CSPI07G02370 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI07G02370
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Mitochondrial transcription termination factor family protein
Location	Chr7: 2046605 .. 2048501 (-)
RNA-Seq Expression	CSPI07G02370
Synteny	CSPI07G02370

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTTTCAATTTGCCAAGAAAATGCTCTCTCAACTCTCAACTTATCCATTTCGTTCAAAATTAAACAAAACTGCTTCGTCTTGCAAAGCTCAACACTGAAACTTTTTGCTCTATGTTCTTCTTGCAAGGCCCAGAAATCCTGTTTCTGTAATTCCAATTACCTCAAATTTCCCTCACAACTAGAATTTTGATCGAGCCAGAAAACAATAAAGACTTCCTGTTTATCCATCAGATTTGAAGAAGGTGAACCCAATTTTTTATTGTGTTTATTATCGCCATTCTGCACTGCGTTTCTCTTTTTAATTTGAAGGGTTTCTGAATTTAGAGTTCAATTCCAATTTCCTTTAATAAAACTTGCATTACTTGTTTGTTCTTGCATTGTCATTTCTGCAAACACTTGGTGGGATTATGAAAATTCTGTTTGTATGCTGAATCTTTCAGGGTTTATGGAAAGTAGCGCCAGTCGAAATGGTAATTGCATGCTGTGGTTCTTCAGGGATAAAGGTTTTGATGATAGAAGTATTGATAAGATGTTTAGAAAGTGTAGGCGTTTAGAAGATATGCAGAATGAAAGAGCTTCTGAAAACTGGGAATATTTGGAAAGAATTGGGATTCAAAAGAGGAAACTCCCTTCTGTTGTTTCCAAATGCCCTAAGATTTTAGCTCTTGGTCTTCAAGAGAAACTCGTTCCCATGGTTGAGTGCCTTGCAACACTCAGCACCAAGCCTCATGAAATAGCTGCAGCTATTGCTAAATTTCCTGGTATTCTTTCCTATAGTGTTGAAGAGAAGCTATGCCCACTTTTGGCGTTCTTTCAAGCATTGGGTGTCCCTGAAAAGCAACTTGGAAAGATGATTCTACTCAACCCGAGGCTTATTAGTTACAGCATTGAATCGAAACTCGTTGAAACTGTAGATTTTCTTGCTGGAGTTGGGCTAACGAAGGAGGGGGTGATTGGAAAAGTTCTTGCCAAAAATCCATTTCTCATGGGTTATAGTGTTGATAAAAGGCTCCGCCCGACTGTGGAGTTTCTGAAATCAATCGGTCTAAACAAGATGGATCTTCAAGCAGTTGCACTGAAATTTCCAGATATTTTGTGTAGGGACGTGGACAAAGTTTTGAGATATAATTTAGATTATCTAAGGAGCCGTGGGTTTAAAGATGGAGAAATAGTGTCTTTGGTGACTGGTTATCCTCCTGTTTTGATCAAGAGCATTCAACATTCTTTAGAACCTCGGATCAGATTTTTGGTCGAAATAATGGGAAGAAAACTTGAGGAAGTTGCTGAATATCCTGACTTTTTTAAGCATGGTTTGAAGAAAAAACTTGAGCTGCGGCATAGATTGTTGAAAGAGAAGAACGTTGACTTTGCCTTGAGTGAATTGTTGGAATGCAATCAAAAGAAGTTTATGATGAAAATGGGTTTGTTATGAGGCTATGCCTGGAGTTTTAGGTCTTCATATCCTGAAAGAACGTTGTTTTCTCAACATCTTTATAAGTTTTGTTGCCTAATTTTAGTTTTCCGGATTTCTAGTTAAAAGTGAAGAGCATTCGTCTTGCCAAGCAGCTGCCTTTAGGCCTGGATCATTCTTGTCCTCCATTCATGCTTCATGCTTTAGGCTCTTAATGGTTTCCCTTGTGTTTTAACAATTTGAATGGAGTGGAGTACATACAAATTACCCTCTTGTAAACTCCTTGCTCTATTTTGTATAGGTAGAGATTTGAAACCTCTGGTCCTCTCTTGTAGTTTTCTTCTTTAATGTTAAGATTTTTTTGGTGCTAGAATGTGTACTCTTCTTGGACTCATTGTTCTTAACAGTTACAACGGATTGTTGGGTTTTTTTTGCTTATGGGGTAGCATCTCTTGAAAAATCAAAAGATGTTTTTTACTTGGAGA

mRNA sequence

TTTTTTCAATTTGCCAAGAAAATGCTCTCTCAACTCTCAACTTATCCATTTCGTTCAAAATTAAACAAAACTGCTTCGTCTTGCAAAGCTCAACACTGAAACTTTTTGCTCTATGTTCTTCTTGCAAGGCCCAGAAATCCTGTTTCTGTAATTCCAATTACCTCAAATTTCCCTCACAACTAGAATTTTGATCGAGCCAGAAAACAATAAAGACTTCCTGTTTATCCATCAGATTTGAAGAAGGGTTTATGGAAAGTAGCGCCAGTCGAAATGGTAATTGCATGCTGTGGTTCTTCAGGGATAAAGGTTTTGATGATAGAAGTATTGATAAGATGTTTAGAAAGTGTAGGCGTTTAGAAGATATGCAGAATGAAAGAGCTTCTGAAAACTGGGAATATTTGGAAAGAATTGGGATTCAAAAGAGGAAACTCCCTTCTGTTGTTTCCAAATGCCCTAAGATTTTAGCTCTTGGTCTTCAAGAGAAACTCGTTCCCATGGTTGAGTGCCTTGCAACACTCAGCACCAAGCCTCATGAAATAGCTGCAGCTATTGCTAAATTTCCTGGTATTCTTTCCTATAGTGTTGAAGAGAAGCTATGCCCACTTTTGGCGTTCTTTCAAGCATTGGGTGTCCCTGAAAAGCAACTTGGAAAGATGATTCTACTCAACCCGAGGCTTATTAGTTACAGCATTGAATCGAAACTCGTTGAAACTGTAGATTTTCTTGCTGGAGTTGGGCTAACGAAGGAGGGGGTGATTGGAAAAGTTCTTGCCAAAAATCCATTTCTCATGGGTTATAGTGTTGATAAAAGGCTCCGCCCGACTGTGGAGTTTCTGAAATCAATCGGTCTAAACAAGATGGATCTTCAAGCAGTTGCACTGAAATTTCCAGATATTTTGTGTAGGGACGTGGACAAAGTTTTGAGATATAATTTAGATTATCTAAGGAGCCGTGGGTTTAAAGATGGAGAAATAGTGTCTTTGGTGACTGGTTATCCTCCTGTTTTGATCAAGAGCATTCAACATTCTTTAGAACCTCGGATCAGATTTTTGGTCGAAATAATGGGAAGAAAACTTGAGGAAGTTGCTGAATATCCTGACTTTTTTAAGCATGGTTTGAAGAAAAAACTTGAGCTGCGGCATAGATTGTTGAAAGAGAAGAACGTTGACTTTGCCTTGAGTGAATTGTTGGAATGCAATCAAAAGAAGTTTATGATGAAAATGGGTTTGTTATGAGGCTATGCCTGGAGTTTTAGGTCTTCATATCCTGAAAGAACGTTGTTTTCTCAACATCTTTATAAGTTTTGTTGCCTAATTTTAGTTTTCCGGATTTCTAGTTAAAAGTGAAGAGCATTCGTCTTGCCAAGCAGCTGCCTTTAGGCCTGGATCATTCTTGTCCTCCATTCATGCTTCATGCTTTAGGCTCTTAATGGTTTCCCTTGTGTTTTAACAATTTGAATGGAGTGGAGTACATACAAATTACCCTCTTGTAAACTCCTTGCTCTATTTTGTATAGGTAGAGATTTGAAACCTCTGGTCCTCTCTTGTAGTTTTCTTCTTTAATGTTAAGATTTTTTTGGTGCTAGAATGTGTACTCTTCTTGGACTCATTGTTCTTAACAGTTACAACGGATTGTTGGGTTTTTTTTGCTTATGGGGTAGCATCTCTTGAAAAATCAAAAGATGTTTTTTACTTGGAGA

