CSPI06G29870 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI06G29870
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	UPF0029 domain-containing protein
Location	Chr6: 25811546 .. 25814455 (-)
RNA-Seq Expression	CSPI06G29870
Synteny	CSPI06G29870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACGAAACGACGTCGGAGATGGTAGTAAGGAAAAGGAAAGGAGATTGATTCGCCCTCGTCTTGTCCAAGGGAGAATCGGGGGTTTCATCAAATGCCTGTGGCAATTGCAAATGCAGCAGCGCCAAGCTTTCGTCACTTCAACAAACTTAAACTCAATACTCGATTGTCTTCCTCACTGGGCGCCGTTCATCGAGATAAGAAAGATATGGTCGCAACAGCCAGTAGCAGTACCCCAAATGCTGGCGCATACACCACCATTAAAGAGATTGTAAGATTCGAAAAAGAAATCAAGAAGAGCAAGTTCATCGCTATCGCTGGCCCTGTCTCCAGCGAGCAATCTGCCTTCTCGTTTCTCTCCCAGGTGCTTTATCTTTCCAAATCTTAATATTTATTCATTTCTGATTCTCATGGAGGAGTTTTCGGTTTCTATTCCTTTTTAGCCTCTCTGCTTTTCTGTTTGTTTGTTGAATCGTAGATGGTTCTGATTCAATTGGTTAAGCTGTAGATGATTTTGATTCATTTGGTTAAGCTATCTATGTTCTTGTGAAATTCGTAATTGCAAATTGTACTATGACATTGGCATCGCTCTTTTTAATTAAAATATAGTGAAGATTAATGAACTTTACCTCAAAATGCGTCCTTAAATCTTTTAGGATAAGATTGACACGTTGGTGTAGAGTCCACTAATTTGACAGGCATTGTTGCCCTGAAACTCAGGTGCGGGATCCGCGAGCTACTCACAATTGCTGGGCGTATCAGGTGCTTACTTTTTGTCTCTTGGTTGGACGTCGTTAGCTGTATTTATTAGTTGTTTAAGTTCTTGGAGAATATATATTATGGGGTAGTTCGCCATCCTTTACAGTGGTGTCCTAATATGTTCATCACGTGATTTGTTGAAAGTGTAATGTAACAGAATTTATGCTAAATGGTATGATAAAATAATATAATGATGAGGAAGATGCTGGAGTTAGTTTCTATTTTACATTTTTATACTATCTCATTAAATTTGACATATTGCTGCTGCGAATGTGAATAACTTCTTTCTAAGTCATACCCTTTTTTTCCCTAAATTTGACATAGAAAGTTAGACCCGTTTGGATTGATTCAAGAAAAAATGTTTTTCAAGAAATTCATTTTTATTTAAACTTTTTTTGATGAAAATTTTTAAAACTGTACTCCAAAAACTATTTTGAGTGTATGTCAAACACTCCAATTTTTTCTAAAATAACTTACTTTTTAAATTAAACACTTGAAAATGTATTCTAAACACACCCTTAATTTGATGGTCTTATTATTACTTCAAGAGTCAAAATGCATTGTTCCAGTTTTTGGTTAAGAGTATTCCCATGAAGAGATTTTGGGAGGGGCATAATACATTTACTTCTTATGCCTCATTTCAGGTTGGAGATCAATATAGGTCTAATGATGATGGCGAGCCATCTGGTACAGCTGGAAAACCAATTCATTCTGCTATTGTTTCTTCAGGTATTGACAGAGTCATGGTGGTTGTGATCAGGTATTCTTTTTGCAAATGATACGTACTTGGTTGAAATATATTTTTCAGGCTGTATGAATTTTCCTTGGGAAAAATACTAGCAATTTGGTGACTTGGAGTCGTCTTGTTAATGTTTCTGGTTGATATGAATACATATGCTTGCCTGTTATACCCAACGTCATCTGATATTTTTTCCCTCTACCAAAATTTAGGTACTTCGGAGGTATCAAACTTGGCACTGGGGGACTAGTCAGGGCTTATGGAGGAGTAGCTTCCGAATGCCTGAAGAGTGCCCAAACATGTGTTGTGAAATCTAAGGTATTTCTTCTTTACCTTAATATTTGTTTTCAATCTTTGCTGCTAGTATTACTCAGAAGTTCATTGAAGCAAATTAACTATTAAACCGTTTTCAATTGATTTAAATATGAAATGTTGTTTTTGATAAATTGGGTTCCATTTCTTTTAGGTTCCAATGGGTGTGGAGGTACCATTTGATCTTTTAGGGGTCTTGTACCACCAGGTAAATTTGCTAATGCAATTGAGAGTTCATGGGTTTGTACCTCGGGCTCCATTGTTTCTGCCTTTTCTTTTCCTTAATCTAAGTTTTCGTGACATTGTCAATATTGCTTTTACTTTTAGAGTGGTGATCGTTCGGCTCCAGCAATACATGGTTTTACAGTCTTCTTATGCACTGCATGCATTCTTTCAGACGCAATTTAAAAATGGAGTATTGTAAATCTGAAATCTCTGTTGCTGTTTGCAGTTGCAATCTTTTCAAGTTGAGGACATTAAGCAGGATTATGACAGTGGTAAAGATGGTATTACTATGGTGACATTCAAGGTTGATTTCGATTGTGTTGAGAAGTTGGAGGATGCTATCAAATCTAACTGTAGCCGTGAATTAGTCTTTTACAAGCGATAAGTTATACAGTTACTCTTTGTACATGAATGCAGAGAAGGGAGGTACACATCAATATAAAGATGAAATCAAATGCGCATACAATTAATGGTGGGTGGTATGAGGTAGGTGACTGATAGCTTTGTACAACTAGTTACATTGCAGAATAACTTAGAAGTCCTTTGTAAAATACATTTCCCATACTAATAAATATTGAATTTGTCCACTTTTTGCTTCATTTTTATGTTCCTTCATTAACCTATATGCAATGTTACTGGTGTAGTAAGGTAGAAGCATCGTATTTTTCAGAAGCAAGCAGCAGTAAGTTCTGATTTAATTGATGATAATAACCATCAAGAAACCTTCGTCAATTTGGACTTGTTTCATTTGATGGGAAGGAATAATTGAAATGTTGTTATGGTGGAAATCGTGTCGGGCTGCCTAAAGGTATATTAATTTTGCTTCTTTCAACCTTTATCTGGTTATAGTCC

