CSPI07G06390 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI07G06390
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	RING-type domain-containing protein
Location	Chr7: 4693794 .. 4694600 (-)
RNA-Seq Expression	CSPI07G06390
Synteny	CSPI07G06390

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGCACAAATCTTTGATATGTGTATGAATCGTCCCTTCGTCGGCATGTCACTAAAAATCAAGGACTCCATCACCAGCCTGCATCGAACACGAAAACGAATACGAACTCGACGAAACTCATCAAAATATGTCGAACACATCGACCTTAATTTCAAAGTCCAACTCAGATGCACTCACGTTCTTCAAGAATATGAAGATGGCATAATGACTACAACAAGTTTCCTTCATGAACACACATCTTCATCGCATCCTTTAGCAACTTACCAACTTCCTATCTCCATCTTCAAGAACGGCAACAGCACTTTGGAGCAATATCTTTGTGATAGGTTGCATGCACATCGAGAACTCATTGACATTACACTTGTGGCTGATAGAATAATACAGCATTGGGTTAAAAAGGTTGAAGAAGATGATTGTGATCATGATGAAGAAAAGAATAATGAAGACTTTAATGTATTTCAAAAGATTCATTCTCTTGAAATTACGTTAGAGATGAAGATTAATAGGAGGTATGTTGTAGAATCACCGGTAATGATAATGGTTCCAACAAGTGATGATGCTATAGAGAGTATGTTAAGAAGAGTGGAAAACGATGAAATAAGAAGATTAGGGTGTGATGAGGAGGGAATTGAATGTGCAATTTGTTTGGAGGAAATAAGTAGTGATAAAGAGGAGGAAGGAAGTGAGAAATCAGTGTTGCAAATGCCATGTTTGCATATTTTTCATGAAGAATGTATAGATAAATGGTTGAGGACAAGTCATTATTGCCCAACTTGTAGATTTTCAATGCCTACAAATAATTGA

mRNA sequence

ATGGCAGCACAAATCTTTGATATGTGTATGAATCGTCCCTTCGTCGGCATGTCACTAAAAATCAAGGACTCCATCACCAGCCTGCATCGAACACGAAAACGAATACGAACTCGACGAAACTCATCAAAATATGTCGAACACATCGACCTTAATTTCAAAGTCCAACTCAGATGCACTCACGTTCTTCAAGAATATGAAGATGGCATAATGACTACAACAAGTTTCCTTCATGAACACACATCTTCATCGCATCCTTTAGCAACTTACCAACTTCCTATCTCCATCTTCAAGAACGGCAACAGCACTTTGGAGCAATATCTTTGTGATAGGTTGCATGCACATCGAGAACTCATTGACATTACACTTGTGGCTGATAGAATAATACAGCATTGGGTTAAAAAGGTTGAAGAAGATGATTGTGATCATGATGAAGAAAAGAATAATGAAGACTTTAATGTATTTCAAAAGATTCATTCTCTTGAAATTACGTTAGAGATGAAGATTAATAGGAGGTATGTTGTAGAATCACCGGTAATGATAATGGTTCCAACAAGTGATGATGCTATAGAGAGTATGTTAAGAAGAGTGGAAAACGATGAAATAAGAAGATTAGGGTGTGATGAGGAGGGAATTGAATGTGCAATTTGTTTGGAGGAAATAAGTAGTGATAAAGAGGAGGAAGGAAGTGAGAAATCAGTGTTGCAAATGCCATGTTTGCATATTTTTCATGAAGAATGTATAGATAAATGGTTGAGGACAAGTCATTATTGCCCAACTTGTAGATTTTCAATGCCTACAAATAATTGA

Coding sequence (CDS)

ATGGCAGCACAAATCTTTGATATGTGTATGAATCGTCCCTTCGTCGGCATGTCACTAAAAATCAAGGACTCCATCACCAGCCTGCATCGAACACGAAAACGAATACGAACTCGACGAAACTCATCAAAATATGTCGAACACATCGACCTTAATTTCAAAGTCCAACTCAGATGCACTCACGTTCTTCAAGAATATGAAGATGGCATAATGACTACAACAAGTTTCCTTCATGAACACACATCTTCATCGCATCCTTTAGCAACTTACCAACTTCCTATCTCCATCTTCAAGAACGGCAACAGCACTTTGGAGCAATATCTTTGTGATAGGTTGCATGCACATCGAGAACTCATTGACATTACACTTGTGGCTGATAGAATAATACAGCATTGGGTTAAAAAGGTTGAAGAAGATGATTGTGATCATGATGAAGAAAAGAATAATGAAGACTTTAATGTATTTCAAAAGATTCATTCTCTTGAAATTACGTTAGAGATGAAGATTAATAGGAGGTATGTTGTAGAATCACCGGTAATGATAATGGTTCCAACAAGTGATGATGCTATAGAGAGTATGTTAAGAAGAGTGGAAAACGATGAAATAAGAAGATTAGGGTGTGATGAGGAGGGAATTGAATGTGCAATTTGTTTGGAGGAAATAAGTAGTGATAAAGAGGAGGAAGGAAGTGAGAAATCAGTGTTGCAAATGCCATGTTTGCATATTTTTCATGAAGAATGTATAGATAAATGGTTGAGGACAAGTCATTATTGCCCAACTTGTAGATTTTCAATGCCTACAAATAATTGA

