CSPI07G12100 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI07G12100
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	40S ribosomal protein S4
Location	Chr7: 10351202 .. 10357475 (-)
RNA-Seq Expression	CSPI07G12100
Synteny	CSPI07G12100

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGAAGGCACGTGCTCGACAATTACTTAAATACAAAATTCCTCTTCTCCTTTTCGTCTCTGAGAGAACCCTAGCATCTTCCACAAACGCCACGCCGCTGCTTCCTCCCCACAGCTGCCGACTCTAGTTTAGCTCCGAAATATGGTCAGTGATCTCATTTAGCTCTTTCTTCTCTTGTTTCATTTGTGCATTCTATTTTTCCTTCTATCCTTCTATCCTTCTGGAGTTTTAGACTTCCGTATCTGTTTTGGGTCTCTTGTTCGTCTTCAGGTGGATTACTTTTTTATGTGGTTACTTCTTCATTTTGTTAATTTTCTGAGACAATTTTCTGGGCACAACGATGCGAAAGTTTTCACCAATGGGTTCGTTCTATTTAAGTATAAATTGATTTATGTGTCCTTGTATGGGACTGTATTCTACATGCAAGATGAGTATTGCCATTGGCACGGTTTTGTCCACTGTTATTTATTTTTCCTCATGATGTGCGGATTTCTGTGTATATGCTTGTGTTTTGTTGTTCTAAATAGACACATTTTTCTTTGAAATAAATGCCTATGGCGATGACAGGCAAGGGGACTGAAGAAGCATTTAAAGAGGCTCAATGCTCCGAAGCATTGGATGCTTGACAAGCTTGGTGGTGCATTTGTGAGTCAAATTTGTTGTTTCATTTATTTTATTTTTTCTCTCGAGTTTATGCATTACGCTTATTTCTGACAGTTCTACCTCTCAAATCTCTTTGTAGGCCCCCAAACCTTCATCTGGACCTCACAAGTCGAGGGAATGCCTCCCTTTGATCCTTATATTGAGAAACCGACTCAAATATGCCCTCACGTACCGTGAGGTAATTGCAATATTAATGCAACGACATGTTTTGGTCGATGGGAAGGTTAGGACAGACAAGACTTTCCCTGCTGGTTTCATGGGTACGTTATCTTGAACTTTGTAACCTTACCATTGTTTGAATTCCAATGTCTACTGACCCTTTTTTAGAGTGCCACTATAGGTGTTATTATAAGAGCATGCTAAATTGTTTTTTTTTTATTCTTGGAATTGACTGTTGATTTTATGAACTGAATTAGTGAAGTAATCACTCATCATTTTGAGATTGTTTTCCTTCGGTTATAGTGCCCCCTACGCTTTAGGCTTAGTGTTATACTTCATTGTTTTTTATGTTATTTATATTTAGTCTTTAGTATTAATTAATTTTAAGGCTTTAACAATCAATATTTTATTCATTTATTTATTTATTGCGTCTTGCTTCGCTCTGGTGACACCTCTTTGTTGCCTCTTGCCTAGAGGCAATGAAGTGACTTGTTGCCTTGAGGTGTGCCTTGTGGCTTGCGCTTTGAAAACACTGGTAACACTTTGAAAGGCCCAATTGCCTATCTTCAATTCATTGTAAGTGCCAGTAGGAAATCTAGCTTTGCGTAGATGAATTACAAGGTCCCCTTCTACAAAGTTAAGCACCCTCTGAGATTTTTCCTAAGCCAAGGGCCATTTTACTTAATTGATCTATCACAACCACCGCAACATCAAAACTTACTGTCTTTGGAACTCATCAAACAACTTCTGTACTTCTAGAGGAGGTTTACTATTGTCTCTTCTGCCTTTTCAACTATCACAAGGTCCAATATATCAACCTCCCTTTCGTTATCAAACATTTTTCCACTGATTGTGCTAAGCTAATGATTGTTGCGATCTTTCTTAGAACTAACTCTGTCATCATTTTTATTATTCAATGGGAGTAATACCACTTTCTCCCCATCCATTGAAATTCATAAGTATTCTCTCTTCTCTTGTGCAATGTTCGATTATGCAAGGTTCGAGTATTAAATTGCCAAGGTATTCCAAATAGAATGTGATGTACGTCCATATCTAACATATTGCAAACAATTCGGTCCATGTGTTTACTTCCAATTGAAAGAGTAACTAGGCAAATCTCATTTAGTTGAGCCTCTCCACCTTTTTTCACCCAACCAAAGAATTCTCTTCATCATCTCCATATGCTATTGTTTTTCTTTGTTTACATTCATTAGACAAATATCTTGTTTGGCTACAGTTAGAACACTTTCTCATTATGAGCCCGTTATTCAAATTTTGAGTTCTCTTATTCACTCGAATTTTGAAAGAATGGCCATATTTTGGTTGTTTTTTGCCTACGAAGTGTTCCAAGGATTTTTTCTTGCATTCTTCTTGGAGTGAACTTTGTTCAATTCGTCCATTCTTTTAGCACAAATAATTCCATCAACTAACAATTGAAAATGTCGTAGTTTTACCTTTTTTGATGTCCACCTACATGCCACCAATGAATCTTGCAATTAAGTGTTCCTCATTCTCCACCTAATTTGTTCTTGCTTCCAATCGGTGGAATTCTTCAATGTAATTAGCTATGGATCATAGGCCATGTCCACAATTTTAATATTGATTATAGTGTTTGTTCATAACTGGGTGGGTGTAACGCTCCTTCATCAAACACTTCATCTTTTTCCAAAAACGGATTGGTTTCTTGCCTCTACTATTGACCTCCTTAGTTTTAAGGCCACCGGTTGCCCCTTTTTATGCTCAAAGTTATTCATATATTATAATATGCAAAGAAATTATCGGTGTTCTTTATCCAAGAATACTTCAATATCACATTTCCCACTATGAAGTGGCAAATCTATCTTCATCTTGTAATCATAATGATCTTCTCTTGCCACATGTTGATTGTCTTGTCTTCTATAATTAACAAAGTCATTTTCTTGATCTTCCTCACTTGAAGAATCTCATTCTTGAAATTGTTGGTATCATTCTTGAAAATTTGGTCGAGGTTCTTGGCGTTCTTGGAACTGGAACTGTCTTTGGCGAAAATGACTACTTTTTTACCTCTTTCTTCAATGGTTTCTTGCTGATTTTGAACATGCCTCAGCTGCCCATGCCACACCTACCTTTCTTCCTCCATTCTTGAATTGGTTCTTTTGGCATTATTGGGGTGTTTGGCTCGTGGCTTTGGAATTAGGGGGTTTGGCATTTGAAGCCAAACCCATGTTTGTTCCCTTGGAATAAAATTCCTGGGATTAAGGGGTTTGGAATATGTTTTTTTTATAATTATTTAATGTCATATGTTTTAGAAAAAATTTCACTTCAACGTCTTATCAATGATCGTTGGCAACAATTGTTAGCCAACTTCATGATCAACCACGATGATCAACCACGATCGATCGACGGTCACAACAACCGATTGTTTTACTCGTTGGCTCCAGATTGTCATTGTAGATCGTCCTGATCGTTGATTATCAATGAACATCTTGATTGACGACAACCAATCGTTATCATTAATTATCGATCTCATGCCTATTAACAAACGATCTTACTGATGGTAAATGGTCAATAGCCATAACCCTTGACGATCGATTGCCATGATGGTCGATGACCAACCAATTGTCTTAAAATTGACAACTGTTGATCAATGACCGTCTTCACCAAGGCTTCCTACACTCTTTCTCATGGGATTGAATAGTAAACACTATTCAAGCCCATGGATTACTTTTTTTTCTAATTCAATCTAGAAAATCATCAACTACAAACACCACCCTAGTGACCATTGTCAGTCGACCACTAGGTGTCATTTCTGACAAACTCGGTTGACGAACTTTCGACCACCACTTTTCCAACTTTTGCAAACCATGAAAAATTAATAAAAATAAATTTTTGAAAAACTTTTTTTTTCTGAGTCATTCCATATATGTCTTTGATTTAATCACAATAATATTATATAAAATACTTATTTTTTCATTCTTCTATTTTCTTTTCTTATGGAGTTTTTTTATAACTATTATTATTAGATCATTTTTTTTAATGATCTCTTTTCTATTTTTTATTTAAAATTAATCTTTCCTTCATTTTAGAAGATTTTGTTTATTTTGTTATATTTTTTCATGAAAATTGATGACCTATCTATTGTGATCTCGAGTATAAATTAAATATTAGTATATTGATAATATAGTGAAAATTTTAAATAAATTAAATATTTTTAGTTTAATAACATTTTTCATTTTTTTCATTAGTCAATTTAACTAAAAGACTCCAGACTTACTTGAATTGACTTATTTTTATTTAGACCTCTTTTGATGAAGTATTTTTAGATACATTACATGTGTGTCATAAAAAGAAAACCATAACTATAGTTAAACATAACTCTATTTGATTTTCACTTTTGAATGATCCTTTTGGTTATGCTTATTTTATTATTTTGAAACATATTAGACCATTTTTAATGTTGCTTAACTAGAACTTTTGTAAACTCCATCTGATTACATAATTTGTTATATTTTGTGAATGGTTTGTAATATTCCTACTTAGATCATTCATGTTAATGCATGTGTAATCAAAATTATTGTTATCTAATTTTGAAATTTTTTGTTTTTACATTATTGTTATTAAAATCAATAGAGTCAATAAATTAAATTAGAGGTACAAAATATAAAAAAAATCAATTAAAAATTTGATACAAAATAAATTTAGGACGTAAAATTAATAAAAATAACTAAACAAATTAACTAAACCTAGGAATTCAAAATCAGCACCCCAAACACCATCATCAGAAAATTCAGATTTCCAAATACTGGCATTTATAATACCTAGGCATTAGAGTCCCATCAAATAAGTTCACAGGCATTTACTTTTCAGACATTTGATTTCGAACCTGCGTGTCAAACATCTGGATGATTCCCAGCAATTGGGTTTGCTACTTGCAAGCTTACACTTGTTCTGGGATAGAGGACAAGTGTTTTTTTTGCCTCTTGGTTTCACGTGCATAGATCCCCAGCAATTGGGTTTGCTACCCTTTTTCTGGTCATAGTCTGAGGGTTCTTGGAGCTCTATTACCAATTTGGTCTAAAACCAAGAGTACTTCTGAATGAATAATATTCTCCAGCTCTCAATGAGCGGAGATGGCCTTTATTTATCGGGGAAAAGTGGTTTCAGGTTTGTAATTAATGCTAACAATTCAAAATAACAGACCAACTTATTTTATCAACTATCTGACTCACTCACTCTTAGCTAGTTTACAAAAGCACCTCATGGTAGAGGAAGGCTATTACTAATGGCTGGGGGCTTTAGTGTTAATTCTACCATCATTTTGTTTTAGCATTTTCTTCCCGTTCTTCGTGGAAGATGCAATTCTGTTTATTGCTTTTGTATTTACATTTTTAAGCACAACACTAATATTTTTCTCTGCCTTCTCTTCAGACGTTGTGTCAATTCCCAAAACAAGTGAGAATTTCCGGCTTCTTTATGACACAAAAGGCCGATTTCGTTTACACTCAGTTAGGGATGAGGAGGCCAAGGTTAGCTACTGTCCTTTTGATGTTGAAATTTGACCTATTTGTTACAATCTTGTTGTATAAAGTATTCTAGTTTCAAAGTAAAATAGATGCAATTACAAAGTTTTTGGCATCAATTGTTCATGAATCATAAGGGAGAGATTTAGCTCTTTCTCCAGTTGGGGAGACATTCTACCTTTTCAAATTATTATCATGTGACGTTAGTGTAGGGAAGTATTTCAATATCTTATAACCCTCTGGAGTAGTAACAGGCTGGGCGCTGGACACCGTTTGTGGTTCATGATATAATTGGACGATTTAAGCTTGACTTTCATATTACTTTTTGCAGTATAAGCTGTGCAAAGTTCGCTCTGTACAGTTTGGGCAAAAGGGCATCCCTTATCTGAACACCTACGATGGACGCACAATCCGTTATCCTGACCCTTTAATCAAGGCGAATGACACCATCAAGCTGGACCTCGAGTCCAACAAGATTGCAGATTTCATCAAGTTCGATGTAGGAAATGTTGTGATGGTTACCGGTGGAAGAAACAGAGGCAGGGTTGGAGTGATAAAGAATAGGGAGAAGCATAAGGGAAGCTTTGAAACAATCCACATTCAGGATGCAACTGGGCACGAATTTGCTACTCGGCTGGGCAATGTGTTCACAGTTGGCAAGGGGACTAAGCCGTGGGTGTCCCTACCTAAGGGCAAGGGTATTAAATTATCCATCATCGAAGAAGCCAGGAAGAGGCTGGCAAGCCAAGCCGCAGTTACTGCTTGAGATTTAGTGTAGTGTAGTCATTGATGAAAGGTGGGATTTTGCTCTTGTTAGTTTTGTTTTTCTTGGTTTTTTTTTTGGTTAAGTAGATCTAAAAAAGGTTGATACTTTGTTATTTCTACTACAATTATGCAAGGCTACTGCTACTGCTACAATCTTTGTCATTCCAGAACTATTTGCTATAATGAACA