mRNA sequence

AACGAAACGACGTCGGAGATGGTAGTAAGGAAAAGGAAAGGAGATTGATTCGCCCTCGTCTTGTCCAAGGGAGAATCGGGGGTTTCATCAAATGCCTGTGGCAATTGCAAATGCAGCAGCGCCAAGCTTTCGTCACTTCAACAAACTTAAACTCAATACTCGATTGTCTTCCTCACTGGGCGCCGTTCATCGAGATAAGAAAGATATGGTCGCAACAGCCAGTAGCAGTACCCCAAATGCTGGCGCATACACCACCATTAAAGAGATTGTAAGATTCGAAAAAGAAATCAAGAAGAGCAAGTTCATCGCTATCGCTGGCCCTGTCTCCAGCGAGCAATCTGCCTTCTCGTTTCTCTCCCAGGTGCGGGATCCGCGAGCTACTCACAATTGCTGGGCGTATCAGGTTGGAGATCAATATAGGTCTAATGATGATGGCGAGCCATCTGGTACAGCTGGAAAACCAATTCATTCTGCTATTGTTTCTTCAGGTATTGACAGAGTCATGGTGGTTGTGATCAGGTACTTCGGAGGTATCAAACTTGGCACTGGGGGACTAGTCAGGGCTTATGGAGGAGTAGCTTCCGAATGCCTGAAGAGTGCCCAAACATGTGTTGTGAAATCTAAGGTTCCAATGGGTGTGGAGGTACCATTTGATCTTTTAGGGGTCTTGTACCACCAGTTGCAATCTTTTCAAGTTGAGGACATTAAGCAGGATTATGACAGTGGTAAAGATGGTATTACTATGGTGACATTCAAGGTTGATTTCGATTGTGTTGAGAAGTTGGAGGATGCTATCAAATCTAACTGTAGCCGTGAATTAGTCTTTTACAAGCGATAAGTTATACAGTTACTCTTTGTACATGAATGCAGAGAAGGGAGGTACACATCAATATAAAGATGAAATCAAATGCGCATACAATTAATGGTGGGTGGTATGAGTAAGGTAGAAGCATCGTATTTTTCAGAAGCAAGCAGCAGTAAGTTCTGATTTAATTGATGATAATAACCATCAAGAAACCTTCGTCAATTTGGACTTGTTTCATTTGATGGGAAGGAATAATTGAAATGTTGTTATGGTGGAAATCGTGTCGGGCTGCCTAAAGGTATATTAATTTTGCTTCTTTCAACCTTTATCTGGTTATAGTCC

Coding sequence (CDS)

ATGCCTGTGGCAATTGCAAATGCAGCAGCGCCAAGCTTTCGTCACTTCAACAAACTTAAACTCAATACTCGATTGTCTTCCTCACTGGGCGCCGTTCATCGAGATAAGAAAGATATGGTCGCAACAGCCAGTAGCAGTACCCCAAATGCTGGCGCATACACCACCATTAAAGAGATTGTAAGATTCGAAAAAGAAATCAAGAAGAGCAAGTTCATCGCTATCGCTGGCCCTGTCTCCAGCGAGCAATCTGCCTTCTCGTTTCTCTCCCAGGTGCGGGATCCGCGAGCTACTCACAATTGCTGGGCGTATCAGGTTGGAGATCAATATAGGTCTAATGATGATGGCGAGCCATCTGGTACAGCTGGAAAACCAATTCATTCTGCTATTGTTTCTTCAGGTATTGACAGAGTCATGGTGGTTGTGATCAGGTACTTCGGAGGTATCAAACTTGGCACTGGGGGACTAGTCAGGGCTTATGGAGGAGTAGCTTCCGAATGCCTGAAGAGTGCCCAAACATGTGTTGTGAAATCTAAGGTTCCAATGGGTGTGGAGGTACCATTTGATCTTTTAGGGGTCTTGTACCACCAGTTGCAATCTTTTCAAGTTGAGGACATTAAGCAGGATTATGACAGTGGTAAAGATGGTATTACTATGGTGACATTCAAGGTTGATTTCGATTGTGTTGAGAAGTTGGAGGATGCTATCAAATCTAACTGTAGCCGTGAATTAGTCTTTTACAAGCGATAA

Protein sequence

MPVAIANAAAPSFRHFNKLKLNTRLSSSLGAVHRDKKDMVATASSSTPNAGAYTTIKEIVRFEKEIKKSKFIAIAGPVSSEQSAFSFLSQVRDPRATHNCWAYQVGDQYRSNDDGEPSGTAGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLGVLYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCSRELVFYKR*

Homology

[Close]

BLAST of CSPI06G29870 vs. ExPASy Swiss-Prot
Match: P32438 (IMPACT family member in pol 5'region (Fragment) OS=Thermus thermophilus OX=274 PE=3 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 2.3e-30
Identity = 67/138 (48.55%), Postives = 99/138 (71.74%), Query Frame = 0


