CSPI07G10760 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI07G10760
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	LOB domain-containing protein
Location	Chr7: 8874533 .. 8877324 (-)
RNA-Seq Expression	CSPI07G10760
Synteny	CSPI07G10760

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATTTAAACAAAATTCACTTCTTTCTTTGAGCTGTTTCAGTTTAATTCTTCATCTGGGTTTTATTCACACAAAATAATATATTATTACAGTTGATAATTAGCAAGCTAAGATCAATTTCTGAAGATTAATTATATAGTAACAATATTTTAGTACTGATCATCAAAATAAATGGCATCGTCGGAGATGATGATGATGATGAATGGGAGCTGCAAAAAGGGGAATGGTGCAGCCGCGCCGTGCGCTGCCTGCAAGCTTTTGCGGCGGCGGTGTGCTCACGACTGTGTTTTTGCTCCTTATTTTCCGGCGGATCATCCCCACAAATTCTCCAGTGTTCACAAGGTCTTTGGTGCTAGTAATGTCAGCAAATTGTTGCAGGTTCATTTCAATAATCTCCTTTCTCCCTTTTCTTTTCTTTGAGTAGGACAATTTGAGGATATTCTCATTAATTACCCCTAAAAATAGTATTGCCATCTCAACTCATTTTCAGCTATATATTGAAAATAACTATGTTAGAAAATTAGGGAAAGTTTTTTTTTGTACTACAACAATATCTATTTTTCGACCTCTCTTCTCATTGGATTCTATATCATTTCTAATGGGTGACAATTTAATGATAGGAGTAATATATATTTATGTTGTTATATTGTAGTATTGAAAATTTTCTTTAAAAATGAGTGTGATAATTGTCTAATTTGTAGTTAATATTGAATTATGATCCAATATCCAATATTTGCCTTAGAGAGATTAAATATTATTCATGGTTTATTTTTGTGGCGGTCTAAAACTGTGTACTTAATTTCATTTTGGTATCCAATAACTTGTAAATTAAAATTTCTAAAAACTATTTCATCATTTAGATATTATACATCCTAATATAATTCAATACTTGTAACTTTTTTTTGTCTAGTCCCTAATTTAGGGGCTAAAATTTGAATTTTGAGAACTGAAGGATTAAAATAAATAAAAAAGAAGCACTTATAATTTAATAAACATATAAATTGTATTGGCCAACCCAGTAGTGTCCTTTAGTAATGGAGGAGTTCTCTCTCTACTTTTAAAAAGCAAGAGAAGGCTATCTTTTGCAAATTATTCTGCATCTCACATGTAAGAAAGAAAAGGGTTTGCTTCAGGTGTCCAGATTAGAGACGAATAATGTAAAAGGATTGCATGTCAAATTTTAATAAATATTAAAAAAAAAAGATGCTTTATTATGCTATTCAGAGTGGAATTAATTTCAATCTATTTTTTGTTTTAGCTAAAGTACTTTATTTGTTTATTTTTAATTCTGAAATGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAATTGGTCTAAAACTTTTGGTGGTGTGGGAATTCTTACAAGTTCATTGCACTCGAATCAAATGTAATTTACTTGAATTTACACTTTGTTATTGTTGGTTTTGGCGTGGGGTTTAGAATGATAGAGATGTTTCGTCTAATGGGTGTGGCGGGAAACTTTAATAAATCTAATATATACTTTTCAATCACTAACTGTTGGCGTAATGCTGACGTTTTAATCATTTCTACAGTGAATGGAGGCTTAAACGTCATGTCCATCTTTTCCATCTCCCAGCTACACCGACAATGGCGTTTTAACCTTCTTCATCTTTTGAGTCCGAAGTTATAAATATATATAGAAAGATTTTTATACGAATCATCTATCTATTTGTAGCTGCTTAAACAATTAACGACACCCTTAATAAATGAATAAAAGTTAACTCATCAATGTGCACACTTTAGCTTTTTATTTATTTATATGCTATTGCATAATATAGATCTATACCTAGACACCTCGCTCTTCTAACCCTAATCAGATGGCCATCTTCATTTTTCTCTACTCCATTGCAATATTTCGTGGGATAAGTACAACAACGTTGTTGAAGAGGGAAAGAAAAGTGAAATTATGATAGATGTGGCTACCATATTAGGGCTATATATAATTATTCTGTGGTAAAGAGAGATTAACAGTAATGCAGTATAAAATGTGTTCATTGCGGTTTGACATAAACATAAGGTTAGTTATCATTTTACATTTTTAGGACGGGTTATTAATCATTTAGGGGAAATTAGTACAAAAATCTCTAGAAACAACCTTATTCTTTTTTGTGTGTTATATATTTAGGTACAATGGATGAGAGAGAGTATATGAGAATTTGAACCCCTCGTGTTTAGAAAATGAGGACATGTGGAGTTCTTCATCTCAATAGTTATTTGGTTTATTTATTTATTTACTTTTCTAAAAGCCTTGAATTATAGTTTAGAGAGTTGGCAGAATAATTGATATAACAATTTGGTGATGGGCACGTTGAATAATTCAGGAGTTACCAGAGCAGCAACGGAGCGATGCAGTGAGTTCGATGGTATATGAGGCAAACGCGAGGATTCGAGATCCGGTGTACGGGTGCGTGGGAGCAATATCATGTCTACAACAGCAAGTGGATGCATTGCAGCAACAATTAGCAATAACACAGGCCCAACTGGTTCAAATGAAAATGGGGCAATTCACAACAACATCACAATCATCATCTAGTACAGATGACCTCCTTCCTCCTCCGCCCAATATCAATGTGGCCGCATCCTCATCCTTATGGTCTTGCTAGTAATTTCTTTTGTTTTGCCACATTTTAGTTATGACTATACTTTTACTTATTTATTGAAAAAATATATCTTGTTTTTTCCTAAATTTTACTTATAGC