mRNA sequence

TTGAAGGCACGTGCTCGACAATTACTTAAATACAAAATTCCTCTTCTCCTTTTCGTCTCTGAGAGAACCCTAGCATCTTCCACAAACGCCACGCCGCTGCTTCCTCCCCACAGCTGCCGACTCTAGTTTAGCTCCGAAATATGGCAAGGGGACTGAAGAAGCATTTAAAGAGGCTCAATGCTCCGAAGCATTGGATGCTTGACAAGCTTGGTGGTGCATTTGCCCCCAAACCTTCATCTGGACCTCACAAGTCGAGGGAATGCCTCCCTTTGATCCTTATATTGAGAAACCGACTCAAATATGCCCTCACGTACCGTGAGGTAATTGCAATATTAATGCAACGACATGTTTTGGTCGATGGGAAGGTTAGGACAGACAAGACTTTCCCTGCTGGTTTCATGGACGTTGTGTCAATTCCCAAAACAAGTGAGAATTTCCGGCTTCTTTATGACACAAAAGGCCGATTTCGTTTACACTCAGTTAGGGATGAGGAGGCCAAGTATAAGCTGTGCAAAGTTCGCTCTGTACAGTTTGGGCAAAAGGGCATCCCTTATCTGAACACCTACGATGGACGCACAATCCGTTATCCTGACCCTTTAATCAAGGCGAATGACACCATCAAGCTGGACCTCGAGTCCAACAAGATTGCAGATTTCATCAAGTTCGATGTAGGAAATGTTGTGATGGTTACCGGTGGAAGAAACAGAGGCAGGGTTGGAGTGATAAAGAATAGGGAGAAGCATAAGGGAAGCTTTGAAACAATCCACATTCAGGATGCAACTGGGCACGAATTTGCTACTCGGCTGGGCAATGTGTTCACAGTTGGCAAGGGGACTAAGCCGTGGGTGTCCCTACCTAAGGGCAAGGGTATTAAATTATCCATCATCGAAGAAGCCAGGAAGAGGCTGGCAAGCCAAGCCGCAGTTACTGCTTGAGATTTAGTGTAGTGTAGTCATTGATGAAAGGTGGGATTTTGCTCTTGTTAGTTTTGTTTTTCTTGGTTTTTTTTTTGGTTAAGTAGATCTAAAAAAGGTTGATACTTTGTTATTTCTACTACAATTATGCAAGGCTACTGCTACTGCTACAATCTTTGTCATTCCAGAACTATTTGCTATAATGAACA