Query: 66  IKKSKFIAIAGPVSSEQSAFSFLSQVRDPRATHNCWAYQVGDQYRSNDDGEPSGTAGKPI 125
           I++S+F+A A P +SE+ A +FL+  R+P+ATHN +AY++G  YR +DDGEP    G+PI
Sbjct: 2   IQRSRFLAKAAPAASEEEALAFLAAHREPQATHNAYAYRIGPLYRFSDDGEPR-APGRPI 61

Query: 126 HSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEV 185
             AI ++G+DRV+V+V+RYFGG+KLG GGLVRAYGGVA+E L+ A    +   V +   V
Sbjct: 62  LHAIEAAGLDRVVVLVVRYFGGVKLGAGGLVRAYGGVAAEALRRAPKAPLLDWVEVAFRV 121

Query: 186 PFDLLGVLYHQLQSFQVE 204
           PF  +G ++  L++  +E
Sbjct: 122 PFPEVGRVHGLLRARHLE 138

[Close]

BLAST of CSPI06G29870 vs. ExPASy Swiss-Prot
Match: P44842 (IMPACT family member HI_0722 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=HI_0722 PE=3 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.0e-22
Identity = 61/166 (36.75%), Postives = 93/166 (56.02%), Query Frame = 0


Query: 53  YTTIKEIVRFEKEIKKSKFIAIAGPVSSEQSAFSFLSQVRD--PRATHNCWAYQVGD--- 112
           Y   K  V FE+EIKKS+FI         + A +F ++++   P A H+CWA   G    
Sbjct: 4   YLVPKSAVVFEEEIKKSRFITYLQHTEGLEDARAFWAKIKQEHPNARHHCWAAVAGKPTD 63

Query: 113 --QYRSNDDGEPSGTAGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASE 172
             Q   +DDGEP+GTAGKP+ SA+  S +  +  VV+RY+GGI LGTGGLVRAYG    +
Sbjct: 64  SLQLGFSDDGEPAGTAGKPMLSALQGSQLGEISAVVVRYYGGILLGTGGLVRAYGNGVQQ 123

Query: 173 CLKSAQTCVVKSKVPMGVEVPFDLLGVLYHQLQSFQVEDIKQDYDS 212
            LK  ++ +   +    ++  +  L ++    + +QVE + Q + +
Sbjct: 124 ALKLIESEIKVERTLFKLDCDYGQLRLVQQLCEKYQVEILSQGFQA 169

[Close]

BLAST of CSPI06G29870 vs. ExPASy Swiss-Prot
Match: P32437 (IMPACT family member YvyE OS=Bacillus subtilis (strain 168) OX=224308 GN=yvyE PE=3 SV=2)

HSP 1 Score: 104.0 bits (258), Expect = 2.5e-21
Identity = 63/155 (40.65%), Postives = 85/155 (54.84%), Query Frame = 0


Query: 52  AYTTIKEIVRFEKEIKKSKFIAIAGPVSSEQSAFSFLSQVRDP--RATHNCWAYQVGDQ- 111
           +Y T+KE    E  I+KS+FI     VS+EQ A  F+ +++     ATHNC AY +G+  
Sbjct: 4   SYFTVKEAGEHEIVIEKSRFICHLSRVSTEQEAQEFIQKIKKQHWNATHNCSAYVIGEND 63

Query: 112 --YRSNDDGEPSGTAGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASEC 171
              ++NDDGEPSGTAG P+   +    +     VV RYFGGIKLG GGL+RAYG   SE 
Sbjct: 64  HIQKANDDGEPSGTAGVPMLEVLKKRRLKDTCAVVTRYFGGIKLGAGGLIRAYGKSVSEG 123

Query: 172 LKSAQTCVVKSKVPMGVEVPFDLLGVLYHQLQSFQ 202
           L        K    M     +  LG + ++L+  Q
Sbjct: 124 LNHIGVVERKLMRIMHTSADYTWLGKIENELRESQ 158

[Close]

BLAST of CSPI06G29870 vs. ExPASy Swiss-Prot
Match: P27862 (IMPACT family member YigZ OS=Escherichia coli (strain K12) OX=83333 GN=yigZ PE=1 SV=2)

HSP 1 Score: 98.2 bits (243), Expect = 1.4e-19
Identity = 58/145 (40.00%), Postives = 84/145 (57.93%), Query Frame = 0


Query: 64  KEIKKSKFIAIAGPVSSEQSAFSFLSQVR--DPRATHNCWAYQVG-----DQYRSNDDGE 123
           +EIKKS+FI +       ++A +F+  VR   P A H+C A+  G      Q   +DDGE
Sbjct: 15  EEIKKSRFITMLAHTDGVEAAKAFVESVRAEHPDARHHCVAWVAGAPDDSQQLGFSDDGE 74

Query: 124 PSGTAGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVK 183
           P+GTAGKP+ + ++ SG+  +  VV+RY+GGI LGTGGLV+AYGG  ++ L+   T   +
Sbjct: 75  PAGTAGKPMLAQLMGSGVGEITAVVVRYYGGILLGTGGLVKAYGGGVNQALRQLTT---Q 134

Query: 184 SKVPMGVEVPFDLLGVLYHQLQSFQ 202
            K P+        L   YHQL   +
Sbjct: 135 RKTPLTEYT----LQCEYHQLTGIE 152

[Close]

BLAST of CSPI06G29870 vs. ExPASy TrEMBL
Match: A0A0A0KGN8 (UPF0029 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G499080 PE=3 SV=1)

HSP 1 Score: 490.0 bits (1260), Expect = 6.0e-135
Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 0


