CSPI07G12860 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGATATTTGTGAGGACAACAACCCCCAAATATCTCCACAATGGTATGATATTGTCCATTTTGGGTATATACCCTCATGACTTTGCTTTTGGTATCATTCCAAAAGACCTCATACCAATGGAATTAATTGTCCTTACTTATATACCAAAGATCATACTTTTATCTAACCGACGCGAAACTTTGATCGGATTCACAATATTTGTGAACCGATTAACCCACCAAGTGGACCATTTAAGTATTTTATGGTCTTAATAGACGCATCCACCAAATAGTAGCATATGTGCATGTAGCTCATATTCTTAAGAGCACAATTTCTTGATTATATAATTAAGAATATTCGACTTGATAATGCTAGTGAATTTACATCCCAAACATTTGATAATTATTGTATGTCTATTGGGATCAGTGTTGAACATCATGTAACTCATATTCATATACAAAATGGTTTAGCTGAATCATTTATAAAACGTTTGCAATTAATTGCTAGACCCTTGCTTACAAGAGTTAAACTCCATACATCTGTATGGGAACATGTTATTTTGAATGTTGTATCACTCATGCGTATTAGGCCAACAACTTATCACAAGTAGTCGCCATTACAATTAGCATATGACCATGAGCCAAATATTTCTCATTTGAGAACTTTTGGATGTGCAGTATATGTTCAAATTATTCTACCACAACGTACTAAGATGGGTCCTTAAAGGAGACTATGAATATATGTTGGTTTTGATTCTCCATCAATTATTAAATATTTTGATCCCCTTATGGGAGATGTGTTTATTGCATGATTTGTTAATTGTAATTTTAATGAGACAAATCTTCCAATATTAGGGAGAGGAATTAAGAAGTTGAAAAAAAAATTACATGGAATGTATCATTATTGTCTCATTTAGATCCTCGTACAGATCAATGTGAACTTGAAGTTCGAAAAATAATTCATTTACAAAATGTAGTAAATCAGTTACCAGATGCATTTGTCGATGCAAAGAAAGTAACTAAATCACATATAGTAGCTGCAAATGTTCCATCAAAGATTGATATCCCTACACAACATGTTGTCATTGATGCATCACGAACTAGCCAGAAGTGTGATAGACCAGTTGATTCCAAAGACAAAAATCCTCAGAAAAGGAATTGA ATGGTGATATTTGTGAGGACAACAACCCCCAAATATCTCCACAATGATCCTCGTACAGATCAATGTGAACTTGAAGTTCGAAAAATAATTCATTTACAAAATGTAGTAAATCAGTTACCAGATGCATTTGTCGATGCAAAGAAAGTAACTAAATCACATATAGTAGCTGCAAATGTTCCATCAAAGATTGATATCCCTACACAACATGTTGTCATTGATGCATCACGAACTAGCCAGAAGTGTGATAGACCAGTTGATTCCAAAGACAAAAATCCTCAGAAAAGGAATTGA ATGGTGATATTTGTGAGGACAACAACCCCCAAATATCTCCACAATGATCCTCGTACAGATCAATGTGAACTTGAAGTTCGAAAAATAATTCATTTACAAAATGTAGTAAATCAGTTACCAGATGCATTTGTCGATGCAAAGAAAGTAACTAAATCACATATAGTAGCTGCAAATGTTCCATCAAAGATTGATATCCCTACACAACATGTTGTCATTGATGCATCACGAACTAGCCAGAAGTGTGATAGACCAGTTGATTCCAAAGACAAAAATCCTCAGAAAAGGAATTGA MVIFVRTTTPKYLHNDPRTDQCELEVRKIIHLQNVVNQLPDAFVDAKKVTKSHIVAANVPSKIDIPTQHVVIDASRTSQKCDRPVDSKDKNPQKRN* Homology
BLAST of CSPI07G12860 vs. ExPASy TrEMBL
Match: A0A438CTC8 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_1564 PE=4 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 4.7e-19 Identity = 53/87 (60.92%), Postives = 65/87 (74.71%), Query Frame = 0
BLAST of CSPI07G12860 vs. ExPASy TrEMBL
Match: A5AU99 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_015503 PE=4 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 4.7e-19 Identity = 50/80 (62.50%), Postives = 62/80 (77.50%), Query Frame = 0
BLAST of CSPI07G12860 vs. ExPASy TrEMBL
Match: A0A6D2JDS3 (Uncharacterized protein OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS28746 PE=4 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 6.2e-19 Identity = 54/94 (57.45%), Postives = 66/94 (70.21%), Query Frame = 0
BLAST of CSPI07G12860 vs. ExPASy TrEMBL
Match: A0A438C2Q1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_3511 PE=4 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 1.4e-18 Identity = 52/87 (59.77%), Postives = 64/87 (73.56%), Query Frame = 0
BLAST of CSPI07G12860 vs. ExPASy TrEMBL
Match: A0A438HZK0 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_792 PE=4 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 1.4e-18 Identity = 52/87 (59.77%), Postives = 64/87 (73.56%), Query Frame = 0
BLAST of CSPI07G12860 vs. NCBI nr
Match: KAG7537104.1 (Zinc finger CCHC-type superfamily [Arabidopsis suecica]) HSP 1 Score: 105.5 bits (262), Expect = 2.6e-19 Identity = 55/94 (58.51%), Postives = 67/94 (71.28%), Query Frame = 0
BLAST of CSPI07G12860 vs. NCBI nr
Match: KAG7560697.1 (Zinc finger CCHC-type [Arabidopsis thaliana x Arabidopsis arenosa]) HSP 1 Score: 104.0 bits (258), Expect = 7.5e-19 Identity = 54/94 (57.45%), Postives = 66/94 (70.21%), Query Frame = 0
BLAST of CSPI07G12860 vs. NCBI nr
Match: RVW26456.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]) HSP 1 Score: 103.6 bits (257), Expect = 9.8e-19 Identity = 53/87 (60.92%), Postives = 65/87 (74.71%), Query Frame = 0
BLAST of CSPI07G12860 vs. NCBI nr
Match: CAN71647.1 (hypothetical protein VITISV_015503 [Vitis vinifera]) HSP 1 Score: 103.6 bits (257), Expect = 9.8e-19 Identity = 50/80 (62.50%), Postives = 62/80 (77.50%), Query Frame = 0
BLAST of CSPI07G12860 vs. NCBI nr
Match: KAF7152015.1 (hypothetical protein RHSIM_Rhsim01G0238600 [Rhododendron simsii]) HSP 1 Score: 103.2 bits (256), Expect = 1.3e-18 Identity = 51/85 (60.00%), Postives = 66/85 (77.65%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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