CSPI07G05080 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI07G05080
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Nuclear transcription factor Y subunit C
Location	Chr7: 3763396 .. 3766021 (+)
RNA-Seq Expression	CSPI07G05080
Synteny	CSPI07G05080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGAAAAGAGAGAAAGAAGTAGAGTACGATGCCGTTTTGTAGTGAAAAACGTCCCCTTCACCATTGCTCCTTCTTCCCCCACTCTCTCTCCGCCACTTGTACTCCGCCATAGCTCTCACACCTCGACACGTTTCTCTTTTATACCATTCCTCCTTCTTTCTCTCTCAAACACCTTCCTTCAACTCTCTCTCTCTCTCTTGATCCTTCTCTCTCTCTCTCTATCTCTCTGTCTCTCTCTTAGGGTTTCTGCTCTGCTTACTGATGAGCTTTGCTGCTCTTCTCCTTCTGCTTTGTTAATCAGAGGTGATCTCTTTTTTTCTTTTTCTTCTTGTTTTTGTTGTTTAATTACTGTTTTTGGAACATGGGTTTTGATTTTCATAAACTCTTTTCCCCTTTTGGTTTGATTCTGCTTTTATGGGGGTTTTGTTTGCTCTTTGGTGCATGAGATGAAAGCGATGGAATTTTTGCATGAAGAGACTTTGTTTCTTCTTTCTTTCTACTTAACTCTCTGCCTTATTTTGATTTAGGGAGATCAAGATTCCAATACCATTTGGTTTGTCTTGGTTTTCTGCTTTTTCCCACCATCGGATGATTTTCAAATTGAAATCCATGGCTAAGCGACTGATTCAATCAATCCAAGCTTTGGAAAATAATTCATGTGTCCGATTAAAGGTTCTGTTGGAGGGAGGGATTGGGAGTCCATAGATTTCATTTGTGGATAACTACTCTCTCTTTCACTTCCGATGAATTTCCTTAGCTCGAACTAGTTCTTTGATCAGTGTGTAGATTCACGTCTCAATTCTTTTTAATTGCTTTATTGAAGGCTGTTTGAAAGCGAGGTTTTTGCTCTTTTTTTCAGTACTTAATTGATTGATGCTGCCTGCAGCTTTTAATAGCTTTGTTAATAGTGTAATGTAAGTCTTTGGGAATAGAATCCTCCTTATTCCCTTAGATGATCAAAACTTTGAAGGTTCTTTAAGCATAATAAAAATGTTGAACTGCTTACTTTTGATGCGGCTTTTTGGTAATATTCTCTTTTCTTATTCTGTGTTTCTTTTTCTTTTCGAAGGAACAGAAATTTACTTCTTTTTGCTTTTTCTTGTTCTCAAAGATTTTAATTTTTCATTTTGCAAGTAAAACAACGATAAGCATCTTATTCTTATTTGTGTTTCTGAGAAATGGAAAATTGAAAGAAAAAAAGCGAAGTCGTTTGTTGTTTGAATTTGTATACAGTTAGAAGAACCTGTATTTGCTACTGATTCTGCTGAAACTTATAGGAATCTTCAATGGGAATGCTCTTTGGAACTGAGTTAGACTCTTCATAATGTTGATAGAATTTTGTGTTGTAATCAGCAGTGTGGAAAATACACCAAGTATTGTGAGCAATGGATCAATCGGAGCGTTCTCAGCATCAGCAACAATCACAGCAACCTGCAGGCGGTGTCGGTGCAGGCCAATTACAATATTCTAATCCTTACCAAACAGCTCCGATGGTGGCTTCCGGAACTCCTGCTATTACGATTCCCCCAACTCAACCACCATCCAGTTTCTCCAATTCTCCACACCAGCTTGCCTACCAGCAGGCTCAACACTTCCACCACCAGCAACAGCAGCAGCAACAACAACAGCTCCAAATGTTTTGGGCAAACCAAATGCAAGAGATTGAACAAACAACTGACTTTAAGAACCATAGTCTCCCTCTTGCTCGAATCAAGAAAATAATGAAAGCAGATGAAGATGTCCGAATGATTTCCGCTGAAGCACCGGTTATATTTGCAAAAGCATGTGAAATGTTCATCTTGGAGTTGACTCTGCGATCCTGGATTCACACAGAAGAGAACAAAAGGAGAACTTTACAGAAGAACGATATTGCAGCTGCAATTTCAAGGACAGATGTCTTTGATTTCTTGGTTGATATTATTCCAAGAGATGAACTGAAAGAGGAAGGCCTGGGAATCACAAAAGCCTCCCTTCCCGTAGTTGGTTCCCCAGCTGATCTTCCTTATTACTATGTCCCATCGCAGCATCCAGTGGGTGCTACAGGAATGATAATGGGGAAGCAATTAGATCAAGCGAACATGTACGGTGCCACTGCTCAACAGCCCCGACCATCGATGCCTTTCATGCCATGGCCGCATACCCAACCTCAGCAACAGCAACAAACTCAGCAGCAAAGTGATGGATAGTTAATAAGTAGTAGGTGGTTTCAAAACCGTGATGATATGATTTGATAGAGGCGATACTGAGTGACTTTGAATGTGTCTACTGTCTAGTTTAGTTCATAAAAGAATAGCTCTTGTAGAGAACTTGTCAATGATGACAAGTTGGAGTTGAGTTTGTATGATGAGAGGGTGTGTTTATCTCTTATTACTCTTAATTATCTATTACTGTAATGTACAACAGTGTATGTGGAATAGGTTCCAACTTTGCCCAAAAAAAACTATAATTTCAATTTTGTTGAGTTTTTTTTTAATTGTAATTTTAGGTTCAAGATGTGAAAGGATGAAGATTTTGAGCAAAATCTTGCAGGAAGTTGGCAGCGCTCACTCACTCTCCTTCCTTGGCTTATGATTTCTATTTCTTTGTTTGTATTAGGAGTGCACCAATTCGAATAAAATAACGGTTT