Protein sequence

MAAQIFDMCMNRPFVGMSLKIKDSITSLHRTRKRIRTRRNSSKYVEHIDLNFKVQLRCTHVLQEYEDGIMTTTSFLHEHTSSSHPLATYQLPISIFKNGNSTLEQYLCDRLHAHRELIDITLVADRIIQHWVKKVEEDDCDHDEEKNNEDFNVFQKIHSLEITLEMKINRRYVVESPVMIMVPTSDDAIESMLRRVENDEIRRLGCDEEGIECAICLEEISSDKEEEGSEKSVLQMPCLHIFHEECIDKWLRTSHYCPTCRFSMPTNN*

Homology

[Close]

BLAST of CSPI07G06390 vs. ExPASy Swiss-Prot
Match: Q8LPN7 (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.8e-09
Identity = 32/87 (36.78%), Postives = 52/87 (59.77%), Query Frame = 0


Query: 183 PTSDDAIESM-LRRVENDEIRRLGCDEEGIECAICLEEISSDKEEEGSEKSVLQMPCLHI 242
           P S  AI+++   +V  D ++      E  +CA+C++E      E+GS+  V QMPC H+
Sbjct: 190 PASKSAIDALPTVKVTKDMLK-----SEMNQCAVCMDEF-----EDGSD--VKQMPCKHV 249

Query: 243 FHEECIDKWLRTSHYCPTCRFSMPTNN 269
           FH++C+  WL   + CP CRF +PT++
Sbjct: 250 FHQDCLLPWLELHNSCPVCRFELPTDD 264

[Close]

BLAST of CSPI07G06390 vs. ExPASy Swiss-Prot
Match: Q8GYT9 (E3 ubiquitin-protein ligase SIS3 OS=Arabidopsis thaliana OX=3702 GN=SIS3 PE=2 SV=2)

HSP 1 Score: 62.4 bits (150), Expect = 9.1e-09
Identity = 32/88 (36.36%), Postives = 47/88 (53.41%), Query Frame = 0


Query: 177 PVMIMVPTSDDAIESMLRRVENDEIRRLGCDEEGIECAICLEEISSDKEEEGSEKSVLQM 236
           P + + P   +A+E++++  E  + R     ++  EC ICLEE     E  G       +
Sbjct: 201 PGLYLTPAQTEAVEALIQ--ELPKFRLKAVPDDCGECLICLEEFHIGHEVRG-------L 260

Query: 237 PCLHIFHEECIDKWLRTSHYCPTCRFSM 265
           PC H FH ECID+WLR +  CP CR S+
Sbjct: 261 PCAHNFHVECIDQWLRLNVKCPRCRCSV 279

[Close]

BLAST of CSPI07G06390 vs. ExPASy Swiss-Prot
Match: Q9C7I1 (RING-H2 finger protein ATL34 OS=Arabidopsis thaliana OX=3702 GN=ATL34 PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.6e-08
Identity = 28/66 (42.42%), Postives = 35/66 (53.03%), Query Frame = 0


Query: 200 EIRRLGCDEEGIECAICLEEISSDKEEEGSEKSVLQMPCLHIFHEECIDKWLRTSHYCPT 259
           +++ L   + G+ECAICL E       E  E   L  PC H FH  CID WL +   CP 
Sbjct: 115 QVKGLKIGKGGVECAICLNEF------EDEETLRLMPPCSHAFHASCIDVWLSSRSTCPV 174

Query: 260 CRFSMP 266
           CR S+P
Sbjct: 175 CRASLP 174

[Close]

BLAST of CSPI07G06390 vs. ExPASy Swiss-Prot
Match: Q7ZW78 (E3 ubiquitin-protein ligase RNF181 OS=Danio rerio OX=7955 GN=rnf181 PE=2 SV=2)

HSP 1 Score: 60.8 bits (146), Expect = 2.6e-08
Identity = 24/61 (39.34%), Postives = 37/61 (60.66%), Query Frame = 0


Query: 208 EEGIECAICLEEISSDKEEEGSEKSVLQMPCLHIFHEECIDKWLRTSHYCPTCRFSMPTN 267
           ++G++C +CL E          ++SV +MPC H+FH  CI  WL  ++ CP CR  +PT+
Sbjct: 74  DKGVKCPVCLLEFE-------EQESVREMPCKHLFHTGCILPWLNKTNSCPLCRLELPTD 127

Query: 268 N 269
           N
Sbjct: 134 N 127

[Close]

BLAST of CSPI07G06390 vs. ExPASy Swiss-Prot
Match: Q9LQX2 (E3 ubiquitin-protein ligase MPSR1 OS=Arabidopsis thaliana OX=3702 GN=MPSR1 PE=1 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 4.5e-08
Identity = 41/97 (42.27%), Postives = 52/97 (53.61%), Query Frame = 0


Query: 171 RYVVESPVMIMVPTSDDAIESMLRRVENDEIRRLGCDEEGIECAICLEEISSDKEEEGSE 230
           R ++ES      P S  +I++M   VE D     GC  EG EC ICLEE         SE
Sbjct: 80  RSLLESREEGRPPASKASIDAM-PIVEID-----GC--EG-ECVICLEEWK-------SE 139

Query: 231 KSVLQMPCLHIFHEECIDKWLRTSHYCPTCRFSMPTN 268
           ++V +MPC H FH  CI+KWL     CP CR+ MP +
Sbjct: 140 ETVKEMPCKHRFHGGCIEKWLGFHGSCPVCRYEMPVD 160