Query: 1   MPVAIANAAAPSFRHFNKLKLNTRLSSSLGAVHRDKKDMVATASSSTPNAGAYTTIKEIV 60
           MPVAIANAAAPSFRHFNKLKLNTRLSSSLGAVHRDKKDMVATASSSTPNAGAYTTIKEIV
Sbjct: 1   MPVAIANAAAPSFRHFNKLKLNTRLSSSLGAVHRDKKDMVATASSSTPNAGAYTTIKEIV 60

Query: 61  RFEKEIKKSKFIAIAGPVSSEQSAFSFLSQVRDPRATHNCWAYQVGDQYRSNDDGEPSGT 120
           RFEKEIKKSKFIAIAGPVSSEQSAFSFLSQVRDPRATHNCWAYQVGDQYRSNDDGEPSGT
Sbjct: 61  RFEKEIKKSKFIAIAGPVSSEQSAFSFLSQVRDPRATHNCWAYQVGDQYRSNDDGEPSGT 120

Query: 121 AGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVP 180
           AGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVP
Sbjct: 121 AGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVP 180

Query: 181 MGVEVPFDLLGVLYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCS 240
           MGVEVPFDLLGVLYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCS
Sbjct: 181 MGVEVPFDLLGVLYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCS 240

Query: 241 RELVFYKR 249
           RELVFYKR
Sbjct: 241 RELVFYKR 248

[Close]

BLAST of CSPI06G29870 vs. ExPASy TrEMBL
Match: A0A5D3CN06 (IMPACT family member in pol 5'region isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G003200 PE=3 SV=1)

HSP 1 Score: 471.9 bits (1213), Expect = 1.7e-129
Identity = 239/248 (96.37%), Postives = 244/248 (98.39%), Query Frame = 0


Query: 1   MPVAIANAAAPSFRHFNKLKLNTRLSSSLGAVHRDKKDMVATASSSTPNAGAYTTIKEIV 60
           MPVAIA AAAPSFRHF KLKLNTRLSSSLGA+HR++K MVATASSS+ NAGAYTTIKEIV
Sbjct: 1   MPVAIAIAAAPSFRHFKKLKLNTRLSSSLGAIHRERKAMVATASSSSRNAGAYTTIKEIV 60

Query: 61  RFEKEIKKSKFIAIAGPVSSEQSAFSFLSQVRDPRATHNCWAYQVGDQYRSNDDGEPSGT 120
           RFEKEIKKSKFIAIAGPVS+EQSAFSFLSQVRDPRATHNCWAYQVGDQYRSNDDGEPSGT
Sbjct: 61  RFEKEIKKSKFIAIAGPVSNEQSAFSFLSQVRDPRATHNCWAYQVGDQYRSNDDGEPSGT 120

Query: 121 AGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVP 180
           AGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVP
Sbjct: 121 AGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVP 180

Query: 181 MGVEVPFDLLGVLYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCS 240
           MGVEVPFDLLGVLYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCS
Sbjct: 181 MGVEVPFDLLGVLYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCS 240

Query: 241 RELVFYKR 249
           RELVFYKR
Sbjct: 241 RELVFYKR 248

[Close]

BLAST of CSPI06G29870 vs. ExPASy TrEMBL
Match: A0A1S3B202 (IMPACT family member in pol 5'region isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484936 PE=3 SV=1)

HSP 1 Score: 471.9 bits (1213), Expect = 1.7e-129
Identity = 239/248 (96.37%), Postives = 244/248 (98.39%), Query Frame = 0


Query: 1   MPVAIANAAAPSFRHFNKLKLNTRLSSSLGAVHRDKKDMVATASSSTPNAGAYTTIKEIV 60
           MPVAIA AAAPSFRHF KLKLNTRLSSSLGA+HR++K MVATASSS+ NAGAYTTIKEIV
Sbjct: 1   MPVAIAIAAAPSFRHFKKLKLNTRLSSSLGAIHRERKAMVATASSSSRNAGAYTTIKEIV 60

Query: 61  RFEKEIKKSKFIAIAGPVSSEQSAFSFLSQVRDPRATHNCWAYQVGDQYRSNDDGEPSGT 120
           RFEKEIKKSKFIAIAGPVS+EQSAFSFLSQVRDPRATHNCWAYQVGDQYRSNDDGEPSGT
Sbjct: 61  RFEKEIKKSKFIAIAGPVSNEQSAFSFLSQVRDPRATHNCWAYQVGDQYRSNDDGEPSGT 120

Query: 121 AGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVP 180
           AGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVP
Sbjct: 121 AGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVP 180

Query: 181 MGVEVPFDLLGVLYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCS 240
           MGVEVPFDLLGVLYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCS
Sbjct: 181 MGVEVPFDLLGVLYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCS 240

Query: 241 RELVFYKR 249
           RELVFYKR
Sbjct: 241 RELVFYKR 248

[Close]

BLAST of CSPI06G29870 vs. ExPASy TrEMBL
Match: A0A6J1BU50 (uncharacterized protein LOC111005799 OS=Momordica charantia OX=3673 GN=LOC111005799 PE=3 SV=1)

HSP 1 Score: 441.4 bits (1134), Expect = 2.5e-120
Identity = 226/248 (91.13%), Postives = 233/248 (93.95%), Query Frame = 0


Query: 1   MPVAIANAAAPSFRHFNKLKLNTRLSSSLGAVHRDKKDMVATASSSTPNAGAYTTIKEIV 60
           MP AIA AAAP+ R+F  LKLN+RLSSSL A  R+ KDMV  ASSS+ NAGAYT IKEIV
Sbjct: 1   MPAAIAIAAAPNCRYFKNLKLNSRLSSSLCAFARENKDMVTAASSSSGNAGAYTIIKEIV 60

