CSPI07G11860 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI07G11860
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr7: 10095453 .. 10095767 (+)
RNA-Seq ExpressionCSPI07G11860
SyntenyCSPI07G11860
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTGCGCCGCTGAAGCCTTTCACAACGTCTGCGCCGCCCAAATATTCCACGACGTCTGCGTCGTCAAAGCTTTTCGCGACGTCTGCATCGCCACAAACTTTCGCAACGTCGGTGGCTCAAAATCCGTCTGCTACGTATTGGGATCGTGTGCGGGGGAAATACTTGACGACGTGGCAGCGAGCGGCGTCGCAGAAAGTATCCCCGACGGAATTTTACCGATGTGTCTGCCGACGTCGTTTGCGGTGTCTCGATAGCTTTTTGCGACGTTGTTTTTGTTTTCGGCGACGTGTCTGTGCGTCCGAAAAGAGCTAG

mRNA sequence

ATGTTTGCGCCGCTGAAGCCTTTCACAACGTCTGCGCCGCCCAAATATTCCACGACGTCTGCGTCGTCAAAGCTTTTCGCGACGTCTGCATCGCCACAAACTTTCGCAACGTCGGTGGCTCAAAATCCGTCTGCTACGTATTGGGATCGTGTGCGGGGGAAATACTTGACGACGTGGCAGCGAGCGGCGTCGCAGAAAGTATCCCCGACGGAATTTTACCGATGTGTCTGCCGACGTCGTTTGCGGTGTCTCGATAGCTTTTTGCGACGTTGTTTTTGTTTTCGGCGACGTGTCTGTGCGTCCGAAAAGAGCTAG

Coding sequence (CDS)

ATGTTTGCGCCGCTGAAGCCTTTCACAACGTCTGCGCCGCCCAAATATTCCACGACGTCTGCGTCGTCAAAGCTTTTCGCGACGTCTGCATCGCCACAAACTTTCGCAACGTCGGTGGCTCAAAATCCGTCTGCTACGTATTGGGATCGTGTGCGGGGGAAATACTTGACGACGTGGCAGCGAGCGGCGTCGCAGAAAGTATCCCCGACGGAATTTTACCGATGTGTCTGCCGACGTCGTTTGCGGTGTCTCGATAGCTTTTTGCGACGTTGTTTTTGTTTTCGGCGACGTGTCTGTGCGTCCGAAAAGAGCTAG

Protein sequence

MFAPLKPFTTSAPPKYSTTSASSKLFATSASPQTFATSVAQNPSATYWDRVRGKYLTTWQRAASQKVSPTEFYRCVCRRRLRCLDSFLRRCFCFRRRVCASEKS*
Homology
BLAST of CSPI07G11860 vs. ExPASy TrEMBL
Match: A0A0A0K4F6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G274670 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 1.8e-48
Identity = 101/104 (97.12%), Postives = 102/104 (98.08%), Query Frame = 0

Query: 1   MFAPLKPFTTSAPPKYSTTSASSKLFATSASPQTFATSVAQNPSATYWDRVRGKYLTTWQ 60
           MFAPLKPFTTSAP KYSTTSA SKLFATSASPQTFATSVAQNPSATYWDRVRGKYLTTWQ
Sbjct: 1   MFAPLKPFTTSAPSKYSTTSAPSKLFATSASPQTFATSVAQNPSATYWDRVRGKYLTTWQ 60

Query: 61  RAASQKVSPTEFYRCVCRRRLRCLDSFLRRCFCFRRRVCASEKS 105
           RAASQKVSPT+FYRCVCRRRLRCLDSFLRRCFCFRRRVCASEKS
Sbjct: 61  RAASQKVSPTDFYRCVCRRRLRCLDSFLRRCFCFRRRVCASEKS 104

BLAST of CSPI07G11860 vs. NCBI nr
Match: KGN44378.1 (hypothetical protein Csa_015604 [Cucumis sativus])

HSP 1 Score: 201.4 bits (511), Expect = 3.7e-48
Identity = 101/104 (97.12%), Postives = 102/104 (98.08%), Query Frame = 0

Query: 1   MFAPLKPFTTSAPPKYSTTSASSKLFATSASPQTFATSVAQNPSATYWDRVRGKYLTTWQ 60
           MFAPLKPFTTSAP KYSTTSA SKLFATSASPQTFATSVAQNPSATYWDRVRGKYLTTWQ
Sbjct: 1   MFAPLKPFTTSAPSKYSTTSAPSKLFATSASPQTFATSVAQNPSATYWDRVRGKYLTTWQ 60

Query: 61  RAASQKVSPTEFYRCVCRRRLRCLDSFLRRCFCFRRRVCASEKS 105
           RAASQKVSPT+FYRCVCRRRLRCLDSFLRRCFCFRRRVCASEKS
Sbjct: 61  RAASQKVSPTDFYRCVCRRRLRCLDSFLRRCFCFRRRVCASEKS 104

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0K4F61.8e-4897.12Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G274670 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KGN44378.13.7e-4897.12hypothetical protein Csa_015604 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G11860.1CSPI07G11860.1mRNA