CSPI07G11100 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI07G11100
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionAWS domain-containing protein
LocationChr7: 9250901 .. 9251509 (+)
RNA-Seq ExpressionCSPI07G11100
SyntenyCSPI07G11100
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTAAACCCGGAAGATCAGCAATACCTGCGAGAGCTGCAAGAGCTTAGCAATTCTCTTTTGCTCAACAAAGATAGAACGAATGATTTGGTAAACAGTAGCAACGCGGGTCTAATGGTGGCCATGCTAAACGACGACAACCTACAGTGCATTAGAAATTTACATGGCGTATTGCGTGATGCTGCTGCGATTGTTGGAACGGTGAATCAACTTACTCTACCGTTGGATAACTATAGAGCCATTATATTAGCTAGATACCGAGAACTTGAAAATCGAATATGGCGACTCATCAACCAAGGTTATCGAGTATTTGATATGCTTTATTTACAAATAATTTCATATACTGCTAATCAGTTGCTGAAAGCATACATTGTTGTAGAAAGTACCGTTTCTTATATCCGCATGAGACTTCAGTCAATATTATCGAATGCTATGGAGAGTGCTTCTCATTTAAAACAGGCAATGATTCAAGCGGAGGAGAGGAGGATTGCAGCGATTAAATGTAAATGTAGGACCAGCTGTGGAAACCGTTGTGGTTGTTGTAGGTTTGGAAAGCAATGCACAGATGCCTGCAGTTTCTGCCGAAACAGTAATTGTCAGAATAGATAA

mRNA sequence

ATGTTAAACCCGGAAGATCAGCAATACCTGCGAGAGCTGCAAGAGCTTAGCAATTCTCTTTTGCTCAACAAAGATAGAACGAATGATTTGGTAAACAGTAGCAACGCGGGTCTAATGGTGGCCATGCTAAACGACGACAACCTACAGTGCATTAGAAATTTACATGGCGTATTGCGTGATGCTGCTGCGATTGTTGGAACGGTGAATCAACTTACTCTACCGTTGGATAACTATAGAGCCATTATATTAGCTAGATACCGAGAACTTGAAAATCGAATATGGCGACTCATCAACCAAGGTTATCGAGTATTTGATATGCTTTATTTACAAATAATTTCATATACTGCTAATCAGTTGCTGAAAGCATACATTGTTGTAGAAAGTACCGTTTCTTATATCCGCATGAGACTTCAGTCAATATTATCGAATGCTATGGAGAGTGCTTCTCATTTAAAACAGGCAATGATTCAAGCGGAGGAGAGGAGGATTGCAGCGATTAAATGTAAATGTAGGACCAGCTGTGGAAACCGTTGTGGTTGTTGTAGGTTTGGAAAGCAATGCACAGATGCCTGCAGTTTCTGCCGAAACAGTAATTGTCAGAATAGATAA

Coding sequence (CDS)

ATGTTAAACCCGGAAGATCAGCAATACCTGCGAGAGCTGCAAGAGCTTAGCAATTCTCTTTTGCTCAACAAAGATAGAACGAATGATTTGGTAAACAGTAGCAACGCGGGTCTAATGGTGGCCATGCTAAACGACGACAACCTACAGTGCATTAGAAATTTACATGGCGTATTGCGTGATGCTGCTGCGATTGTTGGAACGGTGAATCAACTTACTCTACCGTTGGATAACTATAGAGCCATTATATTAGCTAGATACCGAGAACTTGAAAATCGAATATGGCGACTCATCAACCAAGGTTATCGAGTATTTGATATGCTTTATTTACAAATAATTTCATATACTGCTAATCAGTTGCTGAAAGCATACATTGTTGTAGAAAGTACCGTTTCTTATATCCGCATGAGACTTCAGTCAATATTATCGAATGCTATGGAGAGTGCTTCTCATTTAAAACAGGCAATGATTCAAGCGGAGGAGAGGAGGATTGCAGCGATTAAATGTAAATGTAGGACCAGCTGTGGAAACCGTTGTGGTTGTTGTAGGTTTGGAAAGCAATGCACAGATGCCTGCAGTTTCTGCCGAAACAGTAATTGTCAGAATAGATAA

