CSPI06G33440 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI06G33440
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	U3 small nucleolar RNA-associated protein 6 homolog
Location	Chr6: 27802306 .. 27805465 (-)
RNA-Seq Expression	CSPI06G33440
Synteny	CSPI06G33440

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGACGTCGTGCAGTTCCGTCTCGAGGGCATGGTCGACGAGCTCGATGACTTCGAGAAACGTGGCCTCTTCTCCCGGCGAGAGATTGCTGAGATTGTAAAGCAACGGCGCAAGTTCGAGTACCGTCTGAAGCGCCCTTGTCCTCTTAAGCAGGACTATCTTACTTATATCGATTATGAGATTCAGTTGGAGTCGCTTCGTCGTCTAAGGAAGAAGGCAGTGGCTCGCGAACTTAAGAAGCAGGGAGATAAAAAGATGAAAAAGTCTATTTCCGACTTCGCCGGTGTGAAAAGGATCTTGTACATTTATCGGCTTGCGGTTACTAGGTATAAGGGTGATATTGATCTTTGGTTTCGCTATCTCGAGTTTTGTAGAGCACGAAAGAACGGGACAATGAAAAAGGTATTACATTTTATTCCAGTTTTGGATTAAATTAATGTACATTTTGATCTATGGTTCTTTTGTTGTAGAAATGAGATGATATGGAAGTAGTTGAAGTCAGTCTGTTGATACTTGAGGTTACTTGTGTCGATATCGATCCTTTTTCTTTCAATTTTTGCAGGTTCTAGCTCAGCTGATTAGATTCCACCCAAAAGTTCCTGGGGTTTGGATATATGCTGCTGCTTGGGAGTTTGATCATAATATCAATGTGGATGCAGCACGTTCTCTTATGTTAAGTGGTTTGAGAGTTTGCCCAACTTCAGAGGACCTTTGGATAGAATATTTGCGGATGGAACTTACTTATCTTAATAAGTTGAAGGCTCGGAAGGTTGCCCTTGGAGAGGACGAGGGAAGTCTGGTCCGTGAAAATATAACTGCTGCGGAGAAACAGTGGAGAGAAGAAAATAAAGATCTGTTCATGTCAATGGGTGAAACAAGGGGAGATAATGATGAATCAGGTGTCGAAACGTTGTCAAAGGATAAATTGGATTTGTTTCGAGAAAAAGGTTCAAACCTTTTAGAAACTATCTACAGTGGAGCAATTGAAGCTCTACCTTCAAGTTTTAGTTTGAGAAAGCGTGTCTTAGAGATATTGGAAGCAATGGATTTAGCTCATTCAGAAGAAATGCAGTCAAAAATATTACAGGATATAAAAAGAGACTTCGCTTCACAACCACAATATTGGGACTGGCTAGCTAGACTTTACTGTAATCCTGAAAATGTGCAGGGAACGAGTGATATAAAGGAAATTTCTCGGATTGAAAAGGCTGTCAAGGTGTGAATTTTTATGCATGATGAAAATCACAATTATGTCAAATCTGTATAGTTATAGTATGCGTTTTCTTCGGTGATGATAAATGGTAGTTTAAGGAAGCATATATTTCTTCATTTAGAAAATTACTAAATCTAGAAAAGTACGTACTACGACATTTGTTTATTTGAAACTATGTGAGCAACTTATGTGTCTGCTTTTTTCCCATGAGTATCTAAGGTTTGTTTTTTTGTCTATGAATGTCTAAAATTTTCTTTTTCCATGCTTACAAACAACAGGTCTACGAGGAAGGCCTGGAGTGTGTGCCTTCATCTGCAATTTTTAGCTTGTATGTGGAATTTTTGAGGAGTATCATTGTTCCTGTTAAGGGTGAACAAACCTTGGGGCTATCCAGTCATACTGATAACATTACTTCGCGACTCTTGATGGTTTATGAAAAGGCTCTAACTTTAGGACATATTACAGACGATTTAGCATGCCAATATGTTTTGTTTTATTTGGAACTAGGGAGATTGGATGAAGCACAGAAGCTTGCAGAAAGACTCTGTAGTGGAAAATTTTCTAATTCTGTGAAGTTGTGGGTATTGAGAGTCTCCACGGAGATAAAATGCGTTTTGAAGGATTCTCCTTCTCCAAGTAAGGACGATCTGAAATCCATTTTTGAACTGACAAAAGAGGTTCTGAAAAAATTTTCTGTTTCGGAATCTGGGAGCCTGTGGCTAAAGGTATATCTGCTGCACCTTAACAAAACTTCGAGCCTTGATATATTTAGTTTTGTGAAAAACGATATTAATCTTCAATTTACCTGGTTTTATTGGTTTGAAATGTATGATTTTTGCCATAAATGGTTTAATGGCATTTTGCTCACTCGAGCTTACATGTTTAATATATTTGGAATGTTCAAGACATTGTGACTCTGGTGGTAATTAGAAGTAAAAACCTGAACCCTTGTTATTCTGGTTTACTTACTGCAGGTCCTCAAATTTTTTGCCAATCAGAGTTATTATTTTGACAAATTGGTGGAAATTTCACTTTATGCATTGGCTAAATCTGGTGGAAATGAGGATGGATTTTCACTCTCCTCAGTCATTGTTGATTTTGTTCTACAAAAAGATGGAATTCAGCGTACAAGGGAGGTGTATAAGAAGTATGCATTCAATCCTGGATAATTCTTCTCGGTTAAAATATTATTTTGGTCTTTGTAATTTGAGTCTTAATTCTTCTTGAATCTATCTACTTTCAAAGGTTTACATTTAATCCCGTTCTTTCAATGACCGTTAAAGTTGATTGTTAGTGTTAGTTTGAACTTAGTTTTAGTGGACCAAAATGGTATTTTAATTCATTCCTCTTTTATAAGAATATCTGTCTGTTTTGCGGAGTTTCTTAAATCAGCCTCTAAAACCGTGTTTCCTTTGTTTCAACAGATTTCTTGGATTACCCCATCCAGGGCTTGCTATGTACCAAACATGTATTCAGCTGGAATCCAACCTTGCAACTGCAGGGGATAAAGATGGTCTTGCAAATGCTCGAAAGCTATTTGAATCTGCACTTGCAACTTATGGCCAAAATGTTCGTTTATGGCAAGAGTACTACACATTGGAATCTAAGGTAACCTTGCAGTTTCCGTATAATCTAGAAATGTGTACATATTTAATTCCCCCCCCCCCCAATAGGTCATGGTTATGGAATCATGCTATTTTGAACATGGCATCTTTTGTCCATCTTCATTCTCTGTTTTACATCCTGACAGATCGAACAAATTGCATCATTGTTGTTTTTCCTGCTACATTTTACATGAAAGTGTTGTCCACTAATCCTCCAATGTATTCATGAGTTCGTTCTTCCTTACAGATAGGATCATCGGAAACAGCAGCTGCAGTTCGTTGGCGTGCAAGGAAAACATTAAAAGATGCTACAGCCCTTGCTACGTCCTCTGATTTGTGA

mRNA sequence

ATGGCGGACGTCGTGCAGTTCCGTCTCGAGGGCATGGTCGACGAGCTCGATGACTTCGAGAAACGTGGCCTCTTCTCCCGGCGAGAGATTGCTGAGATTGTAAAGCAACGGCGCAAGTTCGAGTACCGTCTGAAGCGCCCTTGTCCTCTTAAGCAGGACTATCTTACTTATATCGATTATGAGATTCAGTTGGAGTCGCTTCGTCGTCTAAGGAAGAAGGCAGTGGCTCGCGAACTTAAGAAGCAGGGAGATAAAAAGATGAAAAAGTCTATTTCCGACTTCGCCGGTGTGAAAAGGATCTTGTACATTTATCGGCTTGCGGTTACTAGGTATAAGGGTGATATTGATCTTTGGTTTCGCTATCTCGAGTTTTGTAGAGCACGAAAGAACGGGACAATGAAAAAGGTTCTAGCTCAGCTGATTAGATTCCACCCAAAAGTTCCTGGGGTTTGGATATATGCTGCTGCTTGGGAGTTTGATCATAATATCAATGTGGATGCAGCACGTTCTCTTATGTTAAGTGGTTTGAGAGTTTGCCCAACTTCAGAGGACCTTTGGATAGAATATTTGCGGATGGAACTTACTTATCTTAATAAGTTGAAGGCTCGGAAGGTTGCCCTTGGAGAGGACGAGGGAAGTCTGGTCCGTGAAAATATAACTGCTGCGGAGAAACAGTGGAGAGAAGAAAATAAAGATCTGTTCATGTCAATGGGTGAAACAAGGGGAGATAATGATGAATCAGGTGTCGAAACGTTGTCAAAGGATAAATTGGATTTGTTTCGAGAAAAAGGTTCAAACCTTTTAGAAACTATCTACAGTGGAGCAATTGAAGCTCTACCTTCAAGTTTTAGTTTGAGAAAGCGTGTCTTAGAGATATTGGAAGCAATGGATTTAGCTCATTCAGAAGAAATGCAGTCAAAAATATTACAGGATATAAAAAGAGACTTCGCTTCACAACCACAATATTGGGACTGGCTAGCTAGACTTTACTGTAATCCTGAAAATGTGCAGGGAACGAGTGATATAAAGGAAATTTCTCGGATTGAAAAGGCTGTCAAGGTCTACGAGGAAGGCCTGGAGTGTGTGCCTTCATCTGCAATTTTTAGCTTGTATGTGGAATTTTTGAGGAGTATCATTGTTCCTGTTAAGGGTGAACAAACCTTGGGGCTATCCAGTCATACTGATAACATTACTTCGCGACTCTTGATGGTTTATGAAAAGGCTCTAACTTTAGGACATATTACAGACGATTTAGCATGCCAATATGTTTTGTTTTATTTGGAACTAGGGAGATTGGATGAAGCACAGAAGCTTGCAGAAAGACTCTGTAGTGGAAAATTTTCTAATTCTGTGAAGTTGTGGGTATTGAGAGTCTCCACGGAGATAAAATGCGTTTTGAAGGATTCTCCTTCTCCAAGTAAGGACGATCTGAAATCCATTTTTGAACTGACAAAAGAGGTTCTGAAAAAATTTTCTGTTTCGGAATCTGGGAGCCTGTGGCTAAAGGTCCTCAAATTTTTTGCCAATCAGAGTTATTATTTTGACAAATTGGTGGAAATTTCACTTTATGCATTGGCTAAATCTGGTGGAAATGAGGATGGATTTTCACTCTCCTCAGTCATTGTTGATTTTGTTCTACAAAAAGATGGAATTCAGCGTACAAGGGAGGTGTATAAGAAATTTCTTGGATTACCCCATCCAGGGCTTGCTATGTACCAAACATGTATTCAGCTGGAATCCAACCTTGCAACTGCAGGGGATAAAGATGGTCTTGCAAATGCTCGAAAGCTATTTGAATCTGCACTTGCAACTTATGGCCAAAATGTTCGTTTATGGCAAGAGTACTACACATTGGAATCTAAGATAGGATCATCGGAAACAGCAGCTGCAGTTCGTTGGCGTGCAAGGAAAACATTAAAAGATGCTACAGCCCTTGCTACGTCCTCTGATTTGTGA