Coding sequence (CDS)

ATGGAAAGTAGCGCCAGTCGAAATGGTAATTGCATGCTGTGGTTCTTCAGGGATAAAGGTTTTGATGATAGAAGTATTGATAAGATGTTTAGAAAGTGTAGGCGTTTAGAAGATATGCAGAATGAAAGAGCTTCTGAAAACTGGGAATATTTGGAAAGAATTGGGATTCAAAAGAGGAAACTCCCTTCTGTTGTTTCCAAATGCCCTAAGATTTTAGCTCTTGGTCTTCAAGAGAAACTCGTTCCCATGGTTGAGTGCCTTGCAACACTCAGCACCAAGCCTCATGAAATAGCTGCAGCTATTGCTAAATTTCCTGGTATTCTTTCCTATAGTGTTGAAGAGAAGCTATGCCCACTTTTGGCGTTCTTTCAAGCATTGGGTGTCCCTGAAAAGCAACTTGGAAAGATGATTCTACTCAACCCGAGGCTTATTAGTTACAGCATTGAATCGAAACTCGTTGAAACTGTAGATTTTCTTGCTGGAGTTGGGCTAACGAAGGAGGGGGTGATTGGAAAAGTTCTTGCCAAAAATCCATTTCTCATGGGTTATAGTGTTGATAAAAGGCTCCGCCCGACTGTGGAGTTTCTGAAATCAATCGGTCTAAACAAGATGGATCTTCAAGCAGTTGCACTGAAATTTCCAGATATTTTGTGTAGGGACGTGGACAAAGTTTTGAGATATAATTTAGATTATCTAAGGAGCCGTGGGTTTAAAGATGGAGAAATAGTGTCTTTGGTGACTGGTTATCCTCCTGTTTTGATCAAGAGCATTCAACATTCTTTAGAACCTCGGATCAGATTTTTGGTCGAAATAATGGGAAGAAAACTTGAGGAAGTTGCTGAATATCCTGACTTTTTTAAGCATGGTTTGAAGAAAAAACTTGAGCTGCGGCATAGATTGTTGAAAGAGAAGAACGTTGACTTTGCCTTGAGTGAATTGTTGGAATGCAATCAAAAGAAGTTTATGATGAAAATGGGTTTGTTATGA

Protein sequence

MESSASRNGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDMQNERASENWEYLERIGIQKRKLPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLLAFFQALGVPEKQLGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFLMGYSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDILCRDVDKVLRYNLDYLRSRGFKDGEIVSLVTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLEEVAEYPDFFKHGLKKKLELRHRLLKEKNVDFALSELLECNQKKFMMKMGLL*

Homology

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BLAST of CSPI07G02370 vs. ExPASy Swiss-Prot
Match: Q9SZL6 (Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF6 PE=2 SV=1)

HSP 1 Score: 429.9 bits (1104), Expect = 2.6e-119
Identity = 208/321 (64.80%), Postives = 265/321 (82.55%), Query Frame = 0


Query: 8   NGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDMQNERASENWEYLERI-GIQKRKLPSVVS 67
           N + ++WFFRDKGFDD SIDKM RKC++LE  Q++ ASENW+YL  I GIQ+RKLP +VS
Sbjct: 5   NTSSIMWFFRDKGFDDPSIDKMLRKCKQLEKAQSDVASENWDYLSNIVGIQERKLPYIVS 64

Query: 68  KCPKILALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLLAFFQAL 127
           +CPKIL L L E+L+PMVECL++L   P E+A+AI KFP ILS+SVEEKLCPLLAFFQAL
Sbjct: 65  RCPKILTLRLDERLIPMVECLSSLGRNPREVASAITKFPPILSHSVEEKLCPLLAFFQAL 124

Query: 128 GVPEKQLGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFLMGYSVD 187
           GVPE QLGKMIL NPRLISYSI++KL   V FLA +GL ++G+IGKVL KNPFLMGYSVD
Sbjct: 125 GVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLVKNPFLMGYSVD 184

Query: 188 KRLRPTVEFLK-SIGLNKMDLQAVALKFPDILCRDVDKVLRYNLDYLRSRGFKDGEIVSL 247
           KRLRPT EFLK S+GL++  +++V + FP +LCRDV+K+L+ N DYL+  GF D +I ++
Sbjct: 185 KRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYLKECGFGDSQIATM 244

Query: 248 VTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLEEVAEYPDFFKHGLKKKLELRHRLLKEKN 307
           VTGYP +LIKS+++SL+PRIRFLV++MGR ++EVA YP+FF HGLKKK+E R +L+K+ N
Sbjct: 245 VTGYPQILIKSVKNSLQPRIRFLVQVMGRGMDEVASYPEFFHHGLKKKVESRFKLVKKNN 304

Query: 308 VDFALSELLECNQKKFMMKMG 327
           +D +L E+L+CN KKF  K G
Sbjct: 305 IDCSLREMLDCNTKKFHEKFG 325

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BLAST of CSPI07G02370 vs. ExPASy Swiss-Prot
Match: Q6AUK6 (Transcription termination factor MTERF4, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0404000 PE=2 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 1.1e-27
Identity = 72/313 (23.00%), Postives = 154/313 (49.20%), Query Frame = 0


Query: 49  EYLERIGIQKRKLPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGIL 108
           +YL ++G+++  LP ++ + P++L   +   L P+V+ L  +  +PH++   + ++P +L
Sbjct: 149 DYLGKLGVRQDALPDLLRRYPQVLHASVVVDLAPVVKYLQGMDVRPHDVPRVLERYPELL 208

Query: 109 SYSVEEKLCPLLAFFQALGVPEKQLGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEG 168
            + +E  +   +A+   +GV  +Q+G +I   P ++   +   +   V+ L G+GL +  
Sbjct: 209 GFKLEGTMSTSIAYLVGIGVARRQVGSVITRFPEVLGMRVGKIIKPFVEHLEGIGLQRL- 268

Query: 169 VIGKVLAKNPFLMGYSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDIL----------- 228
            I +++ K P+++G+ ++ +++P +E L   G+ K  L  +  ++PDIL           
Sbjct: 269 AIARIIEKKPYVLGFGLEDKVKPNIEALLEFGVRKEALAFIVAQYPDILGIELRDKLATQ 328

