CSPI06G26910 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI06G26910
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	RNA-binding protein 39 isoform X2
Location	Chr6: 23712493 .. 23720571 (-)
RNA-Seq Expression	CSPI06G26910
Synteny	CSPI06G26910

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTCGCGGATTATTGTGAAGCCAAGCCAACCAATAGTTCCTCTCCCAGAAACCCCTTCAAAAAACCCTAGAATTCTCAATTCCTCGAAATTTCATCCCTAGCTTAGCTTCGCTGATTTTGTTCCAACGCGAATTCCGGCGAGATCTCAAGCTTTTCGTTTCGCGGGAAACGAATTTCTGAAGGTTCGATGGACTTCGACGAGTACGATTACTTGGAGAAAGCCGTGGAGGAGCAAGATGATAGGGAGACGAAGAAACCAAAGAGGAGCGACAGTGAGAGGAACGAGAAAAGCACCAGAAAGAGAGAGGTAGACGAGGAAGCTGGCTCCGGTGGTCGCGAGGACGAGGAGGTGAAAGTCAAGCGGTCGAGAAGCGAGCATGAAAATGGGAAGGAGGATAGGGATCACTCGGGGCGAGCGAGGGATCGGCATCGAAGAGACAGAGAGGAGGAAACAGACGGGGGAAAAGAGAGGGATAAAGAAAGGAATCGTACGAGAGAGAGGGGTAGCAGTGAGAAGGAAAGGGACAGAGACAGGGACAGAGAGGAGAGAGATAGAGATAGAGATAGACATAAGGAGAAGGAGAGGGAGAGAGATAAGGATAGAAAGGATAAGGAAAGAGATAGGGAGAGGCATAAGGAGAAGGACAGAGAGAGGGACAAGGATAGGAGGGACAAGGAGAGGGAGAAGGAGAAAGAAAGAGAGAGGAGAGACAGGGAGAGGAGGGAGCGGGAGAGGGAAGAGGAGAGATCGAGGCGAAGCCGAAGCCGGTCCGTTCGGGAGCGAGAACGTGAAGTTGATGTCAGAGAAAGCAGGTAACTGTTCATTATGTGCCTTACGTTGAACCGGGATCTTGAAAGCTTACAGTTGACTGTTGGCTGTTGCTTCTATACGTTTATTGTCCGTCTGTTCCTTATTATTCTTGAAAATTATAGGGCAGTGTGTTTGATCAAGAAACAAACTTATCATGGAAAATGTTCAAGGATAGAGACTCCTCAGTGGATTAAAAATAACCAATCAAGCAATAAAATAAAGAAAAGATCCCAGACATTTCAAGAGCCAAAAGATAAATAAAACATTTGAGAACATGAGGGAATATACTTAACCATGAGAGAACAACCTGAGAGGTGAGCGAGGAAAAGCAACAGAAACGGCTTCCACCAAGCACCAAACACTGCCATGCTACAGGCTAAATGGAGATTAACTGGATAACTACCCAAAACTGGATAGAAAATTTCCCTCGTGAAACAAGCCATTAACTTTCCAACCAAAATCACTCATGCACACCAAATGAGCCACACACTAATGCTTCAACAAAGCACAGAACCATAAATAAGTTAATCTGGAAAAGCCACACTTGGTTGCTAATCCTTTCCTTTGAACTTCCAAGTCCTAAACCTCTTGGAATCCATAAGGTGATCTTCACAACGTTACACACCAGCCCACCTCGTTAGTTGAGATGAAGAGTTTGAGGCATAATAAATTTTTTTATGCCTATACAAAAATTGTTTACCAACATTGTTCTTAAATTTGAATTCGTTGTATGGAATTTGTCTCGTAAATAAATTGTTGTATTAAACTTGTGGCTTTGATTAGAATCCATTTATGCTTTGGATAGAGAAGCTTGTAAATATTAGAACTAGGCTATTGGGTTGGCATTATTGATAAACCAGATATTCCATGGAAATTAGACCTCTTTCACAACCGGTAACGGCGGTAGATTTTATTTTATTCTATTTTTACTTGTTTGAATGGAATAAACACCAGTGTTCCGTTGACGAGTGCAAAGGCTTTCTCGACAGTTACCAAATTGGTATATTGCAGCAAATAGATTAAGAAGTTGATAAACAACCAATAATAACCAACACTATGGTGTGGAAATCCTAGAAACCCATAATTTATTTATTTTTAATTTGCTCAGGATTTTCAATAATGAAGGCACCAAAATGGAATCATAAAAGTTTGGACATCTAAGTTGTTTTTATATGTTTACTATTCACGCCCTCTTCTTAGTACAGTGCATCGGCTAAATTGCTGATATACTGCACTGAAAGTCTTGGTGATAAAAAGTTTTAATTTTATCAATAACTATCCCTTGTAATATTGAGTGGAAAGAAGAAACTGAGTCATTCTAAATCTTTTAAATATTTGTTTTTAATTTAAATAACTATTTTCCTTCAATTTTACCTGATATTTTGGGTGTGTGAATGGCAGGAGAATGAAGGAAAAGAAAGACACGACAGAGCCTGAAGCGGATCCAGAGAGAGATCAAAGAACTGTATTTGCTTATCAGGTTAGTGGCTTCTCTTATTTTCCTTACATTTCATGTTCGGTTTATATTTTGCTTATCATTTTTGTTATCCTACTATTCTTTGTACAGATGCCTTTGAAGGCCACAGAGAGAGATGTTTACGAATTCTTTTCAAAAGCGGGAAAGGTATTTGAAACTTATTACTCAAGCGAAACATTTGTGTATTTATTTTTTCTTTTGCTATAATTGAACAACTAAAGGTGTTAGCAATCATACAGTCATCTATATTATTTTCAGTGTCATATGCATGCCCCTTGGGCCTTGTACTTGTTCACCTCTGTGGCATGTATTCTATGTGTTGTGCATTTTTGTTGCAATGTTACTGCTAGAAATGTTATGATTGCATAGATATTGAGATAGATTTGCTTCATATTGCAGTTACTGTTCCTCTGCCTTCAGTTTCGAAACTATAATCAATTTCTTCTATCTCAACATTCTATTTATATGGGGTGAGTGAAAATGTATGAGTTCTGTCGTCATCTCACTGATGGCTGAATGGCTCTTTGCCTCGAGTGTAAAGAATAGAAACCTTCATTGCTTCTTCATTGCTGGCTTCCTAAAACAACCTGTTTTCATTGTTCTTTCTATTTTCAGGTGAGAGATGTCCGGCTGATCATGGACAGAAATTCTAGACGGTCAAAAGGAGTTGGGTATGTGGTCTTGAGCGAGCAATTTTTGTATTGTATGCTTGTGATCTTGTTAATATGGTTATTAACATAGTAGTTTTCAAGTATCAAATTTAACTGTATTTTTAAATGAACTAGCAATGCGATAATGATGAGGGATGGTGGGAATACAATGCAGTCATGTTTAATCAATTCATGCTGCTTGTTCAAGGTAGATAACATAAACCTGAGGTTTCCTTTGTTGTTTTCCCCATCGTACTCCTAATTTTGCTCCTCTATGTTTTTGTGCAGATAAGAAACAGTCCTAACTCCTATGACTCTGTTATCTCTGGTCTTGGTTTTAGAATCATTTCTTTCTATTATGAAATTTTCTTGGTTCGAATTAACTTTTAAAGATTGTTTTATTACACTGTATTAAAATGAACATGCTTGGCTGGGTATCATCTACTTTCATTGTTTCTTTTTCCTGAAAAGTTGAAGAAATTGAGAAAGTTTGTTTTCTGTGGCATCTTGACTTCCCCATTGTGTTTACTGTGGACTAATATATATATATTAAAATTATTACTATAAAACACTGTCCAATTTTTAAACATGGATATATGCTCATTGAAAAAATTAGAAAGGGTGATGAATAGTTACCCTACTTCTCGTCTAAGCTGGTCATCTGGTATTTGGTTATGTGTTGCTTCGTCATTTGATGAACTGATCTGACCATTAAATCAGTTGGAAGAAACTAAGAGGTCTCCGTGTATTTATTTATGCTTTGTCAAATTTGCTGCTTATTTTTGCCGTCTCATATTCTAATAAGTTTACTGTGAGGCATTGATTAAACTGCAGGTATGTTGAGTTTTATGATGCGATGTCTGTGCCTATGGCTATTGCTCTCTCTGGTCAACTACTTCTTGGGCAACCTGTAATGGTTAAACCTTCGGAGGCTGAGAAGAATCTTGTTCAATCAAATACAACTGGGGCCTCTGGTGCAGGTCCATATGGAGCAGTAGACAGGAAACTATATGTTGGAAATCTACACTTTAATATGACAGAAACTCACCTTCGAGAGGTACTAAGATCAATTAATCTGTGGAATTTTGTTTCAAGATGCTCATATTTGATTTCATCTCATATGCTGTTATTTTCTATACAAGTGACAACTATAGGATTCCATGAATAATAGGCCTATCGATGATTTAGAATTATTTGCTATGGCTCTTAAGTAACTGTAGCATTGTAACCTTTTGGCTACGGTAGTTATTCCCTTTCGTTCAGATAGGTTTCACAGGAAATGACAGCCCAACTTGCCAAGGACTAACTTGTGAGGGCCATCCATCTCTCTGTAGAATCTGTTAATTACACAGAAAATGCACCTGTATCCTAGTTTTCAGAAAACACAGCATTCACTACATGTAAAGAAGATTCAGAAACAACTTAACTTCCCCATTTAAAATGTTCAAACAAGGAAATTAACTTCCCTAATCAAAATATTCAAACAAGGAAACCTAAGACTGACTTCTAAATATAGAAACAGGAAACAGCTACATTTCCATGTTTTCATTCATCGAATAAATCTTCTGGATTGGAAGTCTAACAGATCATCACTTCTTTTCTGATTAGATTTTTGAAGCATTTGGTCCTGTGGAGCTTGTGCAGTTACCTCTTGACCTTGAGTCCGGTCACTGTAAGGGTTTTGGATTTGTTCAAGTGGGTAATCATTTATTATCAACTTTTGCAAGTTTTTGATGATGTATCGCATCCATAGATTCGTAAGGCTCTGTCTTAATTTTTTGAATTCTTTCCAGTTTGCCCATCTAGAGCATGCAAAGGCTGCACAAAGCTTGAATGGGAAATTAGAAATTGCTGGCCGAACCATCAAGGTAGTGTTCTACTAGAACCTTTCAGATTTGACTTATGTTCAGTACTGATATTTTTATTTGTTATTAGTGCCTCTAAGGAATGATGGTGTCCTTGGATTTGTGTGTTCTAAATAATGCTCTGTTTGTACAGGTTTCATCTGTAACGGATCACATTGGAGCACAAGAGAGCGTTGCAAAATCAAACGACCTTGATGATGATGAAGGAGGCGGTCTGGTTGGTGTATAGTTTTCTTTTATGATTAAATAAATGTCTTTTTACAATTCTTTTAGCATGTTTTCTTTTTAGCACAAGAATTTGGTTTTTACTATAGTTGATGTTTGAAAATATTTAATGTGGCTGTCTCATAAGTGATCATCTCGTGTTTAAAGTATATTGCCCTTGTAATAATGATATAAAATTTGAAGACATATTTTTGCTTTCAATTATGGAGACTAGGTGAATTTCCTTTGTGTGAGCACCTACCATGAGTGCGTGCTTATAGCAACATTGCAATGGCCTGTCATCGTTTTAAATAATTGCAATGACTTTCCTCTCCATCTTCCTATCATAATATAATTGCGCTTGGTGTTGTTAGGTAATTCTTGTTTTATATAGGAGAAAAGAAGAAATGAAAAATTAGACTATTGACATCAGATTATGATCATGTGTCATATCATTTATTTGATGACTGTTGAACTGTGTGGCTGAATTTTCTCTTTATTCTCTTCCAACTATAGAGTGCTTTATAGTTACTCCTTGGTGGTATCATTTGTACGTTTCATTACATTCATTAACATATTAATTTTCTGAAGAATTGCTTGCTAATTGAAATGTCTAATTGCAGGCATTGAATGCTCAATCAAGAGCTCTGCTTATGCAGAAGCTTGACCGCACTGGCATTGCTACTAGGTTTGTCTCCCTTTTGGCATGATTAAGTAGCAGGATGTCCTAACTTTCCTCTGTAGTCGTTAGTGCGCTTATATCTTCTTTGGATGTATTTGTATTCTGTAAGAAAGAAATATTGGATCAATGGAAGTTAACTTTTTCATGGTTATTGCTTCATGGTTTCAGTATTGCAGGATCTCTTGGAGCTCCAGTGTTGAATGGGTCAGCCCCAAATCAGAGATCTACGAGCTTGCCTGTAAATGGTCAAGCTGCAGTTGCTGCACCAGTACTTCCGGCGAATTTTACTCCACCTGTTTTACAATCTGTTGGCAGTCCTAGTGAATGTTTACTATTGAAAAACATGTTTGATCCTTCGACGGAGGTACTGAGTACTTGTATTTTCTGTTTTCATCTTTCAAGCTGGATTATTTATTAGATGAATCATCTTGCAGACAGCACCAGATTTTGACATGGAGATCAAAGAAGATGTTGAAGAGGAGTGTTCTAAATACGGCCACGTTAAACATATATATGTGGATAAGTGAGTATTTTTCTTGTCCCCATAATCATATTATATCTGGTCATATTATTGGAGAGGAGTGTTCTAAATACGGTCACGTTAAACATATATATGTGGATAACTGAGTATTTTTCTGTCCCCGTAATCATATCAACCATTTCTGGTCATATTATCAAGTGAAACTTTATTTATTTTTTGGTTCAAACTTATATTTCTGCTTTCTTTTTAAGTTACTCATATATTTCTACAACACTTAAAACAGGATGTTTCCTGTTCACATCTTTCTTGAATTTGTTCTGTTACGTGTTGGGGATTGACTTGGATCTTTGATCCTCATTTGCAGATACTTCCGGAATAGGGATGGAAAAAAATTACTAATGCCTTCATGGATGGGAGAATCTTATTTTCCCTATTTAATTTTAGGCTGGTTATGGAAAGGGCTATCTTATGCTGACATTAGCCTTTGTCATGCATTATCACAAATTTATAACTATACTTGAATGACAACATTTTCCATTTAGTTTATACACAGCCAGATTAGTTATTTAACTAGAACTAGTTGTAGTAATGATCGAACATTTAGATGGTACTTAAATTATTTGGACTTTTACATGGTTAGCTAATGATGGTTCGGGAAACTTACTTGAATTTGCTTGACTTTTTCACTGCAGCCTCACTGTCAATATATCTAGAAGTTAAAAGTTTAGGAAGTTAAATAATATGCAGTTATTGCTTCCATAAAAAGAATGCAATTATTGTTAGGCTCATCATTTTATGTTGATGGTACTTGAATTAACGGAGAAGAGAGAGGGCAGGTAAAGGTAGGGGGGATAGTGTAGGGAATTGCTCTTACACTTCATGCATTTGCTAACGTATTAAGACTCCATTTGATAACTGTTGCGTTAAAAGTTTTAAGTTTTTGAAATCTACCTTCATCTTTGTATTTCTATATTATGTTCACTTTCTACTAATGTTTTCGAAAACTAAATGGGCAGCTTTTTAAATATAGTTTTTACTTTTAGATTTTGACTGAGAATTCAAATTTCTTTATAACAGTGTCATTAAATTGGGAGAAAACCTCTGAACCATAAGTGATGCTCTCTCCACCTTTATATCAGAGAACGAATCTTTCGATTACGTGATCAAATAGATGTTTGTTCTATCTTTTCATCGTTTTTCTTTTTCTTTTATTATTTTTCAATGTGCAGAAATAGCGCGGGATGTGTGTATCTGCAGTATGATACCGTGGAAGCGGCCATAAATGCTCAACGTGCAATGCACCTGAGATGGTTTGCAGGCAGACAGATATCTGTCTTGTTCATGGTTAGTTATTAACAAGAAATTGTGCTCTCTTGATTTATTTCTTTTGAAACTCGTTTCCTTTTGTTGGTCCTCAGTTTCTGCTTCTCAATATCATGTTGTTCTGTCTTGCAGCAACCGCAGGTGTATGAAGCTAAGTTTATAGGAGCTTGAATGCCGTCTGTGGTTCTTATCACTTACGAGTAATCAGGAGATTCCTCTAGCCAATCCATGCTCTATATTTTCTCGGGTGACATCCCATCCTGTCCCGTTCGGTCAATGTCTAATGTCTTCTCCTTTCTGTAATAGGTGGTTATAGAAGTACTGGTTAAAATTGGGTCAATTGTCTTAATAGAAAAGTAAAACGTTGGGTTCTTTTCATATGGGGGAGGATATTGGTACCTATTCTTAATTTCCTGCTTTGTAACACCCAGTGTCAAGCGAATACTTTTTGTTGGCTTGGATGCATTTAGTGTTGACTTCTTATGAACATTCCTCTTGTAATGCATTTTGTACAAGTTTTCCAGAAATTAGTAAACATTTCTTTGGAGTTGGGTTTTCTTGCATCTACAGGACTCATTTCTTCCAG