mRNA sequence

GAGAAAAGAGAGAAAGAAGTAGAGTACGATGCCGTTTTGTAGTGAAAAACGTCCCCTTCACCATTGCTCCTTCTTCCCCCACTCTCTCTCCGCCACTTGTACTCCGCCATAGCTCTCACACCTCGACACGTTTCTCTTTTATACCATTCCTCCTTCTTTCTCTCTCAAACACCTTCCTTCAACTCTCTCTCTCTCTCTTGATCCTTCTCTCTCTCTCTCTATCTCTCTGTCTCTCTCTTAGGGTTTCTGCTCTGCTTACTGATGAGCTTTGCTGCTCTTCTCCTTCTGCTTTGTTAATCAGAGGAATCTTCAATGGGAATGCTCTTTGGAACTGAGTTAGACTCTTCATAATGTTGATAGAATTTTGTGTTGTAATCAGCAGTGTGGAAAATACACCAAGTATTGTGAGCAATGGATCAATCGGAGCGTTCTCAGCATCAGCAACAATCACAGCAACCTGCAGGCGGTGTCGGTGCAGGCCAATTACAATATTCTAATCCTTACCAAACAGCTCCGATGGTGGCTTCCGGAACTCCTGCTATTACGATTCCCCCAACTCAACCACCATCCAGTTTCTCCAATTCTCCACACCAGCTTGCCTACCAGCAGGCTCAACACTTCCACCACCAGCAACAGCAGCAGCAACAACAACAGCTCCAAATGTTTTGGGCAAACCAAATGCAAGAGATTGAACAAACAACTGACTTTAAGAACCATAGTCTCCCTCTTGCTCGAATCAAGAAAATAATGAAAGCAGATGAAGATGTCCGAATGATTTCCGCTGAAGCACCGGTTATATTTGCAAAAGCATGTGAAATGTTCATCTTGGAGTTGACTCTGCGATCCTGGATTCACACAGAAGAGAACAAAAGGAGAACTTTACAGAAGAACGATATTGCAGCTGCAATTTCAAGGACAGATGTCTTTGATTTCTTGGTTGATATTATTCCAAGAGATGAACTGAAAGAGGAAGGCCTGGGAATCACAAAAGCCTCCCTTCCCGTAGTTGGTTCCCCAGCTGATCTTCCTTATTACTATGTCCCATCGCAGCATCCAGTGGGTGCTACAGGAATGATAATGGGGAAGCAATTAGATCAAGCGAACATGTACGGTGCCACTGCTCAACAGCCCCGACCATCGATGCCTTTCATGCCATGGCCGCATACCCAACCTCAGCAACAGCAACAAACTCAGCAGCAAAGTGATGGATAGTTAATAAGTAGTAGGTGGTTTCAAAACCGTGATGATATGATTTGATAGAGGCGATACTGAGTGACTTTGAATGTGTCTACTGTCTAGTTTAGTTCATAAAAGAATAGCTCTTGTAGAGAACTTGTCAATGATGACAAGTTGGAGTTGAGTTTGTATGATGAGAGGGTGTGTTTATCTCTTATTACTCTTAATTATCTATTACTGTAATGTACAACAGTGTATGTGGAATAGGTTCCAACTTTGCCCAAAAAAAACTATAATTTCAATTTTGTTGAGTTTTTTTTTAATTGTAATTTTAGGTTCAAGATGTGAAAGGATGAAGATTTTGAGCAAAATCTTGCAGGAAGTTGGCAGCGCTCACTCACTCTCCTTCCTTGGCTTATGATTTCTATTTCTTTGTTTGTATTAGGAGTGCACCAATTCGAATAAAATAACGGTTT

Coding sequence (CDS)

ATGGATCAATCGGAGCGTTCTCAGCATCAGCAACAATCACAGCAACCTGCAGGCGGTGTCGGTGCAGGCCAATTACAATATTCTAATCCTTACCAAACAGCTCCGATGGTGGCTTCCGGAACTCCTGCTATTACGATTCCCCCAACTCAACCACCATCCAGTTTCTCCAATTCTCCACACCAGCTTGCCTACCAGCAGGCTCAACACTTCCACCACCAGCAACAGCAGCAGCAACAACAACAGCTCCAAATGTTTTGGGCAAACCAAATGCAAGAGATTGAACAAACAACTGACTTTAAGAACCATAGTCTCCCTCTTGCTCGAATCAAGAAAATAATGAAAGCAGATGAAGATGTCCGAATGATTTCCGCTGAAGCACCGGTTATATTTGCAAAAGCATGTGAAATGTTCATCTTGGAGTTGACTCTGCGATCCTGGATTCACACAGAAGAGAACAAAAGGAGAACTTTACAGAAGAACGATATTGCAGCTGCAATTTCAAGGACAGATGTCTTTGATTTCTTGGTTGATATTATTCCAAGAGATGAACTGAAAGAGGAAGGCCTGGGAATCACAAAAGCCTCCCTTCCCGTAGTTGGTTCCCCAGCTGATCTTCCTTATTACTATGTCCCATCGCAGCATCCAGTGGGTGCTACAGGAATGATAATGGGGAAGCAATTAGATCAAGCGAACATGTACGGTGCCACTGCTCAACAGCCCCGACCATCGATGCCTTTCATGCCATGGCCGCATACCCAACCTCAGCAACAGCAACAAACTCAGCAGCAAAGTGATGGATAG

