CSPI07G05940 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI07G05940
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	MADS-box protein JOINTLESS-like isoform X2
Location	Chr7: 4450157 .. 4452694 (+)
RNA-Seq Expression	CSPI07G05940
Synteny	CSPI07G05940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTGTATTTGTGAAGCATTTCTTTGTGTTTTTTATTCTATGGGAAGTAAATTTCACTTCTTTGATTAATATACTAAGTAGTGATTACATACAAAGTATAAAGTATTCTGTATACATTTAAATATCATATAACTTTAAGTCTTTATATTTTTCCTTTTTTGGCATTTTGTGAAGCATCCAGGAGATACTTGAGAGGCATAATAGTGTCCATTCAGAGAACCTTCCCAATTTGAATGAACCATCAGTTGAGTTGCAGGTAATTTATAATATCTCTTTAATGATAACTTTTTGGATTAGGATGTGAAGAGGCGTTAAGAATTATCAACACTTAATTCTAGTTAAGATATTTGGGTGCGTCTTCTGATCCCTCAACATCGATTTAATTCATCAAAATATTGCATCTTATAGAATGAGATTTCTTGATCTAGACTAGCAATTTGACCTATCAAATATAAGATGTTCTCTAACATAAAGAAGTTGAACTGAAAATTAGAGCTCGTTTGATGACGATTTGACCTTTTGACAGCTCGAGAGCAATATTCGAGCGAAGTTGAATGAAGAAGTCGAAAAAAAGAGCCATGAACTAAGGTGAGTGCAGAAGCACAGTAATGCACTTTTAATTCTTTGTAAGCATATTGAATGAATAATCTGTGTGAATAAATGTAATAGGCAAATGAAAGGAGAGGAGCTTCAAGGTTTGGGGATGGAAGAACTTAAGAAATTAGAGAAATCTCTTCAAGGAGGACTCAGTCGTGTTGCTGAAATTATGGTTAAATTACTTCTATATATCACTTTTAATTACTTTTTTCAATCTAAATTTAACATCGTCCCATTTAATTTTTACCTAATTAACTTTGGTTAATTTAATTTCATATATTCAGGATGGAAAAAATACTGATTTGCTCAGCGATATTGGAAGGAAGGTAACCCATTAATTAAATACTTCAAATTTTATTTGTTCTATGGAACCATTAGATTAATCAACATAGATTAGTTCTTCTTCCCTTGTTATACTTGGTTGGTTTTGAGATGAAACATATGCTTATCTAATATGGAATCAAAGTCCATGATGATGCTCATATTGGTATTTGGTCCAAAACAAGAAGTTCAATCGGAGCATGACATACTAGTTTGTTAATAACCATAAAGCCTGTTATATAGGCTCTTATACTGCTAGGTACAAACAAAATCTCACGTTCGTTAGGAAAATAATATCGATATGAGGTATTTTGGATAAAACGGCAAATAAAAAACCAAAGTCACAAAACCTCATAACAAAGTATAGATGGATGGGGAGGGTTCTGAATATCTTTATCAAATAAAACTTTCTTCTCCTTCAACTGATTGACTCTAGCTTCCACCCTTTTTTTCCCACACCATTCTCCCAAGGAATACTTTGTTACATCAAATACAATGAACCTTACAATACTTCCAACTCTCCCTGAACCCTAAACCTAAACACATGCCCCCTTCTCTATATTCAATTTGAAATTACTGTACAAATTATTACTGAAATCTAATAAAACCATTAAGTTGAAGTATTGATATAAATAAACTTACTACAACTATAAACTTAAGCATACGGTATCAAAGCAGAAGTTTTGTGTTGGAACCCTTTGTAATGTCCTTTTGTCTCCTAATTAATACATACCCAAAAATTTTCAAATCTACACATGAGGAGAGGGTTAAAAGTATTGATATCGTTCATAATCCATTCACTTAAGCTTAGAGGTTCTGTTTGATTGTTTTCCTTTTTGTATCTTTAATTTGTTCCTAATTTCAGCGTGTGATTTTAGTAATGGTTTAGATGTTGTAATTGAGACTCAGTTTCATTTGGAGCCCTAATTGCTTTTTTACTCTTAAATTTGTAGCCTATTACATTTTTATTAGCTTTGGGTCATGTTTTATTGTTGCAAATGTATATTGGCAATACATTTATGTAGCAATTAATTTCTTTTAAGAGAACAAAGGATCTCAAACAATTATGTTCATTTATGGAATTATATAGATTGACTTATACTATATTTTAGTTAGTTTCGGGTGTGTTTCAATATCAATTTAAACCCTTAAACATTCAATGTCGTATCATTATAAACTTTAATTAACTAATATTTACATCGATTTAAATTATGAATTTTTGCATGCGTGTATCAGTTTCACCATCCATTAAGTTGTTTTTGGATAGACATCTGATGAGATATATAATTTTATCAATTGAACCCTTAAGAATCTCATGAGTAAATCAATTTAGATCCAAAATTAAGATTGTTTTTTTTTTAGATCATAGCTGGGGTCGCATTTGGCCCCATTGAGATTGTCAGTAACACCACCAATGATGTTGATGTTCAACCTGACCTGTTTGCCCACTTATCTTGCTGTGTTAGATGTTGCACCCTCCTCGGTTGCACCATGACACTTCTCCCAGCCCTTATCTTTGTTTAACATGTCTTGTTGCTATTACACTTTATGTACTAGGGGGTCACAATGTACTTCCTTGAAGTATGATAGTGAGATTGTCCTCCACTTAAATTGTTGA

