEFDPRIIGLTGPVAAVR 240
           EQLQI+SKA++ILESRH+ KV PVFVTIDPQRDNPSHLRAYLKEFDPRIIGLTGPVAAVR
Sbjct: 181 EQLQIMSKALNILESRHSVKVRPVFVTIDPQRDNPSHLRAYLKEFDPRIIGLTGPVAAVR 240

Query: 241 EMAQEYRVYFKKVEEEGNDYLIDSSHKMYLLSPKLEVLSCFGIEYNAEELSEAILNLLQK 300
           +MAQEYRVYFKK+EE+GNDYLIDSSHKMYLLSP LEV+ CFGIEYNAEELS+AILN LQK
Sbjct: 241 QMAQEYRVYFKKIEEDGNDYLIDSSHKMYLLSPNLEVMRCFGIEYNAEELSQAILNALQK 267

Query: 301 T 302
           T
Sbjct: 301 T 267

[Close]

BLAST of CaUC01G018260 vs. ExPASy TrEMBL
Match: A0A0A0KIW8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G500510 PE=3 SV=1)

HSP 1 Score: 440.7 bits (1132), Expect = 5.1e-120
Identity = 228/303 (75.25%), Postives = 244/303 (80.53%), Query Frame = 0


Query: 1   MLTFRSIFSPSKHHSPQARSLLHRLHPSITVRSSKYSTSSKYSKEKPEVRPVLSVDEHTS 60
           MLTFRSIFS SKHHS QA S+  RLHPSI+V S K STSSKYSKE+PEV P+LS D HTS
Sbjct: 1   MLTFRSIFSTSKHHSRQAPSVFQRLHPSISVLSCKCSTSSKYSKERPEV-PLLSADGHTS 60

Query: 61  RSWDTYIIPAAVMGFVGLVAYVQYNDERRVVLKGYYLFLLGLGMTSRNRRYLCNHPVVIV 120
            SW TYIIPAAVMGFVGL A+V YNDERR VLKG                          
Sbjct: 61  SSWTTYIIPAAVMGFVGLAAFVHYNDERRAVLKG-------------------------- 120

Query: 121 DFLDSSMLRGNTSVNVVKGPVIGGPFALIDTEKRIVTEKDLRGNWTLLYFGYTLSPDVVP 180
                   +GNT  N+VKGPVIGGPF+LIDTEKR VTEKDLRGNWTLLYFGYT SPDVVP
Sbjct: 121 --------QGNTCENIVKGPVIGGPFSLIDTEKRNVTEKDLRGNWTLLYFGYTSSPDVVP 180

Query: 181 EQLQILSKAIDILESRHNHKVLPVFVTIDPQRDNPSHLRAYLKEFDPRIIGLTGPVAAVR 240
           EQLQI+SKAIDILESRH  KVLP+FVTIDPQRDNPSHLRAYLKEFD RIIGLTGPVAAVR
Sbjct: 181 EQLQIMSKAIDILESRHKFKVLPIFVTIDPQRDNPSHLRAYLKEFDSRIIGLTGPVAAVR 240

Query: 241 EMAQEYRVYFKKVEEEGNDYLIDSSHKMYLLSPKLEVLSCFGIEYNAEELSEAILNLLQK 300
           +MAQEYRVYFKKVEEEGNDYLID+SHKMYLLSP LEVL CFG+EYNAEE+S+AILN+LQK
Sbjct: 241 QMAQEYRVYFKKVEEEGNDYLIDTSHKMYLLSPNLEVLRCFGMEYNAEEVSQAILNVLQK 268

Query: 301 TPQ 304
           TPQ
Sbjct: 301 TPQ 268

[Close]

BLAST of CaUC01G018260 vs. ExPASy TrEMBL
Match: A0A6J1BW99 (protein SCO1 homolog 2, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111005302 PE=3 SV=1)

HSP 1 Score: 407.9 bits (1047), Expect = 3.7e-110
Identity = 211/304 (69.41%), Postives = 234/304 (76.97%), Query Frame = 0


Query: 1   MLTFRSIFSPSKHHSPQARSLLHRLHPSITVRSSKYSTSSKYSKEKPEVRPVLSVDEHTS 60
           M  F SIF  SKHH  QAR LL R HPS +VRS KYS SSKY+KE PEV P++S+DE  S
Sbjct: 1   MPIFNSIFFSSKHHFRQARGLLQRFHPSNSVRSCKYSKSSKYNKEIPEVHPLISIDEQAS 60