mRNA sequence

ACTCGCGGATTATTGTGAAGCCAAGCCAACCAATAGTTCCTCTCCCAGAAACCCCTTCAAAAAACCCTAGAATTCTCAATTCCTCGAAATTTCATCCCTAGCTTAGCTTCGCTGATTTTGTTCCAACGCGAATTCCGGCGAGATCTCAAGCTTTTCGTTTCGCGGGAAACGAATTTCTGAAGGTTCGATGGACTTCGACGAGTACGATTACTTGGAGAAAGCCGTGGAGGAGCAAGATGATAGGGAGACGAAGAAACCAAAGAGGAGCGACAGTGAGAGGAACGAGAAAAGCACCAGAAAGAGAGAGGTAGACGAGGAAGCTGGCTCCGGTGGTCGCGAGGACGAGGAGGTGAAAGTCAAGCGGTCGAGAAGCGAGCATGAAAATGGGAAGGAGGATAGGGATCACTCGGGGCGAGCGAGGGATCGGCATCGAAGAGACAGAGAGGAGGAAACAGACGGGGGAAAAGAGAGGGATAAAGAAAGGAATCGTACGAGAGAGAGGGGTAGCAGTGAGAAGGAAAGGGACAGAGACAGGGACAGAGAGGAGAGAGATAGAGATAGAGATAGACATAAGGAGAAGGAGAGGGAGAGAGATAAGGATAGAAAGGATAAGGAAAGAGATAGGGAGAGGCATAAGGAGAAGGACAGAGAGAGGGACAAGGATAGGAGGGACAAGGAGAGGGAGAAGGAGAAAGAAAGAGAGAGGAGAGACAGGGAGAGGAGGGAGCGGGAGAGGGAAGAGGAGAGATCGAGGCGAAGCCGAAGCCGGTCCGTTCGGGAGCGAGAACGTGAAGTTGATGTCAGAGAAAGCAGGAGAATGAAGGAAAAGAAAGACACGACAGAGCCTGAAGCGGATCCAGAGAGAGATCAAAGAACTGTATTTGCTTATCAGATGCCTTTGAAGGCCACAGAGAGAGATGTTTACGAATTCTTTTCAAAAGCGGGAAAGGTGAGAGATGTCCGGCTGATCATGGACAGAAATTCTAGACGGTCAAAAGGAGTTGGGTATGTTGAGTTTTATGATGCGATGTCTGTGCCTATGGCTATTGCTCTCTCTGGTCAACTACTTCTTGGGCAACCTGTAATGGTTAAACCTTCGGAGGCTGAGAAGAATCTTGTTCAATCAAATACAACTGGGGCCTCTGGTGCAGGTCCATATGGAGCAGTAGACAGGAAACTATATGTTGGAAATCTACACTTTAATATGACAGAAACTCACCTTCGAGAGATTTTTGAAGCATTTGGTCCTGTGGAGCTTGTGCAGTTACCTCTTGACCTTGAGTCCGGTCACTGTAAGGGTTTTGGATTTGTTCAATTTGCCCATCTAGAGCATGCAAAGGCTGCACAAAGCTTGAATGGGAAATTAGAAATTGCTGGCCGAACCATCAAGGTTTCATCTGTAACGGATCACATTGGAGCACAAGAGAGCGTTGCAAAATCAAACGACCTTGATGATGATGAAGGAGGCGGTCTGGCATTGAATGCTCAATCAAGAGCTCTGCTTATGCAGAAGCTTGACCGCACTGGCATTGCTACTAGTATTGCAGGATCTCTTGGAGCTCCAGTGTTGAATGGGTCAGCCCCAAATCAGAGATCTACGAGCTTGCCTGTAAATGGTCAAGCTGCAGTTGCTGCACCAGTACTTCCGGCGAATTTTACTCCACCTGTTTTACAATCTGTTGGCAGTCCTAGTGAATGTTTACTATTGAAAAACATGTTTGATCCTTCGACGGAGACAGCACCAGATTTTGACATGGAGATCAAAGAAGATGTTGAAGAGGAGTGTTCTAAATACGGCCACGTTAAACATATATATGTGGATAAAAATAGCGCGGGATGTGTGTATCTGCAGTATGATACCGTGGAAGCGGCCATAAATGCTCAACGTGCAATGCACCTGAGATGGTTTGCAGGCAGACAGATATCTGTCTTGTTCATGCAACCGCAGGTGTATGAAGCTAAGTTTATAGGAGCTTGAATGCCGTCTGTGGTTCTTATCACTTACGAGTAATCAGGAGATTCCTCTAGCCAATCCATGCTCTATATTTTCTCGGGTGACATCCCATCCTGTCCCGTTCGGTCAATGTCTAATGTCTTCTCCTTTCTGTAATAGGTGGTTATAGAAGTACTGGTTAAAATTGGGTCAATTGTCTTAATAGAAAAGTAAAACGTTGGGTTCTTTTCATATGGGGGAGGATATTGGTACCTATTCTTAATTTCCTGCTTTGTAACACCCAGTGTCAAGCGAATACTTTTTGTTGGCTTGGATGCATTTAGTGTTGACTTCTTATGAACATTCCTCTTGTAATGCATTTTGTACAAGTTTTCCAGAAATTAGTAAACATTTCTTTGGAGTTGGGTTTTCTTGCATCTACAGGACTCATTTCTTCCAG

Coding sequence (CDS)