Query: 229 -----------CRDVDKVLR--------------YNLDYLRSRGFKDGEIVSLVTGYPPV 288
                        D  +V+                ++++L S GF   ++  +V   P +
Sbjct: 329 QSLFESSILVSSEDFGRVIERMPQAISLGRTAVLKHVNFLTSCGFLLSQVSKMVVACPQL 388

Query: 289 LIKSIQHSLEPRIRFLVEIMGRKLEEVAEYPDFFKHGLKKKLELRHRLLKEKNVDFALSE 326
           L  ++   ++    +    M R LEE+ E+P FF +GL+  +  RH ++ +K    +L+ 
Sbjct: 389 LALNMD-IMKMSFEYFQNEMERDLEELVEFPAFFTYGLESTVRPRHEMVAKKGFTCSLAW 448

[Close]

BLAST of CSPI07G02370 vs. ExPASy Swiss-Prot
Match: F4IHL3 (Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF2 PE=3 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 1.4e-27
Identity = 75/291 (25.77%), Postives = 148/291 (50.86%), Query Frame = 0


Query: 32  KCRRLEDMQNERASENWEYLERIGIQKRKLPSVVSKCPKILALGLQEKLVPMVECLATLS 91
           +C  L     E      ++  ++G+ +    ++V   PKI+     + +   +  L    
Sbjct: 304 RCPELLSFSMEEVKSRVDFFLKMGMNQNDFGTMVYDYPKIIGFFSFQVMEKKINYLKEFG 363

Query: 92  TKPHEIAAAIAKFPGILSYSVEEKLCPLLAFFQALGVPEKQLGKMILLNPRLISYSIESK 151
               E+   +A  P ++  S+EE+  PL+ +F  LG+P++ + +++++ P L    +E  
Sbjct: 364 LSTEEVGRLLAYKPHLMGCSIEERWKPLVKYFYYLGIPKEGMKRILVVKPILYCIDLEKT 423

Query: 152 LVETVDFLAGVGLTKEGVIGKVLAKNPFLMGYSVDKRLRPTVEFLKS-IGLNKMDLQAVA 211
           +   V FL  +G+  E  IG +L K P L+  S+ K++RP V FL +  G+ + D+  V 
Sbjct: 424 IAPKVRFLQEMGIPNE-AIGNMLVKFPSLLTNSLYKKIRPVVIFLLTRAGVTQKDIGKVI 483

Query: 212 LKFPDILCRDVDKVLRYNLDYLRSRGFKDGEIVSLVTGYPPVLIKSIQHSLEPRIRFLVE 271
              P +L   +   L  N+ Y  S G +  ++  ++  +P +L  ++  +L P+ R+L  
Sbjct: 484 AMDPALLGCSIGTKLEPNMRYYISLGIRFYQLGEMIADFPMLLRYNVD-NLRPKYRYLRR 543

Query: 272 IMGRKLEEVAEYPDFFKHGLKKKLELRHRLLKEKNVDFALSELLECNQKKF 322
            M R L+++ E+P FF + L++++  RH ++ E  V+F L  +L C  ++F
Sbjct: 544 TMIRPLQDLIEFPRFFSYSLERRIIPRHTIMVENRVNFKLRYMLACTDEEF 592

[Close]

BLAST of CSPI07G02370 vs. ExPASy Swiss-Prot
Match: B6TGN4 (Transcription termination factor MTERF4, chloroplastic OS=Zea mays OX=4577 GN=MTERF4 PE=2 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 1.4e-27
Identity = 71/313 (22.68%), Postives = 155/313 (49.52%), Query Frame = 0


Query: 49  EYLERIGIQKRKLPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGIL 108
           +YL ++G+++  LP ++ + P++L   +   L P+V+ L  +  +P ++   + ++P +L
Sbjct: 140 DYLGKLGVRRDALPDLLRRYPQVLHASVVVDLAPVVKYLQGMDVRPTDVPRVLERYPELL 199

Query: 109 SYSVEEKLCPLLAFFQALGVPEKQLGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEG 168
            + +E  +   +A+   +GV  +Q+G +I   P ++   +   +   V+ L G+GL +  
Sbjct: 200 GFKLEGTMSTSVAYLVGIGVGRRQVGSVITRFPEVLGMRVGKIIKPFVEHLEGIGLQRL- 259

Query: 169 VIGKVLAKNPFLMGYSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDIL----------- 228
            I +++ K P+++G+ + ++++P +E L  IG+ K  L ++ +++PD+L           
Sbjct: 260 AIARIIEKKPYVLGFGLQEKVKPNIEALVDIGVRKEALASIVMQYPDVLGLELRDKLVAQ 319

Query: 229 -----------CRDVDKVLR--------------YNLDYLRSRGFKDGEIVSLVTGYPPV 288
                        D  +VL                ++++L + GF   ++  +V   P +
Sbjct: 320 QSLFESSILVSREDFGRVLERMPQAISLGRAAVLKHVNFLTACGFMLSQVSKMVVACPQL 379

Query: 289 LIKSIQHSLEPRIRFLVEIMGRKLEEVAEYPDFFKHGLKKKLELRHRLLKEKNVDFALSE 326
           L  +I   +     +    M R LEE+ E+P FF +G++  +  RH ++  K +  +L+ 
Sbjct: 380 LALNID-IMRMNFEYFKNEMERDLEELVEFPAFFTYGIESTVRPRHEMVSRKGLTCSLAW 439

[Close]

BLAST of CSPI07G02370 vs. ExPASy Swiss-Prot
Match: F4JVI3 (Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF5 PE=1 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 1.2e-26
Identity = 85/316 (26.90%), Postives = 162/316 (51.27%), Query Frame = 0


Query: 19  KGFDDRSID-KMFRKCRRLEDMQNERA-SENWEYLERIGIQKRKLPSVVSKCPKILALGL 78
           +G  D + D +  R   R+ ++  E A      YL  +G+   ++ ++  K        L
Sbjct: 169 RGDTDSAADTRKLRAVSRVSELDTEGALRPQTLYLLDLGLNLEQIKTITRKFAAFPYYSL 228

Query: 79  QEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLLAFFQALGVPEKQLGKM 138
             K+ P+VE L  L     +I   + K P I   S+ + L P +AF + LG+ + Q  K+
Sbjct: 229 DGKIKPVVEFLLDLGIPKSDIPTILCKRPQICGISLTDNLKPTMAFLETLGIDKNQWAKI 288

Query: 139 ILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFLMGYSVDKRLRPTVEFL 198
           I   P +++YS   KL  TV+FL+  GLT+E  IG++L + P +M YSV+ +LRPT+E+ 
Sbjct: 289 ISRFPAILTYS-RQKLTSTVEFLSQTGLTEE-QIGRILTRCPNIMSYSVEDKLRPTMEYF 348

Query: 199 KSIGLNKMDLQAVALKFPDILCRDVDKVLRYNLDYLRSRGFKDGEIVSLVTGYPPVLIKS 258
           +S+    +D+  +  + P      ++  L+   ++   +GF   EI  +++ Y  +   S
Sbjct: 349 RSL---NVDVAVLLHRCPQTFGLSIESNLKPVTEFFLEKGFGLDEIGIMISRYGALYTFS 408