mRNA sequence

ATGCTTGAGATACTTGAGAGGCATAATAGTGTCCATTCAGAGAACCTTCCCAATTTGAATGAACCATCAGTTGAGTTGCAGCTCGAGAGCAATATTCGAGCGAAGTTGAATGAAGAAGTCGAAAAAAAGAGCCATGAACTAAGGCAAATGAAAGGAGAGGAGCTTCAAGGTTTGGGGATGGAAGAACTTAAGAAATTAGAGAAATCTCTTCAAGGAGGACTCAGTCGTGTTGCTGAAATTATGGATGGAAAAAATACTGATTTGCTCAGCGATATTGGAAGGAAGATCATAGCTGGGGTCGCATTTGGCCCCATTGAGATTGTCAGTAACACCACCAATGATGTTGATGTTCAACCTGACCTGGGGTCACAATGTACTTCCTTGAAGTATGATAGTGAGATTGTCCTCCACTTAAATTGTTGA

Coding sequence (CDS)

ATGCTTGAGATACTTGAGAGGCATAATAGTGTCCATTCAGAGAACCTTCCCAATTTGAATGAACCATCAGTTGAGTTGCAGCTCGAGAGCAATATTCGAGCGAAGTTGAATGAAGAAGTCGAAAAAAAGAGCCATGAACTAAGGCAAATGAAAGGAGAGGAGCTTCAAGGTTTGGGGATGGAAGAACTTAAGAAATTAGAGAAATCTCTTCAAGGAGGACTCAGTCGTGTTGCTGAAATTATGGATGGAAAAAATACTGATTTGCTCAGCGATATTGGAAGGAAGATCATAGCTGGGGTCGCATTTGGCCCCATTGAGATTGTCAGTAACACCACCAATGATGTTGATGTTCAACCTGACCTGGGGTCACAATGTACTTCCTTGAAGTATGATAGTGAGATTGTCCTCCACTTAAATTGTTGA

Protein sequence

MLEILERHNSVHSENLPNLNEPSVELQLESNIRAKLNEEVEKKSHELRQMKGEELQGLGMEELKKLEKSLQGGLSRVAEIMDGKNTDLLSDIGRKIIAGVAFGPIEIVSNTTNDVDVQPDLGSQCTSLKYDSEIVLHLNC*

Homology

[Close]

BLAST of CSPI07G05940 vs. ExPASy Swiss-Prot
Match: Q9FVC1 (MADS-box protein SVP OS=Arabidopsis thaliana OX=3702 GN=SVP PE=1 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 6.9e-16
Identity = 49/96 (51.04%), Postives = 73/96 (76.04%), Query Frame = 0


Query: 1   MLEILERHNSVHSENLPNLNEPSVELQL-ESNIRAKLNEEVEKKSHELRQMKGEELQGLG 60
           M E+LERHN + S+NL  L++PS+ELQL E++  A++++E+  KSH LRQM+GEELQGL 
Sbjct: 62  MKEVLERHN-LQSKNLEKLDQPSLELQLVENSDHARMSKEIADKSHRLRQMRGEELQGLD 121