ATGGACTTCGACGAGTACGATTACTTGGAGAAAGCCGTGGAGGAGCAAGATGATAGGGAGACGAAGAAACCAAAGAGGAGCGACAGTGAGAGGAACGAGAAAAGCACCAGAAAGAGAGAGGTAGACGAGGAAGCTGGCTCCGGTGGTCGCGAGGACGAGGAGGTGAAAGTCAAGCGGTCGAGAAGCGAGCATGAAAATGGGAAGGAGGATAGGGATCACTCGGGGCGAGCGAGGGATCGGCATCGAAGAGACAGAGAGGAGGAAACAGACGGGGGAAAAGAGAGGGATAAAGAAAGGAATCGTACGAGAGAGAGGGGTAGCAGTGAGAAGGAAAGGGACAGAGACAGGGACAGAGAGGAGAGAGATAGAGATAGAGATAGACATAAGGAGAAGGAGAGGGAGAGAGATAAGGATAGAAAGGATAAGGAAAGAGATAGGGAGAGGCATAAGGAGAAGGACAGAGAGAGGGACAAGGATAGGAGGGACAAGGAGAGGGAGAAGGAGAAAGAAAGAGAGAGGAGAGACAGGGAGAGGAGGGAGCGGGAGAGGGAAGAGGAGAGATCGAGGCGAAGCCGAAGCCGGTCCGTTCGGGAGCGAGAACGTGAAGTTGATGTCAGAGAAAGCAGGAGAATGAAGGAAAAGAAAGACACGACAGAGCCTGAAGCGGATCCAGAGAGAGATCAAAGAACTGTATTTGCTTATCAGATGCCTTTGAAGGCCACAGAGAGAGATGTTTACGAATTCTTTTCAAAAGCGGGAAAGGTGAGAGATGTCCGGCTGATCATGGACAGAAATTCTAGACGGTCAAAAGGAGTTGGGTATGTTGAGTTTTATGATGCGATGTCTGTGCCTATGGCTATTGCTCTCTCTGGTCAACTACTTCTTGGGCAACCTGTAATGGTTAAACCTTCGGAGGCTGAGAAGAATCTTGTTCAATCAAATACAACTGGGGCCTCTGGTGCAGGTCCATATGGAGCAGTAGACAGGAAACTATATGTTGGAAATCTACACTTTAATATGACAGAAACTCACCTTCGAGAGATTTTTGAAGCATTTGGTCCTGTGGAGCTTGTGCAGTTACCTCTTGACCTTGAGTCCGGTCACTGTAAGGGTTTTGGATTTGTTCAATTTGCCCATCTAGAGCATGCAAAGGCTGCACAAAGCTTGAATGGGAAATTAGAAATTGCTGGCCGAACCATCAAGGTTTCATCTGTAACGGATCACATTGGAGCACAAGAGAGCGTTGCAAAATCAAACGACCTTGATGATGATGAAGGAGGCGGTCTGGCATTGAATGCTCAATCAAGAGCTCTGCTTATGCAGAAGCTTGACCGCACTGGCATTGCTACTAGTATTGCAGGATCTCTTGGAGCTCCAGTGTTGAATGGGTCAGCCCCAAATCAGAGATCTACGAGCTTGCCTGTAAATGGTCAAGCTGCAGTTGCTGCACCAGTACTTCCGGCGAATTTTACTCCACCTGTTTTACAATCTGTTGGCAGTCCTAGTGAATGTTTACTATTGAAAAACATGTTTGATCCTTCGACGGAGACAGCACCAGATTTTGACATGGAGATCAAAGAAGATGTTGAAGAGGAGTGTTCTAAATACGGCCACGTTAAACATATATATGTGGATAAAAATAGCGCGGGATGTGTGTATCTGCAGTATGATACCGTGGAAGCGGCCATAAATGCTCAACGTGCAATGCACCTGAGATGGTTTGCAGGCAGACAGATATCTGTCTTGTTCATGCAACCGCAGGTGTATGAAGCTAAGTTTATAGGAGCTTGA

Protein sequence

MDFDEYDYLEKAVEEQDDRETKKPKRSDSERNEKSTRKREVDEEAGSGGREDEEVKVKRSRSEHENGKEDRDHSGRARDRHRRDREEETDGGKERDKERNRTRERGSSEKERDRDRDREERDRDRDRHKEKERERDKDRKDKERDRERHKEKDRERDKDRRDKEREKEKERERRDRERREREREEERSRRSRSRSVREREREVDVRESRRMKEKKDTTEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTTGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVELVQLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESVAKSNDLDDDEGGGLALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSTSLPVNGQAAVAAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECSKYGHVKHIYVDKNSAGCVYLQYDTVEAAINAQRAMHLRWFAGRQISVLFMQPQVYEAKFIGA*

Homology

[Close]

BLAST of CSPI06G26910 vs. ExPASy Swiss-Prot
Match: Q5RC80 (RNA-binding protein 39 OS=Pongo abelii OX=9601 GN=RBM39 PE=2 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 1.3e-52
Identity = 216/542 (39.85%), Postives = 297/542 (54.80%), Query Frame = 0


Query: 69  EDRDHSGRARDRHRRDREE--ETDGGKERDKERNRTRERG-SSEKERDRDRDREERDRDR 128
           +D D        +++D  +    +G +ER K+R +++ R  S E++R + ++R +R RDR
Sbjct: 3   DDIDIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSHERKRSKSKER-KRSRDR 62

Query: 129 DRHKEKERERDKDRKDKERDRERHKEKDRERDKDRRDKEREKEKERERRDRERREREREE 188
           +R K K RER + R  KER R R + +DR      R      +     R +       + 
Sbjct: 63  ERKKSKSRERKRSR-SKERRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKL 122

Query: 189 ERSRRSRSRSVREREREVDVRESRRMKEKKDTTEPEADPERDQRTVFAYQMPLKATERDV 248
            R RRSRS+S   +++         ++E  D   PE   ERD RTVF  Q+  +   RD+
Sbjct: 123 SR-RRSRSKSPFRKDKS-------PVREPIDNLTPE---ERDARTVFCMQLAARIRPRDL 182

Query: 249 YEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLGQPVMVKPSE 308
            EFFS  GKVRDVR+I DRNSRRSKG+ YVEF D  SVP+AI L+GQ +LG P++V+ S+
Sbjct: 183 EEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQ 242

Query: 309 AEKN--LVQSNTTGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVELVQLPLD 368
           AEKN     +N      AGP      +LYVG+LHFN+TE  LR IFE FG +E +QL +D
Sbjct: 243 AEKNRAAAMANNLQKGSAGP-----MRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMD 302

Query: 369 LESGHCKGFGFVQFAHLEHA-KAAQSLNGKLEIAGRTIKVSSVTDHIGAQESVAKSNDLD 428
            E+G  KG+GF+ F+  E A KA + LNG  E+AGR +KV  VT+   A  S +   D D
Sbjct: 303 SETGRSKGYGFITFSDSECAKKALEQLNG-FELAGRPMKVGHVTERTDA-SSASSFLDSD 362

Query: 429 DDEGGGLALNAQSRALLMQKL-DRTGI--------ATSIAGSLGAPVLNGSAPNQRSTSL 488
           + E  G+ L    R  LM +L + TG+        A  ++GSL        A  Q   S 
Sbjct: 363 ELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQMSGSL---AFGAVADLQTRLSQ 422

Query: 489 PVNGQA-AVAAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEE 548
                A A AA V P              ++C  L NMF+P TE    +D EIK+DV EE
Sbjct: 423 QTEASALAAAASVQPL------------ATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEE 482

Query: 549 CSKYGHVKHIYVDKNSA-GCVYLQYDTVEAAINAQRAMHLRWFAGRQISVLFMQPQVYEA 594
           C+K+G V HIYVDKNSA G VY++  ++ AAI A  A+H RWFAG+ I+  ++    Y  
Sbjct: 483 CNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHN 509

[Close]

BLAST of CSPI06G26910 vs. ExPASy Swiss-Prot
Match: Q14498 (RNA-binding protein 39 OS=Homo sapiens OX=9606 GN=RBM39 PE=1 SV=2)

HSP 1 Score: 208.0 bits (528), Expect = 3.0e-52
Identity = 217/545 (39.82%), Postives = 299/545 (54.86%), Query Frame = 0


Query: 69  EDRDHSGRARDRHRRDREE--ETDGGKERDKERNRTRERG-SSEKERDRDRDREERDRDR 128
           +D D        +++D  +    +G +ER K+R +++ R  S E++R + ++R +R RDR
Sbjct: 3   DDIDIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSHERKRSKSKER-KRSRDR 62

Query: 129 DRHKEKERERDKDRKDKERDRERHKEKDRERDKDRRDKEREKEKERERRDRERREREREE 188
           +R K K RER + R  KER R R + +DR      R      +     R +       + 
Sbjct: 63  ERKKSKSRERKRSR-SKERRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKL 122

Query: 189 ERSRRSRSRSVREREREVDVRESRRMKEKKDTTEPEADPERDQRTVFAYQMPLKATERDV 248
            R RRSRS+S   +++         ++E  D   PE   ERD RTVF  Q+  +   RD+
Sbjct: 123 SR-RRSRSKSPFRKDKS-------PVREPIDNLTPE---ERDARTVFCMQLAARIRPRDL 182

Query: 249 YEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLGQPVMVKPSE 308
            EFFS  GKVRDVR+I DRNSRRSKG+ YVEF D  SVP+AI L+GQ +LG P++V+ S+
Sbjct: 183 EEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQ 242

Query: 309 AEKN--LVQSNTTGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVELVQLPLD 368
           AEKN     +N      AGP      +LYVG+LHFN+TE  LR IFE FG +E +QL +D
Sbjct: 243 AEKNRAAAMANNLQKGSAGP-----MRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMD 302

Query: 369 LESGHCKGFGFVQFAHLEHA-KAAQSLNGKLEIAGRTIKVSSVTDHIGAQESVAKSNDLD 428
            E+G  KG+GF+ F+  E A KA + LNG  E+AGR +KV  VT+   A  S +   D D
Sbjct: 303 SETGRSKGYGFITFSDSECAKKALEQLNG-FELAGRPMKVGHVTERTDA-SSASSFLDSD 362

Query: 429 DDEGGGLALNAQSRALLMQKL-DRTGI--------ATSIAGSLG-APVLNGSAPNQRSTS 488
           + E  G+ L    R  LM +L + TG+        A  ++GSL    V   S      T 
Sbjct: 363 ELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTR 422

Query: 489 LPVNGQA---AVAAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDV 548
           L    +A   A AA V P              ++C  L NMF+P TE    +D EIK+DV
Sbjct: 423 LSQQTEASALAAAASVQPL------------ATQCFQLSNMFNPQTEEEVGWDTEIKDDV 482

Query: 549 EEECSKYGHVKHIYVDKNSA-GCVYLQYDTVEAAINAQRAMHLRWFAGRQISVLFMQPQV 594
            EEC+K+G V HIYVDKNSA G VY++  ++ AAI A  A+H RWFAG+ I+  ++    
Sbjct: 483 IEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPT 515

[Close]

BLAST of CSPI06G26910 vs. ExPASy Swiss-Prot
Match: Q8VH51 (RNA-binding protein 39 OS=Mus musculus OX=10090 GN=Rbm39 PE=1 SV=2)

HSP 1 Score: 208.0 bits (528), Expect = 3.0e-52
Identity = 217/545 (39.82%), Postives = 299/545 (54.86%), Query Frame = 0


Query: 69  EDRDHSGRARDRHRRDREE--ETDGGKERDKERNRTRERG-SSEKERDRDRDREERDRDR 128
           +D D        +++D  +    +G +ER K+R +++ R  S E++R + ++R +R RDR
Sbjct: 3   DDIDIEAMLEAPYKKDENKLNSANGHEERSKKRKKSKSRSRSHERKRSKSKER-KRSRDR 62

Query: 129 DRHKEKERERDKDRKDKERDRERHKEKDRERDKDRRDKEREKEKERERRDRERREREREE 188
           +R K K RER + R  KER R R + +DR      R      +     R +       + 
Sbjct: 63  ERKKSKSRERKRSR-SKERRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKL 122

Query: 189 ERSRRSRSRSVREREREVDVRESRRMKEKKDTTEPEADPERDQRTVFAYQMPLKATERDV 248
            R RRSRS+S   +++         ++E  D   PE   ERD RTVF  Q+  +   RD+
Sbjct: 123 SR-RRSRSKSPFRKDKS-------PVREPIDNLTPE---ERDARTVFCMQLAARIRPRDL 182

Query: 249 YEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLGQPVMVKPSE 308
            EFFS  GKVRDVR+I DRNSRRSKG+ YVEF D  SVP+AI L+GQ +LG P++V+ S+
Sbjct: 183 EEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQ 242

Query: 309 AEKN--LVQSNTTGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVELVQLPLD 368
           AEKN     +N      AGP      +LYVG+LHFN+TE  LR IFE FG +E +QL +D
Sbjct: 243 AEKNRAAAMANNLQKGSAGP-----MRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMD 302

Query: 369 LESGHCKGFGFVQFAHLEHA-KAAQSLNGKLEIAGRTIKVSSVTDHIGAQESVAKSNDLD 428
            E+G  KG+GF+ F+  E A KA + LNG  E+AGR +KV  VT+   A  S +   D D
Sbjct: 303 SETGRSKGYGFITFSDSECAKKALEQLNG-FELAGRPMKVGHVTERTDA-SSASSFLDSD 362

Query: 429 DDEGGGLALNAQSRALLMQKL-DRTGI--------ATSIAGSLG-APVLNGSAPNQRSTS 488
           + E  G+ L    R  LM +L + TG+        A  ++GSL    V   S      T 
Sbjct: 363 ELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTR 422

Query: 489 LPVNGQA---AVAAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDV 548
           L    +A   A AA V P              ++C  L NMF+P TE    +D EIK+DV
Sbjct: 423 LSQQTEASALAAAASVQPL------------ATQCFQLSNMFNPQTEEEVGWDTEIKDDV 482

