CSPI07G22830 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCAAAAAATAAGCAAAAGCAAAGAACAAAATCCGCTTTCTCCCATCCCCGCGGGAGCCGCACCCGCTCTCTCAATACCTTCCATCCTCAACAACAACAAACACTACTCCTTAACCCCTCAAATGAGCCCCATCACTCACCACCACCACCACCACCACCACCTTTCCAAATCCTCCACCGCCCCCGTCACAACCACCACTTCTTCCTCCACTACCCAAGCCTGCGCCGCTTGTAAATACCAACGCCGTAAGTGCGCTCCCGATTGCATTCTTGCTCCTTATTTCCCTCACGATCGTCAACGTCAATTCTTAAACGCTCATAAACTCTTCGGTGTTAGCAATATTACTAAAATTATCAAGAATCTTGATCCCTTTGAGAAGGAAGAAGCAATGCGTACCATTATTTTTCAATCTGATGTCCGATCCGTTGATCCTGTTGGCGGTTGTTATCGGATTATTCGAGATCTTCAACGTCAAATTGAATATAATAAGGCCGAGCTTGAGATTGTGCTTCATCAATTGGCGATTTGTAAGCAACAGGCCGCTGCTGCCGCGGCTGCTGCTGCTGCCGCCGCGATTCTTGAAGGGGATCCGATGAGTGGATATGGCGGGATTGAGCATCAGTTTGTGGAAGGATATGAAGGCGAAGGGTTTATGGTTGGGGAAAATGAGAACGGAGAGAGTTTGGAAGATCAGGAAGTGGAGGTTTGGGGAATTCAAGATTCCTGTTCTTCATTGCAATTGAAACAAGCTGGCTCTGTTCATGATTTTCATGATATCAAAATCCACGATAATAATCATCATCAACATCATCATCAACAACAACTTCTTAAATTTCAAATCGATCATCATCAAGATTTGGTTCATCAAAGGTCAGTTTCATTTCTTGCATGGCACTAATTTTACAATTTTTTTTTATCCCTAAATATTTTTATTTTTCTCTTTATTTCAAATTGTTTGTGTGATAAAAATTTGATTATTAAATTAAATTGCAATTTCTAAATAAATTTTCTCCATCTATATTTATTATTTATTAATTCTCCAAGCATTTTGAATTTTTATGATTGGTTAATTTGGCGCCAAATGACGTAATACCGAACTCTTAACTTACAAGCTTGGCCCATAATCCAATAAAGCCCTTGATTTTCTTTATGGGCCAGGCCATTCATTTGCCTTGATCAAGCCTAATGGCCAAGGAACCCAGGGACAATTTCTGAGAGGCAACCTATAATTTTTTTCTTTTTTTTTTTTTTTTTGCTAAATTGAAAAAACTATCCCAAAACTTTGCTGTTTGTTGAAAAAGTGTCCCTATTGTTTTAAAAAGATGTAATCTTTTAAGCTTTCATAAATGTTTCAAAACTAATTGAGACGAGTAGTGTGACATGTCCTAAGTTCTAATTCTAATTTTTCGGGCTGAAATGAATTGATGACAAAATTGGAGTGAAGGTAAAATCTAAAGTGTTTTGACTCATTTGAACTGTGTGCAGTGAAGAACCAATGCTGAAGATGGACAATATGATATTGAAAGAAGATTCTGACCCAATACAACAGGTTCAAGATCAAGAACTTAAAGGTGCAGTAGACACTTTATTTACCTTCCCATCTTGTGATACTTAGCTTCAGCACAGCCCTTTCTCCTTCATCACTTTAGTTTTCTTTGATTAATTAGTCCATAAATGCCTTTGGAGAAGAAAAGGTGTGAGTCATTTATAAAAGAGAATGAGGTAAGGTATGAATAATTTGCGCCCTTCTCCAACGTTCACTCCATGTACTTAGGTATATCATATCTATATACCAATTCATTAACTTTTCATACTTCACAGGAATTAAACATTTGTTTATTCACCTTGTCTTGTGAATACATAAAGCGTTTTGAACATAGAATTGCTTTGAATATGGAACAAACTAAATGACCGTAAATGGCCATTACGGCTGATCCAATCTCCTTTTCATAACTGCTTCTTG CCAAAAAATAAGCAAAAGCAAAGAACAAAATCCGCTTTCTCCCATCCCCGCGGGAGCCGCACCCGCTCTCTCAATACCTTCCATCCTCAACAACAACAAACACTACTCCTTAACCCCTCAAATGAGCCCCATCACTCACCACCACCACCACCACCACCACCTTTCCAAATCCTCCACCGCCCCCGTCACAACCACCACTTCTTCCTCCACTACCCAAGCCTGCGCCGCTTGTAAATACCAACGCCGTAAGTGCGCTCCCGATTGCATTCTTGCTCCTTATTTCCCTCACGATCGTCAACGTCAATTCTTAAACGCTCATAAACTCTTCGGTGTTAGCAATATTACTAAAATTATCAAGAATCTTGATCCCTTTGAGAAGGAAGAAGCAATGCGTACCATTATTTTTCAATCTGATGTCCGATCCGTTGATCCTGTTGGCGGTTGTTATCGGATTATTCGAGATCTTCAACGTCAAATTGAATATAATAAGGCCGAGCTTGAGATTGTGCTTCATCAATTGGCGATTTGTAAGCAACAGGCCGCTGCTGCCGCGGCTGCTGCTGCTGCCGCCGCGATTCTTGAAGGGGATCCGATGAGTGGATATGGCGGGATTGAGCATCAGTTTGTGGAAGGATATGAAGGCGAAGGGTTTATGGTTGGGGAAAATGAGAACGGAGAGAGTTTGGAAGATCAGGAAGTGGAGGTTTGGGGAATTCAAGATTCCTGTTCTTCATTGCAATTGAAACAAGCTGGCTCTGTTCATGATTTTCATGATATCAAAATCCACGATAATAATCATCATCAACATCATCATCAACAACAACTTCTTAAATTTCAAATCGATCATCATCAAGATTTGGTTCATCAAAGTGAAGAACCAATGCTGAAGATGGACAATATGATATTGAAAGAAGATTCTGACCCAATACAACAGGTTCAAGATCAAGAACTTAAAGGTGCAGTAGACACTTTATTTACCTTCCCATCTTGTGATACTTAGCTTCAGCACAGCCCTTTCTCCTTCATCACTTTAGTTTTCTTTGATTAATTAGTCCATAAATGCCTTTGGAGAAGAAAAGGTGTGAGTCATTTATAAAAGAGAATGAGGTAAGGTATGAATAATTTGCGCCCTTCTCCAACGTTCACTCCATGTACTTAGGTATATCATATCTATATACCAATTCATTAACTTTTCATACTTCACAGGAATTAAACATTTGTTTATTCACCTTGTCTTGTGAATACATAAAGCGTTTTGAACATAGAATTGCTTTGAATATGGAACAAACTAAATGACCGTAAATGGCCATTACGGCTGATCCAATCTCCTTTTCATAACTGCTTCTTG ATGAGCCCCATCACTCACCACCACCACCACCACCACCACCTTTCCAAATCCTCCACCGCCCCCGTCACAACCACCACTTCTTCCTCCACTACCCAAGCCTGCGCCGCTTGTAAATACCAACGCCGTAAGTGCGCTCCCGATTGCATTCTTGCTCCTTATTTCCCTCACGATCGTCAACGTCAATTCTTAAACGCTCATAAACTCTTCGGTGTTAGCAATATTACTAAAATTATCAAGAATCTTGATCCCTTTGAGAAGGAAGAAGCAATGCGTACCATTATTTTTCAATCTGATGTCCGATCCGTTGATCCTGTTGGCGGTTGTTATCGGATTATTCGAGATCTTCAACGTCAAATTGAATATAATAAGGCCGAGCTTGAGATTGTGCTTCATCAATTGGCGATTTGTAAGCAACAGGCCGCTGCTGCCGCGGCTGCTGCTGCTGCCGCCGCGATTCTTGAAGGGGATCCGATGAGTGGATATGGCGGGATTGAGCATCAGTTTGTGGAAGGATATGAAGGCGAAGGGTTTATGGTTGGGGAAAATGAGAACGGAGAGAGTTTGGAAGATCAGGAAGTGGAGGTTTGGGGAATTCAAGATTCCTGTTCTTCATTGCAATTGAAACAAGCTGGCTCTGTTCATGATTTTCATGATATCAAAATCCACGATAATAATCATCATCAACATCATCATCAACAACAACTTCTTAAATTTCAAATCGATCATCATCAAGATTTGGTTCATCAAAGTGAAGAACCAATGCTGAAGATGGACAATATGATATTGAAAGAAGATTCTGACCCAATACAACAGGTTCAAGATCAAGAACTTAAAGGTGCAGTAGACACTTTATTTACCTTCCCATCTTGTGATACTTAG MSPITHHHHHHHHLSKSSTAPVTTTTSSSTTQACAACKYQRRKCAPDCILAPYFPHDRQRQFLNAHKLFGVSNITKIIKNLDPFEKEEAMRTIIFQSDVRSVDPVGGCYRIIRDLQRQIEYNKAELEIVLHQLAICKQQAAAAAAAAAAAAILEGDPMSGYGGIEHQFVEGYEGEGFMVGENENGESLEDQEVEVWGIQDSCSSLQLKQAGSVHDFHDIKIHDNNHHQHHHQQQLLKFQIDHHQDLVHQSEEPMLKMDNMILKEDSDPIQQVQDQELKGAVDTLFTFPSCDT* Homology
BLAST of CSPI07G22830 vs. ExPASy Swiss-Prot
Match: Q9LRW1 (LOB domain-containing protein 22 OS=Arabidopsis thaliana OX=3702 GN=LBD22 PE=2 SV=1) HSP 1 Score: 164.9 bits (416), Expect = 1.4e-39 Identity = 105/232 (45.26%), Postives = 140/232 (60.34%), Query Frame = 0
BLAST of CSPI07G22830 vs. ExPASy Swiss-Prot