Protein sequence

MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASLPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQPRPSMPFMPWPHTQPQQQQQTQQQSDG*

Homology

[Close]

BLAST of CSPI07G05080 vs. ExPASy Swiss-Prot
Match: Q8LCG7 (Nuclear transcription factor Y subunit C-2 OS=Arabidopsis thaliana OX=3702 GN=NFYC2 PE=1 SV=2)

HSP 1 Score: 256.9 bits (655), Expect = 2.5e-67
Identity = 149/216 (68.98%), Postives = 162/216 (75.00%), Query Frame = 0


Query: 1   MDQSERSQHQQQSQQPAGGVGAGQLQYSNP--YQTAPMVASGTPAITIPPTQPPSSFSNS 60
           M+QSE  Q QQQ          G + Y  P  YQ+ P+                    N+
Sbjct: 1   MEQSEEGQQQQQQ---------GVMDYVPPHAYQSGPV--------------------NA 60

Query: 61  PHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADED 120
              +A+QQA HFHH  QQQQQQQLQMFWANQMQEIE TTDFKNH+LPLARIKKIMKADED
Sbjct: 61  ASHMAFQQAHHFHHHHQQQQQQQLQMFWANQMQEIEHTTDFKNHTLPLARIKKIMKADED 120

Query: 121 VRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDI 180
           VRMISAEAPVIFAKACEMFILELTLR+WIHTEENKRRTLQKNDIAAAISRTDVFDFLVDI
Sbjct: 121 VRMISAEAPVIFAKACEMFILELTLRAWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDI 180

Query: 181 IPRDELKEEGLGITKASLP-VVGSPADLPYYYVPSQ 214
           IPRDELKEEGLG+TK ++P VVGSP   PYYY+  Q
Sbjct: 181 IPRDELKEEGLGVTKGTIPSVVGSP---PYYYLQQQ 184

[Close]

BLAST of CSPI07G05080 vs. ExPASy Swiss-Prot
Match: Q655V5 (Nuclear transcription factor Y subunit C-4 OS=Oryza sativa subsp. japonica OX=39947 GN=NFYC4 PE=1 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 1.8e-65
Identity = 158/260 (60.77%), Postives = 182/260 (70.00%), Query Frame = 0


Query: 15  QPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSP------HQLAYQQAQ 74
           QPA GV AG  Q    Y+ A  V +  PA+    +QP  SF  +P      HQL YQQAQ
Sbjct: 8   QPAIGVVAGGSQVYPAYRPAATVPT-APAVIPAGSQPAPSFPANPDQLSAQHQLVYQQAQ 67

Query: 75  HFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPV 134
            FH Q QQQQQ+QLQ FWA ++ +IEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPV
Sbjct: 68  QFHQQLQQQQQRQLQQFWAERLVDIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPV 127

Query: 135 IFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEG 194
           IFAKACE+FILELTLRSW+HTEENKRRTLQKNDIAAAI+RTD++DFLVDI+PRD+LKEEG
Sbjct: 128 IFAKACEIFILELTLRSWMHTEENKRRTLQKNDIAAAITRTDMYDFLVDIVPRDDLKEEG 187

Query: 195 LGITKASLPVVGSPAD-LPY-YYVPSQHPVGATGMIMGKQLDQANMYGATAQQPRPSMPF 254
           +G+ +A LP +G PAD  PY YYVP Q   GA G+  G Q                  P 
Sbjct: 188 VGLPRAGLPPLGVPADSYPYGYYVPQQQVPGA-GIAYGGQ---------------QGHPG 247

Query: 255 MPWPHTQPQQQQ-QTQQQSD 266
             W   Q QQ++   +QQSD
Sbjct: 248 YLWQDPQEQQEEPPAEQQSD 250

[Close]

BLAST of CSPI07G05080 vs. ExPASy Swiss-Prot
Match: Q8L4B2 (Nuclear transcription factor Y subunit C-9 OS=Arabidopsis thaliana OX=3702 GN=NFYC9 PE=1 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 2.6e-56
Identity = 145/258 (56.20%), Postives = 175/258 (67.83%), Query Frame = 0


Query: 11  QQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHF 70
           QQ    +G +  G    +NPYQT PM    T A T+      +  +  P QLA+ Q    
Sbjct: 3   QQDHGQSGAMNYG----TNPYQTNPM---STTAATV------AGGAAQPGQLAFHQI--- 62

Query: 71  HHQQQQQQQ--QQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPV 130
            HQQQQQQQ  QQLQ FW NQ +EIE+TTDFKNHSLPLARIKKIMKADEDVRMISAEAPV
Sbjct: 63  -HQQQQQQQLAQQLQAFWENQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPV 122

Query: 131 IFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEG 190
           +FA+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E 
Sbjct: 123 VFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEV 182

Query: 191 LG-ITKASLPVVGSPADLPYYYVPS-QHPVGATGMIMGKQLDQANMYGATAQQPRPSMPF 250
           LG I + ++P   + A  PY Y+P+   P+G  GM+MG      N  GA      P  P+
Sbjct: 183 LGSIPRGTVPEAAA-AGYPYGYLPAGTAPIGNPGMVMG------NPGGA-----YPPNPY 231