Coding sequence (CDS)

ATGGCAAGGGGACTGAAGAAGCATTTAAAGAGGCTCAATGCTCCGAAGCATTGGATGCTTGACAAGCTTGGTGGTGCATTTGCCCCCAAACCTTCATCTGGACCTCACAAGTCGAGGGAATGCCTCCCTTTGATCCTTATATTGAGAAACCGACTCAAATATGCCCTCACGTACCGTGAGGTAATTGCAATATTAATGCAACGACATGTTTTGGTCGATGGGAAGGTTAGGACAGACAAGACTTTCCCTGCTGGTTTCATGGACGTTGTGTCAATTCCCAAAACAAGTGAGAATTTCCGGCTTCTTTATGACACAAAAGGCCGATTTCGTTTACACTCAGTTAGGGATGAGGAGGCCAAGTATAAGCTGTGCAAAGTTCGCTCTGTACAGTTTGGGCAAAAGGGCATCCCTTATCTGAACACCTACGATGGACGCACAATCCGTTATCCTGACCCTTTAATCAAGGCGAATGACACCATCAAGCTGGACCTCGAGTCCAACAAGATTGCAGATTTCATCAAGTTCGATGTAGGAAATGTTGTGATGGTTACCGGTGGAAGAAACAGAGGCAGGGTTGGAGTGATAAAGAATAGGGAGAAGCATAAGGGAAGCTTTGAAACAATCCACATTCAGGATGCAACTGGGCACGAATTTGCTACTCGGCTGGGCAATGTGTTCACAGTTGGCAAGGGGACTAAGCCGTGGGTGTCCCTACCTAAGGGCAAGGGTATTAAATTATCCATCATCGAAGAAGCCAGGAAGAGGCTGGCAAGCCAAGCCGCAGTTACTGCTTGA

Protein sequence

MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAAVTA*

Homology

[Close]

BLAST of CSPI07G12100 vs. ExPASy Swiss-Prot
Match: Q8VYK6 (40S ribosomal protein S4-3 OS=Arabidopsis thaliana OX=3702 GN=RPS4D PE=2 SV=2)

HSP 1 Score: 505.4 bits (1300), Expect = 4.0e-142
Identity = 241/261 (92.34%), Postives = 257/261 (98.47%), Query Frame = 0


Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAK 120
           VI+ILMQRH+ VDGKVRTDKT+PAGFMDVVSIPKT+ENFRLLYDTKGRFRLHS++DEEAK
Sbjct: 61  VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120

Query: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           +KLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDLE+NKI +FIKFDVGNV
Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEANKIVEFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQD+TGHEFATRLGNV+T+GKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPK 240

Query: 241 GKGIKLSIIEEARKRLASQAA 262
           GKGIKL+IIEEARKRLASQ A
Sbjct: 241 GKGIKLTIIEEARKRLASQQA 261

[Close]

BLAST of CSPI07G12100 vs. ExPASy Swiss-Prot
Match: P49204 (40S ribosomal protein S4-2 OS=Arabidopsis thaliana OX=3702 GN=RPS4B PE=2 SV=4)

HSP 1 Score: 505.0 bits (1299), Expect = 5.2e-142
Identity = 241/261 (92.34%), Postives = 256/261 (98.08%), Query Frame = 0


Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAK 120
           VI+ILMQRH+ VDGKVRTDKT+PAGFMDVVSIPKT+ENFRLLYDTKGRFRLHS++DEEAK
Sbjct: 61  VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120

Query: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           +KLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDLE NKI +FIKFDVGNV
Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQD+TGHEFATRLGNV+T+GKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPK 240

Query: 241 GKGIKLSIIEEARKRLASQAA 262
           GKGIKL+IIEEARKRLASQ A
Sbjct: 241 GKGIKLTIIEEARKRLASQQA 261

[Close]

BLAST of CSPI07G12100 vs. ExPASy Swiss-Prot
Match: P46300 (40S ribosomal protein S4 OS=Solanum tuberosum OX=4113 GN=RPS4 PE=2 SV=1)

HSP 1 Score: 504.2 bits (1297), Expect = 8.9e-142
Identity = 242/264 (91.67%), Postives = 259/264 (98.11%), Query Frame = 0


Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL++I+RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVIIMRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAK 120
           VI+ILMQR V+VDGKVRTDKT+PAGFMDVVSIPKT+ENFRLLYDTKGRFRLHS+RDEE+K
Sbjct: 61  VISILMQRQVMVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEESK 120

Query: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           +KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKI DFIKFDVGNV
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIVDFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFET+HIQD+ GHEFATRLGNVFT+GKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETLHIQDSQGHEFATRLGNVFTLGKGTKPWVSLPK 240

Query: 241 GKGIKLSIIEEARKRLASQAAVTA 265
           GKGIKL+IIE+ARKRLA+Q+A  A
Sbjct: 241 GKGIKLTIIEDARKRLAAQSATPA 264

[Close]