Query: 259 IQHSLEPRIRFLVEIMGRKLEEVAEYPDFFKHGLKKKLELRHRLLKEKNVDFALSELLEC 318
           ++ ++ P+  +  + M     E+ ++P FF + L+++++ R+ L++   V   L+++L  
Sbjct: 409 LKENVMPKWDYF-QTMDYPKSELVKFPQFFGYSLQERIKPRYELVQRSGVRLLLNQVLSL 468

Query: 319 N-------QKKFMMKM 326
           +        KK MMK+
Sbjct: 469 SGIEFEKVVKKKMMKL 478

[Close]

BLAST of CSPI07G02370 vs. ExPASy TrEMBL
Match: A0A0A0K108 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G029940 PE=3 SV=1)

HSP 1 Score: 646.7 bits (1667), Expect = 5.1e-182
Identity = 328/328 (100.00%), Postives = 328/328 (100.00%), Query Frame = 0


Query: 1   MESSASRNGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDMQNERASENWEYLERIGIQKRK 60
           MESSASRNGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDMQNERASENWEYLERIGIQKRK
Sbjct: 1   MESSASRNGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDMQNERASENWEYLERIGIQKRK 60

Query: 61  LPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLL 120
           LPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLL
Sbjct: 61  LPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLL 120

Query: 121 AFFQALGVPEKQLGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFL 180
           AFFQALGVPEKQLGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFL
Sbjct: 121 AFFQALGVPEKQLGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFL 180

Query: 181 MGYSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDILCRDVDKVLRYNLDYLRSRGFKDG 240
           MGYSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDILCRDVDKVLRYNLDYLRSRGFKDG
Sbjct: 181 MGYSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDILCRDVDKVLRYNLDYLRSRGFKDG 240

Query: 241 EIVSLVTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLEEVAEYPDFFKHGLKKKLELRHRL 300
           EIVSLVTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLEEVAEYPDFFKHGLKKKLELRHRL
Sbjct: 241 EIVSLVTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLEEVAEYPDFFKHGLKKKLELRHRL 300

Query: 301 LKEKNVDFALSELLECNQKKFMMKMGLL 329
           LKEKNVDFALSELLECNQKKFMMKMGLL
Sbjct: 301 LKEKNVDFALSELLECNQKKFMMKMGLL 328

[Close]

BLAST of CSPI07G02370 vs. ExPASy TrEMBL
Match: A0A5A7UUK2 (Transcription termination factor MTERF6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold640G00330 PE=3 SV=1)

HSP 1 Score: 634.0 bits (1634), Expect = 3.4e-178
Identity = 321/328 (97.87%), Postives = 324/328 (98.78%), Query Frame = 0


Query: 1   MESSASRNGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDMQNERASENWEYLERIGIQKRK 60
           MESSAS+NGNCMLWFFRDKGFDDRSIDKMFRKCRRLED QNERASENWEYLERIGIQKRK
Sbjct: 8   MESSASQNGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDTQNERASENWEYLERIGIQKRK 67

Query: 61  LPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLL 120
           LPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLL
Sbjct: 68  LPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLL 127

Query: 121 AFFQALGVPEKQLGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFL 180
           AFFQALGVPEK LGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFL
Sbjct: 128 AFFQALGVPEKHLGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFL 187

Query: 181 MGYSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDILCRDVDKVLRYNLDYLRSRGFKDG 240
           MGYSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDILCRDVDKVLR NLDYLRSRGFKDG
Sbjct: 188 MGYSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDILCRDVDKVLRSNLDYLRSRGFKDG 247

Query: 241 EIVSLVTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLEEVAEYPDFFKHGLKKKLELRHRL 300
           EIVS+VTGYPPVLIKSIQHSLEPRIRFLVEIMGRKL+EVAEYPDFFKHGLKKKLELRHRL
Sbjct: 248 EIVSMVTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLDEVAEYPDFFKHGLKKKLELRHRL 307

Query: 301 LKEKNVDFALSELLECNQKKFMMKMGLL 329
           LKEKNVDF LSELLECNQKKFMMKMGLL
Sbjct: 308 LKEKNVDFTLSELLECNQKKFMMKMGLL 335

[Close]

BLAST of CSPI07G02370 vs. ExPASy TrEMBL
Match: A0A1S3BQA2 (transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Cucumis melo OX=3656 GN=LOC103492550 PE=3 SV=1)

HSP 1 Score: 634.0 bits (1634), Expect = 3.4e-178
Identity = 321/328 (97.87%), Postives = 324/328 (98.78%), Query Frame = 0


Query: 1   MESSASRNGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDMQNERASENWEYLERIGIQKRK 60
           MESSAS+NGNCMLWFFRDKGFDDRSIDKMFRKCRRLED QNERASENWEYLERIGIQKRK
Sbjct: 1   MESSASQNGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDTQNERASENWEYLERIGIQKRK 60

Query: 61  LPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLL 120
           LPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLL
Sbjct: 61  LPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLL 120

Query: 121 AFFQALGVPEKQLGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFL 180
           AFFQALGVPEK LGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFL
Sbjct: 121 AFFQALGVPEKHLGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFL 180

Query: 181 MGYSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDILCRDVDKVLRYNLDYLRSRGFKDG 240
           MGYSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDILCRDVDKVLR NLDYLRSRGFKDG
Sbjct: 181 MGYSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDILCRDVDKVLRSNLDYLRSRGFKDG 240

Query: 241 EIVSLVTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLEEVAEYPDFFKHGLKKKLELRHRL 300
           EIVS+VTGYPPVLIKSIQHSLEPRIRFLVEIMGRKL+EVAEYPDFFKHGLKKKLELRHRL
Sbjct: 241 EIVSMVTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLDEVAEYPDFFKHGLKKKLELRHRL 300

Query: 301 LKEKNVDFALSELLECNQKKFMMKMGLL 329
           LKEKNVDF LSELLECNQKKFMMKMGLL
Sbjct: 301 LKEKNVDFTLSELLECNQKKFMMKMGLL 328

[Close]

BLAST of CSPI07G02370 vs. ExPASy TrEMBL
Match: A0A6J1I081 (transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111468249 PE=3 SV=1)

HSP 1 Score: 584.3 bits (1505), Expect = 3.1e-163
Identity = 294/328 (89.63%), Postives = 308/328 (93.90%), Query Frame = 0


Query: 1   MESSASRNGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDMQNERASENWEYLERIGIQKRK 60
           ME S SRNG  MLWFFRDKGFDD SIDKMF+KCRRLE MQNERA+ENWEYLE IGIQKRK
Sbjct: 1   MEISGSRNGTSMLWFFRDKGFDDGSIDKMFKKCRRLEGMQNERAAENWEYLEGIGIQKRK 60

Query: 61  LPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLL 120
           LPSVVSKCPKIL LGLQEK+ PMVECLATL+TKP EIA AIAKFPGILSYSVEEKLCPLL
Sbjct: 61  LPSVVSKCPKILVLGLQEKIAPMVECLATLTTKPREIATAIAKFPGILSYSVEEKLCPLL 120

Query: 121 AFFQALGVPEKQLGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFL 180
           AFFQALGVPEKQLGKMILLNPRLISYSIESKL+ETVDFLAGVGLTKEG+IGKVL KNPFL
Sbjct: 121 AFFQALGVPEKQLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKEGMIGKVLVKNPFL 180

Query: 181 MGYSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDILCRDVDKVLRYNLDYLRSRGFKDG 240
           +GYSV KRLRPT EFLKSIGL++MDLQAVALKFPDILCRDVDKVLR NLDYLR RGFKDG
Sbjct: 181 IGYSVHKRLRPTFEFLKSIGLSEMDLQAVALKFPDILCRDVDKVLRPNLDYLRRRGFKDG 240

Query: 241 EIVSLVTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLEEVAEYPDFFKHGLKKKLELRHRL 300
           EIVSLVTGYPP+LIKSIQHSLEPRIRFLVEIMGR L+EVAEYP+FFKHGLKK+LELRHRL
Sbjct: 241 EIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRTLDEVAEYPEFFKHGLKKRLELRHRL 300

Query: 301 LKEKNVDFALSELLECNQKKFMMKMGLL 329
           LKEK +DF LSELLECNQKKFMMKM LL
Sbjct: 301 LKEKTMDFTLSELLECNQKKFMMKMSLL 328

[Close]

BLAST of CSPI07G02370 vs. ExPASy TrEMBL
Match: A0A6J1GLD3 (transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111455322 PE=3 SV=1)

HSP 1 Score: 583.9 bits (1504), Expect = 4.1e-163
Identity = 294/328 (89.63%), Postives = 309/328 (94.21%), Query Frame = 0


Query: 1   MESSASRNGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDMQNERASENWEYLERIGIQKRK 60
           ME S SRNG  MLWFFRDKGFDD SIDKMF+KCRRLE MQNERA+ENWEYLE IGIQKRK
Sbjct: 1   MEISGSRNGTSMLWFFRDKGFDDGSIDKMFKKCRRLEGMQNERAAENWEYLEGIGIQKRK 60

Query: 61  LPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLL 120
           LPSVVSKCPKIL LGLQEK+ PMVECLATLSTKP EIA AIAKFPGILSYSVEEKLCPLL
Sbjct: 61  LPSVVSKCPKILVLGLQEKIAPMVECLATLSTKPREIATAIAKFPGILSYSVEEKLCPLL 120

Query: 121 AFFQALGVPEKQLGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFL 180
           AFFQALGVPEKQLGKMILLNPRLISYSIESKL+ETVDFLAGVGLTK+G+IGKVLAKNPFL
Sbjct: 121 AFFQALGVPEKQLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKDGMIGKVLAKNPFL 180

Query: 181 MGYSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDILCRDVDKVLRYNLDYLRSRGFKDG 240
           +GYSV KRLRPT EFLKSIGL++MDLQAVALKFPDILCRDVDKVLR NLDYLR RGFKDG
Sbjct: 181 IGYSVHKRLRPTFEFLKSIGLSEMDLQAVALKFPDILCRDVDKVLRPNLDYLRRRGFKDG 240

Query: 241 EIVSLVTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLEEVAEYPDFFKHGLKKKLELRHRL 300
           EIVSLVTGYPP+LIKSIQHSLEPRI+FLVEIM RKL+EVAEYP+FFKHGLKK+LELRHRL
Sbjct: 241 EIVSLVTGYPPILIKSIQHSLEPRIKFLVEIMERKLDEVAEYPEFFKHGLKKRLELRHRL 300

Query: 301 LKEKNVDFALSELLECNQKKFMMKMGLL 329
           LKEK +DF LSELLECNQKKFMMKM LL
Sbjct: 301 LKEKTMDFTLSELLECNQKKFMMKMSLL 328

[Close]

BLAST of CSPI07G02370 vs. NCBI nr
Match: XP_004144567.1 (transcription termination factor MTERF6, chloroplastic/mitochondrial [Cucumis sativus] >KGN43380.1 hypothetical protein Csa_020537 [Cucumis sativus])

HSP 1 Score: 646.7 bits (1667), Expect = 1.1e-181
Identity = 328/328 (100.00%), Postives = 328/328 (100.00%), Query Frame = 0


Query: 1   MESSASRNGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDMQNERASENWEYLERIGIQKRK 60
           MESSASRNGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDMQNERASENWEYLERIGIQKRK
Sbjct: 1   MESSASRNGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDMQNERASENWEYLERIGIQKRK 60

Query: 61  LPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLL 120
           LPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLL
Sbjct: 61  LPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLL 120

Query: 121 AFFQALGVPEKQLGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFL 180
           AFFQALGVPEKQLGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFL
Sbjct: 121 AFFQALGVPEKQLGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFL 180

Query: 181 MGYSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDILCRDVDKVLRYNLDYLRSRGFKDG 240
           MGYSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDILCRDVDKVLRYNLDYLRSRGFKDG
Sbjct: 181 MGYSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDILCRDVDKVLRYNLDYLRSRGFKDG 240

Query: 241 EIVSLVTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLEEVAEYPDFFKHGLKKKLELRHRL 300
           EIVSLVTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLEEVAEYPDFFKHGLKKKLELRHRL
Sbjct: 241 EIVSLVTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLEEVAEYPDFFKHGLKKKLELRHRL 300

Query: 301 LKEKNVDFALSELLECNQKKFMMKMGLL 329
           LKEKNVDFALSELLECNQKKFMMKMGLL
Sbjct: 301 LKEKNVDFALSELLECNQKKFMMKMGLL 328

[Close]

BLAST of CSPI07G02370 vs. NCBI nr
Match: XP_008451174.1 (PREDICTED: transcription termination factor MTERF6, chloroplastic/mitochondrial [Cucumis melo])

HSP 1 Score: 634.0 bits (1634), Expect = 7.1e-178
Identity = 321/328 (97.87%), Postives = 324/328 (98.78%), Query Frame = 0


Query: 1   MESSASRNGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDMQNERASENWEYLERIGIQKRK 60
           MESSAS+NGNCMLWFFRDKGFDDRSIDKMFRKCRRLED QNERASENWEYLERIGIQKRK
Sbjct: 1   MESSASQNGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDTQNERASENWEYLERIGIQKRK 60

Query: 61  LPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLL 120
           LPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLL
Sbjct: 61  LPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLL 120

Query: 121 AFFQALGVPEKQLGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFL 180
           AFFQALGVPEK LGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFL
Sbjct: 121 AFFQALGVPEKHLGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFL 180

Query: 181 MGYSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDILCRDVDKVLRYNLDYLRSRGFKDG 240
           MGYSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDILCRDVDKVLR NLDYLRSRGFKDG
Sbjct: 181 MGYSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDILCRDVDKVLRSNLDYLRSRGFKDG 240

Query: 241 EIVSLVTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLEEVAEYPDFFKHGLKKKLELRHRL 300
           EIVS+VTGYPPVLIKSIQHSLEPRIRFLVEIMGRKL+EVAEYPDFFKHGLKKKLELRHRL
Sbjct: 241 EIVSMVTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLDEVAEYPDFFKHGLKKKLELRHRL 300