Coding sequence (CDS)

ATGGCGGACGTCGTGCAGTTCCGTCTCGAGGGCATGGTCGACGAGCTCGATGACTTCGAGAAACGTGGCCTCTTCTCCCGGCGAGAGATTGCTGAGATTGTAAAGCAACGGCGCAAGTTCGAGTACCGTCTGAAGCGCCCTTGTCCTCTTAAGCAGGACTATCTTACTTATATCGATTATGAGATTCAGTTGGAGTCGCTTCGTCGTCTAAGGAAGAAGGCAGTGGCTCGCGAACTTAAGAAGCAGGGAGATAAAAAGATGAAAAAGTCTATTTCCGACTTCGCCGGTGTGAAAAGGATCTTGTACATTTATCGGCTTGCGGTTACTAGGTATAAGGGTGATATTGATCTTTGGTTTCGCTATCTCGAGTTTTGTAGAGCACGAAAGAACGGGACAATGAAAAAGGTTCTAGCTCAGCTGATTAGATTCCACCCAAAAGTTCCTGGGGTTTGGATATATGCTGCTGCTTGGGAGTTTGATCATAATATCAATGTGGATGCAGCACGTTCTCTTATGTTAAGTGGTTTGAGAGTTTGCCCAACTTCAGAGGACCTTTGGATAGAATATTTGCGGATGGAACTTACTTATCTTAATAAGTTGAAGGCTCGGAAGGTTGCCCTTGGAGAGGACGAGGGAAGTCTGGTCCGTGAAAATATAACTGCTGCGGAGAAACAGTGGAGAGAAGAAAATAAAGATCTGTTCATGTCAATGGGTGAAACAAGGGGAGATAATGATGAATCAGGTGTCGAAACGTTGTCAAAGGATAAATTGGATTTGTTTCGAGAAAAAGGTTCAAACCTTTTAGAAACTATCTACAGTGGAGCAATTGAAGCTCTACCTTCAAGTTTTAGTTTGAGAAAGCGTGTCTTAGAGATATTGGAAGCAATGGATTTAGCTCATTCAGAAGAAATGCAGTCAAAAATATTACAGGATATAAAAAGAGACTTCGCTTCACAACCACAATATTGGGACTGGCTAGCTAGACTTTACTGTAATCCTGAAAATGTGCAGGGAACGAGTGATATAAAGGAAATTTCTCGGATTGAAAAGGCTGTCAAGGTCTACGAGGAAGGCCTGGAGTGTGTGCCTTCATCTGCAATTTTTAGCTTGTATGTGGAATTTTTGAGGAGTATCATTGTTCCTGTTAAGGGTGAACAAACCTTGGGGCTATCCAGTCATACTGATAACATTACTTCGCGACTCTTGATGGTTTATGAAAAGGCTCTAACTTTAGGACATATTACAGACGATTTAGCATGCCAATATGTTTTGTTTTATTTGGAACTAGGGAGATTGGATGAAGCACAGAAGCTTGCAGAAAGACTCTGTAGTGGAAAATTTTCTAATTCTGTGAAGTTGTGGGTATTGAGAGTCTCCACGGAGATAAAATGCGTTTTGAAGGATTCTCCTTCTCCAAGTAAGGACGATCTGAAATCCATTTTTGAACTGACAAAAGAGGTTCTGAAAAAATTTTCTGTTTCGGAATCTGGGAGCCTGTGGCTAAAGGTCCTCAAATTTTTTGCCAATCAGAGTTATTATTTTGACAAATTGGTGGAAATTTCACTTTATGCATTGGCTAAATCTGGTGGAAATGAGGATGGATTTTCACTCTCCTCAGTCATTGTTGATTTTGTTCTACAAAAAGATGGAATTCAGCGTACAAGGGAGGTGTATAAGAAATTTCTTGGATTACCCCATCCAGGGCTTGCTATGTACCAAACATGTATTCAGCTGGAATCCAACCTTGCAACTGCAGGGGATAAAGATGGTCTTGCAAATGCTCGAAAGCTATTTGAATCTGCACTTGCAACTTATGGCCAAAATGTTCGTTTATGGCAAGAGTACTACACATTGGAATCTAAGATAGGATCATCGGAAACAGCAGCTGCAGTTCGTTGGCGTGCAAGGAAAACATTAAAAGATGCTACAGCCCTTGCTACGTCCTCTGATTTGTGA

Protein sequence

MADVVQFRLEGMVDELDDFEKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDYEIQLESLRRLRKKAVARELKKQGDKKMKKSISDFAGVKRILYIYRLAVTRYKGDIDLWFRYLEFCRARKNGTMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCPTSEDLWIEYLRMELTYLNKLKARKVALGEDEGSLVRENITAAEKQWREENKDLFMSMGETRGDNDESGVETLSKDKLDLFREKGSNLLETIYSGAIEALPSSFSLRKRVLEILEAMDLAHSEEMQSKILQDIKRDFASQPQYWDWLARLYCNPENVQGTSDIKEISRIEKAVKVYEEGLECVPSSAIFSLYVEFLRSIIVPVKGEQTLGLSSHTDNITSRLLMVYEKALTLGHITDDLACQYVLFYLELGRLDEAQKLAERLCSGKFSNSVKLWVLRVSTEIKCVLKDSPSPSKDDLKSIFELTKEVLKKFSVSESGSLWLKVLKFFANQSYYFDKLVEISLYALAKSGGNEDGFSLSSVIVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLATAGDKDGLANARKLFESALATYGQNVRLWQEYYTLESKIGSSETAAAVRWRARKTLKDATALATSSDL*

Homology

[Close]

BLAST of CSPI06G33440 vs. ExPASy Swiss-Prot
Match: Q8VCY6 (U3 small nucleolar RNA-associated protein 6 homolog OS=Mus musculus OX=10090 GN=Utp6 PE=2 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 3.3e-44
Identity = 160/662 (24.17%), Postives = 284/662 (42.90%), Query Frame = 0


Query: 1   MADVVQFRLEGMVDELDDFEKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDY 60
           MA+++Q R+E  + EL+  E+ GLFS  EI  I+K+    EY++ R   LK+D++ Y+ Y
Sbjct: 1   MAEIIQERIEDRIPELEQLERIGLFSHAEIKAIIKKASDLEYKIHRRTLLKEDFINYVQY 60

Query: 61  EIQLESLRRLRKKAVARELKKQGDKKMKKSISDFAGVKRILYIYRLAVTRYKGDIDLWFR 120
           EI L  L + R+  +    KK           +++ V R+  ++  A  ++K D+ LW  
Sbjct: 61  EINLLELIQRRRARIKYSFKKDE--------IEYSMVHRVQGVFGRASAKWKDDVQLWLS 120

Query: 121 YLEFCRARKNGT-MKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVC 180
           Y+ FC+     T + K+ + ++  H   P +WI AA WE +  ++ ++AR L L  LR  
Sbjct: 121 YIVFCKKWGTKTHLSKIFSAMLAIHSNKPALWIMAAKWEMEDRLSSESARQLFLRALRFH 180

Query: 181 PTSEDLWIEYLRMELTYLNKLKARKVALGEDEGSLVRENITAAEKQWREENKDLFMSMGE 240
           P    L+ EY RMEL +  KL+  K                       +E +   M MG+
Sbjct: 181 PECPKLYQEYFRMELMHAEKLRKEK-----------------------QEFEKAAMDMGD 240

Query: 241 TRGDNDESGVETLSKDKLDLFREKGSNLLETIYSGAIEALPSSFSLRKRVLEILEAMDLA 300
              D+ E  ++                L   IY  +I  +  +      +L I +  D A
Sbjct: 241 F--DHPEEILK--------------GELARIIYKNSISKIKGA-EFHVSLLAIAQLFDFA 300

Query: 301 HSEEMQSKILQDIKRDFASQPQYWDWLARLYCNPENVQGTSD--------IKEISRIEKA 360
             +++Q +I  D++      P  WD++AR     E+  G           ++   R E+ 
Sbjct: 301 --KDLQKEIYDDLQALHTDDPLTWDYVARRELEIESQPGEEQPVSKQAKAVEMGRREERC 360

Query: 361 VKVYEEGLECVPSSAIFSLYVEFL------RSIIVPVKGEQTLGLSSHTDNITSRLLMVY 420
             VYEE ++ +P+ A++  Y+ F       ++  VP++G++             R ++ +
Sbjct: 361 CAVYEEAVKALPTEAMWKCYITFCLERFSKKTSSVPLRGQR-----------LERTMLAF 420

Query: 421 EKALTLGHITDDLACQYVLFYLELGRLDEAQKLAERLCSGKFSNSVKLWVLRVSTEIKCV 480
            KA  L  +++    Q++   L      EA ++AE   +  F +SV +W  ++      V
Sbjct: 421 RKAHELKLLSEVQYKQWIDLLLRQDLFKEALQVAE-AGTELFKDSVTMWQTKLQ-----V 480

Query: 481 LKDSPSPSKDDLKSIFELTKEVLKKFSVSESGSLWLKVLKFFANQSYYFDKLVEISLYAL 540
           L DS SP   D++  FE   E            LW+   ++  +     D         +
Sbjct: 481 LIDSKSP---DVEMRFE---EAFAHLKPQVCLPLWISWAEWSESAKSQEDTEAIFKKAII 540

Query: 541 AKSGGNEDGFSLSSVIVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLATA 600
           A +G +    +L    +D+  +  G ++ R V+K         +  ++  +Q E      
Sbjct: 541 AVTGAS--SVTLKEKYLDWAYRSGGYKKARAVFKSLQESRPFSVEFFRKMMQFEKE---- 583

Query: 601 GDKDGLANARKLFESALATYG-QNVRLWQEYY--TLESKIGSSETAAAVRWRARKTLKDA 645
            +   + N R+ +E AL  +G  +  LW +Y    L    G  E    + WRA K L+  
Sbjct: 601 QEPCKMVNLREYYERALREFGTSDSDLWMDYIKEELNHPFGKPENCGQIYWRAMKMLQGQ 583

[Close]

BLAST of CSPI06G33440 vs. ExPASy Swiss-Prot
Match: Q9NYH9 (U3 small nucleolar RNA-associated protein 6 homolog OS=Homo sapiens OX=9606 GN=UTP6 PE=1 SV=2)

HSP 1 Score: 176.4 bits (446), Expect = 1.0e-42
Identity = 162/659 (24.58%), Postives = 281/659 (42.64%), Query Frame = 0


Query: 1   MADVVQFRLEGMVDELDDFEKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDY 60
           MA+++Q R+E  + EL+  E+ GLFS  EI  I+K+    EY+++R    K+D++ Y+ Y
Sbjct: 1   MAEIIQERIEDRLPELEQLERIGLFSHAEIKAIIKKASDLEYKIQRRTLFKEDFINYVQY 60

