CSPI07G12710 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI07G12710
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	CACTA en-spm transposon protein
Location	Chr7: 10994220 .. 10994677 (-)
RNA-Seq Expression	CSPI07G12710
Synteny	CSPI07G12710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGAACGATACGTACAGCAGAATGGGAGAATTCTCATTTCCATCCCCTGTGGAGGGGACAGGTCTGTCTCACCACACGCCCCTCATTTCAGTTGCACGATTAGTGTGCTGACACGAGACACATTTCCTATTTAGGCCCTAAAGTGGGATATGTGCCACCGGAGTGCATCGAGGTCGTCAAGGGCGGCCTAAAGGTAAGTCTGTAAATTCATAAACATTTATGTATGTTTCTATTTCCTTATTAAAGCTTTACTAACTTGAAATATATTTCTTTTGTAGCAATTTTTCGTGTTTGATTGTAACGATCCAGCACTGAATCGATTTGTTGAGCATCAAATGCTCACTGTGTGGAAGGAATTCAGTTCAAGTAATTATCGCCATTTTAAGAAATTTAGGGACCCTAAACAAGCACGAGCAAACCCACCCTCGAGATTGATCAATCGGGTGGAAGATTGA

mRNA sequence

ATGTCGAACGATACGTACAGCAGAATGGGAGAATTCTCATTTCCATCCCCTGTGGAGGGGACAGGCCCTAAAGTGGGATATGTGCCACCGGAGTGCATCGAGGTCGTCAAGGGCGGCCTAAAGCAATTTTTCGTGTTTGATTGTAACGATCCAGCACTGAATCGATTTGTTGAGCATCAAATGCTCACTGTGTGGAAGGAATTCAGTTCAAGTAATTATCGCCATTTTAAGAAATTTAGGGACCCTAAACAAGCACGAGCAAACCCACCCTCGAGATTGATCAATCGGGTGGAAGATTGA

Coding sequence (CDS)

ATGTCGAACGATACGTACAGCAGAATGGGAGAATTCTCATTTCCATCCCCTGTGGAGGGGACAGGCCCTAAAGTGGGATATGTGCCACCGGAGTGCATCGAGGTCGTCAAGGGCGGCCTAAAGCAATTTTTCGTGTTTGATTGTAACGATCCAGCACTGAATCGATTTGTTGAGCATCAAATGCTCACTGTGTGGAAGGAATTCAGTTCAAGTAATTATCGCCATTTTAAGAAATTTAGGGACCCTAAACAAGCACGAGCAAACCCACCCTCGAGATTGATCAATCGGGTGGAAGATTGA

Protein sequence

MSNDTYSRMGEFSFPSPVEGTGPKVGYVPPECIEVVKGGLKQFFVFDCNDPALNRFVEHQMLTVWKEFSSSNYRHFKKFRDPKQARANPPSRLINRVED*

Homology

[Close]

BLAST of CSPI07G12710 vs. ExPASy TrEMBL
Match: A0A5D3CR33 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold556G00190 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 6.4e-19
Identity = 54/109 (49.54%), Postives = 72/109 (66.06%), Query Frame = 0


Query: 1   MSNDTYSRMGEFSFPSPVEGTGPKV---GYVPP-------ECIEVVKGGLKQFFVFDCND 60
           ++N + +  G+ SFP+  EG G      G  P        E IEVVKG L++FFV D ND
Sbjct: 173 LNNASGAASGKPSFPTHHEGVGKNTSGKGVFPDAWTDVGREYIEVVKGDLQRFFVLDFND 232

Query: 61  PALNRFVEHQMLTVWKEFSSSNYRHFKKFRDPKQARANPPSRLINRVED 100
            A+NRFVEHQMLT +KEF +  ++HFKK+ DP++ARANPP+ L+ R ED
Sbjct: 233 QAMNRFVEHQMLTTFKEFRADCHKHFKKYSDPEEARANPPNALVGRDED 281

[Close]

BLAST of CSPI07G12710 vs. ExPASy TrEMBL
Match: A0A5A7UHN6 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2510G00370 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.9e-18
Identity = 47/69 (68.12%), Postives = 56/69 (81.16%), Query Frame = 0


