CSPI06G34150 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI06G34150
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Wound induced protein-like
Location	Chr6: 28137727 .. 28138324 (+)
RNA-Seq Expression	CSPI06G34150
Synteny	CSPI06G34150

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAAGATGAGCTCAACTGTGACTGGCTGTGAGCGGATTCAAATGACCACCAGAGAAAGAGAGATGGAGAAGCCAATGGGCCGAATAGAAGGCCCATTTCCGGCCCAGTAATGAGGACCTTCGACGAAGCTCCCGTCCACAGGGATTTCGTATGTACTGACATGGAAAATTGAAAATTCCAATTCCTTATCCAAATAAAATAATCAACAAAAATGGCTTCCAATGGCACCAACTTTTCTTTTAGAACACGCCAATTCATCCTTATCTATTCGCCTTTCTTTGCTTTTATATAACCAAATTCCTTCATTCCAAGTTCTTGGAATTTGAATCGACTTTGATTGTACCATCAATTGTTCGTGGCATGAGCAGGGTGTTTGGGCAATTCGTGACACGGTGTATACAGAAGACCAGAGATCAGGCTGCGAAGAGCGATCCCGCTGCCTTGAAATCTCTCAAGGATTCTTCTTCTTCTTCGTCTTCTTCTTCTAAATGCTACTCCGGTAATAAATTCAGCGCTGGTGAGGGCCAGAATGTTAAGATAGCTGAAGAATCTTTAAGAACTGTCATGTATTTGAGTTGTTGGGCTCCAACCTGA

mRNA sequence

ATGGCGAAGATGAGCTCAACTGTGACTGGCTGTGAGCGGATTCAAATGACCACCAGAGAAAGAGAGATGGAGAAGCCAATGGGCCGAATAGAAGGCCCATTTCCGGCCCAGGTGTTTGGGCAATTCGTGACACGGTGTATACAGAAGACCAGAGATCAGGCTGCGAAGAGCGATCCCGCTGCCTTGAAATCTCTCAAGGATTCTTCTTCTTCTTCGTCTTCTTCTTCTAAATGCTACTCCGGTAATAAATTCAGCGCTGGTGAGGGCCAGAATGTTAAGATAGCTGAAGAATCTTTAAGAACTGTCATGTATTTGAGTTGTTGGGCTCCAACCTGA

Coding sequence (CDS)

ATGGCGAAGATGAGCTCAACTGTGACTGGCTGTGAGCGGATTCAAATGACCACCAGAGAAAGAGAGATGGAGAAGCCAATGGGCCGAATAGAAGGCCCATTTCCGGCCCAGGTGTTTGGGCAATTCGTGACACGGTGTATACAGAAGACCAGAGATCAGGCTGCGAAGAGCGATCCCGCTGCCTTGAAATCTCTCAAGGATTCTTCTTCTTCTTCGTCTTCTTCTTCTAAATGCTACTCCGGTAATAAATTCAGCGCTGGTGAGGGCCAGAATGTTAAGATAGCTGAAGAATCTTTAAGAACTGTCATGTATTTGAGTTGTTGGGCTCCAACCTGA

Protein sequence

MAKMSSTVTGCERIQMTTREREMEKPMGRIEGPFPAQVFGQFVTRCIQKTRDQAAKSDPAALKSLKDSSSSSSSSSKCYSGNKFSAGEGQNVKIAEESLRTVMYLSCWAPT*

Homology

[Close]

BLAST of CSPI06G34150 vs. ExPASy TrEMBL
Match: A0A0A0KK17 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G516870 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 4.4e-53
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0


Query: 1   MAKMSSTVTGCERIQMTTREREMEKPMGRIEGPFPAQVFGQFVTRCIQKTRDQAAKSDPA 60
           MAKMSSTVTGCERIQMTTREREMEKPMGRIEGPFPAQVFGQFVTRCIQKTRDQAAKSDPA
Sbjct: 1   MAKMSSTVTGCERIQMTTREREMEKPMGRIEGPFPAQVFGQFVTRCIQKTRDQAAKSDPA 60

