CSPI07G22460 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI07G22460
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr7: 19046465 .. 19046902 (+)
RNA-Seq ExpressionCSPI07G22460
SyntenyCSPI07G22460
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CACACACACTTTCCAAATTCCAAATGGCTGAGTCGTCTTACGAATTAGAGGCGGAAGATGAGGCCAAATCCCTCCTCCGCTCCGGCTACCGTCGTCCCTCACGGCGCTGGATCCTTCTACGGCGGAAGAAGCTTCCGACTGCCCGTCTCGGCGGAAGAAGGCCGCCAAGAACGGCGGCGATTTGGAGGTCAATTAAAGAAATTAAAATGAGAAAGTGGGCGATGACGATGACGAATAAGGTCCGATGCAAAGACATTGCCAGCTTCAATGCTTTTCTTAGAAAGATTCTATTGGAGATTTCTTTAGCTATTCCTCTTCTTGGCGTTTCCCTCTCTATTTAACTATATACCTCTTTTTTATGTAGTACTCATCATCTCCATCCATCCTTCCACTGAACTTGAAAGTACTGTTTGAATCTCTCTTTTTTTCTTATATAGC

mRNA sequence

CACACACACTTTCCAAATTCCAAATGGCTGAGTCGTCTTACGAATTAGAGGCGGAAGATGAGGCCAAATCCCTCCTCCGCTCCGGCTACCGTCGTCCCTCACGGCGCTGGATCCTTCTACGGCGGAAGAAGCTTCCGACTGCCCGTCTCGGCGGAAGAAGGCCGCCAAGAACGGCGGCGATTTGGAGGTCAATTAAAGAAATTAAAATGAGAAAGTGGGCGATGACGATGACGAATAAGGTCCGATGCAAAGACATTGCCAGCTTCAATGCTTTTCTTAGAAAGATTCTATTGGAGATTTCTTTAGCTATTCCTCTTCTTGGCGTTTCCCTCTCTATTTAACTATATACCTCTTTTTTATGTAGTACTCATCATCTCCATCCATCCTTCCACTGAACTTGAAAGTACTGTTTGAATCTCTCTTTTTTTCTTATATAGC

Coding sequence (CDS)

ATGGCTGAGTCGTCTTACGAATTAGAGGCGGAAGATGAGGCCAAATCCCTCCTCCGCTCCGGCTACCGTCGTCCCTCACGGCGCTGGATCCTTCTACGGCGGAAGAAGCTTCCGACTGCCCGTCTCGGCGGAAGAAGGCCGCCAAGAACGGCGGCGATTTGGAGGTCAATTAAAGAAATTAAAATGAGAAAGTGGGCGATGACGATGACGAATAAGGTCCGATGCAAAGACATTGCCAGCTTCAATGCTTTTCTTAGAAAGATTCTATTGGAGATTTCTTTAGCTATTCCTCTTCTTGGCGTTTCCCTCTCTATTTAA

Protein sequence

MAESSYELEAEDEAKSLLRSGYRRPSRRWILLRRKKLPTARLGGRRPPRTAAIWRSIKEIKMRKWAMTMTNKVRCKDIASFNAFLRKILLEISLAIPLLGVSLSI*
Homology
BLAST of CSPI07G22460 vs. ExPASy TrEMBL
Match: A0A0A0KCH4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G448920 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 3.1e-48
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0

Query: 1   MAESSYELEAEDEAKSLLRSGYRRPSRRWILLRRKKLPTARLGGRRPPRTAAIWRSIKEI 60
           MAESSYELEAEDEAKSLLRSGYRRPSRRWILLRRKKLPTARLGGRRPPRTAAIWRSIKEI
Sbjct: 1   MAESSYELEAEDEAKSLLRSGYRRPSRRWILLRRKKLPTARLGGRRPPRTAAIWRSIKEI 60

Query: 61  KMRKWAMTMTNKVRCKDIASFNAFLRKILLEISLAIPLLGVSLSI 106
           KMRKWAMTMTNKVRCKDIASFNAFLRKILLEISLAIPLLGVSLSI
Sbjct: 61  KMRKWAMTMTNKVRCKDIASFNAFLRKILLEISLAIPLLGVSLSI 105

BLAST of CSPI07G22460 vs. ExPASy TrEMBL
Match: A0A5A7UTZ4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G001310 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 7.4e-42
Identity = 93/101 (92.08%), Postives = 96/101 (95.05%), Query Frame = 0

Query: 5   SYELEAEDEAKSLLRSGYRRPSRRWILLRRKKLPTARLGGRRPPRTAAIWRSIKEIKMRK 64
           SY+LEA+DEAKSLLRSGYRRPSRRWILLRRKKLPTARLGGRRPPRT AIWRSIKEIKMRK
Sbjct: 4   SYKLEAQDEAKSLLRSGYRRPSRRWILLRRKKLPTARLGGRRPPRTVAIWRSIKEIKMRK 63