Query: 549 EEECSKYGHVKHIYVDKNSA-GCVYLQYDTVEAAINAQRAMHLRWFAGRQISVLFMQPQV 594
            EEC+K+G V HIYVDKNSA G VY++  ++ AAI A  A+H RWFAG+ I+  ++    
Sbjct: 483 IEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPT 515

[Close]

BLAST of CSPI06G26910 vs. ExPASy Swiss-Prot
Match: O13845 (RNA-binding protein rsd1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rsd1 PE=1 SV=2)

HSP 1 Score: 128.6 bits (322), Expect = 2.3e-28
Identity = 161/531 (30.32%), Postives = 251/531 (47.27%), Query Frame = 0


Query: 80  RHRRDREEETDGGKERDKERNRTRERGSSEKERDRDRDREERDRDRDRHKEKERERDKDR 139
           R  +   +  D G   D   N +  R      R      +   R    H   +  + +  
Sbjct: 86  RSSKQSFQREDSGYNDDVVTNSSSHRTPRHHRRSYSPRSDYGSRSPSPHSSVDSHQSRS- 145

Query: 140 KDKERDRERHKEKDRERDKDRRDKEREKEKERERRDRERREREREEERSRRSRSRSVRER 199
             + RDR+R     R R    R + R  +  R      R  R R     R SRS    + 
Sbjct: 146 PVRSRDRDRSSRSSRSRHPSSRSRHRYDDYSRSPPYSSRHSRSRRRYEERSSRSSRAHDY 205

Query: 200 EREVDVRESRRMKEKK-------DTTEPEADPERDQRTVFAYQMPLKATERDVYEFFSKA 259
           + E D+R+  R  E+K       + +   ++ ERD+RTVF  Q+  + T R++Y+FF +A
Sbjct: 206 DYE-DLRDDDRSHERKRSRSRPRERSSKLSEEERDRRTVFVSQLANRLTSRELYDFFEQA 265

Query: 260 GKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQ 319
           G VRD +++ D+ S RSKGV YVEF    SV  AIALSG+ LLG PV+V+ +EAEKN   
Sbjct: 266 GPVRDAQIVRDKISGRSKGVAYVEFCHEDSVQAAIALSGKRLLGLPVIVQLTEAEKNRKA 325

Query: 320 SNTTGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVELVQLPLDLESGHCKGF 379
                 + A        +L V N+HFN+T+  ++ IFE FG +E V L  D +    KGF
Sbjct: 326 REAAELARAASAEIPFHRLCVSNIHFNLTDEDVKAIFEPFGDIEFVHLQRD-DQNRSKGF 385

Query: 380 GFVQFAH-LEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESVAKSNDLDDDEGGGLAL 439
           G++Q+ + +    A + +NG  ++AGR ++V    D    + + +     D+       L
Sbjct: 386 GYIQYRNPISARNALEKMNG-FDLAGRNMRVCLGNDKFTTETTSSMLKRFDE------TL 445

Query: 440 NAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSTSLPVNGQAAVAAPV-----L 499
             Q R+   Q+   +    S      AP+      ++  T   +  + A +  +     L
Sbjct: 446 ARQERSQPSQRNGGSSTYESQDYREAAPLSPTEEESRPITRDELMKKLARSEDISDNSKL 505

Query: 500 PANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEEC-SKYGHVKHIYVD 559
            +   PP+       S C LL+NMF+P+ ET+P++  E+++DV+EEC  KYG V HI V 
Sbjct: 506 VSEPEPPI------RSRCALLENMFNPAEETSPNWVQELEQDVKEECDEKYGKVVHIAVV 565

Query: 560 KNSAGCVYLQYDTVEAAINAQRAMHLRWFAGRQISVLFMQPQVYEAKFIGA 597
            N  G ++++++  + A  A   +H RWF GR I    +    Y  KF  A
Sbjct: 566 PNELGQIFVKFENADFAEKAITGLHQRWFGGRTIKASILPETDYYFKFPNA 600

[Close]

BLAST of CSPI06G26910 vs. ExPASy Swiss-Prot
Match: Q86U06 (Probable RNA-binding protein 23 OS=Homo sapiens OX=9606 GN=RBM23 PE=1 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 3.7e-26
Identity = 153/446 (34.30%), Postives = 231/446 (51.79%), Query Frame = 0


Query: 81  HRRDREEETDGGKERDKERNRTRERGSSEKERDRDR---DREERDRDRDRHKEKERERDK 140
           ++++ +E+     ++D   N T    +S  E        +  ++ R R  +K ++R+R +
Sbjct: 18  YKKEEDEQQRKEVKKDYPSNTTSSTSNSGNETSGSSTIGETSKKKRSRSHNKSRDRKRSR 77

Query: 141 DRKDKERDRERHKEKDRERDKDRRDKEREKEKER----ERRDRERREREREEERSRRSRS 200
            R   +RDR R +   R R   R+ + R +  +R    E R R+ R  +R   RS    +
Sbjct: 78  SR---DRDRYR-RRNSRSRSPGRQCRHRSRSWDRRHGSESRSRDHRREDRVHYRSPPLAT 137

Query: 201 RSVREREREVDVRESRRMKEKKDTTEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAG 260
                  +    RE   ++E  D   PE   ERD RTVF  Q+  +   RD+ +FFS  G
Sbjct: 138 GYRYGHSKSPHFREKSPVREPVDNLSPE---ERDARTVFCMQLAARIRPRDLEDFFSAVG 197

Query: 261 KVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LV 320
           KVRDVR+I DRNSRRSKG+ YVEF +  SVP+AI L+GQ LLG P++V+ S+AEKN    
Sbjct: 198 KVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAA 257

Query: 321 QSNTTGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVELVQLPLDLESGHCKG 380
            +N       GP      +LYVG+LHFN+TE  LR IFE FG ++ + L  D ++G  KG
Sbjct: 258 MANNLQKGNGGP-----MRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKG 317

Query: 381 FGFVQFAHLEHA-KAAQSLNGKLEIAGRTIKVSSVTDHI-GAQESVAKSNDLDDDEGGGL 440
           +GF+ F+  E A +A + LNG  E+AGR ++V  VT+ + G  +      D + D G   
Sbjct: 318 YGFITFSDSECARRALEQLNG-FELAGRPMRVGHVTERLDGGTDITFPDGDQELDLG--- 377

Query: 441 ALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSTSLPVNGQAAVAAPVLPAN 500
             +A  R  LM KL     A      L +     +A   ++ +L +NG   + A + PA 
Sbjct: 378 --SAGGRFQLMAKL-----AEGAGIQLPSTAAAAAAAAAQAAALQLNGAVPLGA-LNPAA 437

Query: 501 FTPPVLQSVGSPSECLLLKNMFDPST 516
            T  +  ++   S+C  L ++F P T
Sbjct: 438 LT-ALSPALNLASQCFQLSSLFTPQT 438

[Close]

BLAST of CSPI06G26910 vs. ExPASy TrEMBL
Match: A0A0A0KFB3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G486730 PE=4 SV=1)

HSP 1 Score: 1042.3 bits (2694), Expect = 7.6e-301
Identity = 592/600 (98.67%), Postives = 593/600 (98.83%), Query Frame = 0


Query: 1   MDFDEYDYLEKAVEEQDDRETKKPKRSDSERNEKSTRKREVDEEAGSGGREDEEVKVKRS 60
           MDFDEYDYLEKAVEEQDDRETKKPKRSDSERNEKSTRKREVDEEAGSGGREDEEVKVKRS
Sbjct: 1   MDFDEYDYLEKAVEEQDDRETKKPKRSDSERNEKSTRKREVDEEAGSGGREDEEVKVKRS 60

Query: 61  RSEHENGKEDRDHSGRARDRHRRDREEETDGGKERDKERNRTRERGSSEKERDRDRDREE 120
           RSEHENGKEDRDHSGRARDRHRRDREEETDGGKERDKERNRTRERGSSEKER+RDRDREE
Sbjct: 61  RSEHENGKEDRDHSGRARDRHRRDREEETDGGKERDKERNRTRERGSSEKERERDRDREE 120

Query: 121 RDRDRDRHKEKERERDKDRKDKERDRERHKEKDRERDKDRRDKER----EKEKERERRDR 180
             RDRDRHKEKERERDKDRKDKERDRERHKEKDRERDKDRRDKER    EKEKERERRDR
Sbjct: 121 --RDRDRHKEKERERDKDRKDKERDRERHKEKDRERDKDRRDKEREREKEKEKERERRDR 180

Query: 181 ERREREREEERSRRSRSRSVREREREVDVRESRRMKEKKDTTEPEADPERDQRTVFAYQM 240
           ERREREREEERSRRSRSRSVREREREVDVRESRRMKEKKDTTEPEADPERDQRTVFAYQM
Sbjct: 181 ERREREREEERSRRSRSRSVREREREVDVRESRRMKEKKDTTEPEADPERDQRTVFAYQM 240

Query: 241 PLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLG 300
           PLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLG
Sbjct: 241 PLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLG 300

Query: 301 QPVMVKPSEAEKNLVQSNTTGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVE 360
           QPVMVKPSEAEKNLVQSNTTGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVE
Sbjct: 301 QPVMVKPSEAEKNLVQSNTTGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVE 360

Query: 361 LVQLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESVA 420
           LVQLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESVA
Sbjct: 361 LVQLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESVA 420

Query: 421 KSNDLDDDEGGGLALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSTSLPVN 480
           KSNDLDDDEGGGLALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSTSLPVN
Sbjct: 421 KSNDLDDDEGGGLALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSTSLPVN 480

Query: 481 GQAAVAAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECSKY 540
           GQAAVAAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECSKY
Sbjct: 481 GQAAVAAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECSKY 540

Query: 541 GHVKHIYVDKNSAGCVYLQYDTVEAAINAQRAMHLRWFAGRQISVLFMQPQVYEAKFIGA 597
           G VKHIYVDKNSAGCVYLQYDTVEAAINAQRAMHLRWFAGRQISVLFMQPQVYEAKFIGA
Sbjct: 541 GRVKHIYVDKNSAGCVYLQYDTVEAAINAQRAMHLRWFAGRQISVLFMQPQVYEAKFIGA 598

[Close]

BLAST of CSPI06G26910 vs. ExPASy TrEMBL
Match: A0A1S3B2E3 (RNA-binding protein 39 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103485239 PE=4 SV=1)

HSP 1 Score: 1040.4 bits (2689), Expect = 2.9e-300
Identity = 589/600 (98.17%), Postives = 593/600 (98.83%), Query Frame = 0


Query: 1   MDFDEYDYLEKAVEEQDDRETKKPKRSDSERNEKSTRKREVDEEAGSGGREDEEVKVKRS 60
           MDFDEYDYLEKAVEEQDDRETKKPKRS+SERNEKSTRKREVDEEAGSGGREDEEVKVKRS
Sbjct: 1   MDFDEYDYLEKAVEEQDDRETKKPKRSESERNEKSTRKREVDEEAGSGGREDEEVKVKRS 60

Query: 61  RSEHENGKEDRDHSGRARDRHRRDREEETDGGKERDKERNRTRERGSSEKERDRDRDREE 120
           RSEHENGKEDRDHSGRARDRHRRDREEETDGGKERDKERNRTRERGSSEKERDRDRDREE
Sbjct: 61  RSEHENGKEDRDHSGRARDRHRRDREEETDGGKERDKERNRTRERGSSEKERDRDRDREE 120

Query: 121 RDRDRDRHKEKERERDKDRKDKERDRERHKEKDRERDKDRRDK----EREKEKERERRDR 180
             RDRDRHKEKERERDKDRKDKERDRERHKEKDRERDKDRRDK    EREKEKERERRDR
Sbjct: 121 --RDRDRHKEKERERDKDRKDKERDRERHKEKDRERDKDRRDKEKEREREKEKERERRDR 180

Query: 181 ERREREREEERSRRSRSRSVREREREVDVRESRRMKEKKDTTEPEADPERDQRTVFAYQM 240
           ERREREREEERSRRSRSRSVREREREVDVRESRRMKEKKDT EPEADPERDQRTVFAYQM
Sbjct: 181 ERREREREEERSRRSRSRSVREREREVDVRESRRMKEKKDTAEPEADPERDQRTVFAYQM 240