Query: 301 LKEKNVDFALSELLECNQKKFMMKMGLL 329
           LKEKNVDF LSELLECNQKKFMMKMGLL
Sbjct: 301 LKEKNVDFTLSELLECNQKKFMMKMGLL 328

[Close]

BLAST of CSPI07G02370 vs. NCBI nr
Match: KAA0059582.1 (transcription termination factor MTERF6 [Cucumis melo var. makuwa] >TYK25788.1 transcription termination factor MTERF6 [Cucumis melo var. makuwa])

HSP 1 Score: 634.0 bits (1634), Expect = 7.1e-178
Identity = 321/328 (97.87%), Postives = 324/328 (98.78%), Query Frame = 0


Query: 1   MESSASRNGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDMQNERASENWEYLERIGIQKRK 60
           MESSAS+NGNCMLWFFRDKGFDDRSIDKMFRKCRRLED QNERASENWEYLERIGIQKRK
Sbjct: 8   MESSASQNGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDTQNERASENWEYLERIGIQKRK 67

Query: 61  LPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLL 120
           LPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLL
Sbjct: 68  LPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLL 127

Query: 121 AFFQALGVPEKQLGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFL 180
           AFFQALGVPEK LGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFL
Sbjct: 128 AFFQALGVPEKHLGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFL 187

Query: 181 MGYSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDILCRDVDKVLRYNLDYLRSRGFKDG 240
           MGYSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDILCRDVDKVLR NLDYLRSRGFKDG
Sbjct: 188 MGYSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDILCRDVDKVLRSNLDYLRSRGFKDG 247

Query: 241 EIVSLVTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLEEVAEYPDFFKHGLKKKLELRHRL 300
           EIVS+VTGYPPVLIKSIQHSLEPRIRFLVEIMGRKL+EVAEYPDFFKHGLKKKLELRHRL
Sbjct: 248 EIVSMVTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLDEVAEYPDFFKHGLKKKLELRHRL 307

Query: 301 LKEKNVDFALSELLECNQKKFMMKMGLL 329
           LKEKNVDF LSELLECNQKKFMMKMGLL
Sbjct: 308 LKEKNVDFTLSELLECNQKKFMMKMGLL 335

[Close]

BLAST of CSPI07G02370 vs. NCBI nr
Match: XP_038887558.1 (transcription termination factor MTERF6, chloroplastic/mitochondrial [Benincasa hispida])

HSP 1 Score: 604.0 bits (1556), Expect = 7.8e-169
Identity = 304/328 (92.68%), Postives = 316/328 (96.34%), Query Frame = 0


Query: 1   MESSASRNGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDMQNERASENWEYLERIGIQKRK 60
           ME SASRNGNCMLWFFRDKGFDDRSIDKMF++CRRL+DMQ ERASENWEYLERIGIQ+RK
Sbjct: 1   MEVSASRNGNCMLWFFRDKGFDDRSIDKMFKRCRRLKDMQKERASENWEYLERIGIQRRK 60

Query: 61  LPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLL 120
           LPS+VSKCPKILALGLQEKLVPMVECLATLSTKP+EIA+AIAKFPGILSYSVEEKLCPLL
Sbjct: 61  LPSIVSKCPKILALGLQEKLVPMVECLATLSTKPNEIASAIAKFPGILSYSVEEKLCPLL 120

Query: 121 AFFQALGVPEKQLGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFL 180
           AFFQALGVPEK LGKMILLNPRLISYSIESKLVETVDF AG GL KEGVIGKVLAKNPFL
Sbjct: 121 AFFQALGVPEKHLGKMILLNPRLISYSIESKLVETVDFFAGFGLMKEGVIGKVLAKNPFL 180

Query: 181 MGYSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDILCRDVDKVLRYNLDYLRSRGFKDG 240
           MGYSVDKRLRPT EFL+SIGLN+MDLQAVALKFPDILCRDVDKVLR NLDYLR  GFKDG
Sbjct: 181 MGYSVDKRLRPTSEFLRSIGLNEMDLQAVALKFPDILCRDVDKVLRPNLDYLRRCGFKDG 240

Query: 241 EIVSLVTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLEEVAEYPDFFKHGLKKKLELRHRL 300
           EIVSLVTGYPPVLIKSIQHSLEPRIRFLVEIMGRKL+EVAEYPDFFKHGLKK+LELRHRL
Sbjct: 241 EIVSLVTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLDEVAEYPDFFKHGLKKRLELRHRL 300

Query: 301 LKEKNVDFALSELLECNQKKFMMKMGLL 329
           LKEK +DF LSELLECNQKKFMMKMGLL
Sbjct: 301 LKEKQMDFTLSELLECNQKKFMMKMGLL 328

[Close]

BLAST of CSPI07G02370 vs. NCBI nr
Match: XP_022969173.1 (transcription termination factor MTERF6, chloroplastic/mitochondrial [Cucurbita maxima])

HSP 1 Score: 584.3 bits (1505), Expect = 6.4e-163
Identity = 294/328 (89.63%), Postives = 308/328 (93.90%), Query Frame = 0


Query: 1   MESSASRNGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDMQNERASENWEYLERIGIQKRK 60
           ME S SRNG  MLWFFRDKGFDD SIDKMF+KCRRLE MQNERA+ENWEYLE IGIQKRK
Sbjct: 1   MEISGSRNGTSMLWFFRDKGFDDGSIDKMFKKCRRLEGMQNERAAENWEYLEGIGIQKRK 60

Query: 61  LPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLL 120
           LPSVVSKCPKIL LGLQEK+ PMVECLATL+TKP EIA AIAKFPGILSYSVEEKLCPLL
Sbjct: 61  LPSVVSKCPKILVLGLQEKIAPMVECLATLTTKPREIATAIAKFPGILSYSVEEKLCPLL 120

Query: 121 AFFQALGVPEKQLGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFL 180
           AFFQALGVPEKQLGKMILLNPRLISYSIESKL+ETVDFLAGVGLTKEG+IGKVL KNPFL
Sbjct: 121 AFFQALGVPEKQLGKMILLNPRLISYSIESKLIETVDFLAGVGLTKEGMIGKVLVKNPFL 180

Query: 181 MGYSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDILCRDVDKVLRYNLDYLRSRGFKDG 240
           +GYSV KRLRPT EFLKSIGL++MDLQAVALKFPDILCRDVDKVLR NLDYLR RGFKDG
Sbjct: 181 IGYSVHKRLRPTFEFLKSIGLSEMDLQAVALKFPDILCRDVDKVLRPNLDYLRRRGFKDG 240

Query: 241 EIVSLVTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLEEVAEYPDFFKHGLKKKLELRHRL 300
           EIVSLVTGYPP+LIKSIQHSLEPRIRFLVEIMGR L+EVAEYP+FFKHGLKK+LELRHRL
Sbjct: 241 EIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRTLDEVAEYPEFFKHGLKKRLELRHRL 300

Query: 301 LKEKNVDFALSELLECNQKKFMMKMGLL 329
           LKEK +DF LSELLECNQKKFMMKM LL
Sbjct: 301 LKEKTMDFTLSELLECNQKKFMMKMSLL 328