Query: 31  ECIEVVKGGLKQFFVFDCNDPALNRFVEHQMLTVWKEFSSSNYRHFKKFRDPKQARANPP 90
           E IEVVKG L++FFV D ND A+NRFVEHQMLT +KEF  + +RHFKK+ DPKQARANPP
Sbjct: 100 EYIEVVKGALQRFFVLDFNDQAMNRFVEHQMLTSFKEFRGNCHRHFKKYSDPKQARANPP 159

Query: 91  SRLINRVED 100
             L+ R+ED
Sbjct: 160 HILVRRLED 168

[Close]

BLAST of CSPI07G12710 vs. ExPASy TrEMBL
Match: A0A5D3BPJ1 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold612G00210 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 2.4e-18
Identity = 47/72 (65.28%), Postives = 57/72 (79.17%), Query Frame = 0


Query: 28  VPPECIEVVKGGLKQFFVFDCNDPALNRFVEHQMLTVWKEFSSSNYRHFKKFRDPKQARA 87
           V  E IEVVKG LK+ FV D ND A+NRFVEHQMLT +KEF ++ +RHFKK+ DPK+ARA
Sbjct: 79  VEREYIEVVKGDLKRLFVLDFNDQAMNRFVEHQMLTTFKEFRANCHRHFKKYSDPKEARA 138

Query: 88  NPPSRLINRVED 100
           NPP+ L+ R ED
Sbjct: 139 NPPNALVGRYED 150

[Close]

BLAST of CSPI07G12710 vs. ExPASy TrEMBL
Match: A0A5D3DFJ8 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1428G00370 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 7.0e-18
Identity = 44/69 (63.77%), Postives = 57/69 (82.61%), Query Frame = 0


Query: 31  ECIEVVKGGLKQFFVFDCNDPALNRFVEHQMLTVWKEFSSSNYRHFKKFRDPKQARANPP 90
           E IEVVKGGL++FFV D ND A+N+FVEHQM+T +KEF +  +RHFKK+ DP++ARANPP
Sbjct: 101 EYIEVVKGGLQRFFVLDFNDEAMNKFVEHQMVTTFKEFRADCHRHFKKYSDPEEARANPP 160

Query: 91  SRLINRVED 100
           + L+ R ED
Sbjct: 161 NALVGRDED 169

[Close]

BLAST of CSPI07G12710 vs. ExPASy TrEMBL
Match: A0A5A7V882 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G004710 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 9.2e-18
Identity = 45/69 (65.22%), Postives = 56/69 (81.16%), Query Frame = 0


Query: 31  ECIEVVKGGLKQFFVFDCNDPALNRFVEHQMLTVWKEFSSSNYRHFKKFRDPKQARANPP 90
           E IEVVKG L++ FVFD ND A+NRFVEHQMLT +KEF +  +RHFKK+ DP++ARANPP
Sbjct: 185 EYIEVVKGDLQRLFVFDFNDQAMNRFVEHQMLTTFKEFRADCHRHFKKYSDPEEARANPP 244

Query: 91  SRLINRVED 100
           + L+ R ED
Sbjct: 245 NALVGRDED 253

[Close]

BLAST of CSPI07G12710 vs. NCBI nr
Match: TYK13484.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 103.2 bits (256), Expect = 1.3e-18
Identity = 54/109 (49.54%), Postives = 72/109 (66.06%), Query Frame = 0


Query: 1   MSNDTYSRMGEFSFPSPVEGTGPKV---GYVPP-------ECIEVVKGGLKQFFVFDCND 60
           ++N + +  G+ SFP+  EG G      G  P        E IEVVKG L++FFV D ND
Sbjct: 173 LNNASGAASGKPSFPTHHEGVGKNTSGKGVFPDAWTDVGREYIEVVKGDLQRFFVLDFND 232

Query: 61  PALNRFVEHQMLTVWKEFSSSNYRHFKKFRDPKQARANPPSRLINRVED 100
            A+NRFVEHQMLT +KEF +  ++HFKK+ DP++ARANPP+ L+ R ED
Sbjct: 233 QAMNRFVEHQMLTTFKEFRADCHKHFKKYSDPEEARANPPNALVGRDED 281

[Close]