BLAST of CSPI07G12100 vs. ExPASy Swiss-Prot
Match: Q93VH9 (40S ribosomal protein S4-1 OS=Arabidopsis thaliana OX=3702 GN=RPS4A PE=2 SV=1)

HSP 1 Score: 502.7 bits (1293), Expect = 2.6e-141
Identity = 239/261 (91.57%), Postives = 256/261 (98.08%), Query Frame = 0


Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAK 120
           VI+ILMQRH+ VDGKVRTDKT+PAGFMDVVSIPKT+ENFRLLYDTKGRFRLHS++DEEAK
Sbjct: 61  VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120

Query: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           +KLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDLE NKI +FIKFDVGNV
Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQD+TGHEFATRLGNV+T+GKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPK 240

Query: 241 GKGIKLSIIEEARKRLASQAA 262
           GKGIKL+IIEEARKRL++Q A
Sbjct: 241 GKGIKLTIIEEARKRLSAQQA 261

[Close]

BLAST of CSPI07G12100 vs. ExPASy Swiss-Prot
Match: P46299 (40S ribosomal protein S4 OS=Gossypium hirsutum OX=3635 GN=RPS4 PE=2 SV=1)

HSP 1 Score: 497.3 bits (1279), Expect = 1.1e-139
Identity = 241/261 (92.34%), Postives = 253/261 (96.93%), Query Frame = 0


Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAP+HWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAK 120
           VIAILMQRHV+VDGKVRTDKT+PAGFMDVVSIPKT+E+FRLLYDTKGRF LH++  +E K
Sbjct: 61  VIAILMQRHVMVDGKVRTDKTYPAGFMDVVSIPKTNEDFRLLYDTKGRFCLHAITGDETK 120

Query: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           +KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKI DFIKFDVGNV
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIVDFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIH+QDA GHEFATRLGNVFT+GKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHVQDAAGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 241 GKGIKLSIIEEARKRLASQAA 262
            KGIKLSIIEEARKRLA+Q A
Sbjct: 241 RKGIKLSIIEEARKRLAAQNA 261

[Close]

BLAST of CSPI07G12100 vs. ExPASy TrEMBL
Match: A0A0A0K4K7 (40S ribosomal protein S4 OS=Cucumis sativus OX=3659 GN=Csa_7G282410 PE=3 SV=1)

HSP 1 Score: 532.7 bits (1371), Expect = 8.6e-148
Identity = 264/264 (100.00%), Postives = 264/264 (100.00%), Query Frame = 0


Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAK 120
           VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAK
Sbjct: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAK 120

Query: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV
Sbjct: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPK 240

Query: 241 GKGIKLSIIEEARKRLASQAAVTA 265
           GKGIKLSIIEEARKRLASQAAVTA
Sbjct: 241 GKGIKLSIIEEARKRLASQAAVTA 264

[Close]

BLAST of CSPI07G12100 vs. ExPASy TrEMBL
Match: A0A1S3CEH5 (40S ribosomal protein S4 OS=Cucumis melo OX=3656 GN=LOC103500053 PE=3 SV=1)

HSP 1 Score: 531.2 bits (1367), Expect = 2.5e-147
Identity = 262/264 (99.24%), Postives = 264/264 (100.00%), Query Frame = 0


Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAK 120
           VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAK
Sbjct: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAK 120

Query: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV
Sbjct: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFT+GKGTKPWVS+PK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSVPK 240

Query: 241 GKGIKLSIIEEARKRLASQAAVTA 265
           GKGIKLSIIEEARKRLASQAAVTA
Sbjct: 241 GKGIKLSIIEEARKRLASQAAVTA 264

[Close]

BLAST of CSPI07G12100 vs. ExPASy TrEMBL
Match: A0A5A7V1R9 (40S ribosomal protein S4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold39G00160 PE=3 SV=1)

HSP 1 Score: 530.8 bits (1366), Expect = 3.3e-147
Identity = 262/263 (99.62%), Postives = 263/263 (100.00%), Query Frame = 0


Query: 2   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV
Sbjct: 16  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 75

Query: 62  IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAKY 121
           IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAKY
Sbjct: 76  IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAKY 135

Query: 122 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVV 181
           KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVV
Sbjct: 136 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVV 195

Query: 182 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPKG 241
           MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFT+GKGTKPWVSLPKG
Sbjct: 196 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 255

Query: 242 KGIKLSIIEEARKRLASQAAVTA 265
           KGIKLSIIEEARKRLASQAAVTA
Sbjct: 256 KGIKLSIIEEARKRLASQAAVTA 278

[Close]

BLAST of CSPI07G12100 vs. ExPASy TrEMBL
Match: A0A6J1BSY6 (40S ribosomal protein S4 OS=Momordica charantia OX=3673 GN=LOC111005064 PE=3 SV=1)

HSP 1 Score: 528.9 bits (1361), Expect = 1.2e-146
Identity = 260/264 (98.48%), Postives = 264/264 (100.00%), Query Frame = 0


Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAK 120
           VIAILMQRHVLVDGKVRTDKT+PAGFMDVVSIPKT+ENFRLLYDTKGRFRLHSVRDEEAK
Sbjct: 61  VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 120

Query: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDL+SNKIADFIKFDVGNV
Sbjct: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFT+GKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 241 GKGIKLSIIEEARKRLASQAAVTA 265
           GKGIKLSIIEEARKRLASQAAVTA
Sbjct: 241 GKGIKLSIIEEARKRLASQAAVTA 264