[Close]

BLAST of CSPI07G06390 vs. ExPASy TrEMBL
Match: A0A0A0K7L5 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G068590 PE=4 SV=1)

HSP 1 Score: 543.9 bits (1400), Expect = 3.8e-151
Identity = 266/268 (99.25%), Postives = 268/268 (100.00%), Query Frame = 0


Query: 1   MAAQIFDMCMNRPFVGMSLKIKDSITSLHRTRKRIRTRRNSSKYVEHIDLNFKVQLRCTH 60
           MAAQIFDMCMNRPFVGMSLKIKDSITSLHRTRKRIRTRRNSSKYVEHIDLNFKVQLRCTH
Sbjct: 1   MAAQIFDMCMNRPFVGMSLKIKDSITSLHRTRKRIRTRRNSSKYVEHIDLNFKVQLRCTH 60

Query: 61  VLQEYEDGIMTTTSFLHEHTSSSHPLATYQLPISIFKNGNSTLEQYLCDRLHAHRELIDI 120
           VLQEYEDGIMTTTSFLHEHTSSSHPLATYQLPISIFKNGNSTLEQYLCDRLHAHRELIDI
Sbjct: 61  VLQEYEDGIMTTTSFLHEHTSSSHPLATYQLPISIFKNGNSTLEQYLCDRLHAHRELIDI 120

Query: 121 TLVADRIIQHWVKKVEEDDCDHDEEKNNEDFNVFQKIHSLEITLEMKINRRYVVESPVMI 180
           TLVADRIIQHWVKKVEEDDCDHDEE+NNEDFNVFQKIHSLEITLEMKINRRYVVESPVMI
Sbjct: 121 TLVADRIIQHWVKKVEEDDCDHDEEENNEDFNVFQKIHSLEITLEMKINRRYVVESPVMI 180

Query: 181 MVPTSDDAIESMLRRVENDEIRRLGCDEEGIECAICLEEISSDKEEEGSEKSVLQMPCLH 240
           MVPTSDDAIESMLRRVENDEIRRLGCDEEGIECAICLEEISSDKEEEGSEKSVLQMPCLH
Sbjct: 181 MVPTSDDAIESMLRRVENDEIRRLGCDEEGIECAICLEEISSDKEEEGSEKSVLQMPCLH 240

Query: 241 IFHEECIDKWLRTSHYCPTCRFSMPTNN 269
           +FHEECIDKWLRTSHYCPTCRFSMPTNN
Sbjct: 241 MFHEECIDKWLRTSHYCPTCRFSMPTNN 268

[Close]

BLAST of CSPI07G06390 vs. ExPASy TrEMBL
Match: A0A5D3C6D9 (Putative zinc finger protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001660 PE=4 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 4.3e-110
Identity = 205/268 (76.49%), Postives = 232/268 (86.57%), Query Frame = 0


Query: 1   MAAQIFDMCMNRPFVGMSLKIKDSITSLHRTRKRIRTRRNSSKYVEHIDLNFKVQLRCTH 60
           MAAQIF++C NRPFVGMSL+I DSITS++RTRKRIRTR+NSSKYV+HIDLNFKVQL+C+H
Sbjct: 1   MAAQIFNICRNRPFVGMSLEINDSITSMNRTRKRIRTRQNSSKYVQHIDLNFKVQLKCSH 60

Query: 61  VLQEYEDGIMTTTSFLHEHTSSSHPLATYQLPISIFKNGNSTLEQYLCDRLHAHRELIDI 120
            L  YEDGI TTTSFL+EHTS  HPLATY+LPISIFK+G+  LEQYL  + H +RE I+ 
Sbjct: 61  FL-VYEDGITTTTSFLNEHTSRPHPLATYKLPISIFKHGDKALEQYLFHKFHVYREFINT 120

Query: 121 TLVADRIIQHWVKKVEEDDCDHDEEKNNEDFNVFQKIHSLEITLEMKINRRYVVESPVMI 180
           TLVADR+IQHWVK+VEEDD +H EE NN DFNVFQKI+ LEITLEM+I +RYV ESP+MI
Sbjct: 121 TLVADRLIQHWVKRVEEDDHEHQEENNNHDFNVFQKIYPLEITLEMRIIQRYVEESPIMI 180

Query: 181 MVPTSDDAIESMLRRVENDEIRRLGCDEEGIECAICLEEISSDKEEEGSEKSVLQMPCLH 240
           MVPTSD AIESMLRRVEND       D+EGI C ICLEEISS KEEE SEKSVLQMPCLH
Sbjct: 181 MVPTSDSAIESMLRRVEND------WDDEGINCVICLEEISS-KEEEESEKSVLQMPCLH 240

Query: 241 IFHEECIDKWLRTSHYCPTCRFSMPTNN 269
           +FH ECI+KWL+TSHYCPTCRFSMPTNN
Sbjct: 241 MFHGECINKWLKTSHYCPTCRFSMPTNN 260

[Close]

BLAST of CSPI07G06390 vs. ExPASy TrEMBL
Match: A0A5A7SPE2 (Putative zinc finger protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold139G001670 PE=4 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 1.6e-109
Identity = 204/268 (76.12%), Postives = 233/268 (86.94%), Query Frame = 0