Query: 61  MEELKKLEKSLQGGLSRVAEIMDGKNTDLLSDIGRK 96
           +EEL++LEK+L+ GL+RV E    K    +S++ +K
Sbjct: 122 IEELQQLEKALETGLTRVIETKSDKIMSEISELQKK 156

[Close]

BLAST of CSPI07G05940 vs. ExPASy Swiss-Prot
Match: Q9FUY6 (MADS-box protein JOINTLESS OS=Solanum lycopersicum OX=4081 GN=J PE=1 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 2.9e-14
Identity = 46/80 (57.50%), Postives = 67/80 (83.75%), Query Frame = 0


Query: 1   MLEILERHNSVHSENLPNLNEPSVELQL-ESNIRAKLNEEVEKKSHELRQMKGEELQGLG 60
           M +ILER + +HS+NL  L++PS+ELQL E++  ++L++E+ +KSH LRQM+GEELQGL 
Sbjct: 62  MKQILERRD-LHSKNLEKLDQPSLELQLVENSNYSRLSKEISEKSHRLRQMRGEELQGLN 121

Query: 61  MEELKKLEKSLQGGLSRVAE 80
           +EEL++LE+SL+ GLSRV E
Sbjct: 122 IEELQQLERSLETGLSRVIE 140

[Close]

BLAST of CSPI07G05940 vs. ExPASy Swiss-Prot
Match: Q9XJ66 (MADS-box transcription factor 22 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS22 PE=2 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 3.5e-12
Identity = 42/95 (44.21%), Postives = 67/95 (70.53%), Query Frame = 0


Query: 1   MLEILERHNSVHSENLPNLNEPSVELQLESNIRAKLNEEVEKKSHELRQMKGEELQGLGM 60
           M EI++++N+ HS NL    +PS++L LE +  A LNE++ + S  LRQM+GEEL+GL +
Sbjct: 62  MNEIIDKYNT-HSNNLGKAEQPSLDLNLEHSKYAHLNEQLAEASLRLRQMRGEELEGLSI 121

Query: 61  EELKKLEKSLQGGLSRVAEIMDGKNTDLLSDIGRK 96
           +EL++LEK+L+ GL RV    D +  + +S++ RK
Sbjct: 122 DELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRK 155

[Close]

BLAST of CSPI07G05940 vs. ExPASy Swiss-Prot
Match: O82794 (MADS-box protein AGL24 OS=Arabidopsis thaliana OX=3702 GN=AGL24 PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 2.8e-09
Identity = 38/80 (47.50%), Postives = 61/80 (76.25%), Query Frame = 0


Query: 1   MLEILERHNSVHSENLPNL-NEPSVELQLESNIRAKLNEEVEKKSHELRQMKGEELQGLG 60
           M +IL R+ S+H+ N+  L + PS  L+LE+   ++L++EVE K+ +LR+++GE+L GL 
Sbjct: 62  MRDILGRY-SLHASNINKLMDPPSTHLRLENCNLSRLSKEVEDKTKQLRKLRGEDLDGLN 121

Query: 61  MEELKKLEKSLQGGLSRVAE 80
           +EEL++LEK L+ GLSRV+E
Sbjct: 122 LEELQRLEKLLESGLSRVSE 140

[Close]

BLAST of CSPI07G05940 vs. ExPASy Swiss-Prot
Match: Q5K4R0 (MADS-box transcription factor 47 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS47 PE=1 SV=3)

HSP 1 Score: 57.8 bits (138), Expect = 1.2e-07
Identity = 40/96 (41.67%), Postives = 60/96 (62.50%), Query Frame = 0


Query: 1   MLEILERHNSVHSENLPNLNEPSVELQLE-SNIRAKLNEEVEKKSHELRQMKGEELQGLG 60
           M +I++R+NS HS+ L       ++LQ E S+  A+L EE+ + S  LRQM+GEEL  L 
Sbjct: 81  MEQIIDRYNS-HSKTLQRAEPSQLDLQGEDSSTCARLKEELAETSLRLRQMRGEELHRLN 140

Query: 61  MEELKKLEKSLQGGLSRVAEIMDGKNTDLLSDIGRK 96
           +E+L++LEKSL+ GL  V +    K  D +  + RK
Sbjct: 141 VEQLQELEKSLESGLGSVLKTKSKKILDEIDGLERK 175

[Close]