Query: 61  RSWDTYIIPAAVMGFVGLVAYVQYNDERRVVLKGYYLFLLGLGMTSRNRRYLCNHPVVIV 120
           RS  TY+IPAAVM FVGL A V YNDERR VLKG                          
Sbjct: 61  RSRATYVIPAAVMSFVGLAALVHYNDERRAVLKG-------------------------- 120

Query: 121 DFLDSSMLRGNTS-VNVVKGPVIGGPFALIDTEKRIVTEKDLRGNWTLLYFGYTLSPDVV 180
                   +GN+S  N+V+GP+IGGPF L DTE R+VTE++LRGNW+LLYFGYT SPDVV
Sbjct: 121 --------QGNSSDGNLVRGPIIGGPFTLTDTENRVVTEQNLRGNWSLLYFGYTSSPDVV 180

Query: 181 PEQLQILSKAIDILESRHNHKVLPVFVTIDPQRDNPSHLRAYLKEFDPRIIGLTGPVAAV 240
           PEQLQI+SKAIDILESRHN KVLPVFVTIDPQRDNPSHLRAYLKEFDPRI+GL GPVAAV
Sbjct: 181 PEQLQIMSKAIDILESRHNLKVLPVFVTIDPQRDNPSHLRAYLKEFDPRIVGLAGPVAAV 240

Query: 241 REMAQEYRVYFKKVEEEGNDYLIDSSHKMYLLSPKLEVLSCFGIEYNAEELSEAILNLLQ 300
           R+MAQEYRVYFKKVEEEG DYLI+SSHKMYLLSP LEV+ C GIEYNAEELS+AILN++Q
Sbjct: 241 RQMAQEYRVYFKKVEEEGGDYLIESSHKMYLLSPNLEVMRCCGIEYNAEELSQAILNVVQ 270

Query: 301 KTPQ 304
           KTPQ
Sbjct: 301 KTPQ 270

[Close]

BLAST of CaUC01G018260 vs. TAIR 10
Match: AT4G39740.1 (Thioredoxin superfamily protein )

HSP 1 Score: 292.7 bits (748), Expect = 3.3e-79
Identity = 148/290 (51.03%), Postives = 191/290 (65.86%), Query Frame = 0


Query: 17  QARSLLHRLHPSITVRSSKYSTSSKYSKEKPEVRPVLSVDEHT---SRSWDTYIIPAAVM 76
           QA S L R  PS  ++S  Y  S++   E P+V+P+      T   SRS   Y +PA ++
Sbjct: 14  QAASFLRRCGPSKRIQSVNYCKSTRQGHEIPDVKPLFPTGGGTQAPSRSRARYAVPAILL 73

Query: 77  GFVGLVAYVQYNDERRVVLKGYYLFLLGLGMTSRNRRYLCNHPVVIVDFLDSSMLRGNTS 136
           GF G V ++ YNDERR V +G      G G  S                        NT+
Sbjct: 74  GFAGFVGFLHYNDERRAVPRGQASSNSGCGCGS------------------------NTT 133

Query: 137 VNVVKGPVIGGPFALIDTEKRIVTEKDLRGNWTLLYFGYTLSPDVVPEQLQILSKAIDIL 196
              VKGP+IGGPF L+ TE +IVTE D  G W LLYFGY+ SPDV PEQL+++SKA+D L
Sbjct: 134 ---VKGPIIGGPFTLVSTENKIVTENDFCGKWVLLYFGYSFSPDVGPEQLKMMSKAVDKL 193

Query: 197 ESRHNHKVLPVFVTIDPQRDNPSHLRAYLKEFDPRIIGLTGPVAAVREMAQEYRVYFKKV 256
           ES+HN K+LPVFVT+DPQRD PSHL AYLKEFD RI+GLTG  +A+R+MAQEYRVYFKKV
Sbjct: 194 ESKHNEKILPVFVTLDPQRDTPSHLHAYLKEFDSRILGLTGTASAMRQMAQEYRVYFKKV 253

Query: 257 EEEGNDYLIDSSHKMYLLSPKLEVLSCFGIEYNAEELSEAILNLLQKTPQ 304
           +E+G DYL+D+SH MYL++PK+E++ CFG+EYN +ELS+ +L  +    Q
Sbjct: 254 QEDGEDYLVDTSHNMYLINPKMEIVRCFGVEYNPDELSQELLKEVASVSQ 276

[Close]

BLAST of CaUC01G018260 vs. TAIR 10
Match: AT3G08950.1 (electron transport SCO1/SenC family protein )

HSP 1 Score: 158.7 bits (400), Expect = 7.5e-39
Identity = 71/173 (41.04%), Postives = 116/173 (67.05%), Query Frame = 0