Query: 1   MAAQIFDMCMNRPFVGMSLKIKDSITSLHRTRKRIRTRRNSSKYVEHIDLNFKVQLRCTH 60
           MAAQIF++C NRPFVGMSL+I DSITS++RTRKRIRTR+NSSKYV+HIDLNFKVQL+C+H
Sbjct: 1   MAAQIFNICRNRPFVGMSLEINDSITSMNRTRKRIRTRQNSSKYVQHIDLNFKVQLKCSH 60

Query: 61  VLQEYEDGIMTTTSFLHEHTSSSHPLATYQLPISIFKNGNSTLEQYLCDRLHAHRELIDI 120
            L  YEDGI TTTSFL+EHTS  HPLATY+LPISIFK+G+  LEQYL  + H +RE I+I
Sbjct: 61  FL-VYEDGITTTTSFLNEHTSRPHPLATYKLPISIFKHGDKALEQYLFHKFHVYREFINI 120

Query: 121 TLVADRIIQHWVKKVEEDDCDHDEEKNNEDFNVFQKIHSLEITLEMKINRRYVVESPVMI 180
           TLVADR+IQHWVK+VEEDD ++ EE NN DFNVFQKI+ LEITLEM+I +RYV ESP+MI
Sbjct: 121 TLVADRLIQHWVKRVEEDDHEYQEENNNHDFNVFQKIYPLEITLEMQIIQRYVEESPIMI 180

Query: 181 MVPTSDDAIESMLRRVENDEIRRLGCDEEGIECAICLEEISSDKEEEGSEKSVLQMPCLH 240
           MVPTSD AIESMLRRVEND       D+EGI C ICLEEISS KEEE +EKSVLQMPCLH
Sbjct: 181 MVPTSDSAIESMLRRVEND------WDDEGINCVICLEEISS-KEEEETEKSVLQMPCLH 240

Query: 241 IFHEECIDKWLRTSHYCPTCRFSMPTNN 269
           +FH ECI+KWL+TSHYCPTCRFSMPTNN
Sbjct: 241 MFHGECINKWLKTSHYCPTCRFSMPTNN 260

[Close]

BLAST of CSPI07G06390 vs. ExPASy TrEMBL
Match: A0A0A0K2A5 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G068580 PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 1.1e-65
Identity = 139/270 (51.48%), Postives = 188/270 (69.63%), Query Frame = 0


Query: 1   MAAQIFDMCMNRPFVGMSLKIKDSITSLHRTRKRIRTRRNSSKYVEHIDLNFKVQLRCTH 60
           MA +IFD C    ++GM L+I D      R + +IRTRRNS  + + IDLNF+VQL+C H
Sbjct: 1   MAERIFDRCRCGSYMGMKLRICDDPVQRRRPQTQIRTRRNSPTFFKQIDLNFEVQLKCQH 60

Query: 61  VLQEYEDGIMTTTSFLHEHTSSSHPLATYQLPISIFKNGNSTLEQYLCDRLHAHRELIDI 120
             Q  E+    TT+ + EH  S HP AT++LPISI ++G+ TL+  L    H +R++I+I
Sbjct: 61  -FQIREEETSNTTTLIDEHIVSQHPFATFRLPISILEHGDKTLKLLLFREFHMYRDIINI 120

Query: 121 TLVADRIIQHWVKKVEEDDCDHDEEKNNEDFNVFQKIHSLEITLEM---KINRRYVVESP 180
             + D II++WV KVEE++   ++++N+    VF+KI+ LEITLE+   +I R    +  
Sbjct: 121 EHLVDEIIKYWVTKVEEEE---EDQENSTSSRVFKKIYRLEITLELLIFQIVRVMDYQPQ 180

Query: 181 VMIMVPTSDDAIESMLRRVENDEIRRLGCDEEGIECAICLEEISSDKEEEGSEKSVLQMP 240
           V++MVPTSD A+ESML+RVEN+EI +LG D++ I C ICLEEI   KEE+GSE  VLQMP
Sbjct: 181 VLMMVPTSDSAMESMLKRVENEEIMKLG-DDDCIHCVICLEEIG--KEEKGSEGVVLQMP 240

Query: 241 CLHIFHEECIDKWLRTSHYCPTCRFSMPTN 268
           CLH+FH ECI+KWL TSHYCPTCRF MP N
Sbjct: 241 CLHVFHGECINKWLNTSHYCPTCRFPMPIN 263

[Close]

BLAST of CSPI07G06390 vs. ExPASy TrEMBL
Match: A0A0A0K7L0 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G067560 PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 6.0e-64
Identity = 141/280 (50.36%), Postives = 187/280 (66.79%), Query Frame = 0


Query: 1   MAAQIFDMCM--NRPFVGMSLKIKDSITSLHRTRKRIRTRRNSSKYVEHIDLNFKVQLRC 60
           MA QIF  C   +  ++GMSL+I D     H+ + +IRT  NS   V+ IDLNFKV+++C
Sbjct: 1   MAEQIFGPCRYGSGSYIGMSLRITDP-DLRHQPQSQIRTPPNSPTLVKQIDLNFKVEVKC 60

Query: 61  THVLQEYEDGIMT-TTSFLHEHTSSSHPLATYQLPISIFKNGNSTLEQYLCDRLHAHREL 120
            H  Q  E G  T  T+ L EH SS HPL T QLP+SIFK+G+ TL++ L      +R +
Sbjct: 61  QHYFQAGEGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAI 120