mRNA sequence

TATTTAAACAAAATTCACTTCTTTCTTTGAGCTGTTTCAGTTTAATTCTTCATCTGGGTTTTATTCACACAAAATAATATATTATTACAGTTGATAATTAGCAAGCTAAGATCAATTTCTGAAGATTAATTATATAGTAACAATATTTTAGTACTGATCATCAAAATAAATGGCATCGTCGGAGATGATGATGATGATGAATGGGAGCTGCAAAAAGGGGAATGGTGCAGCCGCGCCGTGCGCTGCCTGCAAGCTTTTGCGGCGGCGGTGTGCTCACGACTGTGTTTTTGCTCCTTATTTTCCGGCGGATCATCCCCACAAATTCTCCAGTGTTCACAAGGTCTTTGGTGCTAGTAATGTCAGCAAATTGTTGCAGGAGTTACCAGAGCAGCAACGGAGCGATGCAGTGAGTTCGATGGTATATGAGGCAAACGCGAGGATTCGAGATCCGGTGTACGGGTGCGTGGGAGCAATATCATGTCTACAACAGCAAGTGGATGCATTGCAGCAACAATTAGCAATAACACAGGCCCAACTGGTTCAAATGAAAATGGGGCAATTCACAACAACATCACAATCATCATCTAGTACAGATGACCTCCTTCCTCCTCCGCCCAATATCAATGTGGCCGCATCCTCATCCTTATGGTCTTGCTAGTAATTTCTTTTGTTTTGCCACATTTTAGTTATGACTATACTTTTACTTATTTATTGAAAAAATATATCTTGTTTTTTCCTAAATTTTACTTATAGC

Coding sequence (CDS)

ATGGCATCGTCGGAGATGATGATGATGATGAATGGGAGCTGCAAAAAGGGGAATGGTGCAGCCGCGCCGTGCGCTGCCTGCAAGCTTTTGCGGCGGCGGTGTGCTCACGACTGTGTTTTTGCTCCTTATTTTCCGGCGGATCATCCCCACAAATTCTCCAGTGTTCACAAGGTCTTTGGTGCTAGTAATGTCAGCAAATTGTTGCAGGAGTTACCAGAGCAGCAACGGAGCGATGCAGTGAGTTCGATGGTATATGAGGCAAACGCGAGGATTCGAGATCCGGTGTACGGGTGCGTGGGAGCAATATCATGTCTACAACAGCAAGTGGATGCATTGCAGCAACAATTAGCAATAACACAGGCCCAACTGGTTCAAATGAAAATGGGGCAATTCACAACAACATCACAATCATCATCTAGTACAGATGACCTCCTTCCTCCTCCGCCCAATATCAATGTGGCCGCATCCTCATCCTTATGGTCTTGCTAG

Protein sequence

MASSEMMMMMNGSCKKGNGAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFGASNVSKLLQELPEQQRSDAVSSMVYEANARIRDPVYGCVGAISCLQQQVDALQQQLAITQAQLVQMKMGQFTTTSQSSSSTDDLLPPPPNINVAASSSLWSC*

Homology

[Close]

BLAST of CSPI07G10760 vs. ExPASy Swiss-Prot
Match: Q9SHE9 (LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 4.0e-44
Identity = 98/173 (56.65%), Postives = 120/173 (69.36%), Query Frame = 0


Query: 10  MNGSCKKGNGAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFGASNVSKLLQ 69
           M  S +K  GAA+PCAACKLLRRRCA DCVF+PYFPAD P KF++VH+VFGASNV+K+LQ
Sbjct: 1   MKESSRK-QGAASPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQ 60