Query: 61  EIQLESLRRLRKKAVARELKKQGDKKMKKSISDFAGVKRILYIYRLAVTRYKGDIDLWFR 120
           EI L  L + R+  +    KK    +++ SI     V R+  +++ A  ++K D+ LW  
Sbjct: 61  EINLLELIQRRRTRIGYSFKKD---EIENSI-----VHRVQGVFQRASAKWKDDVQLWLS 120

Query: 121 YLEFCRARKNGT-MKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVC 180
           Y+ FC+     T + KV + ++  H   P +WI AA WE +  ++ ++AR L L  LR  
Sbjct: 121 YVAFCKKWATKTRLSKVFSAMLAIHSNKPALWIMAAKWEMEDRLSSESARQLFLRALRFH 180

Query: 181 PTSEDLWIEYLRMELTYLNKLKARKVALGEDEGSLVRENITAAEKQWREENKDLFMSMGE 240
           P    L+ EY RMEL +  KL+  K                   +++ + + D+      
Sbjct: 181 PECPKLYKEYFRMELMHAEKLRKEK-------------------EEFEKASMDV------ 240

Query: 241 TRGDNDESGVETLSKDKLDLFREKGSNLLETIYSGAIEALPSSFSLRKRVLEILEAMDLA 300
              +N +   E L              L   IY  ++  +  +      +L I +  D A
Sbjct: 241 ---ENPDYSEEILK-----------GELAWIIYKNSVSIIKGA-EFHVSLLSIAQLFDFA 300

Query: 301 HSEEMQSKILQDIKRDFASQPQYWDWLAR----LYCNPENVQGTSDIKEIS---RIEKAV 360
             +++Q +I  D++      P  WD++AR    +    E    T   K +    + E+  
Sbjct: 301 --KDLQKEIYDDLQALHTDDPLTWDYVARRELEIESQTEEQPTTKQAKAVEVGRKEERCC 360

Query: 361 KVYEEGLECVPSSAIFSLYVEFLRSIIVPVKGEQTLGLSSHTDNITSRLLMVYEKALTLG 420
            VYEE ++ +P+ A++  Y+ F             L           R + V+ KA  L 
Sbjct: 361 AVYEEAVKTLPTEAMWKCYITFCLERFTKKSNSGFL-----RGKRLERTMTVFRKAHELK 420

Query: 421 HITDDLACQYVLFYLELGRLDEAQKLAERLCSGK--FSNSVKLWVLRVSTEIKCVLKDSP 480
            +++   CQY    + L   +  ++  E   +G   F +S  +W L++      VL +S 
Sbjct: 421 LLSE---CQYKQLSVSLLCYNFLREALEVAVAGTELFRDSGTMWQLKLQ-----VLIESK 480

Query: 481 SPSKDDLKSIFELTKEVLKKFSVSESGSLWLKVLKFFANQSYYFDKLVEISLYALAKSGG 540
           SP   D+  +FE   E            LW+   ++        D         LA  G 
Sbjct: 481 SP---DIAMLFE---EAFVHLKPQVCLPLWISWAEWSEGAKSQEDTEAVFKKALLAVIGA 540

Query: 541 NEDGFSLSSVIVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLATAGDKDG 600
             D  +L +  +D+  +  G ++ R V+K         +  ++  IQ E    +      
Sbjct: 541 --DSVTLKNKYLDWAYRSGGYKKARAVFKSLQESRPFSVDFFRKMIQFEKEQESC----N 584

Query: 601 LANARKLFESALATYGQ-NVRLWQEYY--TLESKIGSSETAAAVRWRARKTLKDATALA 647
           +AN R+ +E AL  +G  +  LW +Y    L   +G  E    + WRA K L+  +A A
Sbjct: 601 MANIREYYERALREFGSADSDLWMDYMKEELNHPLGRPENCGQIYWRAMKMLQGESAEA 584

[Close]

BLAST of CSPI06G33440 vs. ExPASy Swiss-Prot
Match: Q54WN5 (U3 small nucleolar RNA-associated protein 6 homolog OS=Dictyostelium discoideum OX=44689 GN=utp6 PE=1 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 2.6e-33
Identity = 146/592 (24.66%), Postives = 269/592 (45.44%), Query Frame = 0


Query: 3   DVVQFRLEGMVDELDDFEKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDYEI 62
           D V F ++ +++E       G+ S++E  +I+K+R   E ++      K D+LTYI YE+
Sbjct: 2   DRVNFSIDQLLEETSKLVSLGIISKQECKDIMKKREYHEIKIFNRNSHKSDFLTYIKYEL 61

Query: 63  QLESLRRLRKKAVARELKKQGDKKMKKSISDFAGVKRILYIYRLAVTRYKGDIDLWFRYL 122
           +L+ L   R KA   E     D +++ ++      +  + ++  A  ++  D  LW   L
Sbjct: 62  ELDRLFHKRGKAKNIEF----DYRLRSAL------RHAIILFGSATKKFPKDEALWINAL 121

Query: 123 --EFCRARKNGTMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCP 182
                RA K GT +     L    P+   +W  AA +EF+ N N+  AR+L+ +G++   
Sbjct: 122 NIRMKRASKEGTGRLFSIALSNL-PRSAKLWKLAATFEFEVNKNIQNARNLIQAGIQFNK 181

Query: 183 TSEDLWIEYLRMELTYLNKLKAR----KVALGEDEGSLVRENITAAEKQWREENKDLFMS 242
           T + LW  +  MELTY++ L +        + E+E   ++ N+ +  K  + E KD F++
Sbjct: 182 TDKSLWHYFFLMELTYISLLFSDITFIDKKIEEEEEEAIKLNLDSLRKSEKIE-KDEFIT 241

Query: 243 MGETRGDNDESGVETLSKDKLDLFREKGSNLLETIYSGAIE-ALPSSFSLRKRVLEIL-E 302
            G+          E LS DKL         + + ++  AI+ ++   F  RK   +I  +
Sbjct: 242 FGK----------EILSADKLKQSSLIRGQIAQIVFRKAIKSSIGQDFDFRKHFYKIASK 301

Query: 303 AMDLAHSEE--------MQSKILQDIKRDFASQPQYWDWLARLYCNPENVQGTSDIKEIS 362
            +D+    E        +Q +IL+ +  DF +  + + +LA +         +S+   + 
Sbjct: 302 FLDIGKDSENPMGAGELLQKEILESLVTDFPNDDKTYIFLASI-----EQSKSSEPSLLK 361

Query: 363 RIEKAVKVYEEGLECVPSSAIFSLYVEFLRSIIVPVKGEQTLGLSSHTDNITSRLLMVYE 422
           R+  + K+  +GL  + S +    Y+ F+R IIV +K    L  +   +NIT  LL  Y+
Sbjct: 362 RLNNSTKILNQGLTIIKSESYLFNYIHFIRQIIVDIK----LKENKLIENITDILLKAYK 421

Query: 423 KALTLGHITDDLACQYVLFYLELGRLDEAQKLAERLCSGKFSNSVKLWVLRVSTEIK--- 482
            ++    + +     Y+   LELG+ ++A K++E      F NS +LW  R++  IK   
Sbjct: 422 YSIDNNILKESGYQYYIELLLELGKTNDAIKVSEESVK-LFKNSNQLWNQRINLLIKNEM 481

Query: 483 -CVLKDSPSPSKD--DLKSIFEL--------TKEVLKKFSVSESGSLWLKVLKFFANQSY 542
              L D+ S + +  ++   FE+        T       S S S +L+++  K+     +
Sbjct: 482 VVKLFDNLSNNNEYNNIDKCFEMAVKNCTSSTTSTTSSTSTSSSSNLFIEYFKY--QVVF 541

Query: 543 YFDKLVEISLYALAKSGGNEDGFSLSSVIVDFVLQKDGIQRTREVYKKFLGL 565
            FDK  +  +    K     D F    ++ +    +  I   R +Y+K L +
Sbjct: 542 KFDKDYKKIVDLFEKLLKQLDEFYQKCILYEEERIEKNINDIRSLYEKCLSI 559

[Close]

BLAST of CSPI06G33440 vs. ExPASy Swiss-Prot
Match: O60188 (U3 small nucleolar RNA-associated protein 6 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=utp6 PE=3 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 6.0e-30
Identity = 83/221 (37.56%), Postives = 124/221 (56.11%), Query Frame = 0


Query: 1   MADVVQFRLEGMVDELDDFEKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDY 60
           MA+ VQ+ +E  V EL+D  ++ +F+R EI  I+K RR FE +L R      D+L+YI Y
Sbjct: 1   MAEKVQYYMEQSVPELEDLLEKNIFNRDEINNIIKTRRVFEEKLARRQVKLNDFLSYIQY 60

Query: 61  EIQLESLRRLRKKAVARELKKQGDKKMKKSISDFAGVKRILYIYRLAVTRYKGDIDLWFR 120
           EI LE+LR  R K     L   G    K +ISD+AG +++L+++  A  ++ GD+ LW  
Sbjct: 61  EINLETLRAKRHK----RLNITG----KITISDYAGPRKVLFLFLRATNKFFGDVTLWLD 120

Query: 121 YLEFCRARKN-GTMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVC 180
           Y+ + +  K    + K+    ++ HP    +W+ A   EF  N NV AAR+LM   LR+ 
Sbjct: 121 YIHYAQKIKAVNIVGKICVAALQKHPNNAELWVVACDHEFSINANVSAARALMNRALRLN 180

Query: 181 PTSEDLWIEYLRMELTYLNKLKARKVALGEDEGSLVRENIT 221
             +  +W  Y R+EL+Y+ KL AR   L  +  S   ENIT
Sbjct: 181 QENPVIWAAYFRLELSYMTKLFARSQILTGNISSKT-ENIT 212

[Close]

BLAST of CSPI06G33440 vs. ExPASy Swiss-Prot
Match: Q02354 (U3 small nucleolar RNA-associated protein 6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=UTP6 PE=1 SV=2)

HSP 1 Score: 122.5 bits (306), Expect = 1.8e-26
Identity = 71/229 (31.00%), Postives = 122/229 (53.28%), Query Frame = 0


Query: 6   QFRLEGMVDELDDFEKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDYEIQLE 65
           ++ LE  + E+DD  ++GLF++ E++ I+K+R  FE+RL        DY+ YI+YE  + 
Sbjct: 5   RYYLEQCIPEMDDLVEKGLFTKNEVSLIMKKRTDFEHRLNSRGSSINDYIKYINYESNVN 64

Query: 66  SLRRLRKKAVARELKKQGDKKMKKSISDFAGVKRILYIYRLAVTRYKGDIDLWFRYLEFC 125
            LR  R K + +        K   S+SD++  +RI +IY+    ++  D+  W  YL + 
Sbjct: 65  KLRAKRCKRILQ-------VKKTNSLSDWSIQQRIGFIYQRGTNKFPQDLKFWAMYLNYM 124

Query: 126 RARKNGTMKK----VLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCPT 185
           +AR N T  K    +  QL++ HP    +WI  A +E++ + N  + R++  +GLR  P 
Sbjct: 125 KARGNQTSYKKIHNIYNQLLKLHPTNVDIWISCAKYEYEVHANFKSCRNIFQNGLRFNPD 184