Query: 121 IDITLVADRIIQHWVKKVEEDDCDHDEEKNNEDFNVFQKIHSLEITLEMKINR------- 180
           I+I LV D II+HWVKKV+E+         N    VF++I+ LEIT+E+ + +       
Sbjct: 121 INIELVVDEIIKHWVKKVDEE---------NSTSQVFEEIYPLEITIELLVYQMIHAIDQ 180

Query: 181 --RYVVESPVMIMVPTSDDAIESMLRRVENDEIRRLGCDEEGIECAICLEEISSDKEEEG 240
               +++ P ++MVPTS+ A+ESML++VEN+EI + G D + I C ICLEEIS  KE++G
Sbjct: 181 PHEIMMDQPQVMMVPTSESAMESMLKKVENEEIVKFG-DNKSINCVICLEEIS--KEKKG 240

Query: 241 SEKSVLQMPCLHIFHEECIDKWLRTSHYCPTCRFSMPTNN 269
           SE  VLQMPCLH+FHEECI KWL+ SHYCPTCRFSMPTNN
Sbjct: 241 SEAVVLQMPCLHMFHEECIRKWLKRSHYCPTCRFSMPTNN 267

[Close]

BLAST of CSPI07G06390 vs. NCBI nr
Match: KGN43806.1 (hypothetical protein Csa_017341 [Cucumis sativus])

HSP 1 Score: 543.9 bits (1400), Expect = 7.9e-151
Identity = 266/268 (99.25%), Postives = 268/268 (100.00%), Query Frame = 0


Query: 1   MAAQIFDMCMNRPFVGMSLKIKDSITSLHRTRKRIRTRRNSSKYVEHIDLNFKVQLRCTH 60
           MAAQIFDMCMNRPFVGMSLKIKDSITSLHRTRKRIRTRRNSSKYVEHIDLNFKVQLRCTH
Sbjct: 1   MAAQIFDMCMNRPFVGMSLKIKDSITSLHRTRKRIRTRRNSSKYVEHIDLNFKVQLRCTH 60

Query: 61  VLQEYEDGIMTTTSFLHEHTSSSHPLATYQLPISIFKNGNSTLEQYLCDRLHAHRELIDI 120
           VLQEYEDGIMTTTSFLHEHTSSSHPLATYQLPISIFKNGNSTLEQYLCDRLHAHRELIDI
Sbjct: 61  VLQEYEDGIMTTTSFLHEHTSSSHPLATYQLPISIFKNGNSTLEQYLCDRLHAHRELIDI 120

Query: 121 TLVADRIIQHWVKKVEEDDCDHDEEKNNEDFNVFQKIHSLEITLEMKINRRYVVESPVMI 180
           TLVADRIIQHWVKKVEEDDCDHDEE+NNEDFNVFQKIHSLEITLEMKINRRYVVESPVMI
Sbjct: 121 TLVADRIIQHWVKKVEEDDCDHDEEENNEDFNVFQKIHSLEITLEMKINRRYVVESPVMI 180

Query: 181 MVPTSDDAIESMLRRVENDEIRRLGCDEEGIECAICLEEISSDKEEEGSEKSVLQMPCLH 240
           MVPTSDDAIESMLRRVENDEIRRLGCDEEGIECAICLEEISSDKEEEGSEKSVLQMPCLH
Sbjct: 181 MVPTSDDAIESMLRRVENDEIRRLGCDEEGIECAICLEEISSDKEEEGSEKSVLQMPCLH 240

Query: 241 IFHEECIDKWLRTSHYCPTCRFSMPTNN 269
           +FHEECIDKWLRTSHYCPTCRFSMPTNN
Sbjct: 241 MFHEECIDKWLRTSHYCPTCRFSMPTNN 268

[Close]

BLAST of CSPI07G06390 vs. NCBI nr
Match: XP_011659722.2 (uncharacterized protein LOC105436242 [Cucumis sativus])

HSP 1 Score: 543.9 bits (1400), Expect = 7.9e-151
Identity = 266/268 (99.25%), Postives = 268/268 (100.00%), Query Frame = 0


Query: 1   MAAQIFDMCMNRPFVGMSLKIKDSITSLHRTRKRIRTRRNSSKYVEHIDLNFKVQLRCTH 60
           MAAQIFDMCMNRPFVGMSLKIKDSITSLHRTRKRIRTRRNSSKYVEHIDLNFKVQLRCTH
Sbjct: 16  MAAQIFDMCMNRPFVGMSLKIKDSITSLHRTRKRIRTRRNSSKYVEHIDLNFKVQLRCTH 75

Query: 61  VLQEYEDGIMTTTSFLHEHTSSSHPLATYQLPISIFKNGNSTLEQYLCDRLHAHRELIDI 120
           VLQEYEDGIMTTTSFLHEHTSSSHPLATYQLPISIFKNGNSTLEQYLCDRLHAHRELIDI
Sbjct: 76  VLQEYEDGIMTTTSFLHEHTSSSHPLATYQLPISIFKNGNSTLEQYLCDRLHAHRELIDI 135

Query: 121 TLVADRIIQHWVKKVEEDDCDHDEEKNNEDFNVFQKIHSLEITLEMKINRRYVVESPVMI 180
           TLVADRIIQHWVKKVEEDDCDHDEE+NNEDFNVFQKIHSLEITLEMKINRRYVVESPVMI
Sbjct: 136 TLVADRIIQHWVKKVEEDDCDHDEEENNEDFNVFQKIHSLEITLEMKINRRYVVESPVMI 195