BLAST of CSPI07G05940 vs. ExPASy TrEMBL
Match: A0A1S3BZT6 (MADS-box protein JOINTLESS-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495384 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.7e-38
Identity = 99/137 (72.26%), Postives = 109/137 (79.56%), Query Frame = 0


Query: 3   EILERHNSVHSENLPNLNEPSVELQLESNIRAKLNEEVEKKSHELRQMKGEELQGLGMEE 62
           EILERHN+VHS+NLPNLNEPSVELQLESNIRAKLNEEVEKKSHELRQMKGEELQGLGMEE
Sbjct: 64  EILERHNNVHSDNLPNLNEPSVELQLESNIRAKLNEEVEKKSHELRQMKGEELQGLGMEE 123

Query: 63  LKKLEKSLQGGLSRVAEIMDGKNTDLLSDIGRK---------IIAGVAFGPIEIV-SNTT 122
           LKKLEKSLQGGLSRVAEIMDGKN++LLS IGRK         I+  +     E V +N+T
Sbjct: 124 LKKLEKSLQGGLSRVAEIMDGKNSELLSVIGRKEVEKMGEQIIMQNIQGNSSESVGNNST 183

Query: 123 NDVDVQPDLGSQCTSLK 130
           +  +   D  S  TSLK
Sbjct: 184 SSNNPSQDYDSSDTSLK 200

[Close]

BLAST of CSPI07G05940 vs. ExPASy TrEMBL
Match: A0A1S3C1G2 (MADS-box protein SVP-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495384 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 5.1e-38
Identity = 88/94 (93.62%), Postives = 93/94 (98.94%), Query Frame = 0


Query: 3   EILERHNSVHSENLPNLNEPSVELQLESNIRAKLNEEVEKKSHELRQMKGEELQGLGMEE 62
           EILERHN+VHS+NLPNLNEPSVELQLESNIRAKLNEEVEKKSHELRQMKGEELQGLGMEE
Sbjct: 64  EILERHNNVHSDNLPNLNEPSVELQLESNIRAKLNEEVEKKSHELRQMKGEELQGLGMEE 123

Query: 63  LKKLEKSLQGGLSRVAEIMDGKNTDLLSDIGRKI 97
           LKKLEKSLQGGLSRVAEIMDGKN++LLS IGRK+
Sbjct: 124 LKKLEKSLQGGLSRVAEIMDGKNSELLSVIGRKV 157

[Close]

BLAST of CSPI07G05940 vs. ExPASy TrEMBL
Match: A0A6J1CLA0 (MADS-box protein JOINTLESS-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111012209 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.8e-35
Identity = 82/96 (85.42%), Postives = 91/96 (94.79%), Query Frame = 0


Query: 1   MLEILERHNSVHSENLPNLNEPSVELQLESNIRAKLNEEVEKKSHELRQMKGEELQGLGM 60
           M  +LERHNSVHSENLPNLNEPSVELQLESN+RAKLNEEVEKK+HELRQMKGEELQGLGM
Sbjct: 62  MQGLLERHNSVHSENLPNLNEPSVELQLESNMRAKLNEEVEKKTHELRQMKGEELQGLGM 121

Query: 61  EELKKLEKSLQGGLSRVAEIMDGKNTDLLSDIGRKI 97
           EELKKLEKSLQGGL+RV+E+MDG+N DL+ DI RK+
Sbjct: 122 EELKKLEKSLQGGLNRVSEMMDGRNIDLIHDIERKV 157

[Close]

BLAST of CSPI07G05940 vs. ExPASy TrEMBL
Match: A0A6J1CKS2 (MADS-box protein JOINTLESS-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111012209 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.8e-35
Identity = 82/96 (85.42%), Postives = 91/96 (94.79%), Query Frame = 0


Query: 1   MLEILERHNSVHSENLPNLNEPSVELQLESNIRAKLNEEVEKKSHELRQMKGEELQGLGM 60
           M  +LERHNSVHSENLPNLNEPSVELQLESN+RAKLNEEVEKK+HELRQMKGEELQGLGM
Sbjct: 62  MQGLLERHNSVHSENLPNLNEPSVELQLESNMRAKLNEEVEKKTHELRQMKGEELQGLGM 121

Query: 61  EELKKLEKSLQGGLSRVAEIMDGKNTDLLSDIGRKI 97
           EELKKLEKSLQGGL+RV+E+MDG+N DL+ DI RK+
Sbjct: 122 EELKKLEKSLQGGLNRVSEMMDGRNIDLIHDIERKV 157