Query: 133 SVNVVKGP-----VIGGPFALIDTEKRIVTEKDLRGNWTLLYFGYTLSPDVVPEQLQILS 192
           S+ V +GP      IGGPF+LI  + + VTEK+L G WT+LYFG+T  PD+ P++L  L+
Sbjct: 159 SIAVKEGPSAGKAAIGGPFSLIRDDGKRVTEKNLMGKWTILYFGFTHCPDICPDELIKLA 218

Query: 193 KAIDILESRHNHKVLPVFVTIDPQRDNPSHLRAYLKEFDPRIIGLTGPVAAVREMAQEYR 252
            AID ++      V+PVF+++DP+RD    +  Y+KEF P++IGLTG    ++ +A+ YR
Sbjct: 219 AAIDKIKENSGVDVVPVFISVDPERDTVQQVHEYVKEFHPKLIGLTGSPEEIKSVARSYR 278

Query: 253 VYFKKVEEEGNDYLIDSSHKMYLLSPKLEVLSCFGIEYNAEELSEAILNLLQK 301
           VY+ K EEE +DYL+D S  MYL+SP++  +  +G  ++ + L++ ++  +++
Sbjct: 279 VYYMKTEEEDSDYLVDHSIVMYLMSPEMNFVKFYGKNHDVDSLTDGVVKEIRQ 331

The following BLAST results are available for this feature:

BLAST of CaUC01G018260 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6604025.1	2.1e-123	77.08	Protein SCO1-like 2, mitochondrial, partial [Cucurbita argyrosperma subsp. soror...	[more]
XP_023544547.1	6.0e-123	76.74	protein SCO1 homolog 2, mitochondrial isoform X1 [Cucurbita pepo subsp. pepo] >X...	[more]
XP_008440607.1	6.0e-123	75.91	PREDICTED: protein SCO1 homolog 2, mitochondrial [Cucumis melo]	[more]
XP_022949607.1	1.3e-122	76.41	protein SCO1 homolog 2, mitochondrial isoform X1 [Cucurbita moschata]	[more]
XP_022978543.1	2.3e-122	76.41	protein SCO1 homolog 2, mitochondrial isoform X1 [Cucurbita maxima]	[more]

BLAST of CaUC01G018260 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LAL0	4.7e-78	51.03	Protein SCO1 homolog 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=HCC2 PE...	[more]
Q8VYP0	1.0e-37	41.04	Protein SCO1 homolog 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=HCC1 PE...	[more]
O42899	5.0e-32	39.24	Protein sco1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN...	[more]
A1A4J8	1.3e-27	37.58	Protein SCO1 homolog, mitochondrial OS=Bos taurus OX=9913 GN=SCO1 PE=2 SV=1	[more]
Q5SUC9	1.3e-27	36.94	Protein SCO1 homolog, mitochondrial OS=Mus musculus OX=10090 GN=Sco1 PE=1 SV=1	[more]

BLAST of CaUC01G018260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B131	2.9e-123	75.91	protein SCO1 homolog 2, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103484980 PE...	[more]
A0A6J1GCL0	6.4e-123	76.41	protein SCO1 homolog 2, mitochondrial isoform X1 OS=Cucurbita moschata OX=3662 G...	[more]
A0A6J1ITF2	1.1e-122	76.41	protein SCO1 homolog 2, mitochondrial isoform X1 OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A0A0KIW8	5.1e-120	75.25	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G500510 PE=3 SV=1	[more]
A0A6J1BW99	3.7e-110	69.41	protein SCO1 homolog 2, mitochondrial OS=Momordica charantia OX=3673 GN=LOC11100...	[more]

BLAST of CaUC01G018260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G39740.1	3.3e-79	51.03	Thioredoxin superfamily protein	[more]
AT3G08950.1	7.5e-39	41.04	electron transport SCO1/SenC family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003782	Copper chaperone SCO1/SenC	PFAM	PF02630	SCO1-SenC	coord: 143..275 e-value: 6.5E-41 score: 139.4
IPR003782	Copper chaperone SCO1/SenC	PANTHER	PTHR12151	ELECTRON TRANSPORT PROTIN SCO1/SENC FAMILY MEMBER	coord: 1..300
IPR003782	Copper chaperone SCO1/SenC	CDD	cd02968	SCO	coord: 142..282 e-value: 1.76385E-56 score: 177.025
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 129..301 e-value: 4.3E-46 score: 158.7
None	No IPR available	PANTHER	PTHR12151:SF1	PROTEIN SCO1 HOMOLOG 2, MITOCHONDRIAL	coord: 1..300
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 140..299

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC01G018260.1	CaUC01G018260.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055070	copper ion homeostasis
biological_process	GO:0033617	mitochondrial cytochrome c oxidase assembly
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005739	mitochondrion