Query: 70  ELPEQQRSDAVSSMVYEANARIRDPVYGCVGAISCLQQQVDALQQQLAITQAQLVQMKMG 129
           ELP  QR DAVSSMVYEANAR+RDPVYGCVGAIS LQQQ+D LQ QLA+ QA++V +++ 
Sbjct: 61  ELPIHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVR 120

Query: 130 QFT----------TTSQSSSSTDDLLPPPPNINV----------AASSSLWSC 163
           Q T          + S S S +   + P  N  +          +   S+WSC
Sbjct: 121 QSTNFPGHGLCPDSPSSSGSPSSKQVSPQDNKGMFSHMDIVDEASLGESMWSC 172

[Close]

BLAST of CSPI07G10760 vs. ExPASy Swiss-Prot
Match: Q8LBW3 (LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 SV=2)

HSP 1 Score: 166.8 bits (421), Expect = 2.1e-40
Identity = 79/112 (70.54%), Postives = 96/112 (85.71%), Query Frame = 0


Query: 17  GNGAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFGASNVSKLLQELPEQQR 76
           G   ++PCA+CKLLRRRCA DC+FAPYFP D PHKF+ VHKVFGASNVSK+LQELP  QR
Sbjct: 2   GGPGSSPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQR 61

Query: 77  SDAVSSMVYEANARIRDPVYGCVGAISCLQQQVDALQQQLAITQAQLVQMKM 129
           +DAV+S+V+EANAR+RDPVYGCVGAIS LQ QV  LQ QLA+ QA+++ ++M
Sbjct: 62  ADAVNSLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQM 113

[Close]

BLAST of CSPI07G10760 vs. ExPASy Swiss-Prot
Match: Q8L5T5 (LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 SV=2)

HSP 1 Score: 154.1 bits (388), Expect = 1.4e-36
Identity = 72/112 (64.29%), Postives = 90/112 (80.36%), Query Frame = 0


Query: 23  PCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFGASNVSKLLQELPEQQRSDAVSS 82
           PCAACKLLRRRCA +C F+PYF    PHKF+SVHKVFGASNVSK+L E+PE QR+DA +S
Sbjct: 45  PCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPESQRADAANS 104

Query: 83  MVYEANARIRDPVYGCVGAISCLQQQVDALQQQLAITQAQLVQMKMGQFTTT 135
           +VYEAN R+RDPVYGC+GAIS LQQQV ALQ +L   ++++++ K  +   T
Sbjct: 105 LVYEANVRLRDPVYGCMGAISALQQQVQALQAELTAVRSEILKYKQREAVAT 156

[Close]

BLAST of CSPI07G10760 vs. ExPASy Swiss-Prot
Match: Q9SA51 (LOB domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=LBD3 PE=2 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 2.6e-35
Identity = 84/156 (53.85%), Postives = 105/156 (67.31%), Query Frame = 0


Query: 22  APCAACKLLRRRCAHD-CVFAPYFPADHPHKFSSVHKVFGASNVSKLLQELPEQQRSDAV 81
           +PCA CKLLRR+C  D CVFAPYFPA  P+KF+ VHK+FGASNV+K+LQEL E  RSDAV
Sbjct: 13  SPCAGCKLLRRKCVKDSCVFAPYFPAKEPYKFAIVHKIFGASNVNKMLQELSENHRSDAV 72

Query: 82  SSMVYEANARIRDPVYGCVGAISCLQQQVDALQQQLAITQAQLVQM--------KMGQFT 141
            SMVYEANARI+DPVYGCVG IS L +Q++ LQ QLA  QA+L+ +        K   +T
Sbjct: 73  DSMVYEANARIQDPVYGCVGTISSLHRQLETLQTQLAFAQAELIHIRTLHRIHTKPPPYT 132

Query: 142 TTSQSSSSTDDLLPPPPNINVA------ASSSLWSC 163
            ++ +  S  D      +I++A      A   LWSC
Sbjct: 133 ASTVTFPSNKDFY---SDIDMAVAYTDDAGDFLWSC 165

[Close]

BLAST of CSPI07G10760 vs. ExPASy Swiss-Prot
Match: Q9AT61 (LOB domain-containing protein 13 OS=Arabidopsis thaliana OX=3702 GN=LBD13 PE=1 SV=2)

HSP 1 Score: 147.5 bits (371), Expect = 1.3e-34
Identity = 77/145 (53.10%), Postives = 98/145 (67.59%), Query Frame = 0


Query: 23  PCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFGASNVSKLLQELPEQQRSDAVSS 82
           PCAACKLLRRRCA +C F+PYF    PHKF++VHKVFGASNVSK+L E+ E QR DA +S
Sbjct: 52  PCAACKLLRRRCAEECPFSPYFSPHEPHKFAAVHKVFGASNVSKMLLEVGESQRGDAANS 111