Query: 181 MVPTSDDAIESMLRRVENDEIRRLGCDEEGIECAICLEEISSDKEEEGSEKSVLQMPCLH 240
           MVPTSDDAIESMLRRVENDEIRRLGCDEEGIECAICLEEISSDKEEEGSEKSVLQMPCLH
Sbjct: 196 MVPTSDDAIESMLRRVENDEIRRLGCDEEGIECAICLEEISSDKEEEGSEKSVLQMPCLH 255

Query: 241 IFHEECIDKWLRTSHYCPTCRFSMPTNN 269
           +FHEECIDKWLRTSHYCPTCRFSMPTNN
Sbjct: 256 MFHEECIDKWLRTSHYCPTCRFSMPTNN 283

[Close]

BLAST of CSPI07G06390 vs. NCBI nr
Match: TYK06862.1 (putative zinc finger protein [Cucumis melo var. makuwa])

HSP 1 Score: 407.5 bits (1046), Expect = 8.8e-110
Identity = 205/268 (76.49%), Postives = 232/268 (86.57%), Query Frame = 0


Query: 1   MAAQIFDMCMNRPFVGMSLKIKDSITSLHRTRKRIRTRRNSSKYVEHIDLNFKVQLRCTH 60
           MAAQIF++C NRPFVGMSL+I DSITS++RTRKRIRTR+NSSKYV+HIDLNFKVQL+C+H
Sbjct: 1   MAAQIFNICRNRPFVGMSLEINDSITSMNRTRKRIRTRQNSSKYVQHIDLNFKVQLKCSH 60

Query: 61  VLQEYEDGIMTTTSFLHEHTSSSHPLATYQLPISIFKNGNSTLEQYLCDRLHAHRELIDI 120
            L  YEDGI TTTSFL+EHTS  HPLATY+LPISIFK+G+  LEQYL  + H +RE I+ 
Sbjct: 61  FL-VYEDGITTTTSFLNEHTSRPHPLATYKLPISIFKHGDKALEQYLFHKFHVYREFINT 120

Query: 121 TLVADRIIQHWVKKVEEDDCDHDEEKNNEDFNVFQKIHSLEITLEMKINRRYVVESPVMI 180
           TLVADR+IQHWVK+VEEDD +H EE NN DFNVFQKI+ LEITLEM+I +RYV ESP+MI
Sbjct: 121 TLVADRLIQHWVKRVEEDDHEHQEENNNHDFNVFQKIYPLEITLEMRIIQRYVEESPIMI 180

Query: 181 MVPTSDDAIESMLRRVENDEIRRLGCDEEGIECAICLEEISSDKEEEGSEKSVLQMPCLH 240
           MVPTSD AIESMLRRVEND       D+EGI C ICLEEISS KEEE SEKSVLQMPCLH
Sbjct: 181 MVPTSDSAIESMLRRVEND------WDDEGINCVICLEEISS-KEEEESEKSVLQMPCLH 240

Query: 241 IFHEECIDKWLRTSHYCPTCRFSMPTNN 269
           +FH ECI+KWL+TSHYCPTCRFSMPTNN
Sbjct: 241 MFHGECINKWLKTSHYCPTCRFSMPTNN 260

[Close]

BLAST of CSPI07G06390 vs. NCBI nr
Match: KAA0031411.1 (putative zinc finger protein [Cucumis melo var. makuwa])

HSP 1 Score: 405.6 bits (1041), Expect = 3.3e-109
Identity = 204/268 (76.12%), Postives = 233/268 (86.94%), Query Frame = 0


Query: 1   MAAQIFDMCMNRPFVGMSLKIKDSITSLHRTRKRIRTRRNSSKYVEHIDLNFKVQLRCTH 60
           MAAQIF++C NRPFVGMSL+I DSITS++RTRKRIRTR+NSSKYV+HIDLNFKVQL+C+H
Sbjct: 1   MAAQIFNICRNRPFVGMSLEINDSITSMNRTRKRIRTRQNSSKYVQHIDLNFKVQLKCSH 60

Query: 61  VLQEYEDGIMTTTSFLHEHTSSSHPLATYQLPISIFKNGNSTLEQYLCDRLHAHRELIDI 120
            L  YEDGI TTTSFL+EHTS  HPLATY+LPISIFK+G+  LEQYL  + H +RE I+I
Sbjct: 61  FL-VYEDGITTTTSFLNEHTSRPHPLATYKLPISIFKHGDKALEQYLFHKFHVYREFINI 120

Query: 121 TLVADRIIQHWVKKVEEDDCDHDEEKNNEDFNVFQKIHSLEITLEMKINRRYVVESPVMI 180
           TLVADR+IQHWVK+VEEDD ++ EE NN DFNVFQKI+ LEITLEM+I +RYV ESP+MI
Sbjct: 121 TLVADRLIQHWVKRVEEDDHEYQEENNNHDFNVFQKIYPLEITLEMQIIQRYVEESPIMI 180

Query: 181 MVPTSDDAIESMLRRVENDEIRRLGCDEEGIECAICLEEISSDKEEEGSEKSVLQMPCLH 240
           MVPTSD AIESMLRRVEND       D+EGI C ICLEEISS KEEE +EKSVLQMPCLH
Sbjct: 181 MVPTSDSAIESMLRRVEND------WDDEGINCVICLEEISS-KEEEETEKSVLQMPCLH 240