[Close]

BLAST of CSPI07G05940 vs. ExPASy TrEMBL
Match: A0A6J1IA12 (MADS-box protein JOINTLESS-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111470617 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 3.4e-34
Identity = 79/93 (84.95%), Postives = 88/93 (94.62%), Query Frame = 0


Query: 4   ILERHNSVHSENLPNLNEPSVELQLESNIRAKLNEEVEKKSHELRQMKGEELQGLGMEEL 63
           +LE+H+SVHSENLPNLNEPSVE QLESNIRAKLNEEVEKK HELRQMKGEELQGLG+EEL
Sbjct: 65  LLEKHSSVHSENLPNLNEPSVEFQLESNIRAKLNEEVEKKRHELRQMKGEELQGLGLEEL 124

Query: 64  KKLEKSLQGGLSRVAEIMDGKNTDLLSDIGRKI 97
           KKLEKSL GGLSRVAE+MDG+N +L+ DIGRK+
Sbjct: 125 KKLEKSLLGGLSRVAEMMDGRNAELICDIGRKV 157

[Close]

BLAST of CSPI07G05940 vs. NCBI nr
Match: XP_031744925.1 (MADS-box protein SVP isoform X2 [Cucumis sativus])

HSP 1 Score: 176.0 bits (445), Expect = 2.3e-40
Identity = 93/94 (98.94%), Postives = 94/94 (100.00%), Query Frame = 0


Query: 3   EILERHNSVHSENLPNLNEPSVELQLESNIRAKLNEEVEKKSHELRQMKGEELQGLGMEE 62
           EILERHNSVHSENLPNLNEPSVELQLESNIRAKLNEEVEKKSHELRQMKGEELQGLGMEE
Sbjct: 64  EILERHNSVHSENLPNLNEPSVELQLESNIRAKLNEEVEKKSHELRQMKGEELQGLGMEE 123

Query: 63  LKKLEKSLQGGLSRVAEIMDGKNTDLLSDIGRKI 97
           LKKLEKSLQGGLSRVAEIMDGKNTDLLSDIGRK+
Sbjct: 124 LKKLEKSLQGGLSRVAEIMDGKNTDLLSDIGRKV 157

[Close]

BLAST of CSPI07G05940 vs. NCBI nr
Match: XP_004136891.2 (MADS-box protein SVP isoform X1 [Cucumis sativus] >XP_011658821.1 MADS-box protein SVP isoform X1 [Cucumis sativus] >KAE8645819.1 hypothetical protein Csa_017269 [Cucumis sativus])

HSP 1 Score: 176.0 bits (445), Expect = 2.3e-40
Identity = 93/94 (98.94%), Postives = 94/94 (100.00%), Query Frame = 0


Query: 3   EILERHNSVHSENLPNLNEPSVELQLESNIRAKLNEEVEKKSHELRQMKGEELQGLGMEE 62
           EILERHNSVHSENLPNLNEPSVELQLESNIRAKLNEEVEKKSHELRQMKGEELQGLGMEE
Sbjct: 64  EILERHNSVHSENLPNLNEPSVELQLESNIRAKLNEEVEKKSHELRQMKGEELQGLGMEE 123

Query: 63  LKKLEKSLQGGLSRVAEIMDGKNTDLLSDIGRKI 97
           LKKLEKSLQGGLSRVAEIMDGKNTDLLSDIGRK+
Sbjct: 124 LKKLEKSLQGGLSRVAEIMDGKNTDLLSDIGRKV 157

[Close]

BLAST of CSPI07G05940 vs. NCBI nr
Match: XP_008455141.1 (PREDICTED: MADS-box protein JOINTLESS-like isoform X2 [Cucumis melo])

HSP 1 Score: 168.7 bits (426), Expect = 3.6e-38
Identity = 99/137 (72.26%), Postives = 109/137 (79.56%), Query Frame = 0


Query: 3   EILERHNSVHSENLPNLNEPSVELQLESNIRAKLNEEVEKKSHELRQMKGEELQGLGMEE 62
           EILERHN+VHS+NLPNLNEPSVELQLESNIRAKLNEEVEKKSHELRQMKGEELQGLGMEE
Sbjct: 64  EILERHNNVHSDNLPNLNEPSVELQLESNIRAKLNEEVEKKSHELRQMKGEELQGLGMEE 123