Query: 61  ALKSLKDSSSSSSSSSKCYSGNKFSAGEGQNVKIAEESLRTVMYLSCWAPT 112
           ALKSLKDSSSSSSSSSKCYSGNKFSAGEGQNVKIAEESLRTVMYLSCWAPT
Sbjct: 61  ALKSLKDSSSSSSSSSKCYSGNKFSAGEGQNVKIAEESLRTVMYLSCWAPT 111

[Close]

BLAST of CSPI06G34150 vs. ExPASy TrEMBL
Match: A0A5D3CPJ3 (Wound induced protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007060 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 3.8e-28
Identity = 71/78 (91.03%), Postives = 73/78 (93.59%), Query Frame = 0


Query: 36  AQVFGQFVTRCIQKTRDQAAKSDPAALKSLKD--SSSSSSSSSKCYSGNKFSAGEGQNVK 95
           ++VFGQF TRCIQKTRDQA KSDPAALKSLKD  SSSSSSSSSKCYSGNK SAGEGQNVK
Sbjct: 2   SRVFGQFATRCIQKTRDQAVKSDPAALKSLKDSSSSSSSSSSSKCYSGNKLSAGEGQNVK 61

Query: 96  IAEESLRTVMYLSCWAPT 112
           IAEESLRTVMYLSCWAPT
Sbjct: 62  IAEESLRTVMYLSCWAPT 79

[Close]

BLAST of CSPI06G34150 vs. ExPASy TrEMBL
Match: A0A067GK87 (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g034643mg PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.8e-06
Identity = 39/73 (53.42%), Postives = 49/73 (67.12%), Query Frame = 0


Query: 45  RCIQKTRDQAAKSDPAALKSLKDSSSSSSSSSK---CYS----GNKFSAGEGQNVKIAEE 104
           R +Q  RDQA+K D +A KSLKDS+S+ SSSSK   C+S       F +   + ++ AEE
Sbjct: 16  RLMQVVRDQASKGD-SAFKSLKDSASACSSSSKQARCFSTAADSTAFKSARSEKLRQAEE 75

Query: 105 SLRTVMYLSCWAP 111
           SLRTVMYLSCW P
Sbjct: 76  SLRTVMYLSCWGP 87

[Close]

BLAST of CSPI06G34150 vs. ExPASy TrEMBL
Match: V4UE40 (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10017323mg PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.8e-06
Identity = 39/73 (53.42%), Postives = 49/73 (67.12%), Query Frame = 0


Query: 45  RCIQKTRDQAAKSDPAALKSLKDSSSSSSSSSK---CYS----GNKFSAGEGQNVKIAEE 104
           R +Q  RDQA+K D +A KSLKDS+S+ SSSSK   C+S       F +   + ++ AEE
Sbjct: 16  RVMQVVRDQASKGD-SAFKSLKDSASACSSSSKQARCFSAAADSTAFKSARSEKLRQAEE 75

Query: 105 SLRTVMYLSCWAP 111
           SLRTVMYLSCW P
Sbjct: 76  SLRTVMYLSCWGP 87

[Close]

BLAST of CSPI06G34150 vs. ExPASy TrEMBL
Match: A0A444WYC9 (Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B10g100948 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 3.1e-06
Identity = 36/83 (43.37%), Postives = 50/83 (60.24%), Query Frame = 0


Query: 34  FPAQVFGQFVTRCIQKTRDQAAKSDPAALKSLKDSSSSSSS------SSKCYSGNKFSAG 93
           + ++V  Q   R +Q  +DQ +K D + LKSLKDS+ S SS      SS  ++ +   + 
Sbjct: 66  YMSRVMYQAGVRVVQGMKDQRSKCDYSTLKSLKDSACSPSSKQARRFSSSSFNSSAIKSS 125