Query: 61  RFEKEIKKSKFIAIAGPVSSEQSAFSFLSQVRDPRATHNCWAYQVGDQYRSNDDGEPSGT 120
           RFEKEIKKSKFIAIAGPVS+EQSAFSFLSQVRDPRATHNCWAYQVGDQYRSNDDGEPSGT
Sbjct: 61  RFEKEIKKSKFIAIAGPVSNEQSAFSFLSQVRDPRATHNCWAYQVGDQYRSNDDGEPSGT 120

Query: 121 AGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVP 180
           AGKPIHSAI SSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVP
Sbjct: 121 AGKPIHSAIASSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVP 180

Query: 181 MGVEVPFDLLGVLYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCS 240
           MGVEVPFDLLGVLYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFD VEKLEDAIKSNCS
Sbjct: 181 MGVEVPFDLLGVLYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDRVEKLEDAIKSNCS 240

Query: 241 RELVFYKR 249
           REL+FYKR
Sbjct: 241 RELIFYKR 248

[Close]

BLAST of CSPI06G29870 vs. ExPASy TrEMBL
Match: A0A6J1GFX5 (uncharacterized protein LOC111453822 OS=Cucurbita moschata OX=3662 GN=LOC111453822 PE=3 SV=1)

HSP 1 Score: 438.3 bits (1126), Expect = 2.1e-119
Identity = 221/248 (89.11%), Postives = 235/248 (94.76%), Query Frame = 0


Query: 1   MPVAIANAAAPSFRHFNKLKLNTRLSSSLGAVHRDKKDMVATASSSTPNAGAYTTIKEIV 60
           MPVAIA+AAAP+FR+F  L LNTR SSSL A+ RDKKDMV T SSS+ NAGAYTTIKEIV
Sbjct: 1   MPVAIASAAAPNFRYFKTLNLNTRFSSSLCAIARDKKDMVTTVSSSSGNAGAYTTIKEIV 60

Query: 61  RFEKEIKKSKFIAIAGPVSSEQSAFSFLSQVRDPRATHNCWAYQVGDQYRSNDDGEPSGT 120
           RFEKEIKKSKFIAIAGPV++EQ+AFSFLSQVR+PRATHNCWAYQVGDQ+RSNDDGEPSGT
Sbjct: 61  RFEKEIKKSKFIAIAGPVTNEQTAFSFLSQVREPRATHNCWAYQVGDQFRSNDDGEPSGT 120

Query: 121 AGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVP 180
           AGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVP
Sbjct: 121 AGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVP 180

Query: 181 MGVEVPFDLLGVLYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCS 240
           MGVEVPF+LLG LYHQLQSF VEDIKQDYD GKDGITMVTFKVDFD VEKLEDAIKS+CS
Sbjct: 181 MGVEVPFNLLGALYHQLQSFHVEDIKQDYDCGKDGITMVTFKVDFDHVEKLEDAIKSHCS 240

Query: 241 RELVFYKR 249
           REL+FYK+
Sbjct: 241 RELIFYKQ 248

[Close]

BLAST of CSPI06G29870 vs. NCBI nr
Match: XP_004143447.1 (uncharacterized protein LOC101204297 isoform X1 [Cucumis sativus] >KGN48713.1 hypothetical protein Csa_003790 [Cucumis sativus])

HSP 1 Score: 490.0 bits (1260), Expect = 1.2e-134
Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 0


Query: 1   MPVAIANAAAPSFRHFNKLKLNTRLSSSLGAVHRDKKDMVATASSSTPNAGAYTTIKEIV 60
           MPVAIANAAAPSFRHFNKLKLNTRLSSSLGAVHRDKKDMVATASSSTPNAGAYTTIKEIV
Sbjct: 1   MPVAIANAAAPSFRHFNKLKLNTRLSSSLGAVHRDKKDMVATASSSTPNAGAYTTIKEIV 60

Query: 61  RFEKEIKKSKFIAIAGPVSSEQSAFSFLSQVRDPRATHNCWAYQVGDQYRSNDDGEPSGT 120
           RFEKEIKKSKFIAIAGPVSSEQSAFSFLSQVRDPRATHNCWAYQVGDQYRSNDDGEPSGT
Sbjct: 61  RFEKEIKKSKFIAIAGPVSSEQSAFSFLSQVRDPRATHNCWAYQVGDQYRSNDDGEPSGT 120

Query: 121 AGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVP 180
           AGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVP
Sbjct: 121 AGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVP 180

Query: 181 MGVEVPFDLLGVLYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCS 240
           MGVEVPFDLLGVLYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCS
Sbjct: 181 MGVEVPFDLLGVLYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCS 240

Query: 241 RELVFYKR 249
           RELVFYKR
Sbjct: 241 RELVFYKR 248

[Close]

BLAST of CSPI06G29870 vs. NCBI nr
Match: XP_008440556.1 (PREDICTED: IMPACT family member in pol 5'region isoform X1 [Cucumis melo] >KAA0036338.1 IMPACT family member in pol 5'region isoform X1 [Cucumis melo var. makuwa] >TYK12732.1 IMPACT family member in pol 5'region isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 471.9 bits (1213), Expect = 3.5e-129
Identity = 239/248 (96.37%), Postives = 244/248 (98.39%), Query Frame = 0


Query: 1   MPVAIANAAAPSFRHFNKLKLNTRLSSSLGAVHRDKKDMVATASSSTPNAGAYTTIKEIV 60
           MPVAIA AAAPSFRHF KLKLNTRLSSSLGA+HR++K MVATASSS+ NAGAYTTIKEIV
Sbjct: 1   MPVAIAIAAAPSFRHFKKLKLNTRLSSSLGAIHRERKAMVATASSSSRNAGAYTTIKEIV 60