Query: 241 IFHEECIDKWLRTSHYCPTCRFSMPTNN 269
           +FH ECI+KWL+TSHYCPTCRFSMPTNN
Sbjct: 241 MFHGECINKWLKTSHYCPTCRFSMPTNN 260

[Close]

BLAST of CSPI07G06390 vs. NCBI nr
Match: KAE8645828.1 (hypothetical protein Csa_017274 [Cucumis sativus])

HSP 1 Score: 245.7 bits (626), Expect = 4.4e-61
Identity = 138/276 (50.00%), Postives = 182/276 (65.94%), Query Frame = 0


Query: 1   MAAQIFDMCMNRPFVGMSLKIKDSITSLHRTRKRIRTRRNSSKYVEHIDLNFKVQLRCTH 60
           MA Q FD C +  ++GMSL+I D           I+TR NS   V+ IDLNFKV+++C H
Sbjct: 267 MAEQNFDDCTSGYYMGMSLRITDP----------IQTRSNSPTSVKQIDLNFKVEVKCQH 326

Query: 61  VLQEYEDGIMTTTSFLHEHTSSSHPLATYQLPISIFKNGNSTLEQYLCDRLHAHRELIDI 120
                ED    TT FL EH  +  P    QLP+SIFK+G+ TL++ L  +    R +I+I
Sbjct: 327 FQAGEEDTTFATT-FLSEHIIAHQPFPALQLPVSIFKHGDKTLKRLLFQKFQMFRAIINI 386

Query: 121 TLVADRIIQHWVKKVEEDDCDHDEEKNNEDFNVFQKIHSLEITLEMKI--------NRRY 180
            LV D+II+HWVKKVE      D+++NN    VF++I+ LEIT+E+ +          + 
Sbjct: 387 ELVTDQIIKHWVKKVE------DDKENNS--GVFEEIYPLEITIEVLVLQMIDAVDQPQE 446

Query: 181 VVESPVMIMVPTSDDAIESMLRRVENDEIRRLGCDEEGIECAICLEEISSDKEEEGSEKS 240
            ++ P + MVPTSD A++SML+RVEN+EI ++G D + I C ICLE+IS  KEE+GSE  
Sbjct: 447 TIDQPQVRMVPTSDSAMKSMLKRVENEEIMKVG-DYKSISCVICLEKIS--KEEKGSEGV 506

Query: 241 VLQMPCLHIFHEECIDKWLRTSHYCPTCRFSMPTNN 269
           VLQMPCLH+FHEECI KWL+TSHYCPTCRFSMP NN
Sbjct: 507 VLQMPCLHMFHEECIRKWLKTSHYCPTCRFSMPINN 520

[Close]

BLAST of CSPI07G06390 vs. TAIR 10
Match: AT3G19950.1 (RING/U-box superfamily protein )

HSP 1 Score: 64.7 bits (156), Expect = 1.3e-10
Identity = 32/87 (36.78%), Postives = 52/87 (59.77%), Query Frame = 0


Query: 183 PTSDDAIESM-LRRVENDEIRRLGCDEEGIECAICLEEISSDKEEEGSEKSVLQMPCLHI 242
           P S  AI+++   +V  D ++      E  +CA+C++E      E+GS+  V QMPC H+
Sbjct: 190 PASKSAIDALPTVKVTKDMLK-----SEMNQCAVCMDEF-----EDGSD--VKQMPCKHV 249

Query: 243 FHEECIDKWLRTSHYCPTCRFSMPTNN 269
           FH++C+  WL   + CP CRF +PT++
Sbjct: 250 FHQDCLLPWLELHNSCPVCRFELPTDD 264

[Close]

BLAST of CSPI07G06390 vs. TAIR 10
Match: AT4G18110.1 (RING/U-box superfamily protein )

HSP 1 Score: 62.8 bits (151), Expect = 4.9e-10
Identity = 31/79 (39.24%), Postives = 46/79 (58.23%), Query Frame = 0


Query: 189 IESMLRRVENDEIRRLGCDEEGI------ECAICLEEISSDKEEEGSEKSVLQMPCLHIF 248
           +E +L  + +D +R    D +G       EC ICLEE++S     GSE+ ++++ C H F
Sbjct: 125 VEVVLETLYSDWLRVNDYDSQGCLIPIEEECIICLEELAS----SGSERRIMKLLCSHSF 184

Query: 249 HEECIDKWLRTSHYCPTCR 262
           H++CI  WLR    CPTCR
Sbjct: 185 HKDCILPWLRCKRSCPTCR 199

[Close]

BLAST of CSPI07G06390 vs. TAIR 10
Match: AT2G29840.1 (RING/U-box superfamily protein )

HSP 1 Score: 62.4 bits (150), Expect = 6.5e-10
Identity = 43/139 (30.94%), Postives = 65/139 (46.76%), Query Frame = 0


Query: 127 IIQHWVKKVEEDDCDHDEEKNNEDFNVFQKIHSLEITLEMKINRRYVVESPVMIMVPTSD 186
           ++ HW+ + E D     EE  +  F         E  L+   N     E+    + P S 
Sbjct: 175 VLFHWLPRYEHDFDHQTEEAFHPQF---------EQVLQASFN-----ETNTARLKPASK 234

Query: 187 DAIESMLRRVENDEIRRLGCDEEGIECAICLEEISSDKEEEGSEKSVLQMPCLHIFHEEC 246
            A+ES+ R+        +G   E   C+ICLEE      ++G  +S++ +PC H F +EC
Sbjct: 235 LAVESLNRKTYKKASDVVG---ENEMCSICLEEF-----DDG--RSIVALPCGHEFDDEC 289