Match: Q9SSM9 (LOB domain-containing protein 7 OS=Arabidopsis thaliana OX=3702 GN=LBD7 PE=2 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 7.3e-28 Identity = 58/117 (49.57%), Postives = 85/117 (72.65%), Query Frame = 0
BLAST of CSPI07G22830 vs. ExPASy Swiss-Prot
Match: A2WXT0 (LOB domain-containing protein 6 OS=Oryza sativa subsp. indica OX=39946 GN=LBD6 PE=3 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 8.9e-26 Identity = 57/142 (40.14%), Postives = 92/142 (64.79%), Query Frame = 0
BLAST of CSPI07G22830 vs. ExPASy Swiss-Prot
Match: Q8LQH4 (LOB domain-containing protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=LBD6 PE=2 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 8.9e-26 Identity = 57/142 (40.14%), Postives = 92/142 (64.79%), Query Frame = 0
BLAST of CSPI07G22830 vs. ExPASy Swiss-Prot
Match: Q9STS6 (LOB domain-containing protein 27 OS=Arabidopsis thaliana OX=3702 GN=LBD27 PE=1 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 4.4e-25 Identity = 59/118 (50.00%), Postives = 78/118 (66.10%), Query Frame = 0
BLAST of CSPI07G22830 vs. ExPASy TrEMBL
Match: A0A0A0K9M3 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G451300 PE=3 SV=1) HSP 1 Score: 562.4 bits (1448), Expect = 1.1e-156 Identity = 287/292 (98.29%), Postives = 289/292 (98.97%), Query Frame = 0
BLAST of CSPI07G22830 vs. ExPASy TrEMBL
Match: A0A6J1JXA6 (LOB domain-containing protein 29-like OS=Cucurbita maxima OX=3661 GN=LOC111488330 PE=3 SV=1) HSP 1 Score: 453.4 bits (1165), Expect = 7.4e-124 Identity = 246/301 (81.73%), Postives = 261/301 (86.71%), Query Frame = 0
BLAST of CSPI07G22830 vs. ExPASy TrEMBL
Match: A0A6J1GR11 (LOB domain-containing protein 29-like OS=Cucurbita moschata OX=3662 GN=LOC111456336 PE=3 SV=1) HSP 1 Score: 450.3 bits (1157), Expect = 6.2e-123 Identity = 245/306 (80.07%), Postives = 260/306 (84.97%), Query Frame = 0
BLAST of CSPI07G22830 vs. ExPASy TrEMBL
Match: A0A1S4E3M5 (LOB domain-containing protein 22 OS=Cucumis melo OX=3656 GN=LOC103500724 PE=3 SV=1) HSP 1 Score: 400.2 bits (1027), Expect = 7.4e-108 Identity = 210/215 (97.67%), Postives = 211/215 (98.14%), Query Frame = 0
BLAST of CSPI07G22830 vs. ExPASy TrEMBL
Match: A0A5D3BWM0 (LOB domain-containing protein 22 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G00920 PE=3 SV=1) HSP 1 Score: 354.4 bits (908), Expect = 4.7e-94 Identity = 191/204 (93.63%), Postives = 196/204 (96.08%), Query Frame = 0
