CSPI07G16690 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGAATACCCAACCTCGGCGGCCCACTTAAGAACACTCAGAACAACAAGAGAAGGTTTACCAAAGCGCAACCCTCGCCGTCGACGGTCACACTGTCATTCTCAGGTGAACTCTTTGCGCCTTCTTCAATGGTAGCTTATGAATGCGTCTTCAGTATCGGTTATACCTCTTCTTAGAACTTCAATGCAAGTTCCAGTGTCATTTCCTTCAAAATTTATTTTATGGTTAATGAATTGCTGTTTCTTTTTTCTCTAATCGGTTACGTGTGATTCTCTCAAATTCAGAATGCAGAGATCGTTAAATTTTGCCGGTCAGCTCGTGAAGAGGCGAGGATTTTCGACGAATTCTGAGAAAATTGTAGCGGCTGTACTGTTCGAGAGGCTGCCAGTCGTGATTCCGAAGATTGACCCCGTGATCTATGCATTTACGGACTTCCAGTACGTTGTTTTTGCTTGTGTTTTTTTTTTTTTTTACTGAAAGAGTTGCTGTATCTTGACTTGATTTTCATCGGGATAGGGAGTATTTCTTATTTATTTCTTATTTATTTCTTATTTTGATCGTTCAGCTTTGCTCGATTGTCTTCAGGTTTAGGTGGCAACAGCAATATCGACGCAAATATCCTGACGAATTTTTAAATAAAGCTGATGGCAGGTATATTTTCTATCATTTTGTTTGGCTACGTCAAGTATAGAGTTTTGGTTTATGCATTGTTTTAACTTGACTTTCTCTCTGAACTCCTTCAATTCTTGTGACATTTTAAAGCATCAAGTTCTAGAGAGTGCTCTTTTGATCTATTTTTTCATTTTGTCAAACATCATTATTCACAACAATGTGATATTAGTTATCATATTTTAGCTTATTTTATTATTAAAAGTGCAAGAAATTTTTTTTGTGGGCTACTCTACTAGGAGGGCACCAGTTGATTCCAAACTTTGAGCAAGAAAATTTTGTGTAAGTAAAGAACACCTATGTTAGTTAACTTTAAGTACCAATGTAATTTAATTATCAAACGGACGACATTGGCATCCCAATTGAGGAGAGTTGGTTTTAGTCTCTAATTACAATAGATTGCAAATTTCTAATTTGATTTGTTACATTGAGGTAATAACTTTTTCGTTCTCTTGGAAGTTGGAACTAACAACTTTTGGCACCTAAAGAAATTAACGAAAGTTTCCAGTTATTGGTAAAGCTAAATTTTATGACTTCCTTGGATTGGAGCCTTCTAAGATGAAGCTTTATGTTGATAAATCTTAGGGCTTTCTTTTGTAGTGAGCTTAGTATAATGTAGCTTTTGGGTGATCAATTTATATTTTCTTTGAATTATTTGGATGGATTATCTGGGTGGAGGATGACCAACTCTGTAACACGTTTTTCCTTAATTATCTAAATTCATGTTTATTTCAAATGGATGGCTGCGGTACTTGAATTTCGTATATATTACTACCACTATAGCGCAATGTCATATGCCCATAGGCCTTCAAAATATTTATATTTTGAAGGCAATCTTATCTCATGTTACTATCAATTTTCAGTTAGCTAATTGTTGGAGCTTATTGTCCAAACACTGGATAAATGAGAATACATGATTTTTCTTTCTTTTGGCAATTGTATGACTCAAGCTGCTGATAACAGGGGAAAAGGTGACTACCAAATTGATTATGTTCCAGCTCCACGGATTACTGAAGCTGACAAAACAAACGACAGGAAGTATGCAATCTCTTCTTTCTTTCTTTCTTTCTTCTTCTTTTTTTTTCCTTCTCTCTCCTTCTCTCTTTAATATAACTTAGAATTGATTGAATGAAGGTTTCTTTATCCATGCAACGTCACTATTGAGTGAAAAGAAACACAATCTATGAGTTTTTGTTCTTGTTCATGCTAAATAATCTTCACTGTTGTGACTTTTCTTCCCTGAATTTTTTGTGGCACCTTGCAGTTCTTTTGTGTTTGTTTGAACATATTTTCTCGTTTCTTATATAAAAGAAAAAAAACAAAATAACACTTTTATATCCCAATATTACACAGTGCATATCAAGCTCATGTGCATGCTGCTCTGTTAGGTGCTTTCAACTCATTTATTTTAGTGAAGCGCTCTTATATCTTTAAAACCATAGTTCTACTTAGTTTCATGATGACTGATGAAACTTGTTTTAGCCCTGGGGAAATCCCTTTCATTTGATTCATGATAAAATTTCCAGATATCGTTGGATATCTAATAAATGTTAAAATTGTATTGCTTTGTTTGTATATCAGGCTATTGATATCTTTTCTACTCTACAACTGAAGTTTCTAGATGGTGTCTCTTAAATACAGAGACTCCCTTTTCTCGCGTTTTATTTAGAGTTCAGGCCATCTGATCCAGGTCATTAGTTTGCTACATTTTAAGCTCGAAATTGAGATTTACATTCTGGTTACTGGAATTGTTCTCTCCTTCTAGGTCACTGAAAAGAGCACTTGACAGAAGACTTTATCTTCTTCTCTATGGTCCCTCCATTGGGGCACCTGATGAGAAACCCATCTGGCACTTTCCAGAAAAAGCTTACGAGACCGAGGAGACATTACGTAAAGTAAGAGTTGGCTACTGGTACTCTTCAGTTCTATTTTTCATCAATTTTACCCTTCTAACTTTTAAGTTCTACAGTGTGCAGAGTCTGCCTTAAAGTCCGTCCTTGGAGATCTTTCTCAAACATATTTTGTTGGTAATGCTCCAATGGGTCATATGGTTGTACCACCTACAGAAACTGCACCAGTTCCAACTTTGAAGGTATATGTCTTCTACTAAAAAATTTATATCATATAATAACTTCAAGCATCGGCAATTGGAATTGGTTGAAATATCATTTTGGCCTCTTTACTTTGGGTTTTGTTATGCTTTCGTTAACGTATTTTCAATAAATCTTAAATTTAATCATTTAGAGTTATTTTTAAACACTTGAAAGTGTAGGAACTAAAATGGAATAGAACCCAAATTACATGAATGAATCCAAAGTTTATACATGAATGCTGAGTATTTAGTACAATGAGGTCATTTATGTGTTGGCTTAAATGAAATCTCTCCTGTTTGCCAGAGATTCTTTTTTAAGTCTCAAGTGGTTGCAGCCGATAAATTTGATATTGGGAAATGTGAAGATTTTGTATGGGTTACAAAGGATGAATTGTTGGAGCATTTTCCTGATCAAGCTGAATTTTTCAAGAAGATCATCATCAGTTGATGTTAGTAGATTGACGATAGGAAGCCTCACATAGATTGCCTCAACCAACAAATTTATGGTCAGGATGTAAGTGGCGTAGATGATTTGAGTTATGAAATGTTAAATTAAGTGTTTGAGGCTGGAGGTTTTGTTTGTTGTTCTGATGTAAAATGGACGAATGAGGATACCAATTTGGAATTAGTTTTAGGCAATTTCCTCTTTGCTGTTTCTTTGATTATTGGACAGTCAGAATAAATGGTTCGATCCTCTTATTCTGATTTCTCGAACCAACAATAGCAATCGCAAATTTTGAATATAACGACTTTTTTCGTTTCTTTTTGGTGTTATGAGAAGCAATGAATCCTTCACTTCATTGTCGTGG AGAATACCCAACCTCGGCGGCCCACTTAAGAACACTCAGAACAACAAGAGAAGGTTTACCAAAGCGCAACCCTCGCCGTCGACGGTCACACTGTCATTCTCAGAATGCAGAGATCGTTAAATTTTGCCGGTCAGCTCGTGAAGAGGCGAGGATTTTCGACGAATTCTGAGAAAATTGTAGCGGCTGTACTGTTCGAGAGGCTGCCAGTCGTGATTCCGAAGATTGACCCCGTGATCTATGCATTTACGGACTTCCAGTTTAGGTGGCAACAGCAATATCGACGCAAATATCCTGACGAATTTTTAAATAAAGCTGATGGCAGGGGAAAAGGTGACTACCAAATTGATTATGTTCCAGCTCCACGGATTACTGAAGCTGACAAAACAAACGACAGGAAGTCACTGAAAAGAGCACTTGACAGAAGACTTTATCTTCTTCTCTATGGTCCCTCCATTGGGGCACCTGATGAGAAACCCATCTGGCACTTTCCAGAAAAAGCTTACGAGACCGAGGAGACATTACGTAAATGTGCAGAGTCTGCCTTAAAGTCCGTCCTTGGAGATCTTTCTCAAACATATTTTGTTGGTAATGCTCCAATGGGTCATATGGTTGTACCACCTACAGAAACTGCACCAGTTCCAACTTTGAAGAGATTCTTTTTTAAGTCTCAAGTGGTTGCAGCCGATAAATTTGATATTGGGAAATGTGAAGATTTTGTATGGGTTACAAAGGATGAATTGTTGGAGCATTTTCCTGATCAAGCTGAATTTTTCAAGAAGATCATCATCAGTTGATGTTAGTAGATTGACGATAGGAAGCCTCACATAGATTGCCTCAACCAACAAATTTATGGTCAGGATGTAAGTGGCGTAGATGATTTGAGTTATGAAATGTTAAATTAAGTGTTTGAGGCTGGAGGTTTTGTTTGTTGTTCTGATGTAAAATGGACGAATGAGGATACCAATTTGGAATTAGTTTTAGGCAATTTCCTCTTTGCTGTTTCTTTGATTATTGGACAGTCAGAATAAATGGTTCGATCCTCTTATTCTGATTTCTCGAACCAACAATAGCAATCGCAAATTTTGAATATAACGACTTTTTTCGTTTCTTTTTGGTGTTATGAGAAGCAATGAATCCTTCACTTCATTGTCGTGG