Query: 83  MVYEANARIRDPVYGCVGAISCLQQQVDALQQQLAITQAQLVQMKMGQFT---------- 142
           +VYEAN R+RDP+YGC+GAIS LQ  + +LQ +L   + ++++ K  + T          
Sbjct: 112 LVYEANLRLRDPIYGCMGAISALQHHIQSLQSELTTVRTEILRHKYQEATTITSLQNNFN 171

Query: 143 -TTSQSSSSTDD-------LLPPPP 150
            TT+ SS S D        LLPPPP
Sbjct: 172 STTTTSSVSCDQHALASAILLPPPP 196

[Close]

BLAST of CSPI07G10760 vs. ExPASy TrEMBL
Match: A0A0A0K5P4 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G237840 PE=3 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 4.1e-84
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MASSEMMMMMNGSCKKGNGAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFG 60
           MASSEMMMMMNGSCKKGNGAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFG
Sbjct: 1   MASSEMMMMMNGSCKKGNGAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFG 60

Query: 61  ASNVSKLLQELPEQQRSDAVSSMVYEANARIRDPVYGCVGAISCLQQQVDALQQQLAITQ 120
           ASNVSKLLQELPEQQRSDAVSSMVYEANARIRDPVYGCVGAISCLQQQVDALQQQLAITQ
Sbjct: 61  ASNVSKLLQELPEQQRSDAVSSMVYEANARIRDPVYGCVGAISCLQQQVDALQQQLAITQ 120

Query: 121 AQLVQMKMGQFTTTSQSSSSTDDLLPPPPNINVAASSSLWSC 163
           AQLVQMKMGQFTTTSQSSSSTDDLLPPPPNINVAASSSLWSC
Sbjct: 121 AQLVQMKMGQFTTTSQSSSSTDDLLPPPPNINVAASSSLWSC 162

[Close]

BLAST of CSPI07G10760 vs. ExPASy TrEMBL
Match: A0A5A7U720 (LOB domain-containing protein 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold511G00280 PE=3 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 1.2e-78
Identity = 155/162 (95.68%), Postives = 157/162 (96.91%), Query Frame = 0


Query: 1   MASSEMMMMMNGSCKKGNGAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFG 60
           MASSE  MMM+GSCKKGNGAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFG
Sbjct: 1   MASSE--MMMSGSCKKGNGAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFG 60

Query: 61  ASNVSKLLQELPEQQRSDAVSSMVYEANARIRDPVYGCVGAISCLQQQVDALQQQLAITQ 120
           ASNVSKLLQELPEQQRSDAVSSMVYEANARIRDPVYGCVG ISCLQQQVDALQQQLAITQ
Sbjct: 61  ASNVSKLLQELPEQQRSDAVSSMVYEANARIRDPVYGCVGTISCLQQQVDALQQQLAITQ 120

Query: 121 AQLVQMKMGQFTTTSQSSSSTDDLLPPPPNINVAASSSLWSC 163
           AQLVQ+KMGQFTTTSQSSSSTDD L PPPNINVAASSSLWSC
Sbjct: 121 AQLVQLKMGQFTTTSQSSSSTDDFLSPPPNINVAASSSLWSC 160

[Close]

BLAST of CSPI07G10760 vs. ExPASy TrEMBL
Match: A0A1S3BGP4 (LOB domain-containing protein 4-like OS=Cucumis melo OX=3656 GN=LOC103489649 PE=3 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 1.2e-78
Identity = 155/162 (95.68%), Postives = 157/162 (96.91%), Query Frame = 0


Query: 1   MASSEMMMMMNGSCKKGNGAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFG 60
           MASSE  MMM+GSCKKGNGAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFG
Sbjct: 1   MASSE--MMMSGSCKKGNGAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFG 60

Query: 61  ASNVSKLLQELPEQQRSDAVSSMVYEANARIRDPVYGCVGAISCLQQQVDALQQQLAITQ 120
           ASNVSKLLQELPEQQRSDAVSSMVYEANARIRDPVYGCVG ISCLQQQVDALQQQLAITQ
Sbjct: 61  ASNVSKLLQELPEQQRSDAVSSMVYEANARIRDPVYGCVGTISCLQQQVDALQQQLAITQ 120

Query: 121 AQLVQMKMGQFTTTSQSSSSTDDLLPPPPNINVAASSSLWSC 163
           AQLVQ+KMGQFTTTSQSSSSTDD L PPPNINVAASSSLWSC
Sbjct: 121 AQLVQLKMGQFTTTSQSSSSTDDFLSPPPNINVAASSSLWSC 160

[Close]