Query: 251 MPWPHTQPQQQQQTQQQS 265
           M  P  Q Q   Q  Q++
Sbjct: 243 MGQPMWQQQAPDQPDQEN 231

[Close]

BLAST of CSPI07G05080 vs. ExPASy Swiss-Prot
Match: Q9SMP0 (Nuclear transcription factor Y subunit C-1 OS=Arabidopsis thaliana OX=3702 GN=NFYC1 PE=1 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 5.4e-54
Identity = 117/198 (59.09%), Postives = 140/198 (70.71%), Query Frame = 0


Query: 43  AITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNH 102
           A  IPP  P ++ S +    +Y       H   QQQQQQLQ+FW  Q QEIEQ  DFKNH
Sbjct: 12  AAGIPPPPPGTTISAAGGGASY-------HHLLQQQQQQLQLFWTYQRQEIEQVNDFKNH 71

Query: 103 SLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDI 162
            LPLARIKKIMKADEDVRMISAEAP++FAKACE+FILELT+RSW+H EENKRRTLQKNDI
Sbjct: 72  QLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDI 131

Query: 163 AAAISRTDVFDFLVDIIPRDELKEEGLGITKASLPVVGSPADLPYYYVPSQHPVGATGMI 222
           AAAI+RTD+FDFLVDI+PRDE+K+E   +    + V  + + +PYYY P   P G  GM+
Sbjct: 132 AAAITRTDIFDFLVDIVPRDEIKDEA-AVLGGGMVVAPTASGVPYYYPPMGQPAGPGGMM 191

Query: 223 MGKQLDQANMYGATAQQP 241
           +G+     N  G   Q P
Sbjct: 192 IGRPAMDPN--GVYVQPP 199

[Close]

BLAST of CSPI07G05080 vs. ExPASy Swiss-Prot
Match: Q9ZVL3 (Nuclear transcription factor Y subunit C-3 OS=Arabidopsis thaliana OX=3702 GN=NFYC3 PE=1 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 1.2e-53
Identity = 136/248 (54.84%), Postives = 155/248 (62.50%), Query Frame = 0


Query: 11  QQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHF 70
           QQ Q  A   G      SNPYQT  M            T P  S   + HQ+        
Sbjct: 3   QQGQSSAMNYG------SNPYQTNAMT-----------TTPTGSDHPAYHQI-------- 62

Query: 71  HHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIF 130
           H QQQQQ  QQLQ FW  Q +EIE+TTDFKNHSLPLARIKKIMKADEDVRMISAEAPV+F
Sbjct: 63  HQQQQQQLTQQLQSFWETQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVF 122

Query: 131 AKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG 190
           A+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG
Sbjct: 123 ARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEVLG 182

Query: 191 ITKASLPVVGSPADLPYYYV-PSQHPVGATGMIMGKQLDQANMYGATAQQPRPSMPFMPW 250
              A      + A  PY Y+ P   P+G  GM+MG            A  P P M    W
Sbjct: 183 GVGAE---AATAAGYPYGYLPPGTAPIGNPGMVMG---------NPGAYPPNPYMGQPMW 213

Query: 251 PHTQPQQQ 258
               P+QQ
Sbjct: 243 QQPGPEQQ 213

[Close]

BLAST of CSPI07G05080 vs. ExPASy TrEMBL
Match: A0A1S3C190 (nuclear transcription factor Y subunit C-2 OS=Cucumis melo OX=3656 GN=LOC103495470 PE=4 SV=1)

HSP 1 Score: 512.7 bits (1319), Expect = 9.3e-142
Identity = 266/266 (100.00%), Postives = 266/266 (100.00%), Query Frame = 0


Query: 1   MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPH 60
           MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPH
Sbjct: 1   MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPH 60

Query: 61  QLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120
           QLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  QLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180
           MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP
Sbjct: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180

Query: 181 RDELKEEGLGITKASLPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQP 240
           RDELKEEGLGITKASLPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQP
Sbjct: 181 RDELKEEGLGITKASLPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQP 240

Query: 241 RPSMPFMPWPHTQPQQQQQTQQQSDG 267
           RPSMPFMPWPHTQPQQQQQTQQQSDG
Sbjct: 241 RPSMPFMPWPHTQPQQQQQTQQQSDG 266

[Close]

BLAST of CSPI07G05080 vs. ExPASy TrEMBL
Match: A0A5A7SLP2 (Nuclear transcription factor Y subunit C-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G002960 PE=4 SV=1)

HSP 1 Score: 512.7 bits (1319), Expect = 9.3e-142
Identity = 266/266 (100.00%), Postives = 266/266 (100.00%), Query Frame = 0


Query: 1   MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPH 60
           MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPH
Sbjct: 1   MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPH 60

Query: 61  QLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120
           QLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  QLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180
           MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP
Sbjct: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180

Query: 181 RDELKEEGLGITKASLPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQP 240
           RDELKEEGLGITKASLPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQP
Sbjct: 181 RDELKEEGLGITKASLPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQP 240

Query: 241 RPSMPFMPWPHTQPQQQQQTQQQSDG 267
           RPSMPFMPWPHTQPQQQQQTQQQSDG
Sbjct: 241 RPSMPFMPWPHTQPQQQQQTQQQSDG 266

[Close]

BLAST of CSPI07G05080 vs. ExPASy TrEMBL
Match: A0A0A0K5U1 (Histone domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G051420 PE=4 SV=1)

HSP 1 Score: 512.7 bits (1319), Expect = 9.3e-142
Identity = 266/266 (100.00%), Postives = 266/266 (100.00%), Query Frame = 0


Query: 1   MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPH 60
           MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPH
Sbjct: 1   MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPH 60