[Close]

BLAST of CSPI07G02370 vs. TAIR 10
Match: AT4G38160.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 429.9 bits (1104), Expect = 1.9e-120
Identity = 208/321 (64.80%), Postives = 265/321 (82.55%), Query Frame = 0


Query: 8   NGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDMQNERASENWEYLERI-GIQKRKLPSVVS 67
           N + ++WFFRDKGFDD SIDKM RKC++LE  Q++ ASENW+YL  I GIQ+RKLP +VS
Sbjct: 5   NTSSIMWFFRDKGFDDPSIDKMLRKCKQLEKAQSDVASENWDYLSNIVGIQERKLPYIVS 64

Query: 68  KCPKILALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLLAFFQAL 127
           +CPKIL L L E+L+PMVECL++L   P E+A+AI KFP ILS+SVEEKLCPLLAFFQAL
Sbjct: 65  RCPKILTLRLDERLIPMVECLSSLGRNPREVASAITKFPPILSHSVEEKLCPLLAFFQAL 124

Query: 128 GVPEKQLGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFLMGYSVD 187
           GVPE QLGKMIL NPRLISYSI++KL   V FLA +GL ++G+IGKVL KNPFLMGYSVD
Sbjct: 125 GVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLVKNPFLMGYSVD 184

Query: 188 KRLRPTVEFLK-SIGLNKMDLQAVALKFPDILCRDVDKVLRYNLDYLRSRGFKDGEIVSL 247
           KRLRPT EFLK S+GL++  +++V + FP +LCRDV+K+L+ N DYL+  GF D +I ++
Sbjct: 185 KRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYLKECGFGDSQIATM 244

Query: 248 VTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLEEVAEYPDFFKHGLKKKLELRHRLLKEKN 307
           VTGYP +LIKS+++SL+PRIRFLV++MGR ++EVA YP+FF HGLKKK+E R +L+K+ N
Sbjct: 245 VTGYPQILIKSVKNSLQPRIRFLVQVMGRGMDEVASYPEFFHHGLKKKVESRFKLVKKNN 304

Query: 308 VDFALSELLECNQKKFMMKMG 327
           +D +L E+L+CN KKF  K G
Sbjct: 305 IDCSLREMLDCNTKKFHEKFG 325

[Close]

BLAST of CSPI07G02370 vs. TAIR 10
Match: AT4G38160.2 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 429.9 bits (1104), Expect = 1.9e-120
Identity = 208/321 (64.80%), Postives = 265/321 (82.55%), Query Frame = 0


Query: 8   NGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDMQNERASENWEYLERI-GIQKRKLPSVVS 67
           N + ++WFFRDKGFDD SIDKM RKC++LE  Q++ ASENW+YL  I GIQ+RKLP +VS
Sbjct: 5   NTSSIMWFFRDKGFDDPSIDKMLRKCKQLEKAQSDVASENWDYLSNIVGIQERKLPYIVS 64

Query: 68  KCPKILALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLLAFFQAL 127
           +CPKIL L L E+L+PMVECL++L   P E+A+AI KFP ILS+SVEEKLCPLLAFFQAL
Sbjct: 65  RCPKILTLRLDERLIPMVECLSSLGRNPREVASAITKFPPILSHSVEEKLCPLLAFFQAL 124

Query: 128 GVPEKQLGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFLMGYSVD 187
           GVPE QLGKMIL NPRLISYSI++KL   V FLA +GL ++G+IGKVL KNPFLMGYSVD
Sbjct: 125 GVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLVKNPFLMGYSVD 184

Query: 188 KRLRPTVEFLK-SIGLNKMDLQAVALKFPDILCRDVDKVLRYNLDYLRSRGFKDGEIVSL 247
           KRLRPT EFLK S+GL++  +++V + FP +LCRDV+K+L+ N DYL+  GF D +I ++
Sbjct: 185 KRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYLKECGFGDSQIATM 244

Query: 248 VTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLEEVAEYPDFFKHGLKKKLELRHRLLKEKN 307
           VTGYP +LIKS+++SL+PRIRFLV++MGR ++EVA YP+FF HGLKKK+E R +L+K+ N
Sbjct: 245 VTGYPQILIKSVKNSLQPRIRFLVQVMGRGMDEVASYPEFFHHGLKKKVESRFKLVKKNN 304

Query: 308 VDFALSELLECNQKKFMMKMG 327
           +D +L E+L+CN KKF  K G
Sbjct: 305 IDCSLREMLDCNTKKFHEKFG 325

[Close]

BLAST of CSPI07G02370 vs. TAIR 10
Match: AT4G38160.3 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 429.9 bits (1104), Expect = 1.9e-120
Identity = 208/321 (64.80%), Postives = 265/321 (82.55%), Query Frame = 0


Query: 8   NGNCMLWFFRDKGFDDRSIDKMFRKCRRLEDMQNERASENWEYLERI-GIQKRKLPSVVS 67
           N + ++WFFRDKGFDD SIDKM RKC++LE  Q++ ASENW+YL  I GIQ+RKLP +VS
Sbjct: 5   NTSSIMWFFRDKGFDDPSIDKMLRKCKQLEKAQSDVASENWDYLSNIVGIQERKLPYIVS 64

Query: 68  KCPKILALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGILSYSVEEKLCPLLAFFQAL 127
           +CPKIL L L E+L+PMVECL++L   P E+A+AI KFP ILS+SVEEKLCPLLAFFQAL
Sbjct: 65  RCPKILTLRLDERLIPMVECLSSLGRNPREVASAITKFPPILSHSVEEKLCPLLAFFQAL 124

Query: 128 GVPEKQLGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFLMGYSVD 187
           GVPE QLGKMIL NPRLISYSI++KL   V FLA +GL ++G+IGKVL KNPFLMGYSVD
Sbjct: 125 GVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLVKNPFLMGYSVD 184

Query: 188 KRLRPTVEFLK-SIGLNKMDLQAVALKFPDILCRDVDKVLRYNLDYLRSRGFKDGEIVSL 247
           KRLRPT EFLK S+GL++  +++V + FP +LCRDV+K+L+ N DYL+  GF D +I ++
Sbjct: 185 KRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYLKECGFGDSQIATM 244

Query: 248 VTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLEEVAEYPDFFKHGLKKKLELRHRLLKEKN 307
           VTGYP +LIKS+++SL+PRIRFLV++MGR ++EVA YP+FF HGLKKK+E R +L+K+ N
Sbjct: 245 VTGYPQILIKSVKNSLQPRIRFLVQVMGRGMDEVASYPEFFHHGLKKKVESRFKLVKKNN 304

Query: 308 VDFALSELLECNQKKFMMKMG 327
           +D +L E+L+CN KKF  K G
Sbjct: 305 IDCSLREMLDCNTKKFHEKFG 325

[Close]

BLAST of CSPI07G02370 vs. TAIR 10
Match: AT1G78930.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 131.3 bits (329), Expect = 1.4e-30
Identity = 80/271 (29.52%), Postives = 145/271 (53.51%), Query Frame = 0