ATGCAGAGATCGTTAAATTTTGCCGGTCAGCTCGTGAAGAGGCGAGGATTTTCGACGAATTCTGAGAAAATTGTAGCGGCTGTACTGTTCGAGAGGCTGCCAGTCGTGATTCCGAAGATTGACCCCGTGATCTATGCATTTACGGACTTCCAGTTTAGGTGGCAACAGCAATATCGACGCAAATATCCTGACGAATTTTTAAATAAAGCTGATGGCAGGGGAAAAGGTGACTACCAAATTGATTATGTTCCAGCTCCACGGATTACTGAAGCTGACAAAACAAACGACAGGAAGTCACTGAAAAGAGCACTTGACAGAAGACTTTATCTTCTTCTCTATGGTCCCTCCATTGGGGCACCTGATGAGAAACCCATCTGGCACTTTCCAGAAAAAGCTTACGAGACCGAGGAGACATTACGTAAATGTGCAGAGTCTGCCTTAAAGTCCGTCCTTGGAGATCTTTCTCAAACATATTTTGTTGGTAATGCTCCAATGGGTCATATGGTTGTACCACCTACAGAAACTGCACCAGTTCCAACTTTGAAGAGATTCTTTTTTAAGTCTCAAGTGGTTGCAGCCGATAAATTTGATATTGGGAAATGTGAAGATTTTGTATGGGTTACAAAGGATGAATTGTTGGAGCATTTTCCTGATCAAGCTGAATTTTTCAAGAAGATCATCATCAGTTGA MQRSLNFAGQLVKRRGFSTNSEKIVAAVLFERLPVVIPKIDPVIYAFTDFQFRWQQQYRRKYPDEFLNKADGRGKGDYQIDYVPAPRITEADKTNDRKSLKRALDRRLYLLLYGPSIGAPDEKPIWHFPEKAYETEETLRKCAESALKSVLGDLSQTYFVGNAPMGHMVVPPTETAPVPTLKRFFFKSQVVAADKFDIGKCEDFVWVTKDELLEHFPDQAEFFKKIIIS* Homology
BLAST of CSPI07G16690 vs. ExPASy Swiss-Prot
Match: Q9EQI8 (39S ribosomal protein L46, mitochondrial OS=Mus musculus OX=10090 GN=Mrpl46 PE=1 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 7.8e-15 Identity = 51/136 (37.50%), Postives = 71/136 (52.21%), Query Frame = 0
BLAST of CSPI07G16690 vs. ExPASy Swiss-Prot
Match: P36528 (54S ribosomal protein L17, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MRPL17 PE=1 SV=2) HSP 1 Score: 82.0 bits (201), Expect = 1.0e-14 Identity = 59/166 (35.54%), Postives = 80/166 (48.19%), Query Frame = 0
BLAST of CSPI07G16690 vs. ExPASy Swiss-Prot
Match: Q9H2W6 (39S ribosomal protein L46, mitochondrial OS=Homo sapiens OX=9606 GN=MRPL46 PE=1 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 1.7e-14 Identity = 51/129 (39.53%), Postives = 67/129 (51.94%), Query Frame = 0
BLAST of CSPI07G16690 vs. ExPASy Swiss-Prot
Match: Q5RBU2 (39S ribosomal protein L46, mitochondrial OS=Pongo abelii OX=9601 GN=MRPL46 PE=2 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 1.7e-14 Identity = 51/129 (39.53%), Postives = 67/129 (51.94%), Query Frame = 0
BLAST of CSPI07G16690 vs. ExPASy Swiss-Prot
Match: Q5RK00 (39S ribosomal protein L46, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mrpl46 PE=2 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 2.3e-14 Identity = 51/136 (37.50%), Postives = 70/136 (51.47%), Query Frame = 0
BLAST of CSPI07G16690 vs. ExPASy TrEMBL
Match: A0A0A0KAL5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G391280 PE=4 SV=1) HSP 1 Score: 470.3 bits (1209), Expect = 4.9e-129 Identity = 228/229 (99.56%), Postives = 229/229 (100.00%), Query Frame = 0
BLAST of CSPI07G16690 vs. ExPASy TrEMBL
Match: A0A1S4DYN0 (54S ribosomal protein L17, mitochondrial isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492711 PE=4 SV=1) HSP 1 Score: 447.6 bits (1150), Expect = 3.4e-122 Identity = 215/229 (93.89%), Postives = 222/229 (96.94%), Query Frame = 0
BLAST of CSPI07G16690 vs. ExPASy TrEMBL
