CSPI07G04430 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI07G04430
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr7: 3344653 .. 3344820 (+)
RNA-Seq ExpressionCSPI07G04430
SyntenyCSPI07G04430
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCACGTGCTACCAAACACGTGTAAGCACAGAAATTCGTCGTTCAGTCATTCACGTGGCCTCTGCGAACGACACATCGAAAAGGCCACGTAGGCAACGTCAGGGGGACCACATCGCCAACGTGGGCATGGAAGTCTCGCCATGTGGCGGTCTTGTGGAGGTATGA

mRNA sequence

ATGGGCACGTGCTACCAAACACGTGTAAGCACAGAAATTCGTCGTTCAGTCATTCACGTGGCCTCTGCGAACGACACATCGAAAAGGCCACGTAGGCAACGTCAGGGGGACCACATCGCCAACGTGGGCATGGAAGTCTCGCCATGTGGCGGTCTTGTGGAGGTATGA

Coding sequence (CDS)

ATGGGCACGTGCTACCAAACACGTGTAAGCACAGAAATTCGTCGTTCAGTCATTCACGTGGCCTCTGCGAACGACACATCGAAAAGGCCACGTAGGCAACGTCAGGGGGACCACATCGCCAACGTGGGCATGGAAGTCTCGCCATGTGGCGGTCTTGTGGAGGTATGA

Protein sequence

MGTCYQTRVSTEIRRSVIHVASANDTSKRPRRQRQGDHIANVGMEVSPCGGLVEV*
Homology
[Close]
BLAST of CSPI07G04430 vs. ExPASy TrEMBL
Match: A0A0A0K3Q5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G047300 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.1e-20
Identity = 51/52 (98.08%), Postives = 52/52 (100.00%), Query Frame = 0 

Query: 1  MGTCYQTRVSTEIRRSVIHVASANDTSKRPRRQRQGDHIANVGMEVSPCGGL 53
          MGTCYQTRVSTEIRRSVIHVASANDTSKRPRRQRQGDHIANVGMEVSPCGG+
Sbjct: 1  MGTCYQTRVSTEIRRSVIHVASANDTSKRPRRQRQGDHIANVGMEVSPCGGV 52

[Close]
BLAST of CSPI07G04430 vs. NCBI nr
Match: KAE8645766.1 (hypothetical protein Csa_020171 [Cucumis sativus])

HSP 1 Score: 76.6 bits (187), Expect = 7.4e-11
Identity = 35/36 (97.22%), Postives = 36/36 (100.00%), Query Frame = 0 

Query: 17 VIHVASANDTSKRPRRQRQGDHIANVGMEVSPCGGL 53
          VIHVASANDTSKRPRRQRQGDHIANVGMEVSPCGG+
Sbjct: 33 VIHVASANDTSKRPRRQRQGDHIANVGMEVSPCGGV 68

The following BLAST results are available for this feature:
BLAST of CSPI07G04430 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI07G04430 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K3Q51.1e-2098.08Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G047300 PE=4 SV=1[more]
BLAST of CSPI07G04430 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8645766.17.4e-1197.22hypothetical protein Csa_020171 [Cucumis sativus][more]
BLAST of CSPI07G04430 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G04430.1CSPI07G04430.1mRNA