Query: 241 PLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLG 300
           PLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLG
Sbjct: 241 PLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLG 300

Query: 301 QPVMVKPSEAEKNLVQSNTTGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVE 360
           QPVMVKPSEAEKNLVQSNT+GASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVE
Sbjct: 301 QPVMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVE 360

Query: 361 LVQLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESVA 420
           LVQLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESVA
Sbjct: 361 LVQLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESVA 420

Query: 421 KSNDLDDDEGGGLALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSTSLPVN 480
           KSNDLDDDEGGGLALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSTSLP+N
Sbjct: 421 KSNDLDDDEGGGLALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSTSLPLN 480

Query: 481 GQAAVAAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECSKY 540
           GQAAVAAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECSKY
Sbjct: 481 GQAAVAAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECSKY 540

Query: 541 GHVKHIYVDKNSAGCVYLQYDTVEAAINAQRAMHLRWFAGRQISVLFMQPQVYEAKFIGA 597
           GHVKHIYVDKNSAGCVYLQYDTVEAA+NAQRAMHLRWFAGRQISVLFMQPQVYEAKFIGA
Sbjct: 541 GHVKHIYVDKNSAGCVYLQYDTVEAAVNAQRAMHLRWFAGRQISVLFMQPQVYEAKFIGA 598

[Close]

BLAST of CSPI06G26910 vs. ExPASy TrEMBL
Match: A0A1S3B1Y4 (RNA-binding protein 39 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103485239 PE=4 SV=1)

HSP 1 Score: 1035.4 bits (2676), Expect = 9.2e-299
Identity = 589/602 (97.84%), Postives = 593/602 (98.50%), Query Frame = 0


Query: 1   MDFDEYDYLEKAVEEQDDRETKKPKRSDSERNEKSTRKREVDEEAGSGGREDEEVKVKRS 60
           MDFDEYDYLEKAVEEQDDRETKKPKRS+SERNEKSTRKREVDEEAGSGGREDEEVKVKRS
Sbjct: 1   MDFDEYDYLEKAVEEQDDRETKKPKRSESERNEKSTRKREVDEEAGSGGREDEEVKVKRS 60

Query: 61  RSEHENGKEDRDHSGRARDRHRRDREEETDGGKERDKERNRTRERGSSEKERDRDRDREE 120
           RSEHENGKEDRDHSGRARDRHRRDREEETDGGKERDKERNRTRERGSSEKERDRDRDREE
Sbjct: 61  RSEHENGKEDRDHSGRARDRHRRDREEETDGGKERDKERNRTRERGSSEKERDRDRDREE 120

Query: 121 RDRDRDRHKEKERERDKDRKDKERDRERHKEKDRERDKDRRDK----EREKEKERERRDR 180
             RDRDRHKEKERERDKDRKDKERDRERHKEKDRERDKDRRDK    EREKEKERERRDR
Sbjct: 121 --RDRDRHKEKERERDKDRKDKERDRERHKEKDRERDKDRRDKEKEREREKEKERERRDR 180

Query: 181 ERREREREEERSRRSRSRSVREREREVDVRESRRMKEKKDTTEPEADPERDQRTVFAYQM 240
           ERREREREEERSRRSRSRSVREREREVDVRESRRMKEKKDT EPEADPERDQRTVFAYQM
Sbjct: 181 ERREREREEERSRRSRSRSVREREREVDVRESRRMKEKKDTAEPEADPERDQRTVFAYQM 240

Query: 241 PLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLG 300
           PLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLG
Sbjct: 241 PLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLG 300

Query: 301 QPVMVKPSEAEKNLVQSNTTGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVE 360
           QPVMVKPSEAEKNLVQSNT+GASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVE
Sbjct: 301 QPVMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVE 360

Query: 361 LVQLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESVA 420
           LVQLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESVA
Sbjct: 361 LVQLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESVA 420

Query: 421 KSNDLDDDEGGGL--ALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSTSLP 480
           KSNDLDDDEGGGL  ALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSTSLP
Sbjct: 421 KSNDLDDDEGGGLVGALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSTSLP 480

Query: 481 VNGQAAVAAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECS 540
           +NGQAAVAAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECS
Sbjct: 481 LNGQAAVAAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECS 540

Query: 541 KYGHVKHIYVDKNSAGCVYLQYDTVEAAINAQRAMHLRWFAGRQISVLFMQPQVYEAKFI 597
           KYGHVKHIYVDKNSAGCVYLQYDTVEAA+NAQRAMHLRWFAGRQISVLFMQPQVYEAKFI
Sbjct: 541 KYGHVKHIYVDKNSAGCVYLQYDTVEAAVNAQRAMHLRWFAGRQISVLFMQPQVYEAKFI 600

[Close]

BLAST of CSPI06G26910 vs. ExPASy TrEMBL
Match: A0A6J1GD19 (RNA-binding protein 39-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111453086 PE=4 SV=1)

HSP 1 Score: 1002.3 bits (2590), Expect = 8.7e-289
Identity = 566/600 (94.33%), Postives = 588/600 (98.00%), Query Frame = 0


Query: 1   MDFDEYDYLEKAVEEQDDRETKKPKRSDSERNEKSTRKREVDEEAGSGGREDEEVKVKRS 60
           MDFDEYDYLEKAVE+QDD+ETKK K+S+SERNEKS+RKREVDEEAGSGGR DEE+KVKRS
Sbjct: 1   MDFDEYDYLEKAVEDQDDKETKKAKKSESERNEKSSRKREVDEEAGSGGRVDEELKVKRS 60

Query: 61  RSEHENGKEDRDHSGRARDRHRRDREEETDGGKERDKERNRTRERGSSEKERDRDRDREE 120
           +SEHENGKEDRDHSGRARDRHRRDREEETDG KERD+ERNRTR+RGSSEKERDRDRDREE
Sbjct: 61  KSEHENGKEDRDHSGRARDRHRRDREEETDGVKERDRERNRTRDRGSSEKERDRDRDREE 120

Query: 121 RDRDR--DRHKEKERERDKDRKDKERDRERHKEKDRERDKDRRDK--EREKEKERERRDR 180
           RDR+R  ++ KEKERERDKDR+DKERDRERHKEKDRERDKDRRDK  EREKEKERERR+R
Sbjct: 121 RDRERHKEKEKEKERERDKDRRDKERDRERHKEKDRERDKDRRDKEREREKEKERERRER 180

Query: 181 ERREREREEERSRRSRSRSVREREREVDVRESRRMKEKKDTTEPEADPERDQRTVFAYQM 240
           E+REREREEERSRRSRSRSVRE+EREVDVRE+RRMKEKKD  EPEADPERDQRTVFAYQM
Sbjct: 181 EKREREREEERSRRSRSRSVREKEREVDVRENRRMKEKKDMVEPEADPERDQRTVFAYQM 240

Query: 241 PLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLG 300
           PLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLL G
Sbjct: 241 PLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLFG 300

Query: 301 QPVMVKPSEAEKNLVQSNTTGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVE 360
           QPVMVKPSEAEKNLVQSNT+GASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVE
Sbjct: 301 QPVMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVE 360

Query: 361 LVQLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESVA 420
           LVQLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQE+VA
Sbjct: 361 LVQLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQENVA 420

Query: 421 KSNDLDDDEGGGLALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSTSLPVN 480
           KSNDLDDDEGGGLALNAQSRALLMQKLDRTGIATSIAGSLGAPVLN SAPNQR+TSLP+N
Sbjct: 421 KSNDLDDDEGGGLALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNASAPNQRATSLPLN 480

Query: 481 GQAAVAAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECSKY 540
           GQAAVAAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFD+EIKEDVEEECSKY
Sbjct: 481 GQAAVAAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDLEIKEDVEEECSKY 540

Query: 541 GHVKHIYVDKNSAGCVYLQYDTVEAAINAQRAMHLRWFAGRQISVLFMQPQVYEAKFIGA 597
           GHVKHIYVDKNSAGCVYLQYDTVEAAINAQRAMHLRWFAGRQISVLFMQPQVYEAKFIGA
Sbjct: 541 GHVKHIYVDKNSAGCVYLQYDTVEAAINAQRAMHLRWFAGRQISVLFMQPQVYEAKFIGA 600

[Close]

BLAST of CSPI06G26910 vs. ExPASy TrEMBL
Match: A0A6J1ISX3 (RNA-binding protein 39-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111478129 PE=4 SV=1)

HSP 1 Score: 991.5 bits (2562), Expect = 1.5e-285
Identity = 561/598 (93.81%), Postives = 580/598 (96.99%), Query Frame = 0


Query: 1   MDFDEYDYLEKAVEEQDDRETKKPKRSDSERNEKSTRKREVDEEAGSGGREDEEVKVKRS 60
           MDFDEYDYLEKAVE+QDD+ETKK K+S+SERNEKS+RKREVDEEAGSGGR DEE+KVKRS
Sbjct: 1   MDFDEYDYLEKAVEDQDDKETKKAKKSESERNEKSSRKREVDEEAGSGGRVDEELKVKRS 60

Query: 61  RSEHENGKEDRDHSGRARDRHRRDREEETDGGKERDKERNRTRERGSSEKERDRDRDREE 120
           +SEHENGKEDRDHSGRARDRHRRDREEETDG KERD+ERNRTR+RGSSEKERDRDRDRE 
Sbjct: 61  KSEHENGKEDRDHSGRARDRHRRDREEETDGVKERDRERNRTRDRGSSEKERDRDRDRE- 120

Query: 121 RDRDRDRHKEKERERDKDRKDKERDRERHKEKDRERDKDRRDK--EREKEKERERRDRER 180
               R + KEKERERDKDR+DKERDRERHKEKDRERDKDRRDK  EREKEKERERR+RE+
Sbjct: 121 ----RHKEKEKERERDKDRRDKERDRERHKEKDRERDKDRRDKEREREKEKERERREREK 180

Query: 181 REREREEERSRRSRSRSVREREREVDVRESRRMKEKKDTTEPEADPERDQRTVFAYQMPL 240
           REREREEERSRRSRSRSVRE+EREVDVRE+RRMKEKKD  EPEADPERDQRTVFAYQMPL
Sbjct: 181 REREREEERSRRSRSRSVREKEREVDVRENRRMKEKKDMVEPEADPERDQRTVFAYQMPL 240

Query: 241 KATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLGQP 300
           KATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLL GQP
Sbjct: 241 KATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLFGQP 300

Query: 301 VMVKPSEAEKNLVQSNTTGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVELV 360
           VMVKPSEAEKNLVQSNT+GASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVELV
Sbjct: 301 VMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVELV 360

Query: 361 QLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESVAKS 420
           QLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQE+VAKS
Sbjct: 361 QLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQENVAKS 420

Query: 421 NDLDDDEGGGLALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSTSLPVNGQ 480
           NDLDDDEGGGLALNAQSRALLMQKLDRTGIATSIAGSLGAPVLN SAPNQR+TSLP NGQ
Sbjct: 421 NDLDDDEGGGLALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNASAPNQRATSLPQNGQ 480

Query: 481 AAVAAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECSKYGH 540
           AAVAAPVLPANFTPPVLQSVGSPSECLLLKNMFDPS ETAPDFD+EIKEDVEEECSKYGH
Sbjct: 481 AAVAAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSMETAPDFDLEIKEDVEEECSKYGH 540

Query: 541 VKHIYVDKNSAGCVYLQYDTVEAAINAQRAMHLRWFAGRQISVLFMQPQVYEAKFIGA 597
           VKHIYVDKNSAGCVYLQYDTVEAAINAQRAMHLRWFAGRQISVLFMQPQVYEAKFIGA
Sbjct: 541 VKHIYVDKNSAGCVYLQYDTVEAAINAQRAMHLRWFAGRQISVLFMQPQVYEAKFIGA 593

[Close]

BLAST of CSPI06G26910 vs. NCBI nr
Match: XP_004141977.1 (RNA-binding protein 39 isoform X3 [Cucumis sativus] >KGN48400.1 hypothetical protein Csa_003011 [Cucumis sativus])

HSP 1 Score: 1042.3 bits (2694), Expect = 1.6e-300
Identity = 592/600 (98.67%), Postives = 593/600 (98.83%), Query Frame = 0


