CaUC01G017890 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC01G017890
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	merozoite surface antigen 2-like
Location	Ciama_Chr01: 31324543 .. 31328678 (-)
RNA-Seq Expression	CaUC01G017890
Synteny	CaUC01G017890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAGTAAAACGCAAAGCTGAAGTGCAACGGAATCAACCACCTCGCTAAAACTCCCGCTAGATCCGCCAATTCCCCACCCAACCCTATCACCTGTTTAATTAAACTAATAAGGACTACTTCACAAAAAAATTTTGATTGCTTATGTTCGTGATTTAACATTACCTTCAAAATTGGAGATGCGAACAGGAATACAGGCAACAACAAAACGCAGCAAATGAAGAGAACCATCCATGAGCGCTGCAAATAAACTCCCAGCATGTAGTGTTTCTTCGCCCCATACGCCTGCCCACATAATGTCTCCAATGCGCTAGCCATTCCCATCTCAATTAACCCCCAAAAAGACATTGAAAAAAAACAGAGCTTCACTAAACATGGGGAAGAAACGAAGCAAAACAGAGAGTGTTGAATATTGGTAGTTGGTACCATAAGTCCCAAGTCAAAGCCGATGATGACATTAAGGGCGATTGAAATGGCGGCAAGGTCAAGATCACCCAAGTGGCCGGCGAAAGCTTGGGAAGTTACCATGACGGAATGAGTGCTTACTCTGCTTAAAATTGCAGGGGCGACGATATGCCATAGCTTCTTCGATTCAATCCAGACTCGTCTTACAAAATCCTCTTCTCTGTCAGGCAGATGTAATATTGGAGGTGAATCTTCCAATAAGGGGGCACTTATTTGCTGATCATTTGCCATGATTGTAAAATTTACAAGTTTTTTGTTCGGGATATTTGGAGCGGAACTTATTATTGTGTAGAGAAAAACAAAATAACATTGTTAGTGTCACCGTTTATTAAAGCACAACCCTGCAAAGAGAGAGACTTTTTTGTTTTTTGTTTTTTGTTTTAACTATAAGAAAATGCTTGGGTGCATCCATCGCAAGATGCTGTCCAAATTCCAGAAAGTTCTCTTTTCCTTTGAAAGTTGTAACGGGTACCTATTCTTTAATAAAATACATCAGCTTATATATTGGTTTTGCAAATTTAGAAATTTGAAAAGTTGTAATTTTTAATTTGTATCTTACTATTATTCGAAAAAGCTATCACATTTGGAGTCTACCACTAAAAGTCTATTCGTGATAGTTTGTAAACCAAAAGAAGCCTATCGCAAACAATTTTTTTCGTCACCATAGCACTTACAAATTTCGAAAAAACAATCCTATTCGTGATTATAGTTTGCATACAGTAAACTTTGACAAATGTATAATTTTAACCAACAATATTTAATGTTAATAGAATTCAATATAAATTGAATAAAAACAATAAAATCAAACATCAATGATAGAAGCCTACCAATGAAATTTTTCTATTATTAGTAGACTTCAATTATTGATTGTGCGTTTTATTTCAGGGATCGGTGAAGTTTTTAGACTTCTTACATAAACTGCATTTGTTAATTATCAAGCTCTTGAAACTGTTATGAAGCTGTTTTAGGCTGTGATTGAAGTTTTTGTTGATTCTCTCAACGATTTGCATCAATGTCATTCGAAACAAGGCTTCCTATTGATCATGTCTTAGTTCCTCACTGAATTATGTTTCACTTGTGTGTCTTCTTTCTCGGTTGTACTGTAAAAATCGAAATTGTTCCTCAATACAATTGAAGAAAATACCGAAAGATTTGAACTCCGAATATCAAGTTGATGAGTGTAAACATTTTCCTGACAAATATAAGCTAATGGATGTACGAAAATTGAAAATTCTTATTCATCTCTAATCCGATATACAAAGAATTCATTTCCAAAACAATAAAAAGGGGGAAAATATGATCAACAGAAGAACGAATCCTCAAAATAATGATGACTATCAAAATTACAATAACAACGATTAAAATAATAATAATAATAACGATCAAATTTTGTAGAGGCAGTATGGGTGAGGGATTAAAAAAGCAAAAGAATTCTACCAGTCATCACTCCCGTCCACCTTCGAATCTAGATCTCTTAATTGACCCAAGGATCAATGTCTACGCTAAAATCACTGCGAACAGAGTTCCAGCAACAGCGATTCCGAATGTCGCCGCTCCACCGATGTGTGACGCTGCTCCAGCTGGGTTGTCGGCCGCCGGTGCTTGGGGTGCAGGTGAAGGCACCTCGATTCCGGTGGGTGAAGGAGGAGAAGCAATGGGTGGAACTACAGGACCACCGGTGGGAGATCCCGAAGGAGTAGGACTGGAGCTTGGAGCTGGGGTAGGAGCAGTAGTTGCCGGAGCAGGGGCAGGAGCTGCTGGGGCCGGTGACGGAGCTCCAGGAGCGGGTGAGGGCGACGCGGGAGCCGGTGAAGGCGATGGTGCTCTGTTCGGCGTCGGAGTCGGAGATGGAGGGAGAGCCACCGGAGAAGGCGCCGGAGTGGCTGGTGGCGGAGTTAGAGGCTGTGAAGAACCCGGTGCCGGCGCTGGAGCCTGAGCCATACATAACCTCGTCAACAAAGCAAAAATCACAACGAATCGAACCCCCGAGAATCCCATCGTCTTTACCGGAAACAAAAAGGAAAAAAGATTTCTTATCAAAACAGAGTATCTCAGAGAAAGATAGTGGAAGTGGAAGCCAAACGACAGCGTTTTTCAAATTCTCTCACAAAGCTCCCTTTGTTTGTTTTGTTTTGTACCCCAATAGCCGGTGGTAAGTCCATATATATAGCCTCTCTCCCAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAGAACTTCTAGAGGAATCAGATACAGGTGGACCGAGTCAGCAAGCTACCCAGATACGAACACGTGTACGCGTTGAATTTTCTTCCCAATGAGCAGTCTGCAACCGTTGGATCCACCACGCGTCAGTTGGAGGAATGTCGGTGGGACATTACTTTCTTGTTCCTTTCCGTATGCTAG