Query: 61  RFEKEIKKSKFIAIAGPVSSEQSAFSFLSQVRDPRATHNCWAYQVGDQYRSNDDGEPSGT 120
           RFEKEIKKSKFIAIAGPVS+EQSAFSFLSQVRDPRATHNCWAYQVGDQYRSNDDGEPSGT
Sbjct: 61  RFEKEIKKSKFIAIAGPVSNEQSAFSFLSQVRDPRATHNCWAYQVGDQYRSNDDGEPSGT 120

Query: 121 AGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVP 180
           AGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVP
Sbjct: 121 AGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVP 180

Query: 181 MGVEVPFDLLGVLYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCS 240
           MGVEVPFDLLGVLYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCS
Sbjct: 181 MGVEVPFDLLGVLYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCS 240

Query: 241 RELVFYKR 249
           RELVFYKR
Sbjct: 241 RELVFYKR 248

[Close]

BLAST of CSPI06G29870 vs. NCBI nr
Match: XP_038881266.1 (IMPACT family member in pol 5'region [Benincasa hispida])

HSP 1 Score: 452.6 bits (1163), Expect = 2.2e-123
Identity = 233/257 (90.66%), Postives = 242/257 (94.16%), Query Frame = 0


Query: 1   MPVAIANAAAPSFRHFNKL---------KLNTRLSSSLGAVHRDKKDMVATASSSTPNAG 60
           MPVAIA AAAP+ RHF KL         K NTRLSSSLGAV R+KKDMVATASSS+ ++G
Sbjct: 1   MPVAIAIAAAPNLRHFKKLGAIINTREKKFNTRLSSSLGAVPREKKDMVATASSSSGDSG 60

Query: 61  AYTTIKEIVRFEKEIKKSKFIAIAGPVSSEQSAFSFLSQVRDPRATHNCWAYQVGDQYRS 120
           AYTTIKEIVRFE+EIKKSKFIAIAGPVS+EQSAFSFLSQVRDPRATHNCWAYQVGDQYRS
Sbjct: 61  AYTTIKEIVRFEREIKKSKFIAIAGPVSNEQSAFSFLSQVRDPRATHNCWAYQVGDQYRS 120

Query: 121 NDDGEPSGTAGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQ 180
           NDDGEPSGTAGKPIHSAIVSSGIDRVMVVVIR+FGGIKLGTGGLVRAYGGVASECLKSAQ
Sbjct: 121 NDDGEPSGTAGKPIHSAIVSSGIDRVMVVVIRHFGGIKLGTGGLVRAYGGVASECLKSAQ 180

Query: 181 TCVVKSKVPMGVEVPFDLLGVLYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKL 240
           TCVVKSKVPMGVEVPFDLLGVLYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKL
Sbjct: 181 TCVVKSKVPMGVEVPFDLLGVLYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKL 240

Query: 241 EDAIKSNCSRELVFYKR 249
           EDAIKSNCSR+LVFYKR
Sbjct: 241 EDAIKSNCSRDLVFYKR 257

[Close]

BLAST of CSPI06G29870 vs. NCBI nr
Match: XP_022133126.1 (uncharacterized protein LOC111005799 [Momordica charantia])

HSP 1 Score: 441.4 bits (1134), Expect = 5.1e-120
Identity = 226/248 (91.13%), Postives = 233/248 (93.95%), Query Frame = 0


Query: 1   MPVAIANAAAPSFRHFNKLKLNTRLSSSLGAVHRDKKDMVATASSSTPNAGAYTTIKEIV 60
           MP AIA AAAP+ R+F  LKLN+RLSSSL A  R+ KDMV  ASSS+ NAGAYT IKEIV
Sbjct: 1   MPAAIAIAAAPNCRYFKNLKLNSRLSSSLCAFARENKDMVTAASSSSGNAGAYTIIKEIV 60

Query: 61  RFEKEIKKSKFIAIAGPVSSEQSAFSFLSQVRDPRATHNCWAYQVGDQYRSNDDGEPSGT 120
           RFEKEIKKSKFIAIAGPVS+EQSAFSFLSQVRDPRATHNCWAYQVGDQYRSNDDGEPSGT
Sbjct: 61  RFEKEIKKSKFIAIAGPVSNEQSAFSFLSQVRDPRATHNCWAYQVGDQYRSNDDGEPSGT 120

Query: 121 AGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVP 180
           AGKPIHSAI SSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVP
Sbjct: 121 AGKPIHSAIASSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVP 180

Query: 181 MGVEVPFDLLGVLYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCS 240
           MGVEVPFDLLGVLYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFD VEKLEDAIKSNCS
Sbjct: 181 MGVEVPFDLLGVLYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDRVEKLEDAIKSNCS 240

Query: 241 RELVFYKR 249
           REL+FYKR
Sbjct: 241 RELIFYKR 248

[Close]

BLAST of CSPI06G29870 vs. NCBI nr
Match: XP_022950841.1 (uncharacterized protein LOC111453822 [Cucurbita moschata] >KAG6604060.1 hypothetical protein SDJN03_04669, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 438.3 bits (1126), Expect = 4.3e-119
Identity = 221/248 (89.11%), Postives = 235/248 (94.76%), Query Frame = 0


Query: 1   MPVAIANAAAPSFRHFNKLKLNTRLSSSLGAVHRDKKDMVATASSSTPNAGAYTTIKEIV 60
           MPVAIA+AAAP+FR+F  L LNTR SSSL A+ RDKKDMV T SSS+ NAGAYTTIKEIV
Sbjct: 1   MPVAIASAAAPNFRYFKTLNLNTRFSSSLCAIARDKKDMVTTVSSSSGNAGAYTTIKEIV 60

