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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: five_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. CAAAACCAATCCCCTTCTCAATTACAATGCCTCACTCTCTCCTTCTCAACGCCCTCTTAGCGGCAGCGCTGCTCTTCTCCGCCGCTGCCATATCCCCGTCCCCGTCCCCGTCGCCCACTCCTCCTGCCTCCCTTTCCCCTCCCTGGAGATGGGCTCCCATCACCAAGCCTCCTACCCAACCACCAACGCCGTCCCATGAAACCGAGCCCAGTACTCCACCGCCGTCGCCTACTTCAGTTCCGCCGCCGGCCCATCACGATGAGCCACCAACTGCACAACCAGTTTCCCCTTCTCCGTCTCCGACGTGGATTGCCGAACCGCCTTCGGAAGCACTGTCGCCGTCGAAAGCAAAGAGTGATGGGTTTAAGAACAGCTTCTCGGTGGTAGGATCGGTGGCTATTGGAGCAATGGCTGCTGCTGCTCTCCTTTGA mRNA sequence CAAAACCAATCCCCTTCTCAATTACAATGCCTCACTCTCTCCTTCTCAACGCCCTCTTAGCGGCAGCGCTGCTCTTCTCCGCCGCTGCCATATCCCCGTCCCCGTCCCCGTCGCCCACTCCTCCTGCCTCCCTTTCCCCTCCCTGGAGATGGGCTCCCATCACCAAGCCTCCTACCCAACCACCAACGCCGTCCCATGAAACCGAGCCCAGTACTCCACCGCCGTCGCCTACTTCAGTTCCGCCGCCGGCCCATCACGATGAGCCACCAACTGCACAACCAGTTTCCCCTTCTCCGTCTCCGACGTGGATTGCCGAACCGCCTTCGGAAGCACTGTCGCCGTCGAAAGCAAAGAGTGATGGGTTTAAGAACAGCTTCTCGGTGGTAGGATCGGTGGCTATTGGAGCAATGGCTGCTGCTGCTCTCCTTTGA Coding sequence (CDS) ATGCCTCACTCTCTCCTTCTCAACGCCCTCTTAGCGGCAGCGCTGCTCTTCTCCGCCGCTGCCATATCCCCGTCCCCGTCCCCGTCGCCCACTCCTCCTGCCTCCCTTTCCCCTCCCTGGAGATGGGCTCCCATCACCAAGCCTCCTACCCAACCACCAACGCCGTCCCATGAAACCGAGCCCAGTACTCCACCGCCGTCGCCTACTTCAGTTCCGCCGCCGGCCCATCACGATGAGCCACCAACTGCACAACCAGTTTCCCCTTCTCCGTCTCCGACGTGGATTGCCGAACCGCCTTCGGAAGCACTGTCGCCGTCGAAAGCAAAGAGTGATGGGTTTAAGAACAGCTTCTCGGTGGTAGGATCGGTGGCTATTGGAGCAATGGCTGCTGCTGCTCTCCTTTGA Protein sequence MPHSLLLNALLAAALLFSAAAISPSPSPSPTPPASLSPPWRWAPITKPPTQPPTPSHETEPSTPPPSPTSVPPPAHHDEPPTAQPVSPSPSPTWIAEPPSEALSPSKAKSDGFKNSFSVVGSVAIGAMAAAALL*
Homology
BLAST of CSPI07G05780 vs. ExPASy TrEMBL
Match: A0A0A0K238 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G064060 PE=4 SV=1) HSP 1 Score: 235.7 bits (600), Expect = 1.1e-58 Identity = 132/134 (98.51%), Postives = 133/134 (99.25%), Query Frame = 0 Query: 1 MPHSLLLNALLAAALLFSAAAISPSPSPSPTPPASLSPPWRWAPITKPPTQPPTPSHETE 60 MPHSLLLNALLAAALLFSAAAISPSPSPSPTPPASLSPPWRWAPITKPPTQPPTPSHETE Sbjct: 1 MPHSLLLNALLAAALLFSAAAISPSPSPSPTPPASLSPPWRWAPITKPPTQPPTPSHETE 60
Query: 61 PSTPPPSPTSVPPPAHHDEPPTAQPVSPSPSPTWIAEPPSEALSPSKAKSDGFKNSFSVV 120 PSTPPPSPTSVPPPAHHDEPPTAQP SPSPSPTWIAEPPSEALSPSKAKSDGFKNSFS+V Sbjct: 61 PSTPPPSPTSVPPPAHHDEPPTAQPDSPSPSPTWIAEPPSEALSPSKAKSDGFKNSFSMV 120
Query: 121 GSVAIGAMAAAALL 135 GSVAIGAMAAAALL Sbjct: 121 GSVAIGAMAAAALL 134
BLAST of CSPI07G05780 vs. ExPASy TrEMBL
Match: A0A6J1CJN4 (extensin-like OS=Momordica charantia OX=3673 GN=LOC111012233 PE=4 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 1.1e-18 Identity = 83/149 (55.70%), Postives = 99/149 (66.44%), Query Frame = 0 Query: 11 LAAALLFSAAAISPSPSPSPTPPASLSPPWRWAPITKPPTQP----PTPSHE-TEPSTPP 70 +AAALL SAAA +P P+PSP+P A+ SPPWRW P KPPT P P PS + T PS+P Sbjct: 1 MAAALLASAAA-APRPAPSPSPMATPSPPWRWTPNPKPPTPPTSSSPAPSPQPTPPSSPA 60