Query: 94  EGQNVKIAEESLRTVMYLSCWAP 111
           +   +K AEESLRTVMYLSCW P
Sbjct: 126 DSHKIKQAEESLRTVMYLSCWGP 148

[Close]

BLAST of CSPI06G34150 vs. NCBI nr
Match: KGN49179.1 (hypothetical protein Csa_003127 [Cucumis sativus])

HSP 1 Score: 216.9 bits (551), Expect = 9.2e-53
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0


Query: 1   MAKMSSTVTGCERIQMTTREREMEKPMGRIEGPFPAQVFGQFVTRCIQKTRDQAAKSDPA 60
           MAKMSSTVTGCERIQMTTREREMEKPMGRIEGPFPAQVFGQFVTRCIQKTRDQAAKSDPA
Sbjct: 1   MAKMSSTVTGCERIQMTTREREMEKPMGRIEGPFPAQVFGQFVTRCIQKTRDQAAKSDPA 60

Query: 61  ALKSLKDSSSSSSSSSKCYSGNKFSAGEGQNVKIAEESLRTVMYLSCWAPT 112
           ALKSLKDSSSSSSSSSKCYSGNKFSAGEGQNVKIAEESLRTVMYLSCWAPT
Sbjct: 61  ALKSLKDSSSSSSSSSKCYSGNKFSAGEGQNVKIAEESLRTVMYLSCWAPT 111

[Close]

BLAST of CSPI06G34150 vs. NCBI nr
Match: TYK13098.1 (wound induced protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 134.0 bits (336), Expect = 7.8e-28
Identity = 71/78 (91.03%), Postives = 73/78 (93.59%), Query Frame = 0


Query: 36  AQVFGQFVTRCIQKTRDQAAKSDPAALKSLKD--SSSSSSSSSKCYSGNKFSAGEGQNVK 95
           ++VFGQF TRCIQKTRDQA KSDPAALKSLKD  SSSSSSSSSKCYSGNK SAGEGQNVK
Sbjct: 2   SRVFGQFATRCIQKTRDQAVKSDPAALKSLKDSSSSSSSSSSSKCYSGNKLSAGEGQNVK 61

Query: 96  IAEESLRTVMYLSCWAPT 112
           IAEESLRTVMYLSCWAPT
Sbjct: 62  IAEESLRTVMYLSCWAPT 79

[Close]

BLAST of CSPI06G34150 vs. NCBI nr
Match: KAG6603727.1 (hypothetical protein SDJN03_04336, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 109.8 bits (273), Expect = 1.6e-20
Identity = 58/76 (76.32%), Postives = 64/76 (84.21%), Query Frame = 0


Query: 36  AQVFGQFVTRCIQKTRDQAAKSDPAALKSLKDSSSSSSSSSKCYSGNKFSAGEGQNVKIA 95
           ++V GQF  R +Q+TRDQA KSDPAALKSLKD  S+SSSSSKCYSGNK  AGE + VK A
Sbjct: 2   SKVLGQFAARFVQRTRDQAMKSDPAALKSLKD--STSSSSSKCYSGNKLVAGEDRKVKTA 61

Query: 96  EESLRTVMYLSCWAPT 112
           EESLRTVMYLSCWAPT
Sbjct: 62  EESLRTVMYLSCWAPT 75

[Close]

BLAST of CSPI06G34150 vs. NCBI nr
Match: KDO75696.1 (hypothetical protein CISIN_1g034643mg [Citrus sinensis])

HSP 1 Score: 62.0 bits (149), Expect = 3.8e-06
Identity = 39/73 (53.42%), Postives = 49/73 (67.12%), Query Frame = 0


