CSPI06G34810 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI06G34810
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr6: 28507639 .. 28507999 (-)
RNA-Seq ExpressionCSPI06G34810
SyntenyCSPI06G34810
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATAAAATGATAATAGAATAACAATAAATAGAAATAATTGATTAGATGTGGTGCAGTGGCGTTGGCCACACGTTCGGAAGGGGAAGAGGGGCACGTGCGTGGCGGCCAATGGGAGCAGAGAGTGTGAAAGCTTTGAAGGCGGTTTTCTTTAGAAGGGGAGACGAGGTCGGGACCACGTTGGAAAGGCTGAAGTGGGGATGGCGCGGCCTTCCCTGACGGGGGTAGGATGGTCAATTTATGTAAATGAGGGAGATTTTGCTTTTCCCATATATGGGTTTCCATTTTAAATGAGGAATTTGGAAACCCCTCCTATCCTTCCCCTTTATTCCCTCTCCCACTCTCCCACTCTCCCACTCTCCCAC

mRNA sequence

ATAAAATGATAATAGAATAACAATAAATAGAAATAATTGATTAGATGTGGTGCAGTGGCGTTGGCCACACGTTCGGAAGGGGAAGAGGGGCACGTGCGTGGCGGCCAATGGGAGCAGAGAGTGTGAAAGCTTTGAAGGCGGTTTTCTTTAGAAGGGGAGACGAGGTCGGGACCACGTTGGAAAGGCTGAAGTGGGGATGGCGCGGCCTTCCCTGACGGGGGTAGGATGGTCAATTTATGTAAATGAGGGAGATTTTGCTTTTCCCATATATGGGTTTCCATTTTAAATGAGGAATTTGGAAACCCCTCCTATCCTTCCCCTTTATTCCCTCTCCCACTCTCCCACTCTCCCACTCTCCCAC

Coding sequence (CDS)

ATGTGGTGCAGTGGCGTTGGCCACACGTTCGGAAGGGGAAGAGGGGCACGTGCGTGGCGGCCAATGGGAGCAGAGAGTGTGAAAGCTTTGAAGGCGGTTTTCTTTAGAAGGGGAGACGAGGTCGGGACCACGTTGGAAAGGCTGAAGTGGGGATGGCGCGGCCTTCCCTGA

Protein sequence

MWCSGVGHTFGRGRGARAWRPMGAESVKALKAVFFRRGDEVGTTLERLKWGWRGLP*
Homology
[Close]
BLAST of CSPI06G34810 vs. ExPASy TrEMBL
Match: A0A0A0KNE0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G518030 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 2.2e-24
Identity = 54/56 (96.43%), Postives = 54/56 (96.43%), Query Frame = 0 

Query: 1  MWCSGVGHTFGRGRGARAWRPMGAESVKALKAVFFRRGDEVGTTLERLKWGWRGLP 57
          MWCSGVGHTFGRG  ARAWRPMGAESVKALKAVFFRRGDEVGTTLERLKWGWRGLP
Sbjct: 1  MWCSGVGHTFGRGGRARAWRPMGAESVKALKAVFFRRGDEVGTTLERLKWGWRGLP 56

[Close]
BLAST of CSPI06G34810 vs. NCBI nr
Match: KGN49246.1 (hypothetical protein Csa_003392 [Cucumis sativus])

HSP 1 Score: 120.6 bits (301), Expect = 4.5e-24
Identity = 54/56 (96.43%), Postives = 54/56 (96.43%), Query Frame = 0 

Query: 1  MWCSGVGHTFGRGRGARAWRPMGAESVKALKAVFFRRGDEVGTTLERLKWGWRGLP 57
          MWCSGVGHTFGRG  ARAWRPMGAESVKALKAVFFRRGDEVGTTLERLKWGWRGLP
Sbjct: 1  MWCSGVGHTFGRGGRARAWRPMGAESVKALKAVFFRRGDEVGTTLERLKWGWRGLP 56

The following BLAST results are available for this feature:
BLAST of CSPI06G34810 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI06G34810 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KNE02.2e-2496.43Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G518030 PE=4 SV=1[more]
BLAST of CSPI06G34810 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN49246.14.5e-2496.43hypothetical protein Csa_003392 [Cucumis sativus][more]
BLAST of CSPI06G34810 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI06G34810.1CSPI06G34810.1mRNA