Query: 65  WAMTMTNKVRCKDIASFNAFLRKILLEISLAIPLLGVSLSI 106
           WA  MT KVRCKDIA FNAFL+KILLEISLAIPLLGVSLSI
Sbjct: 64  WAAMMTMKVRCKDIAGFNAFLKKILLEISLAIPLLGVSLSI 104

BLAST of CSPI07G22460 vs. ExPASy TrEMBL
Match: A0A6J1GVZ8 (uncharacterized protein LOC111458050 OS=Cucurbita moschata OX=3662 GN=LOC111458050 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 6.6e-06
Identity = 46/113 (40.71%), Postives = 66/113 (58.41%), Query Frame = 0

Query: 6   YELEAEDEAKSLLRSGYRRPSRRWILLRRKKLPTARLGGRRPPRTAAIWRSIKEIKMRKW 65
           YE E E +  + LR G RR +RR +  RR+++P ARLGG+R  R  A  R +++I++R W
Sbjct: 5   YEPE-EGQPGAGLRRGTRRGTRRGMRFRRRRMPVARLGGKRSGRLVAWGRMLRKIRLR-W 64

Query: 66  ----AMTMTNKVR------CKDIASFNAFLR----KILLEISLAIPLLGVSLS 105
                + M  K++       KDI    A+ R    ++LLE S AIP+LGVSLS
Sbjct: 65  VKLKCIAMVKKMKEYYTRLMKDIIEAGAYARSYQHRLLLETSFAIPILGVSLS 115

BLAST of CSPI07G22460 vs. ExPASy TrEMBL
Match: A0A2P5EDF5 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_206290 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 5.6e-05
Identity = 36/96 (37.50%), Postives = 56/96 (58.33%), Query Frame = 0

Query: 23  RRPSRRWILLRRKKLPTARLGGRRPPRTAAIWRSIKEIKMRKWA----MTMTNKVR---- 82
           RR +R+ I LRR+KLP  RLGG+RP R   + R ++ I++R+W     + M  K++    
Sbjct: 19  RRVARQGIPLRRRKLPMVRLGGKRPRRAVVLIRWLRRIRLRRWLKLHYLRMLKKLKETYR 78

Query: 83  --CKDI----ASFNAFLRKILLEISLAIPLLGVSLS 105
              KD+    AS   F  ++ LE S A+P++GVS +
Sbjct: 79  NLVKDMAAAGASLETFHHRVFLESSFALPVMGVSFT 114

BLAST of CSPI07G22460 vs. ExPASy TrEMBL
Match: A0A2P5ACH2 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_345970 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 2.8e-04
Identity = 35/96 (36.46%), Postives = 56/96 (58.33%), Query Frame = 0

Query: 23  RRPSRRWILLRRKKLPTARLGGRRPPRTAAIWRSIKEIKMRKW----AMTMTNKVR---- 82
           RR +R+ I LRR+KLP  RLGG+R  R   + R ++ I++R+W    ++ M  K++    
Sbjct: 19  RRVARQGIPLRRRKLPMVRLGGKRTRRAVVLIRWLRRIRLRRWLKLHSLRMLKKLKETYR 78

Query: 83  --CKDI----ASFNAFLRKILLEISLAIPLLGVSLS 105
              KD+    AS   F  ++ LE S A+P++GVS +
Sbjct: 79  NLVKDMEAAGASLETFHHRVFLESSFALPVMGVSFT 114

BLAST of CSPI07G22460 vs. NCBI nr
Match: KAE8646502.1 (hypothetical protein Csa_015773 [Cucumis sativus])

HSP 1 Score: 194.5 bits (493), Expect = 4.6e-46
Identity = 101/105 (96.19%), Postives = 102/105 (97.14%), Query Frame = 0

Query: 1   MAESSYELEAEDEAKSLLRSGYRRPSRRWILLRRKKLPTARLGGRRPPRTAAIWRSIKEI 60
           MAESSYELEAEDEAKSLLRSGYRRPSRRWILLRRKKLPTARLGGRRPPRTAAIWRSIKEI
Sbjct: 1   MAESSYELEAEDEAKSLLRSGYRRPSRRWILLRRKKLPTARLGGRRPPRTAAIWRSIKEI 60

Query: 61  KMRKWAMTMTNKVRCKDIASFNAFLRKILLEISLAIPLLGVSLSI 106
           KMRKWAMTMTNKVRCKDIASFNAFLRKILLEISLAIPLLG  L +
Sbjct: 61  KMRKWAMTMTNKVRCKDIASFNAFLRKILLEISLAIPLLGDGLEV 105

BLAST of CSPI07G22460 vs. NCBI nr
Match: KAA0059393.1 (hypothetical protein E6C27_scaffold242G001190 [Cucumis melo var. makuwa] >TYK03934.1 hypothetical protein E5676_scaffold347G001310 [Cucumis melo var. makuwa])

HSP 1 Score: 179.5 bits (454), Expect = 1.5e-41
Identity = 93/101 (92.08%), Postives = 96/101 (95.05%), Query Frame = 0

