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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. ATGACCCTTCCAATTCCATATCTCTTCCCTATTTTTCTTCTATATAAACAAACACACTTCCGCTCCATCTTCTTCACAGCTCTACAAGAAAATAATTCCCAAAACACTAAAATTCCTCACACCCAAATGAAGAGCGGAAGCGATAGCAAGAACGAGCGCGGCGTCGATAACTCGACGAAAGTTAGTAGCAGTACTGAGGGGTCTAGAAAGACGATGGTTGCTCCTGGAAGTGATGGGAAGGAACATATCCTTCGAGATGAATTTGAGAATGACCCAAAACGTCATTTTGCTAACCTTCGTGCACATGAGAAGAATGAAAAAAGCAAGACTTAGTTATTATTATTATTATCGTTGTAGTAACCAAAATATGGGTTTATGAAATTATGGAGA mRNA sequence ATGACCCTTCCAATTCCATATCTCTTCCCTATTTTTCTTCTATATAAACAAACACACTTCCGCTCCATCTTCTTCACAGCTCTACAAGAAAATAATTCCCAAAACACTAAAATTCCTCACACCCAAATGAAGAGCGGAAGCGATAGCAAGAACGAGCGCGGCGTCGATAACTCGACGAAAGTTAGTAGCAGTACTGAGGGGTCTAGAAAGACGATGGTTGCTCCTGGAAGTGATGGGAAGGAACATATCCTTCGAGATGAATTTGAGAATGACCCAAAACGTCATTTTGCTAACCTTCGTGCACATGAGAAGAATGAAAAAAGCAAGACTTAGTTATTATTATTATTATCGTTGTAGTAACCAAAATATGGGTTTATGAAATTATGGAGA Coding sequence (CDS) ATGACCCTTCCAATTCCATATCTCTTCCCTATTTTTCTTCTATATAAACAAACACACTTCCGCTCCATCTTCTTCACAGCTCTACAAGAAAATAATTCCCAAAACACTAAAATTCCTCACACCCAAATGAAGAGCGGAAGCGATAGCAAGAACGAGCGCGGCGTCGATAACTCGACGAAAGTTAGTAGCAGTACTGAGGGGTCTAGAAAGACGATGGTTGCTCCTGGAAGTGATGGGAAGGAACATATCCTTCGAGATGAATTTGAGAATGACCCAAAACGTCATTTTGCTAACCTTCGTGCACATGAGAAGAATGAAAAAAGCAAGACTTAG Protein sequence MTLPIPYLFPIFLLYKQTHFRSIFFTALQENNSQNTKIPHTQMKSGSDSKNERGVDNSTKVSSSTEGSRKTMVAPGSDGKEHILRDEFENDPKRHFANLRAHEKNEKSKT*
Homology
BLAST of CSPI07G05460 vs. ExPASy TrEMBL
Match: A0A0A0K3Z8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G062750 PE=4 SV=1) HSP 1 Score: 210.7 bits (535), Expect = 3.1e-51 Identity = 109/110 (99.09%), Postives = 109/110 (99.09%), Query Frame = 0
Query: 1 MTLPIPYLFPIFLLYKQTHFRSIFFTALQENNSQNTKIPHTQMKSGSDSKNERGVDNSTK 60
MTLPIPYLFPIFLLYKQTHF SIFFTALQENNSQNTKIPHTQMKSGSDSKNERGVDNSTK
Sbjct: 1 MTLPIPYLFPIFLLYKQTHFLSIFFTALQENNSQNTKIPHTQMKSGSDSKNERGVDNSTK 60
Query: 61 VSSSTEGSRKTMVAPGSDGKEHILRDEFENDPKRHFANLRAHEKNEKSKT 111
VSSSTEGSRKTMVAPGSDGKEHILRDEFENDPKRHFANLRAHEKNEKSKT
Sbjct: 61 VSSSTEGSRKTMVAPGSDGKEHILRDEFENDPKRHFANLRAHEKNEKSKT 110
BLAST of CSPI07G05460 vs. NCBI nr
Match: KGN43709.1 (hypothetical protein Csa_017051 [Cucumis sativus]) HSP 1 Score: 210.7 bits (535), Expect = 6.5e-51 Identity = 109/110 (99.09%), Postives = 109/110 (99.09%), Query Frame = 0
Query: 1 MTLPIPYLFPIFLLYKQTHFRSIFFTALQENNSQNTKIPHTQMKSGSDSKNERGVDNSTK 60
MTLPIPYLFPIFLLYKQTHF SIFFTALQENNSQNTKIPHTQMKSGSDSKNERGVDNSTK
Sbjct: 1 MTLPIPYLFPIFLLYKQTHFLSIFFTALQENNSQNTKIPHTQMKSGSDSKNERGVDNSTK 60
Query: 61 VSSSTEGSRKTMVAPGSDGKEHILRDEFENDPKRHFANLRAHEKNEKSKT 111
VSSSTEGSRKTMVAPGSDGKEHILRDEFENDPKRHFANLRAHEKNEKSKT
Sbjct: 61 VSSSTEGSRKTMVAPGSDGKEHILRDEFENDPKRHFANLRAHEKNEKSKT 110
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0K3Z8 | 3.1e-51 | 99.09 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G062750 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KGN43709.1 | 6.5e-51 | 99.09 | hypothetical protein Csa_017051 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 31..110 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 56..71 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 31..45 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 75..110 |
Relationships
The following mRNA feature(s) are a part of this gene:
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