BLAST of CSPI07G12710 vs. NCBI nr
Match: KAA0053195.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK00147.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 101.7 bits (252), Expect = 3.8e-18
Identity = 47/69 (68.12%), Postives = 56/69 (81.16%), Query Frame = 0


Query: 31  ECIEVVKGGLKQFFVFDCNDPALNRFVEHQMLTVWKEFSSSNYRHFKKFRDPKQARANPP 90
           E IEVVKG L++FFV D ND A+NRFVEHQMLT +KEF  + +RHFKK+ DPKQARANPP
Sbjct: 100 EYIEVVKGALQRFFVLDFNDQAMNRFVEHQMLTSFKEFRGNCHRHFKKYSDPKQARANPP 159

Query: 91  SRLINRVED 100
             L+ R+ED
Sbjct: 160 HILVRRLED 168

[Close]

BLAST of CSPI07G12710 vs. NCBI nr
Match: KAA0048341.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK01124.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 101.3 bits (251), Expect = 5.0e-18
Identity = 47/72 (65.28%), Postives = 57/72 (79.17%), Query Frame = 0


Query: 28  VPPECIEVVKGGLKQFFVFDCNDPALNRFVEHQMLTVWKEFSSSNYRHFKKFRDPKQARA 87
           V  E IEVVKG LK+ FV D ND A+NRFVEHQMLT +KEF ++ +RHFKK+ DPK+ARA
Sbjct: 79  VEREYIEVVKGDLKRLFVLDFNDQAMNRFVEHQMLTTFKEFRANCHRHFKKYSDPKEARA 138

Query: 88  NPPSRLINRVED 100
           NPP+ L+ R ED
Sbjct: 139 NPPNALVGRYED 150

[Close]

BLAST of CSPI07G12710 vs. NCBI nr
Match: TYK22325.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 99.8 bits (247), Expect = 1.5e-17
Identity = 44/69 (63.77%), Postives = 57/69 (82.61%), Query Frame = 0


Query: 31  ECIEVVKGGLKQFFVFDCNDPALNRFVEHQMLTVWKEFSSSNYRHFKKFRDPKQARANPP 90
           E IEVVKGGL++FFV D ND A+N+FVEHQM+T +KEF +  +RHFKK+ DP++ARANPP
Sbjct: 101 EYIEVVKGGLQRFFVLDFNDEAMNKFVEHQMVTTFKEFRADCHRHFKKYSDPEEARANPP 160

Query: 91  SRLINRVED 100
           + L+ R ED
Sbjct: 161 NALVGRDED 169

[Close]

BLAST of CSPI07G12710 vs. NCBI nr
Match: KAA0062115.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 99.4 bits (246), Expect = 1.9e-17
Identity = 45/69 (65.22%), Postives = 56/69 (81.16%), Query Frame = 0


Query: 31  ECIEVVKGGLKQFFVFDCNDPALNRFVEHQMLTVWKEFSSSNYRHFKKFRDPKQARANPP 90
           E IEVVKG L++ FVFD ND A+NRFVEHQMLT +KEF +  +RHFKK+ DP++ARANPP
Sbjct: 185 EYIEVVKGDLQRLFVFDFNDQAMNRFVEHQMLTTFKEFRADCHRHFKKYSDPEEARANPP 244

Query: 91  SRLINRVED 100
           + L+ R ED
Sbjct: 245 NALVGRDED 253

The following BLAST results are available for this feature:

BLAST of CSPI07G12710 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI07G12710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CR33	6.4e-19	49.54	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5A7UHN6	1.9e-18	68.12	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5D3BPJ1	2.4e-18	65.28	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5D3DFJ8	7.0e-18	63.77	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5A7V882	9.2e-18	65.22	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]

BLAST of CSPI07G12710 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK13484.1	1.3e-18	49.54	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
KAA0053195.1	3.8e-18	68.12	CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK00147.1 CACTA en-...	[more]
KAA0048341.1	5.0e-18	65.28	CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK01124.1 CACTA en-...	[more]
TYK22325.1	1.5e-17	63.77	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
KAA0062115.1	1.9e-17	65.22	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]

BLAST of CSPI07G12710 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 79..99

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI07G12710.1	CSPI07G12710.1	mRNA