Query: 247 IDKWLRTSHYCPTCRFSMP 266
             KW  T+H CP CRF +P
Sbjct: 295 ALKWFETNHDCPLCRFKLP 289

[Close]

BLAST of CSPI07G06390 vs. TAIR 10
Match: AT3G47990.1 (SUGAR-INSENSITIVE 3 )

HSP 1 Score: 62.4 bits (150), Expect = 6.5e-10
Identity = 32/88 (36.36%), Postives = 47/88 (53.41%), Query Frame = 0


Query: 177 PVMIMVPTSDDAIESMLRRVENDEIRRLGCDEEGIECAICLEEISSDKEEEGSEKSVLQM 236
           P + + P   +A+E++++  E  + R     ++  EC ICLEE     E  G       +
Sbjct: 201 PGLYLTPAQTEAVEALIQ--ELPKFRLKAVPDDCGECLICLEEFHIGHEVRG-------L 260

Query: 237 PCLHIFHEECIDKWLRTSHYCPTCRFSM 265
           PC H FH ECID+WLR +  CP CR S+
Sbjct: 261 PCAHNFHVECIDQWLRLNVKCPRCRCSV 279

[Close]

BLAST of CSPI07G06390 vs. TAIR 10
Match: AT1G35330.1 (RING/U-box superfamily protein )

HSP 1 Score: 60.8 bits (146), Expect = 1.9e-09
Identity = 28/66 (42.42%), Postives = 35/66 (53.03%), Query Frame = 0


Query: 200 EIRRLGCDEEGIECAICLEEISSDKEEEGSEKSVLQMPCLHIFHEECIDKWLRTSHYCPT 259
           +++ L   + G+ECAICL E       E  E   L  PC H FH  CID WL +   CP 
Sbjct: 115 QVKGLKIGKGGVECAICLNEF------EDEETLRLMPPCSHAFHASCIDVWLSSRSTCPV 174

Query: 260 CRFSMP 266
           CR S+P
Sbjct: 175 CRASLP 174

The following BLAST results are available for this feature:

BLAST of CSPI07G06390 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LPN7	1.8e-09	36.78	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19...	[more]
Q8GYT9	9.1e-09	36.36	E3 ubiquitin-protein ligase SIS3 OS=Arabidopsis thaliana OX=3702 GN=SIS3 PE=2 SV...	[more]
Q9C7I1	2.6e-08	42.42	RING-H2 finger protein ATL34 OS=Arabidopsis thaliana OX=3702 GN=ATL34 PE=2 SV=1	[more]
Q7ZW78	2.6e-08	39.34	E3 ubiquitin-protein ligase RNF181 OS=Danio rerio OX=7955 GN=rnf181 PE=2 SV=2	[more]
Q9LQX2	4.5e-08	42.27	E3 ubiquitin-protein ligase MPSR1 OS=Arabidopsis thaliana OX=3702 GN=MPSR1 PE=1 ...	[more]

BLAST of CSPI07G06390 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K7L5	3.8e-151	99.25	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G068590 P...	[more]
A0A5D3C6D9	4.3e-110	76.49	Putative zinc finger protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A5A7SPE2	1.6e-109	76.12	Putative zinc finger protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]
A0A0A0K2A5	1.1e-65	51.48	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G068580 P...	[more]
A0A0A0K7L0	6.0e-64	50.36	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G067560 P...	[more]

BLAST of CSPI07G06390 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN43806.1	7.9e-151	99.25	hypothetical protein Csa_017341 [Cucumis sativus]	[more]
XP_011659722.2	7.9e-151	99.25	uncharacterized protein LOC105436242 [Cucumis sativus]	[more]
TYK06862.1	8.8e-110	76.49	putative zinc finger protein [Cucumis melo var. makuwa]	[more]
KAA0031411.1	3.3e-109	76.12	putative zinc finger protein [Cucumis melo var. makuwa]	[more]
KAE8645828.1	4.4e-61	50.00	hypothetical protein Csa_017274 [Cucumis sativus]	[more]

BLAST of CSPI07G06390 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G19950.1	1.3e-10	36.78	RING/U-box superfamily protein	[more]
AT4G18110.1	4.9e-10	39.24	RING/U-box superfamily protein	[more]
AT2G29840.1	6.5e-10	30.94	RING/U-box superfamily protein	[more]
AT3G47990.1	6.5e-10	36.36	SUGAR-INSENSITIVE 3	[more]
AT1G35330.1	1.9e-09	42.42	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 213..260 e-value: 7.7E-9 score: 45.4
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 212..261 e-value: 3.5E-13 score: 49.7
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 213..261 score: 13.035139
IPR011016	Zinc finger, RING-CH-type	SMART	SM00744	ringv_2	coord: 212..261 e-value: 6.2E-4 score: 17.6
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 177..267 e-value: 3.4E-18 score: 67.1
None	No IPR available	PANTHER	PTHR15710	E3 UBIQUITIN-PROTEIN LIGASE PRAJA	coord: 30..266
None	No IPR available	PANTHER	PTHR15710:SF63	RING/U-BOX SUPERFAMILY PROTEIN	coord: 30..266
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 212..265

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI07G06390.1	CSPI07G06390.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
molecular_function	GO:0061630	ubiquitin protein ligase activity
molecular_function	GO:0008270	zinc ion binding