Query: 61  QLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120
           QLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  QLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180
           MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP
Sbjct: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180

Query: 181 RDELKEEGLGITKASLPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQP 240
           RDELKEEGLGITKASLPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQP
Sbjct: 181 RDELKEEGLGITKASLPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQP 240

Query: 241 RPSMPFMPWPHTQPQQQQQTQQQSDG 267
           RPSMPFMPWPHTQPQQQQQTQQQSDG
Sbjct: 241 RPSMPFMPWPHTQPQQQQQTQQQSDG 266

[Close]

BLAST of CSPI07G05080 vs. ExPASy TrEMBL
Match: A0A6J1DV19 (nuclear transcription factor Y subunit C-2 OS=Momordica charantia OX=3673 GN=LOC111024312 PE=4 SV=1)

HSP 1 Score: 490.0 bits (1260), Expect = 6.5e-135
Identity = 255/265 (96.23%), Postives = 257/265 (96.98%), Query Frame = 0


Query: 1   MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPH 60
           MDQSERSQHQQQSQQPAGGVGAGQL YSNPY+T  MVASGTPAITIPPTQPPSSFSNSPH
Sbjct: 1   MDQSERSQHQQQSQQPAGGVGAGQLPYSNPYETNLMVASGTPAITIPPTQPPSSFSNSPH 60

Query: 61  QLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120
           QLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  QLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180
           MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP
Sbjct: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180

Query: 181 RDELKEEGLGITKASLPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQP 240
           RDELKEEGLGITKAS+PVVGSPADLPYYYVP QHPV A GMIMGKQLDQANMYG TAQQP
Sbjct: 181 RDELKEEGLGITKASIPVVGSPADLPYYYVPPQHPVAAPGMIMGKQLDQANMYGGTAQQP 240

Query: 241 RPSMPFMPWPHTQPQQQQQTQQQSD 266
           RP MPFMPWPHTQPQQQQQTQQQSD
Sbjct: 241 RPPMPFMPWPHTQPQQQQQTQQQSD 265

[Close]

BLAST of CSPI07G05080 vs. ExPASy TrEMBL
Match: A0A6J1JII4 (nuclear transcription factor Y subunit C-2-like OS=Cucurbita maxima OX=3661 GN=LOC111486109 PE=4 SV=1)

HSP 1 Score: 479.6 bits (1233), Expect = 8.7e-132
Identity = 254/268 (94.78%), Postives = 257/268 (95.90%), Query Frame = 0


Query: 1   MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPH 60
           MDQSERSQHQQQSQQ AGGVGAGQL YSNPYQTAPM ASGTPAITIPPTQ PSSFSNSPH
Sbjct: 1   MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPH 60

Query: 61  QLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120
           QLA+QQAQHFH QQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  QLAFQQAQHFHQQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180
           MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP
Sbjct: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180

Query: 181 RDELKEEGLGITKASLPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQP 240
           RDELKEEGLGITKAS+PVVGSPADLPYYYVPSQHPV ATGMIMGKQLDQANMYGATAQQP
Sbjct: 181 RDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVSATGMIMGKQLDQANMYGATAQQP 240

Query: 241 RPSMPFMPWPHT---QPQQQQQTQQQSD 266
           RP +PFMPWPHT   Q QQQQQTQQQSD
Sbjct: 241 RPPIPFMPWPHTQAQQQQQQQQTQQQSD 268

[Close]

BLAST of CSPI07G05080 vs. NCBI nr
Match: XP_004136852.1 (nuclear transcription factor Y subunit C-2 [Cucumis sativus] >XP_008455266.1 PREDICTED: nuclear transcription factor Y subunit C-2 [Cucumis melo] >XP_008455267.1 PREDICTED: nuclear transcription factor Y subunit C-2 [Cucumis melo] >XP_011658757.1 nuclear transcription factor Y subunit C-2 [Cucumis sativus] >XP_016901763.1 PREDICTED: nuclear transcription factor Y subunit C-2 [Cucumis melo] >XP_031744926.1 nuclear transcription factor Y subunit C-2 [Cucumis sativus] >KAA0031528.1 nuclear transcription factor Y subunit C-2 [Cucumis melo var. makuwa] >KGN43662.1 hypothetical protein Csa_017325 [Cucumis sativus] >TYK06981.1 nuclear transcription factor Y subunit C-2 [Cucumis melo var. makuwa])

HSP 1 Score: 512.7 bits (1319), Expect = 1.9e-141
Identity = 266/266 (100.00%), Postives = 266/266 (100.00%), Query Frame = 0


Query: 1   MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPH 60
           MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPH
Sbjct: 1   MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPH 60

Query: 61  QLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120
           QLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  QLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180
           MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP
Sbjct: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180

Query: 181 RDELKEEGLGITKASLPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQP 240
           RDELKEEGLGITKASLPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQP
Sbjct: 181 RDELKEEGLGITKASLPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQP 240

Query: 241 RPSMPFMPWPHTQPQQQQQTQQQSDG 267
           RPSMPFMPWPHTQPQQQQQTQQQSDG
Sbjct: 241 RPSMPFMPWPHTQPQQQQQTQQQSDG 266

[Close]

BLAST of CSPI07G05080 vs. NCBI nr
Match: XP_038888434.1 (nuclear transcription factor Y subunit C-2-like [Benincasa hispida] >XP_038888435.1 nuclear transcription factor Y subunit C-2-like [Benincasa hispida] >XP_038888436.1 nuclear transcription factor Y subunit C-2-like [Benincasa hispida] >XP_038888437.1 nuclear transcription factor Y subunit C-2-like [Benincasa hispida])