Query: 1   MDFDEYDYLEKAVEEQDDRETKKPKRSDSERNEKSTRKREVDEEAGSGGREDEEVKVKRS 60
           MDFDEYDYLEKAVEEQDDRETKKPKRSDSERNEKSTRKREVDEEAGSGGREDEEVKVKRS
Sbjct: 1   MDFDEYDYLEKAVEEQDDRETKKPKRSDSERNEKSTRKREVDEEAGSGGREDEEVKVKRS 60

Query: 61  RSEHENGKEDRDHSGRARDRHRRDREEETDGGKERDKERNRTRERGSSEKERDRDRDREE 120
           RSEHENGKEDRDHSGRARDRHRRDREEETDGGKERDKERNRTRERGSSEKER+RDRDREE
Sbjct: 61  RSEHENGKEDRDHSGRARDRHRRDREEETDGGKERDKERNRTRERGSSEKERERDRDREE 120

Query: 121 RDRDRDRHKEKERERDKDRKDKERDRERHKEKDRERDKDRRDKER----EKEKERERRDR 180
             RDRDRHKEKERERDKDRKDKERDRERHKEKDRERDKDRRDKER    EKEKERERRDR
Sbjct: 121 --RDRDRHKEKERERDKDRKDKERDRERHKEKDRERDKDRRDKEREREKEKEKERERRDR 180

Query: 181 ERREREREEERSRRSRSRSVREREREVDVRESRRMKEKKDTTEPEADPERDQRTVFAYQM 240
           ERREREREEERSRRSRSRSVREREREVDVRESRRMKEKKDTTEPEADPERDQRTVFAYQM
Sbjct: 181 ERREREREEERSRRSRSRSVREREREVDVRESRRMKEKKDTTEPEADPERDQRTVFAYQM 240

Query: 241 PLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLG 300
           PLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLG
Sbjct: 241 PLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLG 300

Query: 301 QPVMVKPSEAEKNLVQSNTTGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVE 360
           QPVMVKPSEAEKNLVQSNTTGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVE
Sbjct: 301 QPVMVKPSEAEKNLVQSNTTGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVE 360

Query: 361 LVQLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESVA 420
           LVQLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESVA
Sbjct: 361 LVQLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESVA 420

Query: 421 KSNDLDDDEGGGLALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSTSLPVN 480
           KSNDLDDDEGGGLALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSTSLPVN
Sbjct: 421 KSNDLDDDEGGGLALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSTSLPVN 480

Query: 481 GQAAVAAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECSKY 540
           GQAAVAAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECSKY
Sbjct: 481 GQAAVAAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECSKY 540

Query: 541 GHVKHIYVDKNSAGCVYLQYDTVEAAINAQRAMHLRWFAGRQISVLFMQPQVYEAKFIGA 597
           G VKHIYVDKNSAGCVYLQYDTVEAAINAQRAMHLRWFAGRQISVLFMQPQVYEAKFIGA
Sbjct: 541 GRVKHIYVDKNSAGCVYLQYDTVEAAINAQRAMHLRWFAGRQISVLFMQPQVYEAKFIGA 598

[Close]

BLAST of CSPI06G26910 vs. NCBI nr
Match: XP_008440993.1 (PREDICTED: RNA-binding protein 39 isoform X4 [Cucumis melo])

HSP 1 Score: 1040.4 bits (2689), Expect = 5.9e-300
Identity = 589/600 (98.17%), Postives = 593/600 (98.83%), Query Frame = 0


Query: 1   MDFDEYDYLEKAVEEQDDRETKKPKRSDSERNEKSTRKREVDEEAGSGGREDEEVKVKRS 60
           MDFDEYDYLEKAVEEQDDRETKKPKRS+SERNEKSTRKREVDEEAGSGGREDEEVKVKRS
Sbjct: 1   MDFDEYDYLEKAVEEQDDRETKKPKRSESERNEKSTRKREVDEEAGSGGREDEEVKVKRS 60

Query: 61  RSEHENGKEDRDHSGRARDRHRRDREEETDGGKERDKERNRTRERGSSEKERDRDRDREE 120
           RSEHENGKEDRDHSGRARDRHRRDREEETDGGKERDKERNRTRERGSSEKERDRDRDREE
Sbjct: 61  RSEHENGKEDRDHSGRARDRHRRDREEETDGGKERDKERNRTRERGSSEKERDRDRDREE 120

Query: 121 RDRDRDRHKEKERERDKDRKDKERDRERHKEKDRERDKDRRDK----EREKEKERERRDR 180
             RDRDRHKEKERERDKDRKDKERDRERHKEKDRERDKDRRDK    EREKEKERERRDR
Sbjct: 121 --RDRDRHKEKERERDKDRKDKERDRERHKEKDRERDKDRRDKEKEREREKEKERERRDR 180

Query: 181 ERREREREEERSRRSRSRSVREREREVDVRESRRMKEKKDTTEPEADPERDQRTVFAYQM 240
           ERREREREEERSRRSRSRSVREREREVDVRESRRMKEKKDT EPEADPERDQRTVFAYQM
Sbjct: 181 ERREREREEERSRRSRSRSVREREREVDVRESRRMKEKKDTAEPEADPERDQRTVFAYQM 240

Query: 241 PLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLG 300
           PLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLG
Sbjct: 241 PLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLG 300

Query: 301 QPVMVKPSEAEKNLVQSNTTGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVE 360
           QPVMVKPSEAEKNLVQSNT+GASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVE
Sbjct: 301 QPVMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVE 360

Query: 361 LVQLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESVA 420
           LVQLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESVA
Sbjct: 361 LVQLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESVA 420

Query: 421 KSNDLDDDEGGGLALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSTSLPVN 480
           KSNDLDDDEGGGLALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSTSLP+N
Sbjct: 421 KSNDLDDDEGGGLALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSTSLPLN 480

Query: 481 GQAAVAAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECSKY 540
           GQAAVAAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECSKY
Sbjct: 481 GQAAVAAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECSKY 540

Query: 541 GHVKHIYVDKNSAGCVYLQYDTVEAAINAQRAMHLRWFAGRQISVLFMQPQVYEAKFIGA 597
           GHVKHIYVDKNSAGCVYLQYDTVEAA+NAQRAMHLRWFAGRQISVLFMQPQVYEAKFIGA
Sbjct: 541 GHVKHIYVDKNSAGCVYLQYDTVEAAVNAQRAMHLRWFAGRQISVLFMQPQVYEAKFIGA 598

[Close]

BLAST of CSPI06G26910 vs. NCBI nr
Match: XP_011657782.1 (RNA-binding protein 39 isoform X1 [Cucumis sativus])

HSP 1 Score: 1037.3 bits (2681), Expect = 5.0e-299
Identity = 592/602 (98.34%), Postives = 593/602 (98.50%), Query Frame = 0


Query: 1   MDFDEYDYLEKAVEEQDDRETKKPKRSDSERNEKSTRKREVDEEAGSGGREDEEVKVKRS 60
           MDFDEYDYLEKAVEEQDDRETKKPKRSDSERNEKSTRKREVDEEAGSGGREDEEVKVKRS
Sbjct: 1   MDFDEYDYLEKAVEEQDDRETKKPKRSDSERNEKSTRKREVDEEAGSGGREDEEVKVKRS 60

Query: 61  RSEHENGKEDRDHSGRARDRHRRDREEETDGGKERDKERNRTRERGSSEKERDRDRDREE 120
           RSEHENGKEDRDHSGRARDRHRRDREEETDGGKERDKERNRTRERGSSEKER+RDRDREE
Sbjct: 61  RSEHENGKEDRDHSGRARDRHRRDREEETDGGKERDKERNRTRERGSSEKERERDRDREE 120

Query: 121 RDRDRDRHKEKERERDKDRKDKERDRERHKEKDRERDKDRRDKER----EKEKERERRDR 180
             RDRDRHKEKERERDKDRKDKERDRERHKEKDRERDKDRRDKER    EKEKERERRDR
Sbjct: 121 --RDRDRHKEKERERDKDRKDKERDRERHKEKDRERDKDRRDKEREREKEKEKERERRDR 180

Query: 181 ERREREREEERSRRSRSRSVREREREVDVRESRRMKEKKDTTEPEADPERDQRTVFAYQM 240
           ERREREREEERSRRSRSRSVREREREVDVRESRRMKEKKDTTEPEADPERDQRTVFAYQM
Sbjct: 181 ERREREREEERSRRSRSRSVREREREVDVRESRRMKEKKDTTEPEADPERDQRTVFAYQM 240

Query: 241 PLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLG 300
           PLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLG
Sbjct: 241 PLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLG 300

Query: 301 QPVMVKPSEAEKNLVQSNTTGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVE 360
           QPVMVKPSEAEKNLVQSNTTGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVE
Sbjct: 301 QPVMVKPSEAEKNLVQSNTTGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVE 360

Query: 361 LVQLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESVA 420
           LVQLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESVA
Sbjct: 361 LVQLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESVA 420

Query: 421 KSNDLDDDEGGGL--ALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSTSLP 480
           KSNDLDDDEGGGL  ALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSTSLP
Sbjct: 421 KSNDLDDDEGGGLVGALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSTSLP 480

Query: 481 VNGQAAVAAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECS 540
           VNGQAAVAAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECS
Sbjct: 481 VNGQAAVAAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECS 540

Query: 541 KYGHVKHIYVDKNSAGCVYLQYDTVEAAINAQRAMHLRWFAGRQISVLFMQPQVYEAKFI 597
           KYG VKHIYVDKNSAGCVYLQYDTVEAAINAQRAMHLRWFAGRQISVLFMQPQVYEAKFI
Sbjct: 541 KYGRVKHIYVDKNSAGCVYLQYDTVEAAINAQRAMHLRWFAGRQISVLFMQPQVYEAKFI 600

[Close]

BLAST of CSPI06G26910 vs. NCBI nr
Match: XP_008440991.1 (PREDICTED: RNA-binding protein 39 isoform X2 [Cucumis melo])

HSP 1 Score: 1035.4 bits (2676), Expect = 1.9e-298
Identity = 589/602 (97.84%), Postives = 593/602 (98.50%), Query Frame = 0


Query: 1   MDFDEYDYLEKAVEEQDDRETKKPKRSDSERNEKSTRKREVDEEAGSGGREDEEVKVKRS 60
           MDFDEYDYLEKAVEEQDDRETKKPKRS+SERNEKSTRKREVDEEAGSGGREDEEVKVKRS
Sbjct: 1   MDFDEYDYLEKAVEEQDDRETKKPKRSESERNEKSTRKREVDEEAGSGGREDEEVKVKRS 60

Query: 61  RSEHENGKEDRDHSGRARDRHRRDREEETDGGKERDKERNRTRERGSSEKERDRDRDREE 120
           RSEHENGKEDRDHSGRARDRHRRDREEETDGGKERDKERNRTRERGSSEKERDRDRDREE
Sbjct: 61  RSEHENGKEDRDHSGRARDRHRRDREEETDGGKERDKERNRTRERGSSEKERDRDRDREE 120

Query: 121 RDRDRDRHKEKERERDKDRKDKERDRERHKEKDRERDKDRRDK----EREKEKERERRDR 180
             RDRDRHKEKERERDKDRKDKERDRERHKEKDRERDKDRRDK    EREKEKERERRDR
Sbjct: 121 --RDRDRHKEKERERDKDRKDKERDRERHKEKDRERDKDRRDKEKEREREKEKERERRDR 180

Query: 181 ERREREREEERSRRSRSRSVREREREVDVRESRRMKEKKDTTEPEADPERDQRTVFAYQM 240
           ERREREREEERSRRSRSRSVREREREVDVRESRRMKEKKDT EPEADPERDQRTVFAYQM
Sbjct: 181 ERREREREEERSRRSRSRSVREREREVDVRESRRMKEKKDTAEPEADPERDQRTVFAYQM 240

Query: 241 PLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLG 300
           PLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLG
Sbjct: 241 PLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLG 300

Query: 301 QPVMVKPSEAEKNLVQSNTTGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVE 360
           QPVMVKPSEAEKNLVQSNT+GASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVE
Sbjct: 301 QPVMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVE 360

Query: 361 LVQLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESVA 420
           LVQLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESVA
Sbjct: 361 LVQLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESVA 420