Query: 63  LKKLEKSLQGGLSRVAEIMDGKNTDLLSDIGRK---------IIAGVAFGPIEIV-SNTT 122
           LKKLEKSLQGGLSRVAEIMDGKN++LLS IGRK         I+  +     E V +N+T
Sbjct: 124 LKKLEKSLQGGLSRVAEIMDGKNSELLSVIGRKEVEKMGEQIIMQNIQGNSSESVGNNST 183

Query: 123 NDVDVQPDLGSQCTSLK 130
           +  +   D  S  TSLK
Sbjct: 184 SSNNPSQDYDSSDTSLK 200

[Close]

BLAST of CSPI07G05940 vs. NCBI nr
Match: XP_008455140.1 (PREDICTED: MADS-box protein SVP-like isoform X1 [Cucumis melo])

HSP 1 Score: 167.2 bits (422), Expect = 1.0e-37
Identity = 88/94 (93.62%), Postives = 93/94 (98.94%), Query Frame = 0


Query: 3   EILERHNSVHSENLPNLNEPSVELQLESNIRAKLNEEVEKKSHELRQMKGEELQGLGMEE 62
           EILERHN+VHS+NLPNLNEPSVELQLESNIRAKLNEEVEKKSHELRQMKGEELQGLGMEE
Sbjct: 64  EILERHNNVHSDNLPNLNEPSVELQLESNIRAKLNEEVEKKSHELRQMKGEELQGLGMEE 123

Query: 63  LKKLEKSLQGGLSRVAEIMDGKNTDLLSDIGRKI 97
           LKKLEKSLQGGLSRVAEIMDGKN++LLS IGRK+
Sbjct: 124 LKKLEKSLQGGLSRVAEIMDGKNSELLSVIGRKV 157

[Close]

BLAST of CSPI07G05940 vs. NCBI nr
Match: XP_038886864.1 (MADS-box protein SVP-like isoform X3 [Benincasa hispida])

HSP 1 Score: 164.9 bits (416), Expect = 5.2e-37
Identity = 86/93 (92.47%), Postives = 92/93 (98.92%), Query Frame = 0


Query: 4   ILERHNSVHSENLPNLNEPSVELQLESNIRAKLNEEVEKKSHELRQMKGEELQGLGMEEL 63
           ILERHNSV+SENLPNLNEPSVELQLESNIRAKLNEEVEKK+HELRQMKGEELQGLGM+EL
Sbjct: 65  ILERHNSVNSENLPNLNEPSVELQLESNIRAKLNEEVEKKTHELRQMKGEELQGLGMDEL 124

Query: 64  KKLEKSLQGGLSRVAEIMDGKNTDLLSDIGRKI 97
           KKLEKSLQG LSRVAEIMDG+NTDL+SDIGRK+
Sbjct: 125 KKLEKSLQGALSRVAEIMDGRNTDLISDIGRKV 157

[Close]

BLAST of CSPI07G05940 vs. TAIR 10
Match: AT2G22540.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 85.1 bits (209), Expect = 4.9e-17
Identity = 49/96 (51.04%), Postives = 73/96 (76.04%), Query Frame = 0


Query: 1   MLEILERHNSVHSENLPNLNEPSVELQL-ESNIRAKLNEEVEKKSHELRQMKGEELQGLG 60
           M E+LERHN + S+NL  L++PS+ELQL E++  A++++E+  KSH LRQM+GEELQGL 
Sbjct: 62  MKEVLERHN-LQSKNLEKLDQPSLELQLVENSDHARMSKEIADKSHRLRQMRGEELQGLD 121

Query: 61  MEELKKLEKSLQGGLSRVAEIMDGKNTDLLSDIGRK 96
           +EEL++LEK+L+ GL+RV E    K    +S++ +K
Sbjct: 122 IEELQQLEKALETGLTRVIETKSDKIMSEISELQKK 156

[Close]

BLAST of CSPI07G05940 vs. TAIR 10
Match: AT2G22540.2 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 85.1 bits (209), Expect = 4.9e-17
Identity = 49/96 (51.04%), Postives = 73/96 (76.04%), Query Frame = 0


Query: 1   MLEILERHNSVHSENLPNLNEPSVELQL-ESNIRAKLNEEVEKKSHELRQMKGEELQGLG 60
           M E+LERHN + S+NL  L++PS+ELQL E++  A++++E+  KSH LRQM+GEELQGL 
Sbjct: 57  MKEVLERHN-LQSKNLEKLDQPSLELQLVENSDHARMSKEIADKSHRLRQMRGEELQGLD 116