Query: 186 SEDLWIEYLRMELTYLNKLKARKVALGEDEGSLVRENITAAEKQWREEN 231
              LW EY++ EL ++ KL  R+  +G     L+ E     + Q  ++N
Sbjct: 185 VPKLWYEYVKFELNFITKLINRRKVMG-----LINEREQELDMQNEQKN 221

[Close]

BLAST of CSPI06G33440 vs. ExPASy TrEMBL
Match: A0A0A0KJV9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G513630 PE=3 SV=1)

HSP 1 Score: 1276.5 bits (3302), Expect = 0.0e+00
Identity = 651/651 (100.00%), Postives = 651/651 (100.00%), Query Frame = 0


Query: 1   MADVVQFRLEGMVDELDDFEKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDY 60
           MADVVQFRLEGMVDELDDFEKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDY
Sbjct: 1   MADVVQFRLEGMVDELDDFEKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDY 60

Query: 61  EIQLESLRRLRKKAVARELKKQGDKKMKKSISDFAGVKRILYIYRLAVTRYKGDIDLWFR 120
           EIQLESLRRLRKKAVARELKKQGDKKMKKSISDFAGVKRILYIYRLAVTRYKGDIDLWFR
Sbjct: 61  EIQLESLRRLRKKAVARELKKQGDKKMKKSISDFAGVKRILYIYRLAVTRYKGDIDLWFR 120

Query: 121 YLEFCRARKNGTMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCP 180
           YLEFCRARKNGTMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCP
Sbjct: 121 YLEFCRARKNGTMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCP 180

Query: 181 TSEDLWIEYLRMELTYLNKLKARKVALGEDEGSLVRENITAAEKQWREENKDLFMSMGET 240
           TSEDLWIEYLRMELTYLNKLKARKVALGEDEGSLVRENITAAEKQWREENKDLFMSMGET
Sbjct: 181 TSEDLWIEYLRMELTYLNKLKARKVALGEDEGSLVRENITAAEKQWREENKDLFMSMGET 240

Query: 241 RGDNDESGVETLSKDKLDLFREKGSNLLETIYSGAIEALPSSFSLRKRVLEILEAMDLAH 300
           RGDNDESGVETLSKDKLDLFREKGSNLLETIYSGAIEALPSSFSLRKRVLEILEAMDLAH
Sbjct: 241 RGDNDESGVETLSKDKLDLFREKGSNLLETIYSGAIEALPSSFSLRKRVLEILEAMDLAH 300

Query: 301 SEEMQSKILQDIKRDFASQPQYWDWLARLYCNPENVQGTSDIKEISRIEKAVKVYEEGLE 360
           SEEMQSKILQDIKRDFASQPQYWDWLARLYCNPENVQGTSDIKEISRIEKAVKVYEEGLE
Sbjct: 301 SEEMQSKILQDIKRDFASQPQYWDWLARLYCNPENVQGTSDIKEISRIEKAVKVYEEGLE 360

Query: 361 CVPSSAIFSLYVEFLRSIIVPVKGEQTLGLSSHTDNITSRLLMVYEKALTLGHITDDLAC 420
           CVPSSAIFSLYVEFLRSIIVPVKGEQTLGLSSHTDNITSRLLMVYEKALTLGHITDDLAC
Sbjct: 361 CVPSSAIFSLYVEFLRSIIVPVKGEQTLGLSSHTDNITSRLLMVYEKALTLGHITDDLAC 420

Query: 421 QYVLFYLELGRLDEAQKLAERLCSGKFSNSVKLWVLRVSTEIKCVLKDSPSPSKDDLKSI 480
           QYVLFYLELGRLDEAQKLAERLCSGKFSNSVKLWVLRVSTEIKCVLKDSPSPSKDDLKSI
Sbjct: 421 QYVLFYLELGRLDEAQKLAERLCSGKFSNSVKLWVLRVSTEIKCVLKDSPSPSKDDLKSI 480

Query: 481 FELTKEVLKKFSVSESGSLWLKVLKFFANQSYYFDKLVEISLYALAKSGGNEDGFSLSSV 540
           FELTKEVLKKFSVSESGSLWLKVLKFFANQSYYFDKLVEISLYALAKSGGNEDGFSLSSV
Sbjct: 481 FELTKEVLKKFSVSESGSLWLKVLKFFANQSYYFDKLVEISLYALAKSGGNEDGFSLSSV 540

Query: 541 IVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLATAGDKDGLANARKLFES 600
           IVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLATAGDKDGLANARKLFES
Sbjct: 541 IVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLATAGDKDGLANARKLFES 600

Query: 601 ALATYGQNVRLWQEYYTLESKIGSSETAAAVRWRARKTLKDATALATSSDL 652
           ALATYGQNVRLWQEYYTLESKIGSSETAAAVRWRARKTLKDATALATSSDL
Sbjct: 601 ALATYGQNVRLWQEYYTLESKIGSSETAAAVRWRARKTLKDATALATSSDL 651

[Close]

BLAST of CSPI06G33440 vs. ExPASy TrEMBL
Match: A0A5D3CNA4 (U3 small nucleolar RNA-associated protein 6-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006370 PE=3 SV=1)

HSP 1 Score: 1211.8 bits (3134), Expect = 0.0e+00
Identity = 617/651 (94.78%), Postives = 635/651 (97.54%), Query Frame = 0


Query: 1   MADVVQFRLEGMVDELDDFEKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDY 60
           MADVVQFRLEGMVDELDD EKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDY
Sbjct: 1   MADVVQFRLEGMVDELDDLEKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDY 60

Query: 61  EIQLESLRRLRKKAVARELKKQGDKKMKKSISDFAGVKRILYIYRLAVTRYKGDIDLWFR 120
           EIQL+SLR LR+KAVARELKKQG+KKM+ SISDFAGVKRILYIYRLAV+RYKGDIDLWFR
Sbjct: 61  EIQLDSLRHLRRKAVARELKKQGNKKMRISISDFAGVKRILYIYRLAVSRYKGDIDLWFR 120

Query: 121 YLEFCRARKNGTMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCP 180
           YLEFCRARKNG MKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCP
Sbjct: 121 YLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCP 180

Query: 181 TSEDLWIEYLRMELTYLNKLKARKVALGEDEGSLVRENITAAEKQWREENKDLFMSMGET 240
           TSEDLWIEYLRMELTYLNKLKARKVALGEDEGSLVRENITA EKQWREENKDLFMSMGET
Sbjct: 181 TSEDLWIEYLRMELTYLNKLKARKVALGEDEGSLVRENITAVEKQWREENKDLFMSMGET 240

Query: 241 RGDNDESGVETLSKDKLDLFREKGSNLLETIYSGAIEALPSSFSLRKRVLEILEAMDLAH 300
           RGD+D S VET+SK+KLDLFREKGSN+LETIY+GAIEALPSSFSLRKRVLEILEAMDLAH
Sbjct: 241 RGDSDGSSVETVSKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH 300

Query: 301 SEEMQSKILQDIKRDFASQPQYWDWLARLYCNPENVQGTSDIKEISRIEKAVKVYEEGLE 360
           SEEMQSKILQDIKRDFASQPQYWDWLARL  NPENVQGTSDIKEISRIE+AVKVYEEGLE
Sbjct: 301 SEEMQSKILQDIKRDFASQPQYWDWLARLKYNPENVQGTSDIKEISRIEEAVKVYEEGLE 360

Query: 361 CVPSSAIFSLYVEFLRSIIVPVKGEQTLGLSSHTDNITSRLLMVYEKALTLGHITDDLAC 420
           C+PSSA+FSLYV+FLRSIIVPVKGEQTLGLSSHT+NITSRLLMVYEKALTLGHITDDLAC
Sbjct: 361 CMPSSALFSLYVKFLRSIIVPVKGEQTLGLSSHTENITSRLLMVYEKALTLGHITDDLAC 420

Query: 421 QYVLFYLELGRLDEAQKLAERLCSGKFSNSVKLWVLRVSTEIKCVLKDSPSPSKDDLKSI 480
           QYVLFYLELGRLDEAQ+LA+RLCSGKFSNSVKLW LRVSTEIKC  KDSPSPSK+DLKSI
Sbjct: 421 QYVLFYLELGRLDEAQELAQRLCSGKFSNSVKLWELRVSTEIKCSSKDSPSPSKNDLKSI 480

Query: 481 FELTKEVLKKFSVSESGSLWLKVLKFFANQSYYFDKLVEISLYALAKSGGNEDGFSLSSV 540
           FELTKEVLKKFSVSESGSLWLKVLKFFANQSYYFDKLVEISL ALAKSGGNEDGFSLSSV
Sbjct: 481 FELTKEVLKKFSVSESGSLWLKVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSV 540

Query: 541 IVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLATAGDKDGLANARKLFES 600
           IVDFVLQKDGIQ TREVYKKFLGLPHPGLAMYQTCIQLESNLATAGDKDGLANARKLFES
Sbjct: 541 IVDFVLQKDGIQHTREVYKKFLGLPHPGLAMYQTCIQLESNLATAGDKDGLANARKLFES 600

Query: 601 ALATYGQNVRLWQEYYTLESKIGSSETAAAVRWRARKTLKDATALATSSDL 652
           AL TYGQNV LWQEYYTLESKIGSSETAAAVRWRARKTLKDATALATSSDL
Sbjct: 601 ALTTYGQNVSLWQEYYTLESKIGSSETAAAVRWRARKTLKDATALATSSDL 651

[Close]

BLAST of CSPI06G33440 vs. ExPASy TrEMBL
Match: A0A1S3B0R2 (U3 small nucleolar RNA-associated protein 6 homolog OS=Cucumis melo OX=3656 GN=LOC103484621 PE=3 SV=1)

HSP 1 Score: 1211.8 bits (3134), Expect = 0.0e+00
Identity = 617/651 (94.78%), Postives = 635/651 (97.54%), Query Frame = 0


Query: 1   MADVVQFRLEGMVDELDDFEKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDY 60
           MADVVQFRLEGMVDELDD EKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDY
Sbjct: 1   MADVVQFRLEGMVDELDDLEKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDY 60

Query: 61  EIQLESLRRLRKKAVARELKKQGDKKMKKSISDFAGVKRILYIYRLAVTRYKGDIDLWFR 120
           EIQL+SLR LR+KAVARELKKQG+KKM+ SISDFAGVKRILYIYRLAV+RYKGDIDLWFR
Sbjct: 61  EIQLDSLRHLRRKAVARELKKQGNKKMRISISDFAGVKRILYIYRLAVSRYKGDIDLWFR 120

Query: 121 YLEFCRARKNGTMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCP 180
           YLEFCRARKNG MKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCP
Sbjct: 121 YLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCP 180

Query: 181 TSEDLWIEYLRMELTYLNKLKARKVALGEDEGSLVRENITAAEKQWREENKDLFMSMGET 240
           TSEDLWIEYLRMELTYLNKLKARKVALGEDEGSLVRENITA EKQWREENKDLFMSMGET
Sbjct: 181 TSEDLWIEYLRMELTYLNKLKARKVALGEDEGSLVRENITAVEKQWREENKDLFMSMGET 240

Query: 241 RGDNDESGVETLSKDKLDLFREKGSNLLETIYSGAIEALPSSFSLRKRVLEILEAMDLAH 300
           RGD+D S VET+SK+KLDLFREKGSN+LETIY+GAIEALPSSFSLRKRVLEILEAMDLAH
Sbjct: 241 RGDSDGSSVETVSKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH 300