BLAST of CSPI07G10760 vs. ExPASy TrEMBL
Match: A0A6J1EVU9 (LOB domain-containing protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111437046 PE=3 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 6.7e-58
Identity = 121/151 (80.13%), Postives = 131/151 (86.75%), Query Frame = 0


Query: 9   MMNGSCKKGNGAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFGASNVSKLL 68
           MM GSCKK  GA +PCAACKLLRRRC  DCVFAPYFPAD PHKFSSVHKVFGASNV+KLL
Sbjct: 5   MMKGSCKK--GAPSPCAACKLLRRRCTQDCVFAPYFPADQPHKFSSVHKVFGASNVTKLL 64

Query: 69  QELPEQQRSDAVSSMVYEANARIRDPVYGCVGAISCLQQQVDALQQQLAITQAQLVQMKM 128
           QELPEQ RSDAVSSMVYEANARIRDP+YGCVG ISCLQ+QVDALQQQLA+TQAQL+  KM
Sbjct: 65  QELPEQHRSDAVSSMVYEANARIRDPIYGCVGTISCLQRQVDALQQQLAMTQAQLLHFKM 124

Query: 129 GQFTTTSQSSSSTDDLLPPPPNINVAASSSL 160
            QF+  SQ  SSTDD+LP PPN NV + +SL
Sbjct: 125 AQFSLASQ-PSSTDDVLPSPPNTNVPSFTSL 152

[Close]

BLAST of CSPI07G10760 vs. ExPASy TrEMBL
Match: A0A6J1HZU0 (LOB domain-containing protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC111468420 PE=3 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 2.7e-51
Identity = 114/146 (78.08%), Postives = 125/146 (85.62%), Query Frame = 0


Query: 19  GAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFGASNVSKLLQELPEQQRSD 78
           GAA PCAACKLLRRRCA  CVFAPYFPA HPHK SSVH+VFGASNVSKLLQEL E QRSD
Sbjct: 2   GAATPCAACKLLRRRCAQHCVFAPYFPAHHPHKCSSVHEVFGASNVSKLLQELGEHQRSD 61

Query: 79  AVSSMVYEANARIRDPVYGCVGAISCLQQQVDALQQQLAITQAQLVQMKMGQFTTTSQSS 138
           AVS MVYEANARIRD V GCVG I+CLQ+QVDALQQ+LAITQAQL+Q+KM QF ++++SS
Sbjct: 62  AVSWMVYEANARIRDQVNGCVGTIACLQRQVDALQQKLAITQAQLLQLKMAQF-SSAKSS 121

Query: 139 SSTDDLLPPPP--NINVAASSSLWSC 163
           S  + LLPP P  NINV AS SLWSC
Sbjct: 122 SVGNLLLPPLPNININVGASPSLWSC 146

[Close]

BLAST of CSPI07G10760 vs. NCBI nr
Match: XP_004139827.1 (LOB domain-containing protein 4 [Cucumis sativus] >KGN44269.1 hypothetical protein Csa_015717 [Cucumis sativus])

HSP 1 Score: 320.5 bits (820), Expect = 8.6e-84
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MASSEMMMMMNGSCKKGNGAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFG 60
           MASSEMMMMMNGSCKKGNGAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFG
Sbjct: 1   MASSEMMMMMNGSCKKGNGAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFG 60

Query: 61  ASNVSKLLQELPEQQRSDAVSSMVYEANARIRDPVYGCVGAISCLQQQVDALQQQLAITQ 120
           ASNVSKLLQELPEQQRSDAVSSMVYEANARIRDPVYGCVGAISCLQQQVDALQQQLAITQ
Sbjct: 61  ASNVSKLLQELPEQQRSDAVSSMVYEANARIRDPVYGCVGAISCLQQQVDALQQQLAITQ 120

Query: 121 AQLVQMKMGQFTTTSQSSSSTDDLLPPPPNINVAASSSLWSC 163
           AQLVQMKMGQFTTTSQSSSSTDDLLPPPPNINVAASSSLWSC
Sbjct: 121 AQLVQMKMGQFTTTSQSSSSTDDLLPPPPNINVAASSSLWSC 162

[Close]

BLAST of CSPI07G10760 vs. NCBI nr
Match: XP_008447124.1 (PREDICTED: LOB domain-containing protein 4-like [Cucumis melo] >KAA0051088.1 LOB domain-containing protein 4-like [Cucumis melo var. makuwa])

HSP 1 Score: 302.4 bits (773), Expect = 2.4e-78
Identity = 155/162 (95.68%), Postives = 157/162 (96.91%), Query Frame = 0


Query: 1   MASSEMMMMMNGSCKKGNGAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFG 60
           MASSE  MMM+GSCKKGNGAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFG
Sbjct: 1   MASSE--MMMSGSCKKGNGAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFG 60