HSP 1 Score: 500.0 bits (1286), Expect = 1.3e-137
Identity = 259/265 (97.74%), Postives = 260/265 (98.11%), Query Frame = 0


Query: 1   MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPH 60
           MDQSERSQH QQSQQPAG VGAGQL YSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPH
Sbjct: 1   MDQSERSQHHQQSQQPAGSVGAGQLPYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPH 60

Query: 61  QLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120
           QLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  QLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180
           MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP
Sbjct: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180

Query: 181 RDELKEEGLGITKASLPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQP 240
           RDELKEEGLGITKAS+PVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQ NMYG TAQQP
Sbjct: 181 RDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQVNMYGGTAQQP 240

Query: 241 RPSMPFMPWPHTQPQQQQQTQQQSD 266
           RPSMPFMPWPHTQPQQQQQTQQQSD
Sbjct: 241 RPSMPFMPWPHTQPQQQQQTQQQSD 265

[Close]

BLAST of CSPI07G05080 vs. NCBI nr
Match: XP_022157652.1 (nuclear transcription factor Y subunit C-2 [Momordica charantia] >XP_022157653.1 nuclear transcription factor Y subunit C-2 [Momordica charantia] >XP_022157654.1 nuclear transcription factor Y subunit C-2 [Momordica charantia] >XP_022157655.1 nuclear transcription factor Y subunit C-2 [Momordica charantia])

HSP 1 Score: 490.0 bits (1260), Expect = 1.3e-134
Identity = 255/265 (96.23%), Postives = 257/265 (96.98%), Query Frame = 0


Query: 1   MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPH 60
           MDQSERSQHQQQSQQPAGGVGAGQL YSNPY+T  MVASGTPAITIPPTQPPSSFSNSPH
Sbjct: 1   MDQSERSQHQQQSQQPAGGVGAGQLPYSNPYETNLMVASGTPAITIPPTQPPSSFSNSPH 60

Query: 61  QLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120
           QLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  QLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180
           MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP
Sbjct: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180

Query: 181 RDELKEEGLGITKASLPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQP 240
           RDELKEEGLGITKAS+PVVGSPADLPYYYVP QHPV A GMIMGKQLDQANMYG TAQQP
Sbjct: 181 RDELKEEGLGITKASIPVVGSPADLPYYYVPPQHPVAAPGMIMGKQLDQANMYGGTAQQP 240

Query: 241 RPSMPFMPWPHTQPQQQQQTQQQSD 266
           RP MPFMPWPHTQPQQQQQTQQQSD
Sbjct: 241 RPPMPFMPWPHTQPQQQQQTQQQSD 265

[Close]

BLAST of CSPI07G05080 vs. NCBI nr
Match: XP_022988890.1 (nuclear transcription factor Y subunit C-2-like [Cucurbita maxima] >XP_022988891.1 nuclear transcription factor Y subunit C-2-like [Cucurbita maxima])

HSP 1 Score: 479.6 bits (1233), Expect = 1.8e-131
Identity = 254/268 (94.78%), Postives = 257/268 (95.90%), Query Frame = 0


Query: 1   MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPH 60
           MDQSERSQHQQQSQQ AGGVGAGQL YSNPYQTAPM ASGTPAITIPPTQ PSSFSNSPH
Sbjct: 1   MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPH 60

Query: 61  QLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120
           QLA+QQAQHFH QQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  QLAFQQAQHFHQQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180
           MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP
Sbjct: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180

Query: 181 RDELKEEGLGITKASLPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQP 240
           RDELKEEGLGITKAS+PVVGSPADLPYYYVPSQHPV ATGMIMGKQLDQANMYGATAQQP
Sbjct: 181 RDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVSATGMIMGKQLDQANMYGATAQQP 240

Query: 241 RPSMPFMPWPHT---QPQQQQQTQQQSD 266
           RP +PFMPWPHT   Q QQQQQTQQQSD
Sbjct: 241 RPPIPFMPWPHTQAQQQQQQQQTQQQSD 268

[Close]

BLAST of CSPI07G05080 vs. NCBI nr
Match: XP_022927856.1 (nuclear transcription factor Y subunit C-2-like [Cucurbita moschata] >XP_022927857.1 nuclear transcription factor Y subunit C-2-like [Cucurbita moschata] >KAG7022566.1 Nuclear transcription factor Y subunit C-2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 478.0 bits (1229), Expect = 5.3e-131
Identity = 253/268 (94.40%), Postives = 257/268 (95.90%), Query Frame = 0


Query: 1   MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPH 60
           MDQSERSQHQQQSQQ AGGVGAGQL YSNPYQTAPM ASGTPAITIPPTQ PSSFSNSPH
Sbjct: 1   MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPH 60

Query: 61  QLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120
           QLA+QQAQHFH QQQQQQQQQLQ+FWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  QLAFQQAQHFHQQQQQQQQQQLQVFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180
           MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP
Sbjct: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180

Query: 181 RDELKEEGLGITKASLPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQP 240
           RDELKEEGLGITKAS+PVVGSPADLPYYYVPSQHPV ATGMIMGKQLDQANMYGATAQQP
Sbjct: 181 RDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVSATGMIMGKQLDQANMYGATAQQP 240

Query: 241 RPSMPFMPWPHT---QPQQQQQTQQQSD 266
           RP +PFMPWPHT   Q QQQQQTQQQSD
Sbjct: 241 RPPIPFMPWPHTQAQQQQQQQQTQQQSD 268

[Close]