[Close]

BLAST of CSPI07G12100 vs. ExPASy TrEMBL
Match: A0A5A7UAW2 (40S ribosomal protein S4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold33G00150 PE=3 SV=1)

HSP 1 Score: 528.1 bits (1359), Expect = 2.1e-146
Identity = 259/264 (98.11%), Postives = 264/264 (100.00%), Query Frame = 0


Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAK 120
           VIAILMQRHVLVDGKVRTDKTFPAGFMD++SIPKT+ENFRLLYDTKGRFRLHSVRDEEAK
Sbjct: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDILSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 120

Query: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           YKLCKVRSVQFGQKGIPYLNT+DGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV
Sbjct: 121 YKLCKVRSVQFGQKGIPYLNTFDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFT+GKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 241 GKGIKLSIIEEARKRLASQAAVTA 265
           GKGIKLSIIEEARKRLASQAAVTA
Sbjct: 241 GKGIKLSIIEEARKRLASQAAVTA 264

[Close]

BLAST of CSPI07G12100 vs. NCBI nr
Match: XP_004150397.1 (40S ribosomal protein S4-3 [Cucumis sativus] >KGN44413.1 hypothetical protein Csa_016474 [Cucumis sativus])

HSP 1 Score: 532.7 bits (1371), Expect = 1.8e-147
Identity = 264/264 (100.00%), Postives = 264/264 (100.00%), Query Frame = 0


Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAK 120
           VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAK
Sbjct: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAK 120

Query: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV
Sbjct: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPK 240

Query: 241 GKGIKLSIIEEARKRLASQAAVTA 265
           GKGIKLSIIEEARKRLASQAAVTA
Sbjct: 241 GKGIKLSIIEEARKRLASQAAVTA 264

[Close]

BLAST of CSPI07G12100 vs. NCBI nr
Match: XP_038900121.1 (40S ribosomal protein S4-3 [Benincasa hispida])

HSP 1 Score: 531.2 bits (1367), Expect = 5.2e-147
Identity = 262/264 (99.24%), Postives = 264/264 (100.00%), Query Frame = 0


Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAK 120
           VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKT+ENFRLLYDTKGRFRLHSVRDEEAK
Sbjct: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 120

Query: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV
Sbjct: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFT+GKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 241 GKGIKLSIIEEARKRLASQAAVTA 265
           GKGIKLSIIEEARKRLASQAAVTA
Sbjct: 241 GKGIKLSIIEEARKRLASQAAVTA 264

[Close]

BLAST of CSPI07G12100 vs. NCBI nr
Match: XP_008461463.1 (PREDICTED: 40S ribosomal protein S4-3-like [Cucumis melo])

HSP 1 Score: 531.2 bits (1367), Expect = 5.2e-147
Identity = 262/264 (99.24%), Postives = 264/264 (100.00%), Query Frame = 0


Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAK 120
           VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAK
Sbjct: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAK 120

Query: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV
Sbjct: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFT+GKGTKPWVS+PK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSVPK 240

Query: 241 GKGIKLSIIEEARKRLASQAAVTA 265
           GKGIKLSIIEEARKRLASQAAVTA
Sbjct: 241 GKGIKLSIIEEARKRLASQAAVTA 264

[Close]

BLAST of CSPI07G12100 vs. NCBI nr
Match: KAA0061270.1 (40S ribosomal protein S4-3-like [Cucumis melo var. makuwa] >TYK09850.1 40S ribosomal protein S4-3-like [Cucumis melo var. makuwa])

HSP 1 Score: 530.8 bits (1366), Expect = 6.8e-147
Identity = 262/263 (99.62%), Postives = 263/263 (100.00%), Query Frame = 0


Query: 2   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV
Sbjct: 16  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 75

Query: 62  IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAKY 121
           IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAKY
Sbjct: 76  IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAKY 135

Query: 122 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVV 181
           KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVV
Sbjct: 136 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVV 195

Query: 182 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPKG 241
           MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFT+GKGTKPWVSLPKG
Sbjct: 196 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 255

Query: 242 KGIKLSIIEEARKRLASQAAVTA 265
           KGIKLSIIEEARKRLASQAAVTA
Sbjct: 256 KGIKLSIIEEARKRLASQAAVTA 278

[Close]

BLAST of CSPI07G12100 vs. NCBI nr
Match: XP_038899765.1 (40S ribosomal protein S4-3-like [Benincasa hispida])

HSP 1 Score: 530.0 bits (1364), Expect = 1.2e-146
Identity = 261/264 (98.86%), Postives = 264/264 (100.00%), Query Frame = 0


Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAK 120
           VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKT+ENFRLLYDTKGRFRLHSVRDEEAK
Sbjct: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 120

Query: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDL+SNKIADFIKFDVGNV
Sbjct: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFT+GKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 241 GKGIKLSIIEEARKRLASQAAVTA 265
           GKGIKLSIIEEARKRLASQAAVTA
Sbjct: 241 GKGIKLSIIEEARKRLASQAAVTA 264

[Close]

BLAST of CSPI07G12100 vs. TAIR 10
Match: AT5G58420.1 (Ribosomal protein S4 (RPS4A) family protein )

HSP 1 Score: 505.4 bits (1300), Expect = 2.8e-143
Identity = 241/261 (92.34%), Postives = 257/261 (98.47%), Query Frame = 0


Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAK 120
           VI+ILMQRH+ VDGKVRTDKT+PAGFMDVVSIPKT+ENFRLLYDTKGRFRLHS++DEEAK
Sbjct: 61  VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120

Query: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           +KLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDLE+NKI +FIKFDVGNV
Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEANKIVEFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQD+TGHEFATRLGNV+T+GKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPK 240

Query: 241 GKGIKLSIIEEARKRLASQAA 262
           GKGIKL+IIEEARKRLASQ A
Sbjct: 241 GKGIKLTIIEEARKRLASQQA 261

[Close]

BLAST of CSPI07G12100 vs. TAIR 10
Match: AT5G07090.1 (Ribosomal protein S4 (RPS4A) family protein )

HSP 1 Score: 505.0 bits (1299), Expect = 3.7e-143
Identity = 241/261 (92.34%), Postives = 256/261 (98.08%), Query Frame = 0


Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAK 120
           VI+ILMQRH+ VDGKVRTDKT+PAGFMDVVSIPKT+ENFRLLYDTKGRFRLHS++DEEAK
Sbjct: 61  VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120

Query: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           +KLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDLE NKI +FIKFDVGNV
Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQD+TGHEFATRLGNV+T+GKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPK 240

Query: 241 GKGIKLSIIEEARKRLASQAA 262
           GKGIKL+IIEEARKRLASQ A
Sbjct: 241 GKGIKLTIIEEARKRLASQQA 261

[Close]

BLAST of CSPI07G12100 vs. TAIR 10
Match: AT2G17360.1 (Ribosomal protein S4 (RPS4A) family protein )

HSP 1 Score: 502.7 bits (1293), Expect = 1.8e-142
Identity = 239/261 (91.57%), Postives = 256/261 (98.08%), Query Frame = 0


Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAK 120
           VI+ILMQRH+ VDGKVRTDKT+PAGFMDVVSIPKT+ENFRLLYDTKGRFRLHS++DEEAK
Sbjct: 61  VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120

Query: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           +KLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDLE NKI +FIKFDVGNV
Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQD+TGHEFATRLGNV+T+GKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPK 240

Query: 241 GKGIKLSIIEEARKRLASQAA 262
           GKGIKL+IIEEARKRL++Q A
Sbjct: 241 GKGIKLTIIEEARKRLSAQQA 261

[Close]

BLAST of CSPI07G12100 vs. TAIR 10
Match: AT5G07090.2 (Ribosomal protein S4 (RPS4A) family protein )

HSP 1 Score: 466.5 bits (1199), Expect = 1.5e-131
Identity = 223/243 (91.77%), Postives = 238/243 (97.94%), Query Frame = 0


Query: 19  MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRT 78
           MLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREVI+ILMQRH+ VDGKVRT
Sbjct: 1   MLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREVISILMQRHIQVDGKVRT 60

Query: 79  DKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPY 138
           DKT+PAGFMDVVSIPKT+ENFRLLYDTKGRFRLHS++DEEAK+KLCKVRS+QFGQKGIPY
Sbjct: 61  DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCKVRSIQFGQKGIPY 120

Query: 139 LNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNR 198
           LNTYDGRTIRYPDPLIK NDTIKLDLE NKI +FIKFDVGNVVMVTGGRNRGRVGVIKNR
Sbjct: 121 LNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVVMVTGGRNRGRVGVIKNR 180

Query: 199 EKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLAS 258
           EKHKGSFETIHIQD+TGHEFATRLGNV+T+GKGTKPWVSLPKGKGIKL+IIEEARKRLAS
Sbjct: 181 EKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKGKGIKLTIIEEARKRLAS 240

Query: 259 QAA 262
           Q A
Sbjct: 241 QQA 243

[Close]

BLAST of CSPI07G12100 vs. TAIR 10
Match: AT2G17360.2 (Ribosomal protein S4 (RPS4A) family protein )

HSP 1 Score: 348.6 bits (893), Expect = 4.4e-96
Identity = 164/181 (90.61%), Postives = 175/181 (96.69%), Query Frame = 0


Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAK 120
           VI+ILMQRH+ VDGKVRTDKT+PAGFMDVVSIPKT+ENFRLLYDTKGRFRLHS++DEEAK
Sbjct: 61  VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120

Query: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           +KLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDLE NKI +FIKFDVG  
Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGKC 180

Query: 181 V 182
           V
Sbjct: 181 V 181

The following BLAST results are available for this feature:

BLAST of CSPI07G12100 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VYK6	4.0e-142	92.34	40S ribosomal protein S4-3 OS=Arabidopsis thaliana OX=3702 GN=RPS4D PE=2 SV=2	[more]
P49204	5.2e-142	92.34	40S ribosomal protein S4-2 OS=Arabidopsis thaliana OX=3702 GN=RPS4B PE=2 SV=4	[more]
P46300	8.9e-142	91.67	40S ribosomal protein S4 OS=Solanum tuberosum OX=4113 GN=RPS4 PE=2 SV=1	[more]
Q93VH9	2.6e-141	91.57	40S ribosomal protein S4-1 OS=Arabidopsis thaliana OX=3702 GN=RPS4A PE=2 SV=1	[more]
P46299	1.1e-139	92.34	40S ribosomal protein S4 OS=Gossypium hirsutum OX=3635 GN=RPS4 PE=2 SV=1	[more]