BLAST of CSPI07G22830 vs. NCBI nr
Match: XP_011659803.2 (LOB domain-containing protein 22 [Cucumis sativus] >KGN45524.1 hypothetical protein Csa_015647 [Cucumis sativus]) HSP 1 Score: 562.4 bits (1448), Expect = 2.3e-156 Identity = 287/292 (98.29%), Postives = 289/292 (98.97%), Query Frame = 0
BLAST of CSPI07G22830 vs. NCBI nr
Match: XP_038899918.1 (LOB domain-containing protein 22 [Benincasa hispida]) HSP 1 Score: 507.3 bits (1305), Expect = 8.9e-140 Identity = 265/294 (90.14%), Postives = 277/294 (94.22%), Query Frame = 0
BLAST of CSPI07G22830 vs. NCBI nr
Match: XP_022991793.1 (LOB domain-containing protein 29-like [Cucurbita maxima]) HSP 1 Score: 453.4 bits (1165), Expect = 1.5e-123 Identity = 246/301 (81.73%), Postives = 261/301 (86.71%), Query Frame = 0
BLAST of CSPI07G22830 vs. NCBI nr
Match: XP_022953930.1 (LOB domain-containing protein 29-like [Cucurbita moschata]) HSP 1 Score: 450.3 bits (1157), Expect = 1.3e-122 Identity = 245/306 (80.07%), Postives = 260/306 (84.97%), Query Frame = 0
BLAST of CSPI07G22830 vs. NCBI nr
Match: KAG7014013.1 (LOB domain-containing protein 22, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 449.9 bits (1156), Expect = 1.7e-122 Identity = 245/307 (79.80%), Postives = 259/307 (84.36%), Query Frame = 0
BLAST of CSPI07G22830 vs. TAIR 10
Match: AT3G13850.1 (LOB domain-containing protein 22 ) HSP 1 Score: 164.9 bits (416), Expect = 1.0e-40 Identity = 105/232 (45.26%), Postives = 140/232 (60.34%), Query Frame = 0
BLAST of CSPI07G22830 vs. TAIR 10
Match: AT1G72980.1 (LOB domain-containing protein 7 ) HSP 1 Score: 125.9 bits (315), Expect = 5.2e-29 Identity = 58/117 (49.57%), Postives = 85/117 (72.65%), Query Frame = 0
BLAST of CSPI07G22830 vs. TAIR 10
Match: AT3G47870.1 (LOB domain-containing protein 27 ) HSP 1 Score: 116.7 bits (291), Expect = 3.1e-26 Identity = 59/118 (50.00%), Postives = 78/118 (66.10%), Query Frame = 0
BLAST of CSPI07G22830 vs. TAIR 10
Match: AT1G65620.1 (Lateral organ boundaries (LOB) domain family protein ) HSP 1 Score: 109.8 bits (273), Expect = 3.8e-24 Identity = 52/120 (43.33%), Postives = 79/120 (65.83%), Query Frame = 0
BLAST of CSPI07G22830 vs. TAIR 10
Match: AT1G65620.2 (Lateral organ boundaries (LOB) domain family protein ) HSP 1 Score: 109.8 bits (273), Expect = 3.8e-24 Identity = 52/120 (43.33%), Postives = 79/120 (65.83%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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