Query: 5   SYELEAEDEAKSLLRSGYRRPSRRWILLRRKKLPTARLGGRRPPRTAAIWRSIKEIKMRK 64
           SY+LEA+DEAKSLLRSGYRRPSRRWILLRRKKLPTARLGGRRPPRT AIWRSIKEIKMRK
Sbjct: 4   SYKLEAQDEAKSLLRSGYRRPSRRWILLRRKKLPTARLGGRRPPRTVAIWRSIKEIKMRK 63

Query: 65  WAMTMTNKVRCKDIASFNAFLRKILLEISLAIPLLGVSLSI 106
           WA  MT KVRCKDIA FNAFL+KILLEISLAIPLLGVSLSI
Sbjct: 64  WAAMMTMKVRCKDIAGFNAFLKKILLEISLAIPLLGVSLSI 104

BLAST of CSPI07G22460 vs. NCBI nr
Match: KAG7013982.1 (hypothetical protein SDJN02_24152, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 119.4 bits (298), Expect = 1.9e-23
Identity = 65/110 (59.09%), Postives = 78/110 (70.91%), Query Frame = 0

Query: 5   SYELEAEDEAKSLLRSGYRRPSRRWILLRRKKLPTARLGGRRPPRTAAIWRSIKEIKMRK 64
           SYE + +DEA+ LL SG+RRP RRWI LRRKKL TARLGGRRPPR A IWRSI++++MRK
Sbjct: 4   SYESQLQDEAQPLLLSGHRRPLRRWIHLRRKKLSTARLGGRRPPRAAVIWRSIRKVRMRK 63

Query: 65  WAMTMTNKVRC------------KDIASFNAFLRKILLEISLAIPLLGVS 103
           W M    KVRC            KD   FN FL++IL+EIS A+P+LG S
Sbjct: 64  WLM----KVRCDCKVKKINELFDKDNGGFNGFLKRILMEISSAVPVLGAS 109

BLAST of CSPI07G22460 vs. NCBI nr
Match: KAG6575440.1 (hypothetical protein SDJN03_26079, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 119.4 bits (298), Expect = 1.9e-23
Identity = 65/110 (59.09%), Postives = 78/110 (70.91%), Query Frame = 0

Query: 5   SYELEAEDEAKSLLRSGYRRPSRRWILLRRKKLPTARLGGRRPPRTAAIWRSIKEIKMRK 64
           SYE + +DEA+ LL SG+RRP RRWI LRRKKL TARLGGRRPPR A IWRSI++++MRK
Sbjct: 4   SYESQLQDEAQPLLLSGHRRPLRRWIHLRRKKLSTARLGGRRPPRAAVIWRSIRKVRMRK 63

Query: 65  WAMTMTNKVRC------------KDIASFNAFLRKILLEISLAIPLLGVS 103
           W M    KVRC            KD   FN FL++IL+EIS A+P+LG S
Sbjct: 64  WLM----KVRCDCKVKKMNELFDKDNGGFNGFLKRILMEISSAVPVLGAS 109

BLAST of CSPI07G22460 vs. NCBI nr
Match: KAG6593556.1 (hypothetical protein SDJN03_13032, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 99.8 bits (247), Expect = 1.5e-17
Identity = 59/119 (49.58%), Postives = 75/119 (63.03%), Query Frame = 0

Query: 5   SYELEAEDEAKSLLRSGYRRPSRRWILLRRKKLPTARLGGRRPPRTAAIWRSIKEIKMRK 64
           S+E + +DEA+SLL S +RRP RRWI LRRK+LP  RLGG RPPR AA WRS   I+ RK
Sbjct: 4   SHESQPKDEAQSLLHSSHRRPHRRWIHLRRKRLPIVRLGGERPPRAAAHWRS---IRFRK 63

Query: 65  WAMTMTNKVRCKDI-------------------ASFNAFLRKILLEISLAIPLLGVSLS 105
           W M    K+RC  +                     F+AFL++IL+EISLA+P+LG SL+
Sbjct: 64  WLM----KIRCDCLVKKLKQLFGKGTGSGGDGGGGFDAFLKRILMEISLAVPVLGASLA 115

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KCH43.1e-48100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G448920 PE=4 SV=1[more]
A0A5A7UTZ47.4e-4292.08Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6J1GVZ86.6e-0640.71uncharacterized protein LOC111458050 OS=Cucurbita moschata OX=3662 GN=LOC1114580... [more]
A0A2P5EDF55.6e-0537.50Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_206290 PE=4 SV... [more]
A0A2P5ACH22.8e-0436.46Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_345970 PE... [more]
Match NameE-valueIdentityDescription
KAE8646502.14.6e-4696.19hypothetical protein Csa_015773 [Cucumis sativus][more]
KAA0059393.11.5e-4192.08hypothetical protein E6C27_scaffold242G001190 [Cucumis melo var. makuwa] >TYK039... [more]
KAG7013982.11.9e-2359.09hypothetical protein SDJN02_24152, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6575440.11.9e-2359.09hypothetical protein SDJN03_26079, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6593556.11.5e-1749.58hypothetical protein SDJN03_13032, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G22460.1CSPI07G22460.1mRNA