Query: 61  RFEKEIKKSKFIAIAGPVSSEQSAFSFLSQVRDPRATHNCWAYQVGDQYRSNDDGEPSGT 120
           RFEKEIKKSKFIAIAGPV++EQ+AFSFLSQVR+PRATHNCWAYQVGDQ+RSNDDGEPSGT
Sbjct: 61  RFEKEIKKSKFIAIAGPVTNEQTAFSFLSQVREPRATHNCWAYQVGDQFRSNDDGEPSGT 120

Query: 121 AGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVP 180
           AGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVP
Sbjct: 121 AGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVP 180

Query: 181 MGVEVPFDLLGVLYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCS 240
           MGVEVPF+LLG LYHQLQSF VEDIKQDYD GKDGITMVTFKVDFD VEKLEDAIKS+CS
Sbjct: 181 MGVEVPFNLLGALYHQLQSFHVEDIKQDYDCGKDGITMVTFKVDFDHVEKLEDAIKSHCS 240

Query: 241 RELVFYKR 249
           REL+FYK+
Sbjct: 241 RELIFYKQ 248

[Close]

BLAST of CSPI06G29870 vs. TAIR 10
Match: AT4G38090.1 (Ribosomal protein S5 domain 2-like superfamily protein )

HSP 1 Score: 320.1 bits (819), Expect = 1.6e-87
Identity = 158/204 (77.45%), Postives = 181/204 (88.73%), Query Frame = 0


Query: 45  SSTPNAGAYTTIKEIVRFEKEIKKSKFIAIAGPVSSEQSAFSFLSQVRDPRATHNCWAYQ 104
           S   N+G++TT+KE V  EKEIKKSKFIAIAGP+SSEQSA  FLSQVRDPRA+HNCWAY+
Sbjct: 30  SMASNSGSFTTLKETVSVEKEIKKSKFIAIAGPISSEQSAQMFLSQVRDPRASHNCWAYK 89

Query: 105 VGD-QYRSNDDGEPSGTAGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVA 164
           +GD  +R +DDGEPSGTAGKPI SAI+SSG+DRVMVVVIRYFGGIKLGTGGLVRAYGGV 
Sbjct: 90  IGDHHHRCSDDGEPSGTAGKPIQSAILSSGLDRVMVVVIRYFGGIKLGTGGLVRAYGGVT 149

Query: 165 SECLKSAQTCVVKSKVPMGVEVPFDLLGVLYHQLQSFQVEDIKQDYDSGKDGITMVTFKV 224
           S+CLK+A +C+VKSKV MGVEV FDLLGVLY+QLQS   EDIK+DYD+GKDG  MV+FKV
Sbjct: 150 SDCLKTAPSCLVKSKVQMGVEVTFDLLGVLYNQLQSCHAEDIKEDYDTGKDGTAMVSFKV 209

Query: 225 DFDCVEKLEDAIKSNCSRELVFYK 248
           +FD V+KLEDAIKSNC R+LVFYK
Sbjct: 210 EFDLVDKLEDAIKSNCRRDLVFYK 233

[Close]

BLAST of CSPI06G29870 vs. TAIR 10
Match: AT4G38090.4 (Ribosomal protein S5 domain 2-like superfamily protein )

HSP 1 Score: 307.8 bits (787), Expect = 8.2e-84
Identity = 154/204 (75.49%), Postives = 178/204 (87.25%), Query Frame = 0


Query: 45  SSTPNAGAYTTIKEIVRFEKEIKKSKFIAIAGPVSSEQSAFSFLSQVRDPRATHNCWAYQ 104
           S   N+G++TT+KE V  EKEIKKSKFIAIAGP+SSEQSA  FLSQVRDPRA+HNCWAY+
Sbjct: 30  SMASNSGSFTTLKETVSVEKEIKKSKFIAIAGPISSEQSAQMFLSQVRDPRASHNCWAYK 89

Query: 105 VGD-QYRSNDDGEPSGTAGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVA 164
           +GD  +R +DDGEPSGTAGKPI SAI+SSG+DRVMVVVIRYFGGIKLGTGGLVRAYGGV 
Sbjct: 90  IGDHHHRCSDDGEPSGTAGKPIQSAILSSGLDRVMVVVIRYFGGIKLGTGGLVRAYGGVT 149

Query: 165 SECLKSAQTCVVKSKVPMGVEVPFDLLGVLYHQLQSFQVEDIKQDYDSGKDGITMVTFKV 224
           S+CLK+A +C+V+    MGVEV FDLLGVLY+QLQS   EDIK+DYD+GKDG  MV+FKV
Sbjct: 150 SDCLKTAPSCLVQ----MGVEVTFDLLGVLYNQLQSCHAEDIKEDYDTGKDGTAMVSFKV 209

Query: 225 DFDCVEKLEDAIKSNCSRELVFYK 248
           +FD V+KLEDAIKSNC R+LVFYK
Sbjct: 210 EFDLVDKLEDAIKSNCRRDLVFYK 229

[Close]

BLAST of CSPI06G29870 vs. TAIR 10
Match: AT4G38090.2 (Ribosomal protein S5 domain 2-like superfamily protein )

HSP 1 Score: 240.7 bits (613), Expect = 1.2e-63
Identity = 120/154 (77.92%), Postives = 138/154 (89.61%), Query Frame = 0


Query: 45  SSTPNAGAYTTIKEIVRFEKEIKKSKFIAIAGPVSSEQSAFSFLSQVRDPRATHNCWAYQ 104
           S   N+G++TT+KE V  EKEIKKSKFIAIAGP+SSEQSA  FLSQVRDPRA+HNCWAY+
Sbjct: 30  SMASNSGSFTTLKETVSVEKEIKKSKFIAIAGPISSEQSAQMFLSQVRDPRASHNCWAYK 89