mRNA sequence

ATGGAAATTGGTACCATAAGTCCCAAGTCAAAGCCGATGATGACATTAAGGGCGATTGAAATGGCGGCAAGGTCAAGATCACCCAAGTGGCCGGCGAAAGCTTGGGAAGGGCGACGATATGCCATAGCTTCTTCGATTCAATCCAGACTCGTCTTACAAAATCCTCTTCTCTGTCAGGCAGATGTAATATTGGAGAAAATGCTTGGGTGCATCCATCGCAAGATGCTGTCCAAATTCCAGAAAGTTCTCTTTTCCTTTGAAAGTTGTAACGGAGGCAGTATGGGTGAGGGATTAAAAAAGCAAAAGAATTCTACCAGTCATCACTCCCGTCCACCTTCGAATCTAGATCTCTTAATTGACCCAAGGATCAATGTCTACGCTAAAATCACTGCGAACAGAGTTCCAGCAACAGCGATTCCGAATGTCGCCGCTCCACCGATGTGTGACGCTGCTCCAGCTGGGTTGTCGGCCGCCGGTGCTTGGGGTGCAGGTGAAGGCACCTCGATTCCGGTGGGTGAAGGAGGAGAAGCAATGGGTGGAACTACAGGACCACCGGTGGGAGATCCCGAAGGAGTAGGACTGGAGCTTGGAGCTGGGTTGCCGGAGCAGGGGCAGGAGCTGCTGGGGCCGGTGACGGAGCTCCAGGAGCGGGTGAGGGCGACGCGGGAGCCGGTGAAGGCGATGGTGCTCTGTTCGGCGTCGGAGTCGGAGATGGAGGGAGAGCCACCGGAGAAGGCGCCGGAGTGGCTGGTGGCGGAGTTAGAGGCTGTGAAGAACCCGGTGCCGGCGCTGGAGCCTGAGCCATACATAACCTCGTCAACAAAGCAAAAATCACAACGAATCGAACCCCCGAGAATCCCATCGTCTTTACCGGAAACAAAAAGGAAAAAAGATTTCTTATCAAAACAGAGTATCTCAGAGAAAGATAGTGGAAGTGGAAGCCAAACGACAGCGTTTTTCAAATTCTCTCACAAAGCTCCCTTTATACAGGTGGACCGAGTCAGCAAGCTACCCAGATACGAACACGTGTACGCGTTGAATTTTCTTCCCAATGAGCAGTCTGCAACCGTTGGATCCACCACGCGTCAGTTGGAGGAATGTCGGTGGGACATTACTTTCTTGTTCCTTTCCGTATGCTAG

Coding sequence (CDS)

ATGGAAATTGGTACCATAAGTCCCAAGTCAAAGCCGATGATGACATTAAGGGCGATTGAAATGGCGGCAAGGTCAAGATCACCCAAGTGGCCGGCGAAAGCTTGGGAAGGGCGACGATATGCCATAGCTTCTTCGATTCAATCCAGACTCGTCTTACAAAATCCTCTTCTCTGTCAGGCAGATGTAATATTGGAGAAAATGCTTGGGTGCATCCATCGCAAGATGCTGTCCAAATTCCAGAAAGTTCTCTTTTCCTTTGAAAGTTGTAACGGAGGCAGTATGGGTGAGGGATTAAAAAAGCAAAAGAATTCTACCAGTCATCACTCCCGTCCACCTTCGAATCTAGATCTCTTAATTGACCCAAGGATCAATGTCTACGCTAAAATCACTGCGAACAGAGTTCCAGCAACAGCGATTCCGAATGTCGCCGCTCCACCGATGTGTGACGCTGCTCCAGCTGGGTTGTCGGCCGCCGGTGCTTGGGGTGCAGGTGAAGGCACCTCGATTCCGGTGGGTGAAGGAGGAGAAGCAATGGGTGGAACTACAGGACCACCGGTGGGAGATCCCGAAGGAGTAGGACTGGAGCTTGGAGCTGGGTTGCCGGAGCAGGGGCAGGAGCTGCTGGGGCCGGTGACGGAGCTCCAGGAGCGGGTGAGGGCGACGCGGGAGCCGGTGAAGGCGATGGTGCTCTGTTCGGCGTCGGAGTCGGAGATGGAGGGAGAGCCACCGGAGAAGGCGCCGGAGTGGCTGGTGGCGGAGTTAGAGGCTGTGAAGAACCCGGTGCCGGCGCTGGAGCCTGAGCCATACATAACCTCGTCAACAAAGCAAAAATCACAACGAATCGAACCCCCGAGAATCCCATCGTCTTTACCGGAAACAAAAAGGAAAAAAGATTTCTTATCAAAACAGAGTATCTCAGAGAAAGATAGTGGAAGTGGAAGCCAAACGACAGCGTTTTTCAAATTCTCTCACAAAGCTCCCTTTATACAGGTGGACCGAGTCAGCAAGCTACCCAGATACGAACACGTGTACGCGTTGAATTTTCTTCCCAATGAGCAGTCTGCAACCGTTGGATCCACCACGCGTCAGTTGGAGGAATGTCGGTGGGACATTACTTTCTTGTTCCTTTCCGTATGCTAG

Protein sequence

MEIGTISPKSKPMMTLRAIEMAARSRSPKWPAKAWEGRRYAIASSIQSRLVLQNPLLCQADVILEKMLGCIHRKMLSKFQKVLFSFESCNGGSMGEGLKKQKNSTSHHSRPPSNLDLLIDPRINVYAKITANRVPATAIPNVAAPPMCDAAPAGLSAAGAWGAGEGTSIPVGEGGEAMGGTTGPPVGDPEGVGLELGAGLPEQGQELLGPVTELQERVRATREPVKAMVLCSASESEMEGEPPEKAPEWLVAELEAVKNPVPALEPEPYITSSTKQKSQRIEPPRIPSSLPETKRKKDFLSKQSISEKDSGSGSQTTAFFKFSHKAPFIQVDRVSKLPRYEHVYALNFLPNEQSATVGSTTRQLEECRWDITFLFLSVC

Homology

[Close]

BLAST of CaUC01G017890 vs. NCBI nr
Match: XP_022132682.1 (merozoite surface antigen 2-like [Momordica charantia])

HSP 1 Score: 92.4 bits (228), Expect = 8.8e-15
Identity = 52/80 (65.00%), Postives = 58/80 (72.50%), Query Frame = 0


Query: 123 INVYAKITANRVPATAIPNVAAPPMCDAAPAGLSAAGAWGAGEGTS--IPVGEGGEAMGG 182
           + +YA  TANRVPA AIPNVAA P+CDAAPAGLSA G WGAGEGT    P GEGGE   G
Sbjct: 3   VEIYANTTANRVPARAIPNVAARPICDAAPAGLSAGGGWGAGEGTGTPFPAGEGGEGKAG 62

Query: 183 TTGPPVGDPEGVGLELGAGL 201
            TG P GDP G G+ +G G+
Sbjct: 63  -TGAPAGDPLGEGIGVGVGV 81

[Close]

BLAST of CaUC01G017890 vs. NCBI nr
Match: XP_011658485.2 (jacalin-related lectin 34-like [Cucumis sativus] >KAE8647550.1 hypothetical protein Csa_004127 [Cucumis sativus])

HSP 1 Score: 80.1 bits (196), Expect = 4.5e-11
Identity = 43/54 (79.63%), Postives = 46/54 (85.19%), Query Frame = 0


Query: 147 MCDAAPAGLSAAGAWGAGEGTSIPVGEGGEAMGGTTGPPVGDPEGVGLELGAGL 201
           MCD APAGLSAAG WGAGEGTSIPVGEGGEAMGG TGP    PEGVG+E+G G+
Sbjct: 1   MCDPAPAGLSAAGPWGAGEGTSIPVGEGGEAMGGRTGP----PEGVGVEIGVGV 50

[Close]

BLAST of CaUC01G017890 vs. NCBI nr
Match: KAG7034220.1 (hypothetical protein SDJN02_03947, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 77.0 bits (188), Expect = 3.8e-10
Identity = 42/54 (77.78%), Postives = 47/54 (87.04%), Query Frame = 0


Query: 147 MCDAAPAGLSAAGAWGAGEGTSIPVGEGGEAMGGTTGPPVGDPEGVGLELGAGL 201
           MCDAAPAGLSAAGA G GEG S+ +GEGGEA+GGTTG P GDPEG+G ELGAG+
Sbjct: 1   MCDAAPAGLSAAGASGIGEGPSV-LGEGGEAIGGTTGAPAGDPEGIGRELGAGV 53

[Close]

BLAST of CaUC01G017890 vs. NCBI nr
Match: KAG7026860.1 (hypothetical protein SDJN02_10867, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 68.9 bits (167), Expect = 1.0e-07
Identity = 43/67 (64.18%), Postives = 47/67 (70.15%), Query Frame = 0


Query: 134 VPATAIPNVAAPPMCDAAPAGLSAAGAWGAGEGTSIPVGEGGEAMGGTTGPPVGDPEGVG 193
           +PATAIPNV APP+CDAAP GLSA G  GA         EGGEA  GTTGPP GDPEGV 
Sbjct: 39  LPATAIPNVPAPPICDAAPVGLSAGGPSGA--------DEGGEATRGTTGPPAGDPEGV- 94

Query: 194 LELGAGL 201
             +GAG+
Sbjct: 99  --IGAGV 94

[Close]

BLAST of CaUC01G017890 vs. ExPASy TrEMBL
Match: A0A6J1BUI4 (merozoite surface antigen 2-like OS=Momordica charantia OX=3673 GN=LOC111005482 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 4.3e-15
Identity = 52/80 (65.00%), Postives = 58/80 (72.50%), Query Frame = 0


Query: 123 INVYAKITANRVPATAIPNVAAPPMCDAAPAGLSAAGAWGAGEGTS--IPVGEGGEAMGG 182
           + +YA  TANRVPA AIPNVAA P+CDAAPAGLSA G WGAGEGT    P GEGGE   G
Sbjct: 3   VEIYANTTANRVPARAIPNVAARPICDAAPAGLSAGGGWGAGEGTGTPFPAGEGGEGKAG 62

Query: 183 TTGPPVGDPEGVGLELGAGL 201
            TG P GDP G G+ +G G+
Sbjct: 63  -TGAPAGDPLGEGIGVGVGV 81

The following BLAST results are available for this feature:

BLAST of CaUC01G017890 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022132682.1	8.8e-15	65.00	merozoite surface antigen 2-like [Momordica charantia]	[more]
XP_011658485.2	4.5e-11	79.63	jacalin-related lectin 34-like [Cucumis sativus] >KAE8647550.1 hypothetical prot...	[more]
KAG7034220.1	3.8e-10	77.78	hypothetical protein SDJN02_03947, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG7026860.1	1.0e-07	64.18	hypothetical protein SDJN02_10867, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of CaUC01G017890 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CaUC01G017890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BUI4	4.3e-15	65.00	merozoite surface antigen 2-like OS=Momordica charantia OX=3673 GN=LOC111005482 ...	[more]

BLAST of CaUC01G017890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 289..304
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 269..283
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 265..314

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC01G017890.1	CaUC01G017890.1	mRNA