Query: 51  LERIGIQKRKLPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGILSY 110
           +E++ +  +    ++ K P IL+  +QE    +     + S    +I  AI ++P +L  
Sbjct: 307 MEKVSVVNKDSGKLLLKYPWILSPSIQENYSHIGSFFYSESVLKMDIDHAIRRWPLLLGC 366

Query: 111 SVEEKLCPLLAFFQALGVPEKQLGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGVI 170
           S    +  ++  F  LGV +K++GK+I   P+L+      + ++ V FL  +G  KE ++
Sbjct: 367 SA-SNMEMMVKEFDKLGVRDKRMGKVIPKMPQLLLCK-PQEFLKVVCFLEDLGFQKE-IV 426

Query: 171 GKVLAKNPFLMGYSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDILCRDVDKVLRYNLD 230
           G++L + P + G S++K L+  + FL   G++      +  K+P+ L  D DK +   L 
Sbjct: 427 GQILCRCPEIFGCSIEKTLQKKLIFLTRFGVSTTHFPRIIKKYPEFLIYDADKTVLPRLK 486

Query: 231 YLRSRGFKDGEIVSLVTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLEEVAEYPDFFKHGL 290
           YL   G  + EI  ++  + P+L  SI   L P+  FLV  M + + EV EYP +F + L
Sbjct: 487 YLMEIGISEREIAFMIRKFSPILGYSIDKVLRPKFEFLVNSMEKPVREVIEYPRYFSYSL 546

Query: 291 KKKLELRHRLLKEKNVDFALSELLECNQKKF 322
           +K+++ R R+LK +N++  L E+L  N ++F
Sbjct: 547 EKRIKPRFRVLKGRNIECTLQEMLGKNDEEF 574

[Close]

BLAST of CSPI07G02370 vs. TAIR 10
Match: AT2G44020.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 127.5 bits (319), Expect = 2.0e-29
Identity = 75/308 (24.35%), Postives = 156/308 (50.65%), Query Frame = 0


Query: 50  YLERIGIQKRKLPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAAIAKFPGILS 109
           YLE+IGI + KL   V   P++L   +  +L P+V+ L  L  +  ++   + K+P +L 
Sbjct: 150 YLEKIGISRSKLGEFVKNYPQVLHASVVVELAPVVKFLRGLDVEKQDLGYVLMKYPELLG 209

Query: 110 YSVEEKLCPLLAFFQALGVPEKQLGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGV 169
           + +E  +   +A+  ++GV  + +G M+   P L+   + + +   VD+L  +GL K+ +
Sbjct: 210 FKLEGTMSTSVAYLVSIGVSPRDIGPMVTQYPYLLGMRVGTMIKPLVDYLISIGLPKK-I 269

Query: 170 IGKVLAKNPFLMGYSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDIL------------ 229
           + ++L K  +++GY++++ ++P V+ L S G+ K  L  +  ++P IL            
Sbjct: 270 VARMLEKRSYIVGYNLEETVKPNVDCLISFGVKKELLPLLIAQYPQILGLPVKAKMSTQQ 329

Query: 230 --------------CRDVDK----------VLRYNLDYLRSRGFKDGEIVSLVTGYPPVL 289
                          R V+K          V+   +++L  R F+  +I  +V   P +L
Sbjct: 330 YFFSLKLKIDPEGFARVVEKMPQIVSLKQNVIMKPIEFLLGRAFQVEDIAKMVVRCPQIL 389

Query: 290 IKSIQHSLEPRIRFLVEIMGRKLEEVAEYPDFFKHGLKKKLELRHRLLKEKNVDFALSEL 322
              ++  ++    F    MGR ++E+ EYP++F + L+ +++ R++ L+ K +  +L+  
Sbjct: 390 CSRVE-LMKNSYYFYKTEMGRPMKELVEYPEYFTYSLESRIKPRYQKLQSKGIRSSLNWF 449

The following BLAST results are available for this feature:

BLAST of CSPI07G02370 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZL6	2.6e-119	64.80	Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidop...	[more]
Q6AUK6	1.1e-27	23.00	Transcription termination factor MTERF4, chloroplastic OS=Oryza sativa subsp. ja...	[more]
F4IHL3	1.4e-27	25.77	Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana O...	[more]
B6TGN4	1.4e-27	22.68	Transcription termination factor MTERF4, chloroplastic OS=Zea mays OX=4577 GN=MT...	[more]
F4JVI3	1.2e-26	26.90	Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana O...	[more]

BLAST of CSPI07G02370 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K108	5.1e-182	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G029940 PE=3 SV=1	[more]
A0A5A7UUK2	3.4e-178	97.87	Transcription termination factor MTERF6 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3BQA2	3.4e-178	97.87	transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Cucumis ...	[more]
A0A6J1I081	3.1e-163	89.63	transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Cucurbit...	[more]
A0A6J1GLD3	4.1e-163	89.63	transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Cucurbit...	[more]

BLAST of CSPI07G02370 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144567.1	1.1e-181	100.00	transcription termination factor MTERF6, chloroplastic/mitochondrial [Cucumis sa...	[more]
XP_008451174.1	7.1e-178	97.87	PREDICTED: transcription termination factor MTERF6, chloroplastic/mitochondrial ...	[more]
KAA0059582.1	7.1e-178	97.87	transcription termination factor MTERF6 [Cucumis melo var. makuwa] >TYK25788.1 t...	[more]
XP_038887558.1	7.8e-169	92.68	transcription termination factor MTERF6, chloroplastic/mitochondrial [Benincasa ...	[more]
XP_022969173.1	6.4e-163	89.63	transcription termination factor MTERF6, chloroplastic/mitochondrial [Cucurbita ...	[more]

BLAST of CSPI07G02370 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38160.1	1.9e-120	64.80	Mitochondrial transcription termination factor family protein	[more]
AT4G38160.2	1.9e-120	64.80	Mitochondrial transcription termination factor family protein	[more]
AT4G38160.3	1.9e-120	64.80	Mitochondrial transcription termination factor family protein	[more]
AT1G78930.1	1.4e-30	29.52	Mitochondrial transcription termination factor family protein	[more]
AT2G44020.1	2.0e-29	24.35	Mitochondrial transcription termination factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 27..57 e-value: 670.0 score: 5.2 coord: 276..307 e-value: 4.1 score: 16.4 coord: 171..202 e-value: 8.9E-8 score: 41.8 coord: 98..129 e-value: 4.8E-4 score: 29.4 coord: 243..275 e-value: 0.31 score: 20.1 coord: 207..238 e-value: 0.2 score: 20.7 coord: 134..165 e-value: 4.8E-4 score: 29.4 coord: 62..93 e-value: 19.0 score: 14.1
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 12..169 e-value: 1.1E-23 score: 83.6 coord: 122..321 e-value: 1.7E-41 score: 142.2
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 11..327
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 95..326 e-value: 1.4E-53 score: 183.7
None	No IPR available	PANTHER	PTHR13068:SF5	TRANSCRIPTION TERMINATION FACTOR MTERF6, CHLOROPLASTIC/MITOCHONDRIAL	coord: 11..327

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI07G02370.1	CSPI07G02370.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0032502	developmental process
biological_process	GO:0006353	DNA-templated transcription, termination
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0003690	double-stranded DNA binding