Query: 301 SEEMQSKILQDIKRDFASQPQYWDWLARLYCNPENVQGTSDIKEISRIEKAVKVYEEGLE 360
           SEEMQSKILQDIKRDFASQPQYWDWLARL  NPENVQGTSDIKEISRIE+AVKVYEEGLE
Sbjct: 301 SEEMQSKILQDIKRDFASQPQYWDWLARLKYNPENVQGTSDIKEISRIEEAVKVYEEGLE 360

Query: 361 CVPSSAIFSLYVEFLRSIIVPVKGEQTLGLSSHTDNITSRLLMVYEKALTLGHITDDLAC 420
           C+PSSA+FSLYV+FLRSIIVPVKGEQTLGLSSHT+NITSRLLMVYEKALTLGHITDDLAC
Sbjct: 361 CMPSSALFSLYVKFLRSIIVPVKGEQTLGLSSHTENITSRLLMVYEKALTLGHITDDLAC 420

Query: 421 QYVLFYLELGRLDEAQKLAERLCSGKFSNSVKLWVLRVSTEIKCVLKDSPSPSKDDLKSI 480
           QYVLFYLELGRLDEAQ+LA+RLCSGKFSNSVKLW LRVSTEIKC  KDSPSPSK+DLKSI
Sbjct: 421 QYVLFYLELGRLDEAQELAQRLCSGKFSNSVKLWELRVSTEIKCSSKDSPSPSKNDLKSI 480

Query: 481 FELTKEVLKKFSVSESGSLWLKVLKFFANQSYYFDKLVEISLYALAKSGGNEDGFSLSSV 540
           FELTKEVLKKFSVSESGSLWLKVLKFFANQSYYFDKLVEISL ALAKSGGNEDGFSLSSV
Sbjct: 481 FELTKEVLKKFSVSESGSLWLKVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSV 540

Query: 541 IVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLATAGDKDGLANARKLFES 600
           IVDFVLQKDGIQ TREVYKKFLGLPHPGLAMYQTCIQLESNLATAGDKDGLANARKLFES
Sbjct: 541 IVDFVLQKDGIQHTREVYKKFLGLPHPGLAMYQTCIQLESNLATAGDKDGLANARKLFES 600

Query: 601 ALATYGQNVRLWQEYYTLESKIGSSETAAAVRWRARKTLKDATALATSSDL 652
           AL TYGQNV LWQEYYTLESKIGSSETAAAVRWRARKTLKDATALATSSDL
Sbjct: 601 ALTTYGQNVSLWQEYYTLESKIGSSETAAAVRWRARKTLKDATALATSSDL 651

[Close]

BLAST of CSPI06G33440 vs. ExPASy TrEMBL
Match: A0A6J1CMJ8 (U3 small nucleolar RNA-associated protein 6 homolog OS=Momordica charantia OX=3673 GN=LOC111012347 PE=3 SV=1)

HSP 1 Score: 1118.2 bits (2891), Expect = 0.0e+00
Identity = 564/651 (86.64%), Postives = 605/651 (92.93%), Query Frame = 0


Query: 1   MADVVQFRLEGMVDELDDFEKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDY 60
           MADVVQFRLEGMVDELDD E+RGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYL Y+DY
Sbjct: 1   MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYVDY 60

Query: 61  EIQLESLRRLRKKAVARELKKQGDKKMKKSISDFAGVKRILYIYRLAVTRYKGDIDLWFR 120
           E  L+SLR LRKKAVARELKKQG+KKM+KSISDFAGVKRILYIYRLAVTRYKGDIDLWFR
Sbjct: 61  ETHLDSLRNLRKKAVARELKKQGNKKMRKSISDFAGVKRILYIYRLAVTRYKGDIDLWFR 120

Query: 121 YLEFCRARKNGTMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCP 180
           YLEFCR ++NG MKKVLAQLIRFHPKVPGVWIYAAAWEFDHN NVDAARSLMLSGLRVCP
Sbjct: 121 YLEFCRGQQNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNTNVDAARSLMLSGLRVCP 180

Query: 181 TSEDLWIEYLRMELTYLNKLKARKVALGEDEGSLVRENITAAEKQWREENKDLFMSMGET 240
           TSEDLW+EYLRMELTYLNKLKARKVALGED+GSLVREN  A EKQWREENKDLFMS+GE 
Sbjct: 181 TSEDLWVEYLRMELTYLNKLKARKVALGEDKGSLVRENRAAEEKQWREENKDLFMSIGEE 240

Query: 241 RGDNDESGVETLSKDKLDLFREKGSNLLETIYSGAIEALPSSFSLRKRVLEILEAMDLAH 300
           R +ND S VET SKD+LDLFRE+GSN+LETIY+GAIEALPSSFSLRKRVLEILEAMDL+H
Sbjct: 241 RENNDGSVVETESKDQLDLFREQGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLSH 300

Query: 301 SEEMQSKILQDIKRDFASQPQYWDWLARLYCNPENVQGTSDIKEISRIEKAVKVYEEGLE 360
           SEEM SKILQD+KRDF +QPQYWDWLARL CNPENVQG SD KEIS+IEKAV+VYEE LE
Sbjct: 301 SEEMHSKILQDLKRDFGTQPQYWDWLARLECNPENVQGMSDGKEISQIEKAVQVYEEALE 360

Query: 361 CVPSSAIFSLYVEFLRSIIVPVKGEQTLGLSSHTDNITSRLLMVYEKALTLGHITDDLAC 420
           C+PSS +FSLYVEFL +II PVKG+ T GLSS+T NITSRLL+VYEKALTLGHIT+DL C
Sbjct: 361 CLPSSTMFSLYVEFLMNIITPVKGKHTSGLSSYTVNITSRLLVVYEKALTLGHITEDLGC 420

Query: 421 QYVLFYLELGRLDEAQKLAERLCSGKFSNSVKLWVLRVSTEIKCVLKDSPSPSKDDLKSI 480
           QYV FYL+LGRLDEA+KLAERLCSGK SNSVKLWVLRVS EIKC+LKDSPSPSKDD+KSI
Sbjct: 421 QYVSFYLQLGRLDEARKLAERLCSGKLSNSVKLWVLRVSNEIKCILKDSPSPSKDDMKSI 480

Query: 481 FELTKEVLKKFSVSESGSLWLKVLKFFANQSYYFDKLVEISLYALAKSGGNEDGFSLSSV 540
           FELTK+VL+ FSVSES SLWL VL FFANQSYYFDKL+EISL ALAK GG+EDGFSLSS 
Sbjct: 481 FELTKDVLRDFSVSESESLWLVVLNFFANQSYYFDKLLEISLLALAKYGGSEDGFSLSST 540

Query: 541 IVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLATAGDKDGLANARKLFES 600
           IVDFVLQKDGIQRTREVYKKFLGLPHPG AMY+TCIQLESNLA+AGDKDGLANARKLFES
Sbjct: 541 IVDFVLQKDGIQRTREVYKKFLGLPHPGRAMYRTCIQLESNLASAGDKDGLANARKLFES 600

Query: 601 ALATYGQNVRLWQEYYTLESKIGSSETAAAVRWRARKTLKDATALATSSDL 652
           AL TY Q+V LWQEY  +E+KIGSSETAAA+RWRARKTLKDATAL TSSDL
Sbjct: 601 ALTTYDQDVSLWQEYCIMEAKIGSSETAAAIRWRARKTLKDATALVTSSDL 651

[Close]

BLAST of CSPI06G33440 vs. ExPASy TrEMBL
Match: A0A6J1KQP1 (U3 small nucleolar RNA-associated protein 6 homolog OS=Cucurbita maxima OX=3661 GN=LOC111496770 PE=3 SV=1)

HSP 1 Score: 1107.0 bits (2862), Expect = 0.0e+00
Identity = 561/651 (86.18%), Postives = 609/651 (93.55%), Query Frame = 0


Query: 1   MADVVQFRLEGMVDELDDFEKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDY 60
           MADVVQFRLEGM+DELDD E+RGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDY+ YIDY
Sbjct: 1   MADVVQFRLEGMLDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYVAYIDY 60

Query: 61  EIQLESLRRLRKKAVARELKKQGDKKMKKSISDFAGVKRILYIYRLAVTRYKGDIDLWFR 120
           E  L+SLRRLRKKAV+RELKKQG+KKM+KS+SDFA VKRILYIYRLAV+RYKGDIDLWFR
Sbjct: 61  ETHLDSLRRLRKKAVSRELKKQGNKKMRKSVSDFACVKRILYIYRLAVSRYKGDIDLWFR 120

Query: 121 YLEFCRARKNGTMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCP 180
           YLEFCRA+KNG MKKVLAQLIRFHPKVPGVWIYAAAWEFDH+ NVDAARSLMLSGLRVCP
Sbjct: 121 YLEFCRAQKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHDTNVDAARSLMLSGLRVCP 180

Query: 181 TSEDLWIEYLRMELTYLNKLKARKVALGEDEGSLVRENITAAEKQWREENKDLFMSMGET 240
           TSEDLW+EYLRMELTYLNKLKARKVALGEDEGSLVREN  A +KQWREENKDLFMS+GE 
Sbjct: 181 TSEDLWVEYLRMELTYLNKLKARKVALGEDEGSLVRENKAAEDKQWREENKDLFMSIGED 240

Query: 241 RGDNDESGVETLSKDKLDLFREKGSNLLETIYSGAIEALPSSFSLRKRVLEILEAMDLAH 300
           R DND S  ET SK+KLDLFREKGSN+LETIY+GAIEALPSSFSLRKRVLEILEAMDLAH
Sbjct: 241 REDNDGSVGETESKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH 300

Query: 301 SEEMQSKILQDIKRDFASQPQYWDWLARLYCNPENVQGTSDIKEISRIEKAVKVYEEGLE 360
           SEE+ SKILQDIKRDF ++PQYWDWLARL  NP++VQG SD K+ SRIEKAV+VYEEGLE
Sbjct: 301 SEELHSKILQDIKRDFGTEPQYWDWLARLRYNPDDVQGMSDKKKNSRIEKAVQVYEEGLE 360

Query: 361 CVPSSAIFSLYVEFLRSIIVPVKGEQTLGLSSHTDNITSRLLMVYEKALTLGHITDDLAC 420
            VPSSA+FSLYVEFL ++I  VKGEQ+ GLSS T N TSRLLMVYEKALT GHITDDLAC
Sbjct: 361 HVPSSAMFSLYVEFLMNVITSVKGEQSSGLSSCTMNTTSRLLMVYEKALTSGHITDDLAC 420

Query: 421 QYVLFYLELGRLDEAQKLAERLCSGKFSNSVKLWVLRVSTEIKCVLKDSPSPSKDDLKSI 480
           QYV FY +LG+LDEA+KLA+RLCSGK SNSVKLWVLRVSTEIK +LKDSPSPSKDDLKSI
Sbjct: 421 QYVSFYFQLGKLDEARKLAKRLCSGKLSNSVKLWVLRVSTEIKSILKDSPSPSKDDLKSI 480