BLAST of CSPI07G05080 vs. TAIR 10
Match: AT1G56170.1 (nuclear factor Y, subunit C2 )

HSP 1 Score: 256.9 bits (655), Expect = 1.8e-68
Identity = 149/216 (68.98%), Postives = 162/216 (75.00%), Query Frame = 0


Query: 1   MDQSERSQHQQQSQQPAGGVGAGQLQYSNP--YQTAPMVASGTPAITIPPTQPPSSFSNS 60
           M+QSE  Q QQQ          G + Y  P  YQ+ P+                    N+
Sbjct: 1   MEQSEEGQQQQQQ---------GVMDYVPPHAYQSGPV--------------------NA 60

Query: 61  PHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADED 120
              +A+QQA HFHH  QQQQQQQLQMFWANQMQEIE TTDFKNH+LPLARIKKIMKADED
Sbjct: 61  ASHMAFQQAHHFHHHHQQQQQQQLQMFWANQMQEIEHTTDFKNHTLPLARIKKIMKADED 120

Query: 121 VRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDI 180
           VRMISAEAPVIFAKACEMFILELTLR+WIHTEENKRRTLQKNDIAAAISRTDVFDFLVDI
Sbjct: 121 VRMISAEAPVIFAKACEMFILELTLRAWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDI 180

Query: 181 IPRDELKEEGLGITKASLP-VVGSPADLPYYYVPSQ 214
           IPRDELKEEGLG+TK ++P VVGSP   PYYY+  Q
Sbjct: 181 IPRDELKEEGLGVTKGTIPSVVGSP---PYYYLQQQ 184

[Close]

BLAST of CSPI07G05080 vs. TAIR 10
Match: AT1G56170.2 (nuclear factor Y, subunit C2 )

HSP 1 Score: 256.9 bits (655), Expect = 1.8e-68
Identity = 149/216 (68.98%), Postives = 162/216 (75.00%), Query Frame = 0


Query: 1   MDQSERSQHQQQSQQPAGGVGAGQLQYSNP--YQTAPMVASGTPAITIPPTQPPSSFSNS 60
           M+QSE  Q QQQ          G + Y  P  YQ+ P+                    N+
Sbjct: 1   MEQSEEGQQQQQQ---------GVMDYVPPHAYQSGPV--------------------NA 60

Query: 61  PHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADED 120
              +A+QQA HFHH  QQQQQQQLQMFWANQMQEIE TTDFKNH+LPLARIKKIMKADED
Sbjct: 61  ASHMAFQQAHHFHHHHQQQQQQQLQMFWANQMQEIEHTTDFKNHTLPLARIKKIMKADED 120

Query: 121 VRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDI 180
           VRMISAEAPVIFAKACEMFILELTLR+WIHTEENKRRTLQKNDIAAAISRTDVFDFLVDI
Sbjct: 121 VRMISAEAPVIFAKACEMFILELTLRAWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDI 180

Query: 181 IPRDELKEEGLGITKASLP-VVGSPADLPYYYVPSQ 214
           IPRDELKEEGLG+TK ++P VVGSP   PYYY+  Q
Sbjct: 181 IPRDELKEEGLGVTKGTIPSVVGSP---PYYYLQQQ 184

[Close]

BLAST of CSPI07G05080 vs. TAIR 10
Match: AT1G08970.4 (nuclear factor Y, subunit C9 )

HSP 1 Score: 220.3 bits (560), Expect = 1.8e-57
Identity = 145/258 (56.20%), Postives = 175/258 (67.83%), Query Frame = 0


Query: 11  QQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHF 70
           QQ    +G +  G    +NPYQT PM    T A T+      +  +  P QLA+ Q    
Sbjct: 3   QQDHGQSGAMNYG----TNPYQTNPM---STTAATV------AGGAAQPGQLAFHQI--- 62

Query: 71  HHQQQQQQQ--QQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPV 130
            HQQQQQQQ  QQLQ FW NQ +EIE+TTDFKNHSLPLARIKKIMKADEDVRMISAEAPV
Sbjct: 63  -HQQQQQQQLAQQLQAFWENQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPV 122

Query: 131 IFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEG 190
           +FA+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E 
Sbjct: 123 VFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEV 182

Query: 191 LG-ITKASLPVVGSPADLPYYYVPS-QHPVGATGMIMGKQLDQANMYGATAQQPRPSMPF 250
           LG I + ++P   + A  PY Y+P+   P+G  GM+MG      N  GA      P  P+
Sbjct: 183 LGSIPRGTVPEAAA-AGYPYGYLPAGTAPIGNPGMVMG------NPGGA-----YPPNPY 231

Query: 251 MPWPHTQPQQQQQTQQQS 265
           M  P  Q Q   Q  Q++
Sbjct: 243 MGQPMWQQQAPDQPDQEN 231

[Close]

BLAST of CSPI07G05080 vs. TAIR 10
Match: AT1G08970.1 (nuclear factor Y, subunit C9 )

HSP 1 Score: 220.3 bits (560), Expect = 1.8e-57
Identity = 145/258 (56.20%), Postives = 175/258 (67.83%), Query Frame = 0


Query: 11  QQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHF 70
           QQ    +G +  G    +NPYQT PM    T A T+      +  +  P QLA+ Q    
Sbjct: 3   QQDHGQSGAMNYG----TNPYQTNPM---STTAATV------AGGAAQPGQLAFHQI--- 62

Query: 71  HHQQQQQQQ--QQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPV 130
            HQQQQQQQ  QQLQ FW NQ +EIE+TTDFKNHSLPLARIKKIMKADEDVRMISAEAPV
Sbjct: 63  -HQQQQQQQLAQQLQAFWENQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPV 122