Query: 71 PSP---TSVPPPAHHDEPPTAQPVSP-----------------SPSPTWIAEPPSEALSP 130 PSP T+V PPA PPTA PVSP +P+P+WIA PP++AL+P Sbjct: 61 PSPSPTTAVVPPA----PPTAAPVSPPPQTQSPAPPVTPPPAQAPAPSWIAGPPADALAP 120
Query: 131 SKAKSDGFKNSFSVVGSVAIGAMAAAALL 135 SK KS+ KN FS+VGSV IGAMAAAALL Sbjct: 121 SKHKSNALKNRFSLVGSVGIGAMAAAALL 144
BLAST of CSPI07G05780 vs. NCBI nr
Match: XP_011659717.1 (vegetative cell wall protein gp1 [Cucumis sativus] >KGN43745.1 hypothetical protein Csa_017249 [Cucumis sativus]) HSP 1 Score: 235.7 bits (600), Expect = 2.3e-58 Identity = 132/134 (98.51%), Postives = 133/134 (99.25%), Query Frame = 0 Query: 1 MPHSLLLNALLAAALLFSAAAISPSPSPSPTPPASLSPPWRWAPITKPPTQPPTPSHETE 60 MPHSLLLNALLAAALLFSAAAISPSPSPSPTPPASLSPPWRWAPITKPPTQPPTPSHETE Sbjct: 1 MPHSLLLNALLAAALLFSAAAISPSPSPSPTPPASLSPPWRWAPITKPPTQPPTPSHETE 60
Query: 61 PSTPPPSPTSVPPPAHHDEPPTAQPVSPSPSPTWIAEPPSEALSPSKAKSDGFKNSFSVV 120 PSTPPPSPTSVPPPAHHDEPPTAQP SPSPSPTWIAEPPSEALSPSKAKSDGFKNSFS+V Sbjct: 61 PSTPPPSPTSVPPPAHHDEPPTAQPDSPSPSPTWIAEPPSEALSPSKAKSDGFKNSFSMV 120
Query: 121 GSVAIGAMAAAALL 135 GSVAIGAMAAAALL Sbjct: 121 GSVAIGAMAAAALL 134
BLAST of CSPI07G05780 vs. NCBI nr
Match: XP_038887113.1 (anther-specific proline-rich protein APG-like [Benincasa hispida]) HSP 1 Score: 137.5 bits (345), Expect = 8.5e-29 Identity = 100/153 (65.36%), Postives = 109/153 (71.24%), Query Frame = 0 Query: 1 MPHSLLLNALLAAALLFSAAAI-SPSPSPSP--TPPASLSPPWRWAPITKPPTQPPTPSH 60 MPHS LLNALLAAALLFSAAA +P+PSP+P TPPAS SPPWRW PITKPP TPSH Sbjct: 1 MPHSALLNALLAAALLFSAAAAPAPAPSPAPLHTPPASPSPPWRWTPITKPPPS-STPSH 60
Query: 61 ETEPSTPP------PSPTSVPPPAHHDEPPTAQPV----------SPSPSPTWIAEPPSE 120 E++P+ PP PSPT V PP HH PT +PV SPSPSP+WIA PP E Sbjct: 61 ESKPTPPPSSPPPTPSPTPVLPP-HHHHAPTERPVSLPLQKSPSPSPSPSPSWIAVPPPE 120
Query: 121 ALSPSKAKSDGFKNSFSVVGSVAIGAMAAAALL 135 A +PSKAKSD F N FSVV SVAI AMAAA LL Sbjct: 121 APAPSKAKSDAFNNRFSVVASVAIDAMAAALLL 151
BLAST of CSPI07G05780 vs. NCBI nr
Match: XP_022141995.1 (extensin-like [Momordica charantia]) HSP 1 Score: 102.8 bits (255), Expect = 2.3e-18 Identity = 83/149 (55.70%), Postives = 99/149 (66.44%), Query Frame = 0 Query: 11 LAAALLFSAAAISPSPSPSPTPPASLSPPWRWAPITKPPTQP----PTPSHE-TEPSTPP 70 +AAALL SAAA +P P+PSP+P A+ SPPWRW P KPPT P P PS + T PS+P Sbjct: 1 MAAALLASAAA-APRPAPSPSPMATPSPPWRWTPNPKPPTPPTSSSPAPSPQPTPPSSPA 60
Query: 71 PSP---TSVPPPAHHDEPPTAQPVSP-----------------SPSPTWIAEPPSEALSP 130 PSP T+V PPA PPTA PVSP +P+P+WIA PP++AL+P Sbjct: 61 PSPSPTTAVVPPA----PPTAAPVSPPPQTQSPAPPVTPPPAQAPAPSWIAGPPADALAP 120
Query: 131 SKAKSDGFKNSFSVVGSVAIGAMAAAALL 135 SK KS+ KN FS+VGSV IGAMAAAALL Sbjct: 121 SKHKSNALKNRFSLVGSVGIGAMAAAALL 144
BLAST of CSPI07G05780 vs. NCBI nr