Query: 481 FELTKEVLKKFSVSESGSLWLKVLKFFANQSYYFDKLVEISLYALAKSGGNEDGFSLSSV 540
           FELTKEVL+ FSVSESGSLWL VLKFFANQS+YFD+LVEISL+ALAKSGG+EDGFSLSS 
Sbjct: 481 FELTKEVLRDFSVSESGSLWLTVLKFFANQSHYFDQLVEISLFALAKSGGSEDGFSLSSA 540

Query: 541 IVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLATAGDKDGLANARKLFES 600
           IVDF+LQKDGIQRTREVYKKFL LPHPGLA+Y+TCIQLESNLA+AGDK+GLA+ARKLFES
Sbjct: 541 IVDFILQKDGIQRTREVYKKFLRLPHPGLAIYRTCIQLESNLASAGDKNGLASARKLFES 600

Query: 601 ALATYGQNVRLWQEYYTLESKIGSSETAAAVRWRARKTLKDATALATSSDL 652
           ALATYGQ+V LWQEYY +ESK+GSSETAAA+RWRARKTLKDATALATSSDL
Sbjct: 601 ALATYGQDVSLWQEYYIMESKVGSSETAAAIRWRARKTLKDATALATSSDL 651

[Close]

BLAST of CSPI06G33440 vs. NCBI nr
Match: XP_004134769.1 (U3 small nucleolar RNA-associated protein 6 homolog [Cucumis sativus] >KGN49099.1 hypothetical protein Csa_003801 [Cucumis sativus])

HSP 1 Score: 1276.5 bits (3302), Expect = 0.0e+00
Identity = 651/651 (100.00%), Postives = 651/651 (100.00%), Query Frame = 0


Query: 1   MADVVQFRLEGMVDELDDFEKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDY 60
           MADVVQFRLEGMVDELDDFEKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDY
Sbjct: 1   MADVVQFRLEGMVDELDDFEKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDY 60

Query: 61  EIQLESLRRLRKKAVARELKKQGDKKMKKSISDFAGVKRILYIYRLAVTRYKGDIDLWFR 120
           EIQLESLRRLRKKAVARELKKQGDKKMKKSISDFAGVKRILYIYRLAVTRYKGDIDLWFR
Sbjct: 61  EIQLESLRRLRKKAVARELKKQGDKKMKKSISDFAGVKRILYIYRLAVTRYKGDIDLWFR 120

Query: 121 YLEFCRARKNGTMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCP 180
           YLEFCRARKNGTMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCP
Sbjct: 121 YLEFCRARKNGTMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCP 180

Query: 181 TSEDLWIEYLRMELTYLNKLKARKVALGEDEGSLVRENITAAEKQWREENKDLFMSMGET 240
           TSEDLWIEYLRMELTYLNKLKARKVALGEDEGSLVRENITAAEKQWREENKDLFMSMGET
Sbjct: 181 TSEDLWIEYLRMELTYLNKLKARKVALGEDEGSLVRENITAAEKQWREENKDLFMSMGET 240

Query: 241 RGDNDESGVETLSKDKLDLFREKGSNLLETIYSGAIEALPSSFSLRKRVLEILEAMDLAH 300
           RGDNDESGVETLSKDKLDLFREKGSNLLETIYSGAIEALPSSFSLRKRVLEILEAMDLAH
Sbjct: 241 RGDNDESGVETLSKDKLDLFREKGSNLLETIYSGAIEALPSSFSLRKRVLEILEAMDLAH 300

Query: 301 SEEMQSKILQDIKRDFASQPQYWDWLARLYCNPENVQGTSDIKEISRIEKAVKVYEEGLE 360
           SEEMQSKILQDIKRDFASQPQYWDWLARLYCNPENVQGTSDIKEISRIEKAVKVYEEGLE
Sbjct: 301 SEEMQSKILQDIKRDFASQPQYWDWLARLYCNPENVQGTSDIKEISRIEKAVKVYEEGLE 360

Query: 361 CVPSSAIFSLYVEFLRSIIVPVKGEQTLGLSSHTDNITSRLLMVYEKALTLGHITDDLAC 420
           CVPSSAIFSLYVEFLRSIIVPVKGEQTLGLSSHTDNITSRLLMVYEKALTLGHITDDLAC
Sbjct: 361 CVPSSAIFSLYVEFLRSIIVPVKGEQTLGLSSHTDNITSRLLMVYEKALTLGHITDDLAC 420

Query: 421 QYVLFYLELGRLDEAQKLAERLCSGKFSNSVKLWVLRVSTEIKCVLKDSPSPSKDDLKSI 480
           QYVLFYLELGRLDEAQKLAERLCSGKFSNSVKLWVLRVSTEIKCVLKDSPSPSKDDLKSI
Sbjct: 421 QYVLFYLELGRLDEAQKLAERLCSGKFSNSVKLWVLRVSTEIKCVLKDSPSPSKDDLKSI 480

Query: 481 FELTKEVLKKFSVSESGSLWLKVLKFFANQSYYFDKLVEISLYALAKSGGNEDGFSLSSV 540
           FELTKEVLKKFSVSESGSLWLKVLKFFANQSYYFDKLVEISLYALAKSGGNEDGFSLSSV
Sbjct: 481 FELTKEVLKKFSVSESGSLWLKVLKFFANQSYYFDKLVEISLYALAKSGGNEDGFSLSSV 540

Query: 541 IVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLATAGDKDGLANARKLFES 600
           IVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLATAGDKDGLANARKLFES
Sbjct: 541 IVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLATAGDKDGLANARKLFES 600

Query: 601 ALATYGQNVRLWQEYYTLESKIGSSETAAAVRWRARKTLKDATALATSSDL 652
           ALATYGQNVRLWQEYYTLESKIGSSETAAAVRWRARKTLKDATALATSSDL
Sbjct: 601 ALATYGQNVRLWQEYYTLESKIGSSETAAAVRWRARKTLKDATALATSSDL 651

[Close]

BLAST of CSPI06G33440 vs. NCBI nr
Match: XP_008440018.1 (PREDICTED: U3 small nucleolar RNA-associated protein 6 homolog [Cucumis melo] >TYK13035.1 U3 small nucleolar RNA-associated protein 6-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 1211.8 bits (3134), Expect = 0.0e+00
Identity = 617/651 (94.78%), Postives = 635/651 (97.54%), Query Frame = 0


Query: 1   MADVVQFRLEGMVDELDDFEKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDY 60
           MADVVQFRLEGMVDELDD EKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDY
Sbjct: 1   MADVVQFRLEGMVDELDDLEKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDY 60

Query: 61  EIQLESLRRLRKKAVARELKKQGDKKMKKSISDFAGVKRILYIYRLAVTRYKGDIDLWFR 120
           EIQL+SLR LR+KAVARELKKQG+KKM+ SISDFAGVKRILYIYRLAV+RYKGDIDLWFR
Sbjct: 61  EIQLDSLRHLRRKAVARELKKQGNKKMRISISDFAGVKRILYIYRLAVSRYKGDIDLWFR 120

Query: 121 YLEFCRARKNGTMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCP 180
           YLEFCRARKNG MKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCP
Sbjct: 121 YLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCP 180

Query: 181 TSEDLWIEYLRMELTYLNKLKARKVALGEDEGSLVRENITAAEKQWREENKDLFMSMGET 240
           TSEDLWIEYLRMELTYLNKLKARKVALGEDEGSLVRENITA EKQWREENKDLFMSMGET
Sbjct: 181 TSEDLWIEYLRMELTYLNKLKARKVALGEDEGSLVRENITAVEKQWREENKDLFMSMGET 240

Query: 241 RGDNDESGVETLSKDKLDLFREKGSNLLETIYSGAIEALPSSFSLRKRVLEILEAMDLAH 300
           RGD+D S VET+SK+KLDLFREKGSN+LETIY+GAIEALPSSFSLRKRVLEILEAMDLAH
Sbjct: 241 RGDSDGSSVETVSKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH 300

Query: 301 SEEMQSKILQDIKRDFASQPQYWDWLARLYCNPENVQGTSDIKEISRIEKAVKVYEEGLE 360
           SEEMQSKILQDIKRDFASQPQYWDWLARL  NPENVQGTSDIKEISRIE+AVKVYEEGLE
Sbjct: 301 SEEMQSKILQDIKRDFASQPQYWDWLARLKYNPENVQGTSDIKEISRIEEAVKVYEEGLE 360

Query: 361 CVPSSAIFSLYVEFLRSIIVPVKGEQTLGLSSHTDNITSRLLMVYEKALTLGHITDDLAC 420
           C+PSSA+FSLYV+FLRSIIVPVKGEQTLGLSSHT+NITSRLLMVYEKALTLGHITDDLAC
Sbjct: 361 CMPSSALFSLYVKFLRSIIVPVKGEQTLGLSSHTENITSRLLMVYEKALTLGHITDDLAC 420

Query: 421 QYVLFYLELGRLDEAQKLAERLCSGKFSNSVKLWVLRVSTEIKCVLKDSPSPSKDDLKSI 480
           QYVLFYLELGRLDEAQ+LA+RLCSGKFSNSVKLW LRVSTEIKC  KDSPSPSK+DLKSI
Sbjct: 421 QYVLFYLELGRLDEAQELAQRLCSGKFSNSVKLWELRVSTEIKCSSKDSPSPSKNDLKSI 480

Query: 481 FELTKEVLKKFSVSESGSLWLKVLKFFANQSYYFDKLVEISLYALAKSGGNEDGFSLSSV 540
           FELTKEVLKKFSVSESGSLWLKVLKFFANQSYYFDKLVEISL ALAKSGGNEDGFSLSSV
Sbjct: 481 FELTKEVLKKFSVSESGSLWLKVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSV 540

Query: 541 IVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLATAGDKDGLANARKLFES 600
           IVDFVLQKDGIQ TREVYKKFLGLPHPGLAMYQTCIQLESNLATAGDKDGLANARKLFES
Sbjct: 541 IVDFVLQKDGIQHTREVYKKFLGLPHPGLAMYQTCIQLESNLATAGDKDGLANARKLFES 600

Query: 601 ALATYGQNVRLWQEYYTLESKIGSSETAAAVRWRARKTLKDATALATSSDL 652
           AL TYGQNV LWQEYYTLESKIGSSETAAAVRWRARKTLKDATALATSSDL
Sbjct: 601 ALTTYGQNVSLWQEYYTLESKIGSSETAAAVRWRARKTLKDATALATSSDL 651

[Close]

BLAST of CSPI06G33440 vs. NCBI nr
Match: XP_038883020.1 (U3 small nucleolar RNA-associated protein 6 homolog [Benincasa hispida])

HSP 1 Score: 1158.7 bits (2996), Expect = 0.0e+00
Identity = 589/652 (90.34%), Postives = 615/652 (94.33%), Query Frame = 0


Query: 1   MADVVQFRLEGMVDELDDFEKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDY 60
           MADVVQFRLE MVDELDD E+RGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYL YIDY
Sbjct: 1   MADVVQFRLESMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDY 60