Query: 45  RCIQKTRDQAAKSDPAALKSLKDSSSSSSSSSK---CYS----GNKFSAGEGQNVKIAEE 104
           R +Q  RDQA+K D +A KSLKDS+S+ SSSSK   C+S       F +   + ++ AEE
Sbjct: 16  RLMQVVRDQASKGD-SAFKSLKDSASACSSSSKQARCFSTAADSTAFKSARSEKLRQAEE 75

Query: 105 SLRTVMYLSCWAP 111
           SLRTVMYLSCW P
Sbjct: 76  SLRTVMYLSCWGP 87

[Close]

BLAST of CSPI06G34150 vs. NCBI nr
Match: KAF9611510.1 (hypothetical protein IFM89_032556 [Coptis chinensis])

HSP 1 Score: 62.0 bits (149), Expect = 3.8e-06
Identity = 36/76 (47.37%), Postives = 50/76 (65.79%), Query Frame = 0


Query: 34  FPAQVFGQFVTRCIQKTRDQAAKSDPA-ALKSLKDSSSSSSSSSKCYSGNKFSAGEGQNV 93
           + ++VF Q   R +Q  +DQA+K D A  ++SLKDS+SSSS   + +S  + +    +  
Sbjct: 5   YMSRVFYQVSMRAVQGMKDQASKCDSATTIRSLKDSTSSSSKQIRRFSNAQVAKNRNEKQ 64

Query: 94  KIAEESLRTVMYLSCW 109
           K AEESLRTVMYLSCW
Sbjct: 65  KKAEESLRTVMYLSCW 80

[Close]

BLAST of CSPI06G34150 vs. TAIR 10
Match: AT4G10270.1 (Wound-responsive family protein )

HSP 1 Score: 42.0 bits (97), Expect = 3.8e-04
Identity = 23/47 (48.94%), Postives = 28/47 (59.57%), Query Frame = 0


Query: 64  SLKDSSSSSSSSSKCYSGNKFSAGEGQNVKIAEESLRTVMYLSCWAP 111
           +++  S     SS   S    S+GE +  K AEESLRTVMYLSCW P
Sbjct: 43  NVRSVSQGKRFSSSSVSAAVTSSGESEKAKKAEESLRTVMYLSCWGP 89

The following BLAST results are available for this feature:

BLAST of CSPI06G34150 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI06G34150 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KK17	4.4e-53	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G516870 PE=4 SV=1	[more]
A0A5D3CPJ3	3.8e-28	91.03	Wound induced protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A067GK87	1.8e-06	53.42	Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g034643mg PE=4 SV=1	[more]
V4UE40	1.8e-06	53.42	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10017323mg PE=4 ...	[more]
A0A444WYC9	3.1e-06	43.37	Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B10g100948 PE=4 SV=1	[more]

BLAST of CSPI06G34150 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN49179.1	9.2e-53	100.00	hypothetical protein Csa_003127 [Cucumis sativus]	[more]
TYK13098.1	7.8e-28	91.03	wound induced protein-like [Cucumis melo var. makuwa]	[more]
KAG6603727.1	1.6e-20	76.32	hypothetical protein SDJN03_04336, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KDO75696.1	3.8e-06	53.42	hypothetical protein CISIN_1g034643mg [Citrus sinensis]	[more]
KAF9611510.1	3.8e-06	47.37	hypothetical protein IFM89_032556 [Coptis chinensis]	[more]

BLAST of CSPI06G34150 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G10270.1	3.8e-04	48.94	Wound-responsive family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022251	Protein of unknown function wound-induced	PFAM	PF12609	DUF3774	coord: 49..110 e-value: 8.9E-11 score: 42.7
IPR022251	Protein of unknown function wound-induced	PANTHER	PTHR33090	DUF3774 DOMAIN PROTEIN-RELATED	coord: 40..111
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 63..86
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..86
None	No IPR available	PANTHER	PTHR33090:SF68	OSJNBA0043L09.16 PROTEIN	coord: 40..111

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G34150.1	CSPI06G34150.1	mRNA