Match: KAG6576849.1 (hypothetical protein SDJN03_24423, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 55.5 bits (132), Expect = 4.3e-04 Identity = 65/178 (36.52%), Postives = 85/178 (47.75%), Query Frame = 0 Query: 6 LLNALLAAALLFSAAAISPSPSPSPTPPASLSPPWRWAPITKPPTQP------------- 65 +LN + AA LL SAAA SP PSP+P+P SPPW+W P T+ P+ P Sbjct: 6 VLNVITAALLLISAAANSPLPSPAPSPE---SPPWKWTPDTESPSSPPEMEPPSPSVSPP 65
Query: 66 ---PTPSHETEPSTPP------------------------PSPTSVPPPAHHDEPPT--- 125 P PS +T P++PP PS T P PA PT Sbjct: 66 ELSPVPSSDT-PTSPPDANPPTLSPAALPPAVKSPVHAPSPSKTKAPAPAPSKMSPTPAR 125
Query: 126 -----AQPVSPSPSPTWIAEPPSEALSPSKAKSD--GFKNSFSVVGSVAIGAMAAAAL 134 A PVS P+P EPP+ +++P+ K+D G N F++ GSVA G MAAA + Sbjct: 126 APKSSAPPVSSPPAPNGEMEPPTPSVAPTAPKADNGGAANRFAIRGSVAFGLMAAALI 179
BLAST of CSPI07G05780 vs. NCBI nr
Match: KAG7014869.1 (hypothetical protein SDJN02_22499, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 55.5 bits (132), Expect = 4.3e-04 Identity = 65/178 (36.52%), Postives = 85/178 (47.75%), Query Frame = 0 Query: 6 LLNALLAAALLFSAAAISPSPSPSPTPPASLSPPWRWAPITKPPTQP------------- 65 +LN + AA LL SAAA SP PSP+P+P SPPW+W P T+ P+ P Sbjct: 6 VLNVITAALLLISAAANSPLPSPAPSPE---SPPWKWTPDTESPSSPPEMEPPSPSVSPP 65
Query: 66 ---PTPSHETEPSTPP------------------------PSPTSVPPPAHHDEPPT--- 125 P PS +T P++PP PS T P PA PT Sbjct: 66 ELSPVPSSDT-PTSPPDANPPTLSPAALPPAVKSPVHAPSPSKTKAPAPAPSKMSPTPAR 125
Query: 126 -----AQPVSPSPSPTWIAEPPSEALSPSKAKSD--GFKNSFSVVGSVAIGAMAAAAL 134 A PVS P+P EPP+ +++P+ K+D G N F++ GSVA G MAAA + Sbjct: 126 APKSSAPPVSSPPAPNGEMEPPTPSVAPTAPKADNGGAANRFAIGGSVAFGLMAAALI 179
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0K238 | 1.1e-58 | 98.51 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G064060 PE=4 SV=1 | [more] |
A0A6J1CJN4 | 1.1e-18 | 55.70 | extensin-like OS=Momordica charantia OX=3673 GN=LOC111012233 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
XP_011659717.1 | 2.3e-58 | 98.51 | vegetative cell wall protein gp1 [Cucumis sativus] >KGN43745.1 hypothetical prot... | [more] |
XP_038887113.1 | 8.5e-29 | 65.36 | anther-specific proline-rich protein APG-like [Benincasa hispida] | [more] |
XP_022141995.1 | 2.3e-18 | 55.70 | extensin-like [Momordica charantia] | [more] |
KAG6576849.1 | 4.3e-04 | 36.52 | hypothetical protein SDJN03_24423, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG7014869.1 | 4.3e-04 | 36.52 | hypothetical protein SDJN02_22499, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
Match Name | E-value | Identity | Description | |
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | PRINTS | PR01217 | PRICHEXTENSN | coord: 21..33 score: 46.15 coord: 77..93 score: 36.47 coord: 44..65 score: 52.73 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 25..95 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 22..114 |
Relationships
The following mRNA feature(s) are a part of this gene:
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