Query: 105 VGD-QYRSNDDGEPSGTAGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVA 164
           +GD  +R +DDGEPSGTAGKPI SAI+SSG+DRVMVVVIRYFGGIKLGTGGLVRAYGGV 
Sbjct: 90  IGDHHHRCSDDGEPSGTAGKPIQSAILSSGLDRVMVVVIRYFGGIKLGTGGLVRAYGGVT 149

Query: 165 SECLKSAQTCVVKSKVPMGVEVPFDLLGVLYHQL 198
           S+CLK+A +C+VKSKV MGVEV FDLLGVLY+Q+
Sbjct: 150 SDCLKTAPSCLVKSKVQMGVEVTFDLLGVLYNQV 183

[Close]

BLAST of CSPI06G29870 vs. TAIR 10
Match: AT4G38090.3 (Ribosomal protein S5 domain 2-like superfamily protein )

HSP 1 Score: 213.4 bits (542), Expect = 2.1e-55
Identity = 106/136 (77.94%), Postives = 122/136 (89.71%), Query Frame = 0


Query: 45  SSTPNAGAYTTIKEIVRFEKEIKKSKFIAIAGPVSSEQSAFSFLSQVRDPRATHNCWAYQ 104
           S   N+G++TT+KE V  EKEIKKSKFIAIAGP+SSEQSA  FLSQVRDPRA+HNCWAY+
Sbjct: 30  SMASNSGSFTTLKETVSVEKEIKKSKFIAIAGPISSEQSAQMFLSQVRDPRASHNCWAYK 89

Query: 105 VGD-QYRSNDDGEPSGTAGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVA 164
           +GD  +R +DDGEPSGTAGKPI SAI+SSG+DRVMVVVIRYFGGIKLGTGGLVRAYGGV 
Sbjct: 90  IGDHHHRCSDDGEPSGTAGKPIQSAILSSGLDRVMVVVIRYFGGIKLGTGGLVRAYGGVT 149

Query: 165 SECLKSAQTCVVKSKV 180
           S+CLK+A +C+VKSKV
Sbjct: 150 SDCLKTAPSCLVKSKV 165

The following BLAST results are available for this feature:

BLAST of CSPI06G29870 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P32438	2.3e-30	48.55	IMPACT family member in pol 5'region (Fragment) OS=Thermus thermophilus OX=274 P...	[more]
P44842	1.0e-22	36.75	IMPACT family member HI_0722 OS=Haemophilus influenzae (strain ATCC 51907 / DSM ...	[more]
P32437	2.5e-21	40.65	IMPACT family member YvyE OS=Bacillus subtilis (strain 168) OX=224308 GN=yvyE PE...	[more]
P27862	1.4e-19	40.00	IMPACT family member YigZ OS=Escherichia coli (strain K12) OX=83333 GN=yigZ PE=1...	[more]

BLAST of CSPI06G29870 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KGN8	6.0e-135	100.00	UPF0029 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G499080 PE=...	[more]
A0A5D3CN06	1.7e-129	96.37	IMPACT family member in pol 5'region isoform X1 OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S3B202	1.7e-129	96.37	IMPACT family member in pol 5'region isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1BU50	2.5e-120	91.13	uncharacterized protein LOC111005799 OS=Momordica charantia OX=3673 GN=LOC111005...	[more]
A0A6J1GFX5	2.1e-119	89.11	uncharacterized protein LOC111453822 OS=Cucurbita moschata OX=3662 GN=LOC1114538...	[more]

BLAST of CSPI06G29870 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004143447.1	1.2e-134	100.00	uncharacterized protein LOC101204297 isoform X1 [Cucumis sativus] >KGN48713.1 hy...	[more]
XP_008440556.1	3.5e-129	96.37	PREDICTED: IMPACT family member in pol 5'region isoform X1 [Cucumis melo] >KAA00...	[more]
XP_038881266.1	2.2e-123	90.66	IMPACT family member in pol 5'region [Benincasa hispida]	[more]
XP_022133126.1	5.1e-120	91.13	uncharacterized protein LOC111005799 [Momordica charantia]	[more]
XP_022950841.1	4.3e-119	89.11	uncharacterized protein LOC111453822 [Cucurbita moschata] >KAG6604060.1 hypothet...	[more]

BLAST of CSPI06G29870 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38090.1	1.6e-87	77.45	Ribosomal protein S5 domain 2-like superfamily protein	[more]
AT4G38090.4	8.2e-84	75.49	Ribosomal protein S5 domain 2-like superfamily protein	[more]
AT4G38090.2	1.2e-63	77.92	Ribosomal protein S5 domain 2-like superfamily protein	[more]
AT4G38090.3	2.1e-55	77.94	Ribosomal protein S5 domain 2-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036956	Impact, N-terminal domain superfamily	GENE3D	3.30.230.30		coord: 52..175 e-value: 8.6E-42 score: 143.7
IPR001498	Impact, N-terminal	PFAM	PF01205	UPF0029	coord: 67..167 e-value: 2.2E-26 score: 92.2
None	No IPR available	PANTHER	PTHR16301:SF20	IMPACT FAMILY MEMBER YIGZ	coord: 52..247
IPR023582	Impact family	PANTHER	PTHR16301	IMPACT-RELATED	coord: 52..247
IPR020568	Ribosomal protein S5 domain 2-type fold	SUPERFAMILY	54211	Ribosomal protein S5 domain 2-like	coord: 53..171

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G29870.1	CSPI06G29870.1	mRNA
CSPI06G29870.2	CSPI06G29870.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006446	regulation of translational initiation
cellular_component	GO:0005840	ribosome