Query: 61  MEELKKLEKSLQGGLSRVAEIMDGKNTDLLSDIGRK 96
           +EEL++LEK+L+ GL+RV E    K    +S++ +K
Sbjct: 117 IEELQQLEKALETGLTRVIETKSDKIMSEISELQKK 151

[Close]

BLAST of CSPI07G05940 vs. TAIR 10
Match: AT4G24540.1 (AGAMOUS-like 24 )

HSP 1 Score: 63.2 bits (152), Expect = 2.0e-10
Identity = 38/80 (47.50%), Postives = 61/80 (76.25%), Query Frame = 0


Query: 1   MLEILERHNSVHSENLPNL-NEPSVELQLESNIRAKLNEEVEKKSHELRQMKGEELQGLG 60
           M +IL R+ S+H+ N+  L + PS  L+LE+   ++L++EVE K+ +LR+++GE+L GL 
Sbjct: 62  MRDILGRY-SLHASNINKLMDPPSTHLRLENCNLSRLSKEVEDKTKQLRKLRGEDLDGLN 121

Query: 61  MEELKKLEKSLQGGLSRVAE 80
           +EEL++LEK L+ GLSRV+E
Sbjct: 122 LEELQRLEKLLESGLSRVSE 140

The following BLAST results are available for this feature:

BLAST of CSPI07G05940 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FVC1	6.9e-16	51.04	MADS-box protein SVP OS=Arabidopsis thaliana OX=3702 GN=SVP PE=1 SV=1	[more]
Q9FUY6	2.9e-14	57.50	MADS-box protein JOINTLESS OS=Solanum lycopersicum OX=4081 GN=J PE=1 SV=1	[more]
Q9XJ66	3.5e-12	44.21	MADS-box transcription factor 22 OS=Oryza sativa subsp. japonica OX=39947 GN=MAD...	[more]
O82794	2.8e-09	47.50	MADS-box protein AGL24 OS=Arabidopsis thaliana OX=3702 GN=AGL24 PE=1 SV=1	[more]
Q5K4R0	1.2e-07	41.67	MADS-box transcription factor 47 OS=Oryza sativa subsp. japonica OX=39947 GN=MAD...	[more]

BLAST of CSPI07G05940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BZT6	1.7e-38	72.26	MADS-box protein JOINTLESS-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC1034953...	[more]
A0A1S3C1G2	5.1e-38	93.62	MADS-box protein SVP-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495384 PE=...	[more]
A0A6J1CLA0	1.8e-35	85.42	MADS-box protein JOINTLESS-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A6J1CKS2	1.8e-35	85.42	MADS-box protein JOINTLESS-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A6J1IA12	3.4e-34	84.95	MADS-box protein JOINTLESS-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]

BLAST of CSPI07G05940 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031744925.1	2.3e-40	98.94	MADS-box protein SVP isoform X2 [Cucumis sativus]	[more]
XP_004136891.2	2.3e-40	98.94	MADS-box protein SVP isoform X1 [Cucumis sativus] >XP_011658821.1 MADS-box prote...	[more]
XP_008455141.1	3.6e-38	72.26	PREDICTED: MADS-box protein JOINTLESS-like isoform X2 [Cucumis melo]	[more]
XP_008455140.1	1.0e-37	93.62	PREDICTED: MADS-box protein SVP-like isoform X1 [Cucumis melo]	[more]
XP_038886864.1	5.2e-37	92.47	MADS-box protein SVP-like isoform X3 [Benincasa hispida]	[more]

BLAST of CSPI07G05940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G22540.1	4.9e-17	51.04	K-box region and MADS-box transcription factor family protein	[more]
AT2G22540.2	4.9e-17	51.04	K-box region and MADS-box transcription factor family protein	[more]
AT4G24540.1	2.0e-10	47.50	AGAMOUS-like 24	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 33..53
None	No IPR available	PANTHER	PTHR48019	SERUM RESPONSE FACTOR HOMOLOG	coord: 3..86
None	No IPR available	PANTHER	PTHR48019:SF57	SUBFAMILY NOT NAMED	coord: 3..86
IPR002487	Transcription factor, K-box	PFAM	PF01486	K-box	coord: 34..78 e-value: 2.3E-7 score: 30.9

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI07G05940.1	CSPI07G05940.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity