CaUC01G006850 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTAATTGGAATTCAACCATATGGTAGTCTAAAGCCAAAGAGAATAAACATTCGTTTATGGATTTTGATTAGTGGCAACCTTAATACATCAGATGTTTTGCAGAAGAAATTGCCATCTAATTGCATTATGCCGTCTATTTGCCCTTCATGTCTAAAGAATGAGGATAATCTTGATTATGTTTTCTTTGATTGCTCTTATGCCAATCTGATGTCAAATGTTGGCAGCCCAGTGGGTCTTCTCCAATATCTTCAGAAGCATACTTTCAATTTCTTTATGGCTCTCTCATTAATTCCAAAACGAAGTTGCTTTGGAATAATGGAGTTATAG ATGGTAATTGGAATTCAACCATATGGTAGTCTAAAGCCAAAGAGAATAAACATTCGTTTATGGATTTTGATTAGTGGCAACCTTAATACATCAGATGTTTTGCAGAAGAAATTGCCATCTAATTGCATTATGCCGTCTATTTGCCCTTCATGTCTAAAGAATGAGGATAATCTTGATTATGTTTTCTTTGATTGCTCTTATGCCAATCTGATGTCAAATGTTGGCAGCCCAGTGGGTCTTCTCCAATATCTTCAGAAGCATACTTTCAATTTCTTTATGGCTCTCTCATTAATTCCAAAACGAAGTTGCTTTGGAATAATGGAGTTATAG ATGGTAATTGGAATTCAACCATATGGTAGTCTAAAGCCAAAGAGAATAAACATTCGTTTATGGATTTTGATTAGTGGCAACCTTAATACATCAGATGTTTTGCAGAAGAAATTGCCATCTAATTGCATTATGCCGTCTATTTGCCCTTCATGTCTAAAGAATGAGGATAATCTTGATTATGTTTTCTTTGATTGCTCTTATGCCAATCTGATGTCAAATGTTGGCAGCCCAGTGGGTCTTCTCCAATATCTTCAGAAGCATACTTTCAATTTCTTTATGGCTCTCTCATTAATTCCAAAACGAAGTTGCTTTGGAATAATGGAGTTATAG MVIGIQPYGSLKPKRINIRLWILISGNLNTSDVLQKKLPSNCIMPSICPSCLKNEDNLDYVFFDCSYANLMSNVGSPVGLLQYLQKHTFNFFMALSLIPKRSCFGIMEL Homology
BLAST of CaUC01G006850 vs. NCBI nr
Match: XP_022153214.1 (uncharacterized protein LOC111020765 [Momordica charantia]) HSP 1 Score: 68.6 bits (166), Expect = 3.9e-08 Identity = 27/62 (43.55%), Postives = 44/62 (70.97%), Query Frame = 0
BLAST of CaUC01G006850 vs. NCBI nr
Match: XP_038903695.1 (uncharacterized protein LOC120090219 [Benincasa hispida]) HSP 1 Score: 63.2 bits (152), Expect = 1.6e-06 Identity = 24/57 (42.11%), Postives = 41/57 (71.93%), Query Frame = 0
BLAST of CaUC01G006850 vs. NCBI nr
Match: TYK21876.1 (hypothetical protein E5676_scaffold494G00090 [Cucumis melo var. makuwa]) HSP 1 Score: 60.8 bits (146), Expect = 8.2e-06 Identity = 27/53 (50.94%), Postives = 38/53 (71.70%), Query Frame = 0
BLAST of CaUC01G006850 vs. NCBI nr
Match: VVA31005.1 (Hypothetical predicted protein, partial [Prunus dulcis]) HSP 1 Score: 60.5 bits (145), Expect = 1.1e-05 Identity = 22/56 (39.29%), Postives = 37/56 (66.07%), Query Frame = 0
BLAST of CaUC01G006850 vs. NCBI nr
Match: BBN69274.1 (TatD related DNase [Prunus dulcis]) HSP 1 Score: 60.1 bits (144), Expect = 1.4e-05 Identity = 24/66 (36.36%), Postives = 40/66 (60.61%), Query Frame = 0
BLAST of CaUC01G006850 vs. ExPASy TrEMBL
Match: A0A6J1DIE2 (uncharacterized protein LOC111020765 OS=Momordica charantia OX=3673 GN=LOC111020765 PE=4 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 1.9e-08 Identity = 27/62 (43.55%), Postives = 44/62 (70.97%), Query Frame = 0
BLAST of CaUC01G006850 vs. ExPASy TrEMBL
Match: A0A5D3DE60 (zf-RVT domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold494G00090 PE=4 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 4.0e-06 Identity = 27/53 (50.94%), Postives = 38/53 (71.70%), Query Frame = 0
BLAST of CaUC01G006850 vs. ExPASy TrEMBL
Match: A0A5E4FU23 (zf-RVT domain-containing protein (Fragment) OS=Prunus dulcis OX=3755 GN=ALMOND_2B035086 PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 5.2e-06 Identity = 22/56 (39.29%), Postives = 37/56 (66.07%), Query Frame = 0
BLAST of CaUC01G006850 vs. ExPASy TrEMBL
Match: A0A5H2XQW2 (TatD related DNase OS=Prunus dulcis OX=3755 GN=Prudu_862S001100 PE=4 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 6.7e-06 Identity = 24/66 (36.36%), Postives = 40/66 (60.61%), Query Frame = 0
BLAST of CaUC01G006850 vs. ExPASy TrEMBL
Match: M5W794 (Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa016462mg PE=4 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 6.7e-06 Identity = 21/56 (37.50%), Postives = 37/56 (66.07%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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