Query: 61  ASNVSKLLQELPEQQRSDAVSSMVYEANARIRDPVYGCVGAISCLQQQVDALQQQLAITQ 120
           ASNVSKLLQELPEQQRSDAVSSMVYEANARIRDPVYGCVG ISCLQQQVDALQQQLAITQ
Sbjct: 61  ASNVSKLLQELPEQQRSDAVSSMVYEANARIRDPVYGCVGTISCLQQQVDALQQQLAITQ 120

Query: 121 AQLVQMKMGQFTTTSQSSSSTDDLLPPPPNINVAASSSLWSC 163
           AQLVQ+KMGQFTTTSQSSSSTDD L PPPNINVAASSSLWSC
Sbjct: 121 AQLVQLKMGQFTTTSQSSSSTDDFLSPPPNINVAASSSLWSC 160

[Close]

BLAST of CSPI07G10760 vs. NCBI nr
Match: XP_038888383.1 (LOB domain-containing protein 4-like [Benincasa hispida])

HSP 1 Score: 289.7 bits (740), Expect = 1.6e-74
Identity = 148/162 (91.36%), Postives = 154/162 (95.06%), Query Frame = 0


Query: 1   MASSEMMMMMNGSCKKGNGAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFG 60
           MASSEMMMMMNGSCKKG+G AAPCAACKLLRRRCA DCVFAPYFPAD PHKFSSVHKVFG
Sbjct: 1   MASSEMMMMMNGSCKKGSG-AAPCAACKLLRRRCAQDCVFAPYFPADQPHKFSSVHKVFG 60

Query: 61  ASNVSKLLQELPEQQRSDAVSSMVYEANARIRDPVYGCVGAISCLQQQVDALQQQLAITQ 120
           ASNVSKLLQELPE QRSDAVSSMVYEANARIRDPVYGCVG ISCLQ+QVDALQQQLA+TQ
Sbjct: 61  ASNVSKLLQELPEHQRSDAVSSMVYEANARIRDPVYGCVGTISCLQRQVDALQQQLAMTQ 120

Query: 121 AQLVQMKMGQFTTTSQSSSSTDDLLPPPPNINVAASSSLWSC 163
           AQLVQ+KMGQFT+TSQSSSSTDDLLP PPNIN+ AS SLWSC
Sbjct: 121 AQLVQLKMGQFTSTSQSSSSTDDLLPSPPNINMGASPSLWSC 161

[Close]

BLAST of CSPI07G10760 vs. NCBI nr
Match: KAG7023005.1 (LOB domain-containing protein 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 233.4 bits (594), Expect = 1.4e-57
Identity = 121/151 (80.13%), Postives = 131/151 (86.75%), Query Frame = 0


Query: 9   MMNGSCKKGNGAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFGASNVSKLL 68
           MM GSCKK  GA +PCAACKLLRRRC  DCVFAPYFPAD PHKFSSVHKVFGASNV+KLL
Sbjct: 5   MMKGSCKK--GAPSPCAACKLLRRRCTQDCVFAPYFPADQPHKFSSVHKVFGASNVTKLL 64

Query: 69  QELPEQQRSDAVSSMVYEANARIRDPVYGCVGAISCLQQQVDALQQQLAITQAQLVQMKM 128
           QELPEQ RSDAVSSMVYEANARIRDP+YGCVG ISCLQ+QVDALQQQLA+TQAQL+  KM
Sbjct: 65  QELPEQHRSDAVSSMVYEANARIRDPIYGCVGTISCLQRQVDALQQQLAMTQAQLLHFKM 124

Query: 129 GQFTTTSQSSSSTDDLLPPPPNINVAASSSL 160
            QF+  SQ  SSTDD+LP PPN NV + +SL
Sbjct: 125 AQFSLASQ-PSSTDDVLPSPPNTNVPSFTSL 152

[Close]

BLAST of CSPI07G10760 vs. NCBI nr
Match: XP_022930643.1 (LOB domain-containing protein 4-like [Cucurbita moschata] >KAG6589307.1 LOB domain-containing protein 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 233.4 bits (594), Expect = 1.4e-57
Identity = 121/151 (80.13%), Postives = 131/151 (86.75%), Query Frame = 0


Query: 9   MMNGSCKKGNGAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFGASNVSKLL 68
           MM GSCKK  GA +PCAACKLLRRRC  DCVFAPYFPAD PHKFSSVHKVFGASNV+KLL
Sbjct: 5   MMKGSCKK--GAPSPCAACKLLRRRCTQDCVFAPYFPADQPHKFSSVHKVFGASNVTKLL 64