Query: 131 IFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEG 190
           +FA+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E 
Sbjct: 123 VFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEV 182

Query: 191 LG-ITKASLPVVGSPADLPYYYVPS-QHPVGATGMIMGKQLDQANMYGATAQQPRPSMPF 250
           LG I + ++P   + A  PY Y+P+   P+G  GM+MG      N  GA      P  P+
Sbjct: 183 LGSIPRGTVPEAAA-AGYPYGYLPAGTAPIGNPGMVMG------NPGGA-----YPPNPY 231

Query: 251 MPWPHTQPQQQQQTQQQS 265
           M  P  Q Q   Q  Q++
Sbjct: 243 MGQPMWQQQAPDQPDQEN 231

[Close]

BLAST of CSPI07G05080 vs. TAIR 10
Match: AT1G08970.3 (nuclear factor Y, subunit C9 )

HSP 1 Score: 220.3 bits (560), Expect = 1.8e-57
Identity = 145/258 (56.20%), Postives = 175/258 (67.83%), Query Frame = 0


Query: 11  QQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHF 70
           QQ    +G +  G    +NPYQT PM    T A T+      +  +  P QLA+ Q    
Sbjct: 3   QQDHGQSGAMNYG----TNPYQTNPM---STTAATV------AGGAAQPGQLAFHQI--- 62

Query: 71  HHQQQQQQQ--QQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPV 130
            HQQQQQQQ  QQLQ FW NQ +EIE+TTDFKNHSLPLARIKKIMKADEDVRMISAEAPV
Sbjct: 63  -HQQQQQQQLAQQLQAFWENQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPV 122

Query: 131 IFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEG 190
           +FA+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E 
Sbjct: 123 VFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEV 182

Query: 191 LG-ITKASLPVVGSPADLPYYYVPS-QHPVGATGMIMGKQLDQANMYGATAQQPRPSMPF 250
           LG I + ++P   + A  PY Y+P+   P+G  GM+MG      N  GA      P  P+
Sbjct: 183 LGSIPRGTVPEAAA-AGYPYGYLPAGTAPIGNPGMVMG------NPGGA-----YPPNPY 231

Query: 251 MPWPHTQPQQQQQTQQQS 265
           M  P  Q Q   Q  Q++
Sbjct: 243 MGQPMWQQQAPDQPDQEN 231

The following BLAST results are available for this feature:

BLAST of CSPI07G05080 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LCG7	2.5e-67	68.98	Nuclear transcription factor Y subunit C-2 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q655V5	1.8e-65	60.77	Nuclear transcription factor Y subunit C-4 OS=Oryza sativa subsp. japonica OX=39...	[more]
Q8L4B2	2.6e-56	56.20	Nuclear transcription factor Y subunit C-9 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q9SMP0	5.4e-54	59.09	Nuclear transcription factor Y subunit C-1 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q9ZVL3	1.2e-53	54.84	Nuclear transcription factor Y subunit C-3 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]

BLAST of CSPI07G05080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C190	9.3e-142	100.00	nuclear transcription factor Y subunit C-2 OS=Cucumis melo OX=3656 GN=LOC1034954...	[more]
A0A5A7SLP2	9.3e-142	100.00	Nuclear transcription factor Y subunit C-2 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A0A0K5U1	9.3e-142	100.00	Histone domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G051420 PE=...	[more]
A0A6J1DV19	6.5e-135	96.23	nuclear transcription factor Y subunit C-2 OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A6J1JII4	8.7e-132	94.78	nuclear transcription factor Y subunit C-2-like OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of CSPI07G05080 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136852.1	1.9e-141	100.00	nuclear transcription factor Y subunit C-2 [Cucumis sativus] >XP_008455266.1 PRE...	[more]
XP_038888434.1	1.3e-137	97.74	nuclear transcription factor Y subunit C-2-like [Benincasa hispida] >XP_03888843...	[more]
XP_022157652.1	1.3e-134	96.23	nuclear transcription factor Y subunit C-2 [Momordica charantia] >XP_022157653.1...	[more]
XP_022988890.1	1.8e-131	94.78	nuclear transcription factor Y subunit C-2-like [Cucurbita maxima] >XP_022988891...	[more]
XP_022927856.1	5.3e-131	94.40	nuclear transcription factor Y subunit C-2-like [Cucurbita moschata] >XP_0229278...	[more]

BLAST of CSPI07G05080 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G56170.1	1.8e-68	68.98	nuclear factor Y, subunit C2	[more]
AT1G56170.2	1.8e-68	68.98	nuclear factor Y, subunit C2	[more]
AT1G08970.4	1.8e-57	56.20	nuclear factor Y, subunit C9	[more]
AT1G08970.1	1.8e-57	56.20	nuclear factor Y, subunit C9	[more]
AT1G08970.3	1.8e-57	56.20	nuclear factor Y, subunit C9	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 64..181 e-value: 2.8E-48 score: 165.0
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 59..175
IPR007125	Histone H2A/H2B/H3	PFAM	PF00125	Histone	coord: 57..166 e-value: 5.9E-18 score: 65.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..39
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 237..266
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 250..266
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..59
None	No IPR available	PANTHER	PTHR10252	HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED	coord: 9..260
None	No IPR available	PANTHER	PTHR10252:SF117	NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-9	coord: 9..260

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI07G05080.2	CSPI07G05080.2	mRNA
CSPI07G05080.1	CSPI07G05080.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific
molecular_function	GO:0046982	protein heterodimerization activity