Match: A0A5D3D407 (54S ribosomal protein L17 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G002200 PE=4 SV=1) HSP 1 Score: 447.6 bits (1150), Expect = 3.4e-122 Identity = 215/229 (93.89%), Postives = 222/229 (96.94%), Query Frame = 0
BLAST of CSPI07G16690 vs. ExPASy TrEMBL
Match: A0A1S3BS77 (54S ribosomal protein L17, mitochondrial isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492711 PE=4 SV=1) HSP 1 Score: 447.6 bits (1150), Expect = 3.4e-122 Identity = 215/229 (93.89%), Postives = 222/229 (96.94%), Query Frame = 0
BLAST of CSPI07G16690 vs. ExPASy TrEMBL
Match: A0A6J1JQ58 (39S ribosomal protein L46, mitochondrial-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111488836 PE=4 SV=1) HSP 1 Score: 434.1 bits (1115), Expect = 3.9e-118 Identity = 208/245 (84.90%), Postives = 229/245 (93.47%), Query Frame = 0
BLAST of CSPI07G16690 vs. NCBI nr
Match: XP_011659322.1 (39S ribosomal protein L46, mitochondrial isoform X2 [Cucumis sativus]) HSP 1 Score: 496.9 bits (1278), Expect = 1.0e-136 Identity = 244/245 (99.59%), Postives = 245/245 (100.00%), Query Frame = 0
BLAST of CSPI07G16690 vs. NCBI nr
Match: KGN44851.1 (hypothetical protein Csa_016821 [Cucumis sativus]) HSP 1 Score: 470.3 bits (1209), Expect = 1.0e-128 Identity = 228/229 (99.56%), Postives = 229/229 (100.00%), Query Frame = 0
BLAST of CSPI07G16690 vs. NCBI nr
Match: XP_004148875.2 (54S ribosomal protein L17, mitochondrial isoform X1 [Cucumis sativus]) HSP 1 Score: 470.3 bits (1209), Expect = 1.0e-128 Identity = 228/229 (99.56%), Postives = 229/229 (100.00%), Query Frame = 0
BLAST of CSPI07G16690 vs. NCBI nr
Match: XP_011659323.1 (39S ribosomal protein L46, mitochondrial isoform X3 [Cucumis sativus]) HSP 1 Score: 470.3 bits (1209), Expect = 1.0e-128 Identity = 228/229 (99.56%), Postives = 229/229 (100.00%), Query Frame = 0
BLAST of CSPI07G16690 vs. NCBI nr
Match: XP_008451408.1 (PREDICTED: 54S ribosomal protein L17, mitochondrial isoform X1 [Cucumis melo]) HSP 1 Score: 447.6 bits (1150), Expect = 7.0e-122 Identity = 215/229 (93.89%), Postives = 222/229 (96.94%), Query Frame = 0
BLAST of CSPI07G16690 vs. TAIR 10
Match: AT1G14620.1 (decoy ) HSP 1 Score: 335.1 bits (858), Expect = 4.7e-92 Identity = 157/220 (71.36%), Postives = 184/220 (83.64%), Query Frame = 0
BLAST of CSPI07G16690 vs. TAIR 10
Match: AT1G14620.2 (decoy ) HSP 1 Score: 256.9 bits (655), Expect = 1.6e-68 Identity = 120/173 (69.36%), Postives = 144/173 (83.24%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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