BLAST of CSPI07G12100 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K4K7	8.6e-148	100.00	40S ribosomal protein S4 OS=Cucumis sativus OX=3659 GN=Csa_7G282410 PE=3 SV=1	[more]
A0A1S3CEH5	2.5e-147	99.24	40S ribosomal protein S4 OS=Cucumis melo OX=3656 GN=LOC103500053 PE=3 SV=1	[more]
A0A5A7V1R9	3.3e-147	99.62	40S ribosomal protein S4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A6J1BSY6	1.2e-146	98.48	40S ribosomal protein S4 OS=Momordica charantia OX=3673 GN=LOC111005064 PE=3 SV=...	[more]
A0A5A7UAW2	2.1e-146	98.11	40S ribosomal protein S4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]

BLAST of CSPI07G12100 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150397.1	1.8e-147	100.00	40S ribosomal protein S4-3 [Cucumis sativus] >KGN44413.1 hypothetical protein Cs...	[more]
XP_038900121.1	5.2e-147	99.24	40S ribosomal protein S4-3 [Benincasa hispida]	[more]
XP_008461463.1	5.2e-147	99.24	PREDICTED: 40S ribosomal protein S4-3-like [Cucumis melo]	[more]
KAA0061270.1	6.8e-147	99.62	40S ribosomal protein S4-3-like [Cucumis melo var. makuwa] >TYK09850.1 40S ribos...	[more]
XP_038899765.1	1.2e-146	98.86	40S ribosomal protein S4-3-like [Benincasa hispida]	[more]

BLAST of CSPI07G12100 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G58420.1	2.8e-143	92.34	Ribosomal protein S4 (RPS4A) family protein	[more]
AT5G07090.1	3.7e-143	92.34	Ribosomal protein S4 (RPS4A) family protein	[more]
AT2G17360.1	1.8e-142	91.57	Ribosomal protein S4 (RPS4A) family protein	[more]
AT5G07090.2	1.5e-131	91.77	Ribosomal protein S4 (RPS4A) family protein	[more]
AT2G17360.2	4.4e-96	90.61	Ribosomal protein S4 (RPS4A) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002942	RNA-binding S4 domain	SMART	SM00363	s4_6	coord: 42..106 e-value: 2.7E-4 score: 30.3
IPR002942	RNA-binding S4 domain	PFAM	PF01479	S4	coord: 47..90 e-value: 8.0E-7 score: 28.7
IPR002942	RNA-binding S4 domain	CDD	cd00165	S4	coord: 51..112 e-value: 3.75305E-6 score: 41.8514
IPR005824	KOW	SMART	SM00739	kow_9	coord: 174..201 e-value: 7.7E-4 score: 28.8
IPR005824	KOW	PFAM	PF00467	KOW	coord: 177..210 e-value: 1.4E-6 score: 28.1
IPR036986	RNA-binding S4 domain superfamily	GENE3D	3.10.290.10		coord: 1..117 e-value: 4.6E-61 score: 206.0
IPR000876	Ribosomal protein S4e	PIRSF	PIRSF002116	RPS4a_RPS4e	coord: 1..241 e-value: 2.6E-97 score: 322.7
IPR000876	Ribosomal protein S4e	PANTHER	PTHR11581	30S/40S RIBOSOMAL PROTEIN S4	coord: 221..264
IPR000876	Ribosomal protein S4e	PANTHER	PTHR11581	30S/40S RIBOSOMAL PROTEIN S4	coord: 2..220
IPR000876	Ribosomal protein S4e	HAMAP	MF_00485	Ribosomal_S4e	coord: 7..238 score: 36.502556
IPR038237	Ribosomal protein S4e, central domain superfamily	GENE3D	2.40.50.740		coord: 122..172 e-value: 2.3E-31 score: 109.3
IPR032277	40S ribosomal protein S4, C-terminal domain	PFAM	PF16121	40S_S4_C	coord: 212..258 e-value: 2.6E-25 score: 87.8
IPR013845	Ribosomal protein S4e, central region	PFAM	PF00900	Ribosomal_S4e	coord: 95..169 e-value: 3.6E-35 score: 119.7
IPR014722	Ribosomal protein L2, domain 2	GENE3D	2.30.30.30		coord: 175..245 e-value: 5.9E-39 score: 133.8
IPR013843	Ribosomal protein S4e, N-terminal	PFAM	PF08071	RS4NT	coord: 3..39 e-value: 4.1E-19 score: 68.4
None	No IPR available	PANTHER	PTHR11581:SF33	40S RIBOSOMAL PROTEIN S4	coord: 221..264
None	No IPR available	PANTHER	PTHR11581:SF33	40S RIBOSOMAL PROTEIN S4	coord: 2..220
None	No IPR available	PROSITE	PS50889	S4	coord: 42..104 score: 8.993423
IPR018199	Ribosomal protein S4e, N-terminal, conserved site	PROSITE	PS00528	RIBOSOMAL_S4E	coord: 8..22
IPR041982	Ribosomal protein S4, KOW domain	CDD	cd06087	KOW_RPS4	coord: 175..229 e-value: 2.81816E-30 score: 105.675

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI07G12100.1	CSPI07G12100.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003723	RNA binding