Query: 61  EIQLESLRRLRKKAVARELKKQGDKKMKKSISDFAGVKRILYIYRLAVTRYKGDIDLWFR 120
           EI LESLR LRKKAVARELKKQG+KKM+KSISDFAGVKRILYIYRLAVTRYKGDIDLWFR
Sbjct: 61  EIHLESLRHLRKKAVARELKKQGNKKMRKSISDFAGVKRILYIYRLAVTRYKGDIDLWFR 120

Query: 121 YLEFCRARKNGTMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCP 180
           YLEFCRARKNG MKKVLAQLIRFHPKVPGVWIYAAAWEFDHN NVDAARSLMLSGLRVCP
Sbjct: 121 YLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNTNVDAARSLMLSGLRVCP 180

Query: 181 TSEDLWIEYLRMELTYLNKLKARKVALGEDEGSLVRENITAAEKQWREENKDLFMSMGET 240
           TSEDLW+EYLRMELTYLNKLKARKVALGEDEGSLVREN+ A EKQWREE+KDLFM MGE 
Sbjct: 181 TSEDLWVEYLRMELTYLNKLKARKVALGEDEGSLVRENMAAEEKQWREEHKDLFMPMGEA 240

Query: 241 RGDNDESGVETLSKDKLDLFREKGSNLLETIYSGAIEALPSSFSLRKRVLEILEAMDLAH 300
           R DND S VET SK+KLDLFRE+GSN+LETIY+GAIEALPSSFSLRKRVLEILEAMDLAH
Sbjct: 241 REDNDGSVVETESKNKLDLFREQGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH 300

Query: 301 SEEMQSKILQDIKRDFASQPQYWDWLARLYCNPENVQGTSDIKEISRIEKAVKVYEEGLE 360
           SEEMQSKILQDIKRDF ++PQYWDWLARL  NPEN+QG S IKEISRIEKAV+VYEEGLE
Sbjct: 301 SEEMQSKILQDIKRDFGTEPQYWDWLARLQYNPENLQGMSAIKEISRIEKAVQVYEEGLE 360

Query: 361 CVPSSAIFSLYVEFLRSIIVPVKGEQTLGLSSHTDNITSRLLMVYEKALTLGHITDDLAC 420
           CVPSS IFSLYV+FL  +I PVKGE+T GLS+HT+NITSRLLMVYEKALTLGHITDDLAC
Sbjct: 361 CVPSSTIFSLYVKFLMGLITPVKGEETSGLSTHTENITSRLLMVYEKALTLGHITDDLAC 420

Query: 421 QYVLFYLELGRLDEAQKLAERLCSGKFSNSVKLWVLRVSTEIKCVLKDSPSPSKDDLKSI 480
           QYVLFYLELGRLDEA+KLAERLCSG+FSNSVKLWVLRVSTEIKC+ KDSPSPSKDDLK I
Sbjct: 421 QYVLFYLELGRLDEARKLAERLCSGEFSNSVKLWVLRVSTEIKCISKDSPSPSKDDLKYI 480

Query: 481 FELTKEVLKKFSVSESGSLWLKVLKFFANQSYYFDKLVEISLYALAKSGGNEDGFSLSSV 540
           FELTKEVLK FSVSESGSLWL VLKFFANQSYYFDKLVEISL ALAKSGGNEDGFSLSS 
Sbjct: 481 FELTKEVLKNFSVSESGSLWLTVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSA 540

Query: 541 IVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLATAGDKDGLANARKLFES 600
           IVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLA+ GDKDGLANARKLFES
Sbjct: 541 IVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLASIGDKDGLANARKLFES 600

Query: 601 ALATYG-QNVRLWQEYYTLESKIGSSETAAAVRWRARKTLKDATALATSSDL 652
           AL TYG  +V LWQEYYT+ESKIGSSETAAA+RWRARKTLKDATAL TSSDL
Sbjct: 601 ALTTYGHDDVSLWQEYYTMESKIGSSETAAAIRWRARKTLKDATALVTSSDL 652

[Close]

BLAST of CSPI06G33440 vs. NCBI nr
Match: XP_022142158.1 (U3 small nucleolar RNA-associated protein 6 homolog [Momordica charantia])

HSP 1 Score: 1118.2 bits (2891), Expect = 0.0e+00
Identity = 564/651 (86.64%), Postives = 605/651 (92.93%), Query Frame = 0


Query: 1   MADVVQFRLEGMVDELDDFEKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDY 60
           MADVVQFRLEGMVDELDD E+RGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYL Y+DY
Sbjct: 1   MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYVDY 60

Query: 61  EIQLESLRRLRKKAVARELKKQGDKKMKKSISDFAGVKRILYIYRLAVTRYKGDIDLWFR 120
           E  L+SLR LRKKAVARELKKQG+KKM+KSISDFAGVKRILYIYRLAVTRYKGDIDLWFR
Sbjct: 61  ETHLDSLRNLRKKAVARELKKQGNKKMRKSISDFAGVKRILYIYRLAVTRYKGDIDLWFR 120

Query: 121 YLEFCRARKNGTMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCP 180
           YLEFCR ++NG MKKVLAQLIRFHPKVPGVWIYAAAWEFDHN NVDAARSLMLSGLRVCP
Sbjct: 121 YLEFCRGQQNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNTNVDAARSLMLSGLRVCP 180

Query: 181 TSEDLWIEYLRMELTYLNKLKARKVALGEDEGSLVRENITAAEKQWREENKDLFMSMGET 240
           TSEDLW+EYLRMELTYLNKLKARKVALGED+GSLVREN  A EKQWREENKDLFMS+GE 
Sbjct: 181 TSEDLWVEYLRMELTYLNKLKARKVALGEDKGSLVRENRAAEEKQWREENKDLFMSIGEE 240

Query: 241 RGDNDESGVETLSKDKLDLFREKGSNLLETIYSGAIEALPSSFSLRKRVLEILEAMDLAH 300
           R +ND S VET SKD+LDLFRE+GSN+LETIY+GAIEALPSSFSLRKRVLEILEAMDL+H
Sbjct: 241 RENNDGSVVETESKDQLDLFREQGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLSH 300

Query: 301 SEEMQSKILQDIKRDFASQPQYWDWLARLYCNPENVQGTSDIKEISRIEKAVKVYEEGLE 360
           SEEM SKILQD+KRDF +QPQYWDWLARL CNPENVQG SD KEIS+IEKAV+VYEE LE
Sbjct: 301 SEEMHSKILQDLKRDFGTQPQYWDWLARLECNPENVQGMSDGKEISQIEKAVQVYEEALE 360

Query: 361 CVPSSAIFSLYVEFLRSIIVPVKGEQTLGLSSHTDNITSRLLMVYEKALTLGHITDDLAC 420
           C+PSS +FSLYVEFL +II PVKG+ T GLSS+T NITSRLL+VYEKALTLGHIT+DL C
Sbjct: 361 CLPSSTMFSLYVEFLMNIITPVKGKHTSGLSSYTVNITSRLLVVYEKALTLGHITEDLGC 420

Query: 421 QYVLFYLELGRLDEAQKLAERLCSGKFSNSVKLWVLRVSTEIKCVLKDSPSPSKDDLKSI 480
           QYV FYL+LGRLDEA+KLAERLCSGK SNSVKLWVLRVS EIKC+LKDSPSPSKDD+KSI
Sbjct: 421 QYVSFYLQLGRLDEARKLAERLCSGKLSNSVKLWVLRVSNEIKCILKDSPSPSKDDMKSI 480

Query: 481 FELTKEVLKKFSVSESGSLWLKVLKFFANQSYYFDKLVEISLYALAKSGGNEDGFSLSSV 540
           FELTK+VL+ FSVSES SLWL VL FFANQSYYFDKL+EISL ALAK GG+EDGFSLSS 
Sbjct: 481 FELTKDVLRDFSVSESESLWLVVLNFFANQSYYFDKLLEISLLALAKYGGSEDGFSLSST 540

Query: 541 IVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLATAGDKDGLANARKLFES 600
           IVDFVLQKDGIQRTREVYKKFLGLPHPG AMY+TCIQLESNLA+AGDKDGLANARKLFES
Sbjct: 541 IVDFVLQKDGIQRTREVYKKFLGLPHPGRAMYRTCIQLESNLASAGDKDGLANARKLFES 600

Query: 601 ALATYGQNVRLWQEYYTLESKIGSSETAAAVRWRARKTLKDATALATSSDL 652
           AL TY Q+V LWQEY  +E+KIGSSETAAA+RWRARKTLKDATAL TSSDL
Sbjct: 601 ALTTYDQDVSLWQEYCIMEAKIGSSETAAAIRWRARKTLKDATALVTSSDL 651

[Close]

BLAST of CSPI06G33440 vs. NCBI nr
Match: XP_023517938.1 (U3 small nucleolar RNA-associated protein 6 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1109.0 bits (2867), Expect = 0.0e+00
Identity = 564/651 (86.64%), Postives = 608/651 (93.39%), Query Frame = 0


Query: 1   MADVVQFRLEGMVDELDDFEKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDY 60
           MADVVQFRLEGM+DELDD E+RGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDY+ YIDY
Sbjct: 1   MADVVQFRLEGMLDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYVAYIDY 60

Query: 61  EIQLESLRRLRKKAVARELKKQGDKKMKKSISDFAGVKRILYIYRLAVTRYKGDIDLWFR 120
           E  L+SLRRLRKKAV+RELKKQG+KKM+KS SDFA VKRILYIYRLAV+RYKGDIDLWFR
Sbjct: 61  ETHLDSLRRLRKKAVSRELKKQGNKKMRKSASDFACVKRILYIYRLAVSRYKGDIDLWFR 120

Query: 121 YLEFCRARKNGTMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCP 180
           YLEFCRA+KNG MKKVLAQLIRFHPKVPGVWIYAAAWEFDH+ NVDAARSLMLSGLRVCP
Sbjct: 121 YLEFCRAQKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHDTNVDAARSLMLSGLRVCP 180

Query: 181 TSEDLWIEYLRMELTYLNKLKARKVALGEDEGSLVRENITAAEKQWREENKDLFMSMGET 240
           TSEDLW+EYLRMELTYLNKLKARKVALGEDEGSLVREN  A +KQWREENKDLFMS+GE 
Sbjct: 181 TSEDLWVEYLRMELTYLNKLKARKVALGEDEGSLVRENKAAEDKQWREENKDLFMSIGED 240

Query: 241 RGDNDESGVETLSKDKLDLFREKGSNLLETIYSGAIEALPSSFSLRKRVLEILEAMDLAH 300
           R DND S  ET SK+KLDLFRE+GSN+LETIY+GAIEALPSSFSLRKRVLEILEAMDLAH
Sbjct: 241 REDNDGSVGETESKNKLDLFREQGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH 300

Query: 301 SEEMQSKILQDIKRDFASQPQYWDWLARLYCNPENVQGTSDIKEISRIEKAVKVYEEGLE 360
           SEE+ SKILQDIKRDF ++PQYWDWLARL  NP++VQG SD KE SRIEKAV+VYEEGLE
Sbjct: 301 SEELHSKILQDIKRDFGTEPQYWDWLARLQYNPDDVQGMSDKKENSRIEKAVQVYEEGLE 360