Query: 69  QELPEQQRSDAVSSMVYEANARIRDPVYGCVGAISCLQQQVDALQQQLAITQAQLVQMKM 128
           QELPEQ RSDAVSSMVYEANARIRDP+YGCVG ISCLQ+QVDALQQQLA+TQAQL+  KM
Sbjct: 65  QELPEQHRSDAVSSMVYEANARIRDPIYGCVGTISCLQRQVDALQQQLAMTQAQLLHFKM 124

Query: 129 GQFTTTSQSSSSTDDLLPPPPNINVAASSSL 160
            QF+  SQ  SSTDD+LP PPN NV + +SL
Sbjct: 125 AQFSLASQ-PSSTDDVLPSPPNTNVPSFTSL 152

[Close]

BLAST of CSPI07G10760 vs. TAIR 10
Match: AT1G31320.1 (LOB domain-containing protein 4 )

HSP 1 Score: 179.1 bits (453), Expect = 2.9e-45
Identity = 98/173 (56.65%), Postives = 120/173 (69.36%), Query Frame = 0


Query: 10  MNGSCKKGNGAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFGASNVSKLLQ 69
           M  S +K  GAA+PCAACKLLRRRCA DCVF+PYFPAD P KF++VH+VFGASNV+K+LQ
Sbjct: 1   MKESSRK-QGAASPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQ 60

Query: 70  ELPEQQRSDAVSSMVYEANARIRDPVYGCVGAISCLQQQVDALQQQLAITQAQLVQMKMG 129
           ELP  QR DAVSSMVYEANAR+RDPVYGCVGAIS LQQQ+D LQ QLA+ QA++V +++ 
Sbjct: 61  ELPIHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVR 120

Query: 130 QFT----------TTSQSSSSTDDLLPPPPNINV----------AASSSLWSC 163
           Q T          + S S S +   + P  N  +          +   S+WSC
Sbjct: 121 QSTNFPGHGLCPDSPSSSGSPSSKQVSPQDNKGMFSHMDIVDEASLGESMWSC 172

[Close]

BLAST of CSPI07G10760 vs. TAIR 10
Match: AT2G30130.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 166.8 bits (421), Expect = 1.5e-41
Identity = 79/112 (70.54%), Postives = 96/112 (85.71%), Query Frame = 0


Query: 17  GNGAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFGASNVSKLLQELPEQQR 76
           G   ++PCA+CKLLRRRCA DC+FAPYFP D PHKF+ VHKVFGASNVSK+LQELP  QR
Sbjct: 2   GGPGSSPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQR 61

Query: 77  SDAVSSMVYEANARIRDPVYGCVGAISCLQQQVDALQQQLAITQAQLVQMKM 129
           +DAV+S+V+EANAR+RDPVYGCVGAIS LQ QV  LQ QLA+ QA+++ ++M
Sbjct: 62  ADAVNSLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQM 113

[Close]

BLAST of CSPI07G10760 vs. TAIR 10
Match: AT2G40470.1 (LOB domain-containing protein 15 )

HSP 1 Score: 154.1 bits (388), Expect = 9.9e-38
Identity = 72/112 (64.29%), Postives = 90/112 (80.36%), Query Frame = 0


Query: 23  PCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFGASNVSKLLQELPEQQRSDAVSS 82
           PCAACKLLRRRCA +C F+PYF    PHKF+SVHKVFGASNVSK+L E+PE QR+DA +S
Sbjct: 45  PCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPESQRADAANS 104

Query: 83  MVYEANARIRDPVYGCVGAISCLQQQVDALQQQLAITQAQLVQMKMGQFTTT 135
           +VYEAN R+RDPVYGC+GAIS LQQQV ALQ +L   ++++++ K  +   T
Sbjct: 105 LVYEANVRLRDPVYGCMGAISALQQQVQALQAELTAVRSEILKYKQREAVAT 156

[Close]

BLAST of CSPI07G10760 vs. TAIR 10
Match: AT1G16530.1 (ASYMMETRIC LEAVES 2-like 9 )

HSP 1 Score: 149.8 bits (377), Expect = 1.9e-36
Identity = 84/156 (53.85%), Postives = 105/156 (67.31%), Query Frame = 0


Query: 22  APCAACKLLRRRCAHD-CVFAPYFPADHPHKFSSVHKVFGASNVSKLLQELPEQQRSDAV 81
           +PCA CKLLRR+C  D CVFAPYFPA  P+KF+ VHK+FGASNV+K+LQEL E  RSDAV
Sbjct: 13  SPCAGCKLLRRKCVKDSCVFAPYFPAKEPYKFAIVHKIFGASNVNKMLQELSENHRSDAV 72