Protein sequence

MLNPEDQQYLRELQELSNSLLLNKDRTNDLVNSSNAGLMVAMLNDDNLQCIRNLHGVLRDAAAIVGTVNQLTLPLDNYRAIILARYRELENRIWRLINQGYRVFDMLYLQIISYTANQLLKAYIVVESTVSYIRMRLQSILSNAMESASHLKQAMIQAEERRIAAIKCKCRTSCGNRCGCCRFGKQCTDACSFCRNSNCQNR*
Homology
[Close]
BLAST of CSPI07G11100 vs. ExPASy TrEMBL
Match: A0A0A0K5T2 (AWS domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G246640 PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 3.6e-77
Identity = 152/155 (98.06%), Postives = 153/155 (98.71%), Query Frame = 0 

Query: 48  LQCIRNLHGVLRDAAAIVGTVNQLTLPLDNYRAIILARYRELENRIWRLINQGYRVFDML 107
           LQCIRNLHGVLRDAAAIVGTVNQLTLPLDNYRAIILARYRELENRIWRLINQGYRVFDML
Sbjct: 34  LQCIRNLHGVLRDAAAIVGTVNQLTLPLDNYRAIILARYRELENRIWRLINQGYRVFDML 93

Query: 108 YLQIISYTANQLLKAYIVVESTVSYIRMRLQSILSNAMESASHLKQAMIQAEERRIAAIK 167
           YLQIISYTANQLLKAYIVVE+TVSYIRMRLQSILSNAMESASHLKQAMIQAEERRIAAIK
Sbjct: 94  YLQIISYTANQLLKAYIVVENTVSYIRMRLQSILSNAMESASHLKQAMIQAEERRIAAIK 153

Query: 168 CKCRTSCGNRCGCCRFGKQCTDACSFCRNSNCQNR 203
           CKCRT CGNRCGC RFGKQCTDACSFCRNSNCQNR
Sbjct: 154 CKCRTGCGNRCGCRRFGKQCTDACSFCRNSNCQNR 188

[Close]
BLAST of CSPI07G11100 vs. NCBI nr
Match: KAE8646116.1 (hypothetical protein Csa_016893 [Cucumis sativus])

HSP 1 Score: 375.9 bits (964), Expect = 2.1e-100
Identity = 194/197 (98.48%), Postives = 197/197 (100.00%), Query Frame = 0 

Query: 1   MLNPEDQQYLRELQELSNSLLLNKDRTNDLVNSSNAGLMVAMLNDDNLQCIRNLHGVLRD 60
           MLNPEDQQYLRELQELSNSLLL+KDRTNDLVNSSNAGLMVAMLNDDNLQCIRNLHGVLRD
Sbjct: 1   MLNPEDQQYLRELQELSNSLLLDKDRTNDLVNSSNAGLMVAMLNDDNLQCIRNLHGVLRD 60

Query: 61  AAAIVGTVNQLTLPLDNYRAIILARYRELENRIWRLINQGYRVFDMLYLQIISYTANQLL 120
           AAAIVGTVNQLTLPLDNYRAIILARYRELENRIWRLINQGYRVFDMLYLQIISYTANQLL
Sbjct: 61  AAAIVGTVNQLTLPLDNYRAIILARYRELENRIWRLINQGYRVFDMLYLQIISYTANQLL 120

Query: 121 KAYIVVESTVSYIRMRLQSILSNAMESASHLKQAMIQAEERRIAAIKCKCRTSCGNRCGC 180
           KAYIVVE+TVSYIRMRLQSILSNAMESASHLKQAMIQAEERRIAAIKCKCRTSCGNRCGC
Sbjct: 121 KAYIVVENTVSYIRMRLQSILSNAMESASHLKQAMIQAEERRIAAIKCKCRTSCGNRCGC 180

Query: 181 CRFGKQCTDACSFCRNS 198
           CRFGKQCTDACSFCRN+
Sbjct: 181 CRFGKQCTDACSFCRNN 197

The following BLAST results are available for this feature:
BLAST of CSPI07G11100 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI07G11100 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K5T23.6e-7798.06AWS domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G246640 PE=4 SV... [more]
BLAST of CSPI07G11100 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8646116.12.1e-10098.48hypothetical protein Csa_016893 [Cucumis sativus][more]
BLAST of CSPI07G11100 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 141..161

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G11100.1CSPI07G11100.1mRNA