Query: 421 KSNDLDDDEGGGL--ALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSTSLP 480
           KSNDLDDDEGGGL  ALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSTSLP
Sbjct: 421 KSNDLDDDEGGGLVGALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSTSLP 480

Query: 481 VNGQAAVAAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECS 540
           +NGQAAVAAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECS
Sbjct: 481 LNGQAAVAAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECS 540

Query: 541 KYGHVKHIYVDKNSAGCVYLQYDTVEAAINAQRAMHLRWFAGRQISVLFMQPQVYEAKFI 597
           KYGHVKHIYVDKNSAGCVYLQYDTVEAA+NAQRAMHLRWFAGRQISVLFMQPQVYEAKFI
Sbjct: 541 KYGHVKHIYVDKNSAGCVYLQYDTVEAAVNAQRAMHLRWFAGRQISVLFMQPQVYEAKFI 600

[Close]

BLAST of CSPI06G26910 vs. NCBI nr
Match: XP_038881757.1 (RNA-binding protein 39 isoform X2 [Benincasa hispida])

HSP 1 Score: 1018.8 bits (2633), Expect = 1.8e-293
Identity = 575/598 (96.15%), Postives = 588/598 (98.33%), Query Frame = 0


Query: 1   MDFDEYDYLEKAVEEQDDRETKKPKRSDSERNEKSTRKREVDEEAGSGGREDEEVKVKRS 60
           MDFDEYDYLEKAVEEQDDRETKKPK+S+SERNEKS+RKREVDEEAGSGGREDEEVKVKRS
Sbjct: 1   MDFDEYDYLEKAVEEQDDRETKKPKKSESERNEKSSRKREVDEEAGSGGREDEEVKVKRS 60

Query: 61  RSEHENGKEDRDHSGRARDRHRRDREEETDGGKERDKERNRTRERGSSEKERDRDRDREE 120
           RSEHENGKED+DHSGR RDRHRRDREEE DGGKERD+ERNRTRERGSSEKERDRDRDREE
Sbjct: 61  RSEHENGKEDKDHSGRGRDRHRRDREEEADGGKERDRERNRTRERGSSEKERDRDRDREE 120

Query: 121 RDRDRDRHKEKERERDKDRKDKERDRERHKEKDRERDKDR--RDKEREKEKERERRDRER 180
             RDRDRHKEKERERDKDR+DK+RDRERHKEKDRERDKDR  RD+EREKEKERERR+RE+
Sbjct: 121 --RDRDRHKEKERERDKDRRDKDRDRERHKEKDRERDKDRRDRDREREKEKERERREREK 180

Query: 181 REREREEERSRRSRSRSVREREREVDVRESRRMKEKKDTTEPEADPERDQRTVFAYQMPL 240
           REREREEERSRRSRSRSVREREREVDVRE+RRMKEKKD  EPEADPERDQRTVFAYQMPL
Sbjct: 181 REREREEERSRRSRSRSVREREREVDVRENRRMKEKKDMVEPEADPERDQRTVFAYQMPL 240

Query: 241 KATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLGQP 300
           KATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLGQP
Sbjct: 241 KATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLGQP 300

Query: 301 VMVKPSEAEKNLVQSNTTGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVELV 360
           VMVKPSEAEKNLVQSNT+GASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVELV
Sbjct: 301 VMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVELV 360

Query: 361 QLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESVAKS 420
           QLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESVAKS
Sbjct: 361 QLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESVAKS 420

Query: 421 NDLDDDEGGGLALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSTSLPVNGQ 480
           NDLDDDEGGGLALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSTSLP+NGQ
Sbjct: 421 NDLDDDEGGGLALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSTSLPLNGQ 480

Query: 481 AAVAAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECSKYGH 540
            AVAAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECSKYG 
Sbjct: 481 VAVAAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECSKYGR 540

Query: 541 VKHIYVDKNSAGCVYLQYDTVEAAINAQRAMHLRWFAGRQISVLFMQPQVYEAKFIGA 597
           VKHIYVDKNSAGCVYLQYDTVEAAINAQRAMHLRWFAGRQISVLFMQPQVYEAKFIGA
Sbjct: 541 VKHIYVDKNSAGCVYLQYDTVEAAINAQRAMHLRWFAGRQISVLFMQPQVYEAKFIGA 596

[Close]

BLAST of CSPI06G26910 vs. TAIR 10
Match: AT5G09880.1 (Splicing factor, CC1-like )

HSP 1 Score: 560.8 bits (1444), Expect = 1.3e-159
Identity = 369/597 (61.81%), Postives = 421/597 (70.52%), Query Frame = 0


Query: 1   MDFDEYDYLEKAVEEQDDRETKKPKRSDSERNEKSTRKREVDEEAGSGGREDEEVKVKRS 60
           M+FDEY+YLEK VEE      KK + S +ER+E+S RKRE  E  G  G E+E V     
Sbjct: 1   MEFDEYEYLEKTVEE-GAGSNKKKEESGNERSERSYRKREGGERQGEEGGEEERVS---- 60

Query: 61  RSEHENGKEDRDHSGRARDRHRRDREEETDGGKERDKERNRTRERGSSEKERDRDRDREE 120
                           +R +  R   EE  GGK                           
Sbjct: 61  ----------------SRSKKSRGDGEENGGGK--------------------------- 120

Query: 121 RDRDRDRHKEKERERDKDRKDKERDRERHKEKDRERDKDRRDKEREKEKERERRDRERRE 180
           RDR+R+RH+     RDKDR   ERD+ R   +D+E D++R  KER++    + RDRERRE
Sbjct: 121 RDRERERHRS---SRDKDR---ERDKVREGSRDKESDRERSSKERDRSDRDKPRDRERRE 180

Query: 181 REREEERSRRSRSRSVR-EREREVDVRESRRMKEKKDTTEPEADPERDQRTVFAYQMPLK 240
           RE      +RS SRS R E+E EV  R SRR ++KKD  EPEADPERDQRTVFAYQMPLK
Sbjct: 181 RE------KRSSSRSRREEKEPEVVERGSRRHRDKKD--EPEADPERDQRTVFAYQMPLK 240

Query: 241 ATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLGQPV 300
           ATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGY+EFYD MSVPMAIALSGQL LGQPV
Sbjct: 241 ATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLFLGQPV 300

Query: 301 MVKPSEAEKNLVQSNTTGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVELVQ 360
           MVKPSEAEKNL QSN+T   G GP    DRKLYVGNLHFNM+E  LR+IFEAFGPVELVQ
Sbjct: 301 MVKPSEAEKNLAQSNSTTVGGTGP---ADRKLYVGNLHFNMSELQLRQIFEAFGPVELVQ 360

Query: 361 LPLDLESGHCKGFGFVQFAHLEHAKAAQ-SLNGKLEIAGRTIKVSSVTDHIGAQESVAKS 420
           LPLD E+G CKGFGF+QF  LEH+KAAQ +LNGKLEIAGRTIKVSSV+DHIG Q+S  KS
Sbjct: 361 LPLDPETGQCKGFGFIQFVQLEHSKAAQIALNGKLEIAGRTIKVSSVSDHIGTQDSAPKS 420

Query: 421 NDLDDDEGGGLALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQ--RSTSLPVN 480
            D DDD+GGGLALNAQSRA+LMQKLDR+GIATSI GSLG P LNG+A NQ   + S P +
Sbjct: 421 ADFDDDDGGGLALNAQSRAMLMQKLDRSGIATSIVGSLGVPGLNGAAFNQPGMNPSFPTS 480

Query: 481 GQAAVAAPVLPANFTPP-VLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECSK 540
                   VLP    P  V + VG PSECLLLKNMFDP+TET P+FD+EI++DV +ECSK
Sbjct: 481 --------VLPTTAIPSFVNEHVGLPSECLLLKNMFDPATETEPNFDLEIRDDVADECSK 524

Query: 541 YGHVKHIYVDKNSAGCVYLQYDTVEAAINAQRAMHLRWFAGRQISVLFMQPQVYEAK 593
           YG V HIYVDKNSAG VYL++ +VEAA  AQRAMH+RWFA + IS  FM P  YEAK
Sbjct: 541 YGPVNHIYVDKNSAGFVYLRFQSVEAAAAAQRAMHMRWFAQKMISATFMPPHEYEAK 524

[Close]

BLAST of CSPI06G26910 vs. TAIR 10
Match: AT2G16940.1 (Splicing factor, CC1-like )

HSP 1 Score: 473.8 bits (1218), Expect = 2.1e-133
Identity = 334/612 (54.58%), Postives = 407/612 (66.50%), Query Frame = 0


Query: 1   MDFDEYDYLEKAVEEQDDRETKKPKRSDSERNEKSTRKREVDEEAGSGGREDEEVKVKRS 60
           MDFDEY+YLEK VE                          ++ E G+GG  DE+VK    
Sbjct: 1   MDFDEYEYLEKTVENP-----------------------HLENEVGNGG-GDEKVK---- 60

Query: 61  RSEHENGKEDRDHSGRARDRHRRDREEETDGGKERDKERNRTRERGSSEKERDRDRDREE 120
                 GKE R  S R R   +++R+E+ DG   R  +R+R+  R  S            
Sbjct: 61  ----SEGKE-RSRSSRHRGDKKKERDEDEDG---RRSKRSRSHHRSRS------------ 120

Query: 121 RDRDRDRHKEKERERDKDR-KDKERDRERHKEKDRERDKDRRDKEREKEKERERRDRERR 180
           RDR+RDRH+     RD+DR KD +++    K+++R+RDKDR  K R+ EK+R RR R R 
Sbjct: 121 RDRERDRHRSSREHRDRDREKDVDKEERNGKDRERDRDKDRDSKGRDHEKDRSRRSRSRS 180

Query: 181 EREREEERSRRSRSRSVREREREVDVRESRRMKEKK-DTTEPEADPERDQRTVFAYQMPL 240
           ER R +ER  +S     +ERE +   R+ RR K+KK D  EPEADPERDQRTVFAYQ+ L
Sbjct: 181 ERHRSQER-EKSLEIEPKERETKDRDRDRRRHKDKKEDKVEPEADPERDQRTVFAYQIAL 240

Query: 241 KATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLGQP 300
           +ATERDVYEFFS+AGKVRDVR+IMDR SRRS+G+GYVEFYD MSVPMAIALSGQ LLGQP
Sbjct: 241 RATERDVYEFFSRAGKVRDVRIIMDRISRRSRGIGYVEFYDTMSVPMAIALSGQPLLGQP 300

Query: 301 VMVKPSEAEKNLVQSNTTGASGA----GPYGAVDRKLYVGNLHFNMTETHLREIFEAFGP 360
           VMVKPSEAEKNLVQS TT A+GA    GPY    R+LYVGNLH NM+E  LR++FE+FG 
Sbjct: 301 VMVKPSEAEKNLVQS-TTAAAGAGGMLGPYSGGARRLYVGNLHINMSEDDLRKVFESFGS 360

Query: 361 VELVQLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQES 420
           VELVQ+P D E+G CKGFGFVQFA LE A+ A +LNG+LEIAGR IKVS+VTD     E+
Sbjct: 361 VELVQVPRD-ETGLCKGFGFVQFARLEDARNALNLNGQLEIAGRAIKVSAVTDQTEVPEA 420

Query: 421 --VAKSNDLDDDEGGGLALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSTS 480
                + DLDDD+GGGL+LNAQSRALLMQKLDR+G A+S  G   A   NG      S +
Sbjct: 421 GQTQTTGDLDDDDGGGLSLNAQSRALLMQKLDRSGTASS-TGLTTAASFNGGVSTISSLA 480

Query: 481 LPVNGQAAVAA-----------PVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDF 540
            P   Q +  A            V+PA F P     +G PSECLLLKNMFDPSTET  DF
Sbjct: 481 APALVQGSFPAVAGLAGSGIIPGVIPAGFDP-----IGVPSECLLLKNMFDPSTETEDDF 540

Query: 541 DMEIKEDVEEECSKYGHVKHIYVDKNSAGCVYLQYDTVEAAINAQRAMHLRWFAGRQISV 594
           D +IKEDV+EECSK+G + HI+VDKNS G VYL+++  +AAI AQRA+H RWFAG+ I+ 
Sbjct: 541 DEDIKEDVKEECSKFGKLNHIFVDKNSVGFVYLRFENAQAAIGAQRALHGRWFAGKMITA 555