Query: 82  SSMVYEANARIRDPVYGCVGAISCLQQQVDALQQQLAITQAQLVQM--------KMGQFT 141
            SMVYEANARI+DPVYGCVG IS L +Q++ LQ QLA  QA+L+ +        K   +T
Sbjct: 73  DSMVYEANARIQDPVYGCVGTISSLHRQLETLQTQLAFAQAELIHIRTLHRIHTKPPPYT 132

Query: 142 TTSQSSSSTDDLLPPPPNINVA------ASSSLWSC 163
            ++ +  S  D      +I++A      A   LWSC
Sbjct: 133 ASTVTFPSNKDFY---SDIDMAVAYTDDAGDFLWSC 165

[Close]

BLAST of CSPI07G10760 vs. TAIR 10
Match: AT2G30340.1 (LOB domain-containing protein 13 )

HSP 1 Score: 147.5 bits (371), Expect = 9.2e-36
Identity = 77/145 (53.10%), Postives = 98/145 (67.59%), Query Frame = 0


Query: 23  PCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFGASNVSKLLQELPEQQRSDAVSS 82
           PCAACKLLRRRCA +C F+PYF    PHKF++VHKVFGASNVSK+L E+ E QR DA +S
Sbjct: 52  PCAACKLLRRRCAEECPFSPYFSPHEPHKFAAVHKVFGASNVSKMLLEVGESQRGDAANS 111

Query: 83  MVYEANARIRDPVYGCVGAISCLQQQVDALQQQLAITQAQLVQMKMGQFT---------- 142
           +VYEAN R+RDP+YGC+GAIS LQ  + +LQ +L   + ++++ K  + T          
Sbjct: 112 LVYEANLRLRDPIYGCMGAISALQHHIQSLQSELTTVRTEILRHKYQEATTITSLQNNFN 171

Query: 143 -TTSQSSSSTDD-------LLPPPP 150
            TT+ SS S D        LLPPPP
Sbjct: 172 STTTTSSVSCDQHALASAILLPPPP 196

The following BLAST results are available for this feature:

BLAST of CSPI07G10760 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SHE9	4.0e-44	56.65	LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=...	[more]
Q8LBW3	2.1e-40	70.54	LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 S...	[more]
Q8L5T5	1.4e-36	64.29	LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 S...	[more]
Q9SA51	2.6e-35	53.85	LOB domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=LBD3 PE=2 SV=...	[more]
Q9AT61	1.3e-34	53.10	LOB domain-containing protein 13 OS=Arabidopsis thaliana OX=3702 GN=LBD13 PE=1 S...	[more]

BLAST of CSPI07G10760 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K5P4	4.1e-84	100.00	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G237840 PE=3 SV...	[more]
A0A5A7U720	1.2e-78	95.68	LOB domain-containing protein 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3BGP4	1.2e-78	95.68	LOB domain-containing protein 4-like OS=Cucumis melo OX=3656 GN=LOC103489649 PE=...	[more]
A0A6J1EVU9	6.7e-58	80.13	LOB domain-containing protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC1114370...	[more]
A0A6J1HZU0	2.7e-51	78.08	LOB domain-containing protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC111468420...	[more]

BLAST of CSPI07G10760 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139827.1	8.6e-84	100.00	LOB domain-containing protein 4 [Cucumis sativus] >KGN44269.1 hypothetical prote...	[more]
XP_008447124.1	2.4e-78	95.68	PREDICTED: LOB domain-containing protein 4-like [Cucumis melo] >KAA0051088.1 LOB...	[more]
XP_038888383.1	1.6e-74	91.36	LOB domain-containing protein 4-like [Benincasa hispida]	[more]
KAG7023005.1	1.4e-57	80.13	LOB domain-containing protein 3, partial [Cucurbita argyrosperma subsp. argyrosp...	[more]
XP_022930643.1	1.4e-57	80.13	LOB domain-containing protein 4-like [Cucurbita moschata] >KAG6589307.1 LOB doma...	[more]

BLAST of CSPI07G10760 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G31320.1	2.9e-45	56.65	LOB domain-containing protein 4	[more]
AT2G30130.1	1.5e-41	70.54	Lateral organ boundaries (LOB) domain family protein	[more]
AT2G40470.1	9.9e-38	64.29	LOB domain-containing protein 15	[more]
AT1G16530.1	1.9e-36	53.85	ASYMMETRIC LEAVES 2-like 9	[more]
AT2G30340.1	9.2e-36	53.10	LOB domain-containing protein 13	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 102..122
None	No IPR available	PANTHER	PTHR31301	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	coord: 13..140
None	No IPR available	PANTHER	PTHR31301:SF58	LOB DOMAIN-CONTAINING PROTEIN 3	coord: 13..140
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 23..120 e-value: 1.1E-42 score: 144.7
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 22..123 score: 26.88916

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI07G10760.1	CSPI07G10760.1	mRNA