Query: 361 CVPSSAIFSLYVEFLRSIIVPVKGEQTLGLSSHTDNITSRLLMVYEKALTLGHITDDLAC 420
            VPSSA+FSLYVEFL ++I  VKGEQ+ GLSS T N TSRLLMVYEKALTLGHITDDLAC
Sbjct: 361 HVPSSAMFSLYVEFLMNVITSVKGEQSSGLSSCTMNTTSRLLMVYEKALTLGHITDDLAC 420

Query: 421 QYVLFYLELGRLDEAQKLAERLCSGKFSNSVKLWVLRVSTEIKCVLKDSPSPSKDDLKSI 480
           QYV FYL+LG+LDEA KLAERLCSGK SNSVKLWVLRVSTEIK +LKDSPSPSKDDL SI
Sbjct: 421 QYVSFYLQLGKLDEACKLAERLCSGKLSNSVKLWVLRVSTEIKSILKDSPSPSKDDLTSI 480

Query: 481 FELTKEVLKKFSVSESGSLWLKVLKFFANQSYYFDKLVEISLYALAKSGGNEDGFSLSSV 540
           FELTKE+L+ FSVSESGSLWL VLKFFANQS+YFD+LVEISL ALAKSGG+EDGFSLSS 
Sbjct: 481 FELTKEILRDFSVSESGSLWLTVLKFFANQSHYFDQLVEISLLALAKSGGSEDGFSLSSA 540

Query: 541 IVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLATAGDKDGLANARKLFES 600
           IVDFVLQKDGIQRTREVYKKFLGLPHPGLA+Y+TCIQLESNLA+AGDK+GLA+ARKLFES
Sbjct: 541 IVDFVLQKDGIQRTREVYKKFLGLPHPGLAIYRTCIQLESNLASAGDKNGLASARKLFES 600

Query: 601 ALATYGQNVRLWQEYYTLESKIGSSETAAAVRWRARKTLKDATALATSSDL 652
           ALATYGQ+V LWQEYY +ESK+GSSETAAA+RWRARKTLKDATALATSSDL
Sbjct: 601 ALATYGQDVSLWQEYYIMESKVGSSETAAAIRWRARKTLKDATALATSSDL 651

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BLAST of CSPI06G33440 vs. TAIR 10
Match: AT4G28200.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: RNA processing; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-processing protein, HAT helix (InterPro:IPR003107), U3 small nucleolar RNA-associated protein 6 (InterPro:IPR013949); Has 492 Blast hits to 480 proteins in 206 species: Archae - 0; Bacteria - 2; Metazoa - 128; Fungi - 191; Plants - 60; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink). )

HSP 1 Score: 746.9 bits (1927), Expect = 1.4e-215
Identity = 379/651 (58.22%), Postives = 499/651 (76.65%), Query Frame = 0


Query: 1   MADVVQFRLEGMVDELDDFEKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDY 60
           MADVVQ+RLE MVDELDD E+R +F+R EIAEIVKQRRKFEYRLKRP PLK+D++ YIDY
Sbjct: 1   MADVVQYRLERMVDELDDLERREIFTRAEIAEIVKQRRKFEYRLKRPSPLKEDFIAYIDY 60

Query: 61  EIQLESLRRLRKKAVARELKKQGDKKMKKSISDFAGVKRILYIYRLAVTRYKGDIDLWFR 120
           E++L+ LR+LR+K+VAR  K    K+ KKS+SDFAGV RI+ IYRLA  RYKGDI+LWFR
Sbjct: 61  EVKLDELRQLRRKSVARVTK----KRKKKSVSDFAGVARIVEIYRLATMRYKGDINLWFR 120

Query: 121 YLEFCRARKNGTMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCP 180
           YLEFC+ +++G MKK LAQ IRFHPKV GVWIYAA+WEFD N+NV AAR+LML+GLRVC 
Sbjct: 121 YLEFCKQKRHGRMKKALAQAIRFHPKVAGVWIYAASWEFDRNLNVTAARALMLNGLRVCS 180

Query: 181 TSEDLWIEYLRMELTYLNKLKARKVALGEDEGSLVRENITAAEKQWREENKDLFMSMGET 240
            SEDLW+EYLRMELT+LNKLKARKVALGED+GSLVR+  T  ++QW++ENK+LFMS+ E 
Sbjct: 181 NSEDLWVEYLRMELTFLNKLKARKVALGEDKGSLVRDTKTVEDEQWKDENKELFMSLDEK 240

Query: 241 RG----DNDESGVETLSKD---KLDLFREKGSNLLETIYSGAIEALPSSFSLRKRVLEIL 300
            G    +NDE  +    +D   K+D  +EKGSN+L+TIYSGA+EA+PSSF LRKR LEIL
Sbjct: 241 EGNEKEENDEDSIVEDVEDVTEKVDFLKEKGSNVLQTIYSGAVEAIPSSFDLRKRFLEIL 300

Query: 301 EAMDLAHSEEMQSKILQDIKRDFASQPQYWDWLARLYCNP--ENVQGTSDIKEISRIEKA 360
           EA DLAHS+EM++ IL D+KRDF ++P+YW+WLAR   +    N  G        +++KA
Sbjct: 301 EATDLAHSDEMRNTILSDLKRDFCNEPEYWNWLARHEMSGCISNEAGLEFAN--PQMQKA 360

Query: 361 VKVYEEGLECVPSSAIFSLYVEFLRSIIVPVKGEQTLGLSSHTDNITSRLLMVYEKALTL 420
           ++V+EEGL+ V SS++F +Y+ FL   IV   G++   +SS ++ I S ++ VY+KA   
Sbjct: 361 IQVFEEGLQTVTSSSMFEIYINFLMEAIVQSNGDEN-EISSLSNPIISHIINVYQKADET 420

Query: 421 GHITDDLACQYVLFYLELGRLDEAQKLAERLCSGKFSNSVKLWVLRVSTEIKCVLKDSPS 480
           G +T++LA +YV  YL+L +  EAQKLAE+LCS KF+ S KLW+ RVS EI+  L ++ S
Sbjct: 421 GCLTEELADEYVSLYLKLEKTHEAQKLAEKLCSEKFAGSAKLWLSRVSIEIRS-LSENSS 480

Query: 481 PSKDDLKSIFELTKEVLKKFSVSESGSLWLKVLKFFANQSYYFDKLVEISLYALAKSGGN 540
           PSK D +++FEL    L+K  +SES SLWL    FFA+Q  Y DKLVE+S+ +  KS G+
Sbjct: 481 PSKADFQTVFELLSNALRKVPISESESLWLMAFNFFAHQRTYLDKLVEMSILSATKSHGS 540

Query: 541 EDGFSLSSVIVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLATAGDKDGL 600
           +  FSL+S +V FVL+  G    R++YK+FL LP P L +Y+ CI++E+NL + GDKDGL
Sbjct: 541 DHVFSLASTVVKFVLETKGAHSARKIYKRFLALPGPSLVLYKGCIEIETNLISVGDKDGL 600

Query: 601 ANARKLFESALATYGQNVRLWQEYYTLESKIGSSETAAAVRWRARKTLKDA 643
           +NARKL++SA+A+YGQ+V LW+ YY+LE+K+G+SETA  V WRARKTL ++
Sbjct: 601 SNARKLYDSAVASYGQDVELWKNYYSLETKLGTSETANGVYWRARKTLNES 643

The following BLAST results are available for this feature:

BLAST of CSPI06G33440 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VCY6	3.3e-44	24.17	U3 small nucleolar RNA-associated protein 6 homolog OS=Mus musculus OX=10090 GN=...	[more]
Q9NYH9	1.0e-42	24.58	U3 small nucleolar RNA-associated protein 6 homolog OS=Homo sapiens OX=9606 GN=U...	[more]
Q54WN5	2.6e-33	24.66	U3 small nucleolar RNA-associated protein 6 homolog OS=Dictyostelium discoideum ...	[more]
O60188	6.0e-30	37.56	U3 small nucleolar RNA-associated protein 6 OS=Schizosaccharomyces pombe (strain...	[more]
Q02354	1.8e-26	31.00	U3 small nucleolar RNA-associated protein 6 OS=Saccharomyces cerevisiae (strain ...	[more]

BLAST of CSPI06G33440 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KJV9	0.0e+00	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G513630 PE=3 SV=1	[more]
A0A5D3CNA4	0.0e+00	94.78	U3 small nucleolar RNA-associated protein 6-like protein OS=Cucumis melo var. ma...	[more]
A0A1S3B0R2	0.0e+00	94.78	U3 small nucleolar RNA-associated protein 6 homolog OS=Cucumis melo OX=3656 GN=L...	[more]
A0A6J1CMJ8	0.0e+00	86.64	U3 small nucleolar RNA-associated protein 6 homolog OS=Momordica charantia OX=36...	[more]
A0A6J1KQP1	0.0e+00	86.18	U3 small nucleolar RNA-associated protein 6 homolog OS=Cucurbita maxima OX=3661 ...	[more]

BLAST of CSPI06G33440 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004134769.1	0.0e+00	100.00	U3 small nucleolar RNA-associated protein 6 homolog [Cucumis sativus] >KGN49099....	[more]
XP_008440018.1	0.0e+00	94.78	PREDICTED: U3 small nucleolar RNA-associated protein 6 homolog [Cucumis melo] >T...	[more]
XP_038883020.1	0.0e+00	90.34	U3 small nucleolar RNA-associated protein 6 homolog [Benincasa hispida]	[more]
XP_022142158.1	0.0e+00	86.64	U3 small nucleolar RNA-associated protein 6 homolog [Momordica charantia]	[more]
XP_023517938.1	0.0e+00	86.64	U3 small nucleolar RNA-associated protein 6 homolog [Cucurbita pepo subsp. pepo]	[more]

BLAST of CSPI06G33440 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G28200.1	1.4e-215	58.22	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: RNA processing; LOCATED I...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003107	HAT (Half-A-TPR) repeat	SMART	SM00386	hat_new_1	coord: 346..377 e-value: 0.84 score: 18.7 coord: 163..195 e-value: 0.013 score: 24.6 coord: 589..621 e-value: 6.7E-4 score: 29.0 coord: 549..581 e-value: 33.0 score: 11.7 coord: 95..127 e-value: 170.0 score: 6.4 coord: 128..160 e-value: 29.0 score: 12.0
IPR013949	U3 small nucleolar RNA-associated protein 6	PFAM	PF08640	U3_assoc_6	coord: 9..99 e-value: 5.5E-26 score: 90.4
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 50..207 e-value: 1.3E-14 score: 56.0 coord: 249..513 e-value: 3.4E-9 score: 38.2
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 530..649 e-value: 4.2E-7 score: 32.0
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 27..205
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 530..642
None	No IPR available	PANTHER	PTHR23271	HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN 66	coord: 1..645
None	No IPR available	PANTHER	PTHR23271:SF1	U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 6 HOMOLOG	coord: 1..645

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G33440.1	CSPI06G33440.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0006396	RNA processing
cellular_component	GO:0034388	Pwp2p-containing subcomplex of 90S preribosome
cellular_component	GO:0032040	small-subunit processome
molecular_function	GO:0005515	protein binding
molecular_function	GO:0030515	snoRNA binding