[Close]

BLAST of CSPI06G26910 vs. TAIR 10
Match: AT2G16940.3 (Splicing factor, CC1-like )

HSP 1 Score: 435.6 bits (1119), Expect = 6.2e-122
Identity = 328/632 (51.90%), Postives = 407/632 (64.40%), Query Frame = 0


Query: 1   MDFDEYDYLEKAVEEQDDRETKKPKRSDSERNEKSTRKREVDEEAGSGGREDEEVK---V 60
           MDFDEY+YLEK VE                          ++ E G+GG  DE+VK    
Sbjct: 1   MDFDEYEYLEKTVENP-----------------------HLENEVGNGG-GDEKVKSEGK 60

Query: 61  KRSRSEHENG--KEDRDHSGRARDRHRRDREEETDGGKERDKERNRTRERGSSEKERDRD 120
           +RSRS    G  K++RD      D  R  R       + RD+ER+R R   SS + RDRD
Sbjct: 61  ERSRSSRHRGDKKKERDED---EDGRRSKRSRSHHRSRSRDRERDRHR---SSREHRDRD 120

Query: 121 RDREERDRDRDRHKEKERERDKDRKDKERDRERHK-EKDRERDKDRRDKEREKEKERERR 180
           R+++  D++    K++ER+RDKDR  K RD E+ +  + R R +  R +EREK  E E +
Sbjct: 121 REKDV-DKEERNGKDRERDRDKDRDSKGRDHEKDRSRRSRSRSERHRSQEREKSLEIEPK 180

Query: 181 DRERREREREEERSRRSRSRSVR---EREREVDVRE----SRRMKEKKDTTEPEADPERD 240
           +RE ++R+R+           V    + +  +  R+     R   +K+D  EPEADPERD
Sbjct: 181 ERETKDRDRDRRFILMLLGPLVLPSVQLDGALPCRDFSCFIRHKDKKEDKVEPEADPERD 240

Query: 241 QRTVFAYQMPLKATERDVYEFFSKAGK---------VRDVRLIMDRNSRRSKGVGYVEFY 300
           QRTVFAYQ+ L+ATERDVYEFFS+AGK         VRDVR+IMDR SRRS+G+GYVEFY
Sbjct: 241 QRTVFAYQIALRATERDVYEFFSRAGKVCPFLCRFHVRDVRIIMDRISRRSRGIGYVEFY 300

Query: 301 DAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTTGASGA----GPYGAVDRKLYVG 360
           D MSVPMAIALSGQ LLGQPVMVKPSEAEKNLVQS TT A+GA    GPY    R+LYVG
Sbjct: 301 DTMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQS-TTAAAGAGGMLGPYSGGARRLYVG 360

Query: 361 NLHFNMTETHLREIFEAFGPVELVQLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLE 420
           NLH NM+E  LR++FE+FG VELVQ+P D E+G CKGFGFVQFA LE A+ A +LNG+LE
Sbjct: 361 NLHINMSEDDLRKVFESFGSVELVQVPRD-ETGLCKGFGFVQFARLEDARNALNLNGQLE 420

Query: 421 IAGRTIKVSSVTDHIGAQES--VAKSNDLDDDEGGGLALNAQSRALLMQKLDRTGIATSI 480
           IAGR IKVS+VTD     E+     + DLDDD+GGGL+LNAQSRALLMQKLDR+G A+S 
Sbjct: 421 IAGRAIKVSAVTDQTEVPEAGQTQTTGDLDDDDGGGLSLNAQSRALLMQKLDRSGTASS- 480

Query: 481 AGSLGAPVLNGSAPNQRSTSLPVNGQAAVAA-----------PVLPANFTPPVLQSVGSP 540
            G   A   NG      S + P   Q +  A            V+PA F P     +G P
Sbjct: 481 TGLTTAASFNGGVSTISSLAAPALVQGSFPAVAGLAGSGIIPGVIPAGFDP-----IGVP 540

Query: 541 SECLLLKNMFDPSTETAPDFDMEIKEDVEEECSKYGHVKHIYVDKNSAGCVYLQYDTVEA 594
           SECLLLKNMFDPSTET  DFD +IKEDV+EECSK+G + HI+VDKNS G VYL+++  +A
Sbjct: 541 SECLLLKNMFDPSTETEDDFDEDIKEDVKEECSKFGKLNHIFVDKNSVGFVYLRFENAQA 593

[Close]

BLAST of CSPI06G26910 vs. TAIR 10
Match: AT2G16940.2 (Splicing factor, CC1-like )

HSP 1 Score: 434.1 bits (1115), Expect = 1.8e-121
Identity = 324/639 (50.70%), Postives = 409/639 (64.01%), Query Frame = 0


Query: 1   MDFDEYDYLEKAVE----EQDDRETKKPKRSDSERNEKSTRKREVDEEAGSGGREDEEVK 60
           MDFDEY+YLEK VE    E +       ++  SE  E+S   R   ++      +++  +
Sbjct: 1   MDFDEYEYLEKTVENPHLENEVGNGGGDEKVKSEGKERSRSSRHRGDKKKERDEDEDGRR 60

Query: 61  VKRSRSEHENGKEDRDHSGRARDRHRRDREEETDGGKERDKERNRTR-ERGSSEKERDRD 120
            KRSRS H +   DR+     RDRHR  RE      ++RD+E++  + ER   ++ERDRD
Sbjct: 61  SKRSRSHHRSRSRDRE-----RDRHRSSREH-----RDRDREKDVDKEERNGKDRERDRD 120

Query: 121 RDREERDRDRDRHKEKERERDKDRKDKERDRERHKEKDRERDKDRRDKERE-KEKERERR 180
           +DR+ + RD         E+D+ R+ + R  ERH+ ++RE+  +   KERE K+++R+RR
Sbjct: 121 KDRDSKGRD--------HEKDRSRRSRSRS-ERHRSQEREKSLEIEPKERETKDRDRDRR 180

Query: 181 DRERRERE-----------------------REEERSRRSRSRSVREREREVDVRESRRM 240
                  +                          E + R+       R+R  D       
Sbjct: 181 YTSELVIDFIIYVHWYCLLYNLMGHVPFKIIIVIEGTSRASCVYAYWRKRHKD------- 240

Query: 241 KEKKDTTEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKG 300
            +K+D  EPEADPERDQRTVFAYQ+ L+ATERDVYEFFS+AGKVRDVR+IMDR SRRS+G
Sbjct: 241 -KKEDKVEPEADPERDQRTVFAYQIALRATERDVYEFFSRAGKVRDVRIIMDRISRRSRG 300

Query: 301 VGYVEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTTGASGA----GPYGAV 360
           +GYVEFYD MSVPMAIALSGQ LLGQPVMVKPSEAEKNLVQS TT A+GA    GPY   
Sbjct: 301 IGYVEFYDTMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQS-TTAAAGAGGMLGPYSGG 360

Query: 361 DRKLYVGNLHFNMTETHLREIFEAFGPVELVQLPLDLESGHCKGFGFVQFAHLEHAKAAQ 420
            R+LYVGNLH NM+E  LR++FE+FG VELVQ+P D E+G CKGFGFVQFA LE A+ A 
Sbjct: 361 ARRLYVGNLHINMSEDDLRKVFESFGSVELVQVPRD-ETGLCKGFGFVQFARLEDARNAL 420

Query: 421 SLNGKLEIAGRTIKVSSVTDHIGAQES--VAKSNDLDDDEGGGLALNAQSRALLMQKLDR 480
           +LNG+LEIAGR IKVS+VTD     E+     + DLDDD+GGGL+LNAQSRALLMQKLDR
Sbjct: 421 NLNGQLEIAGRAIKVSAVTDQTEVPEAGQTQTTGDLDDDDGGGLSLNAQSRALLMQKLDR 480

Query: 481 TGIATSIAGSLGAPVLNGSAPNQRSTSLPVNGQAAVAA-----------PVLPANFTPPV 540
           +G A+S  G   A   NG      S + P   Q +  A            V+PA F P  
Sbjct: 481 SGTASS-TGLTTAASFNGGVSTISSLAAPALVQGSFPAVAGLAGSGIIPGVIPAGFDP-- 540

Query: 541 LQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECSKYGHVKHIYVDKNSAGCVYL 594
              +G PSECLLLKNMFDPSTET  DFD +IKEDV+EECSK+G + HI+VDKNS G VYL
Sbjct: 541 ---IGVPSECLLLKNMFDPSTETEDDFDEDIKEDVKEECSKFGKLNHIFVDKNSVGFVYL 600

The following BLAST results are available for this feature:

BLAST of CSPI06G26910 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5RC80	1.3e-52	39.85	RNA-binding protein 39 OS=Pongo abelii OX=9601 GN=RBM39 PE=2 SV=1	[more]
Q14498	3.0e-52	39.82	RNA-binding protein 39 OS=Homo sapiens OX=9606 GN=RBM39 PE=1 SV=2	[more]
Q8VH51	3.0e-52	39.82	RNA-binding protein 39 OS=Mus musculus OX=10090 GN=Rbm39 PE=1 SV=2	[more]
O13845	2.3e-28	30.32	RNA-binding protein rsd1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) ...	[more]
Q86U06	3.7e-26	34.30	Probable RNA-binding protein 23 OS=Homo sapiens OX=9606 GN=RBM23 PE=1 SV=1	[more]

BLAST of CSPI06G26910 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KFB3	7.6e-301	98.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G486730 PE=4 SV=1	[more]
A0A1S3B2E3	2.9e-300	98.17	RNA-binding protein 39 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103485239 PE=4 S...	[more]
A0A1S3B1Y4	9.2e-299	97.84	RNA-binding protein 39 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103485239 PE=4 S...	[more]
A0A6J1GD19	8.7e-289	94.33	RNA-binding protein 39-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]
A0A6J1ISX3	1.5e-285	93.81	RNA-binding protein 39-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC1114781...	[more]

BLAST of CSPI06G26910 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004141977.1	1.6e-300	98.67	RNA-binding protein 39 isoform X3 [Cucumis sativus] >KGN48400.1 hypothetical pro...	[more]
XP_008440993.1	5.9e-300	98.17	PREDICTED: RNA-binding protein 39 isoform X4 [Cucumis melo]	[more]
XP_011657782.1	5.0e-299	98.34	RNA-binding protein 39 isoform X1 [Cucumis sativus]	[more]
XP_008440991.1	1.9e-298	97.84	PREDICTED: RNA-binding protein 39 isoform X2 [Cucumis melo]	[more]
XP_038881757.1	1.8e-293	96.15	RNA-binding protein 39 isoform X2 [Benincasa hispida]	[more]

BLAST of CSPI06G26910 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G09880.1	1.3e-159	61.81	Splicing factor, CC1-like	[more]
AT2G16940.1	2.1e-133	54.58	Splicing factor, CC1-like	[more]
AT2G16940.3	6.2e-122	51.90	Splicing factor, CC1-like	[more]
AT2G16940.2	1.8e-121	50.70	Splicing factor, CC1-like	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 160..194
None	No IPR available	COILS	Coil	Coil	coord: 114..134
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 12..228
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..229
None	No IPR available	PANTHER	PTHR48036	SPLICING FACTOR (PAD-1), PUTATIVE (AFU_ORTHOLOGUE AFUA_1G15810)-RELATED	coord: 85..517 coord: 1..103
None	No IPR available	PANTHER	PTHR48036:SF5	CC1-LIKE SPLICING FACTOR	coord: 1..103
None	No IPR available	PANTHER	PTHR48036:SF5	CC1-LIKE SPLICING FACTOR	coord: 85..517
None	No IPR available	CDD	cd12283	RRM1_RBM39_like	coord: 230..302 e-value: 1.66378E-45 score: 152.375
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 230..302 e-value: 2.6E-17 score: 73.5 coord: 330..403 e-value: 1.8E-24 score: 97.3
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 331..401 e-value: 1.6E-18 score: 66.3 coord: 236..298 e-value: 2.9E-11 score: 43.1
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 229..306 score: 15.562085
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 329..407 score: 17.915731
IPR029123	Splicing factor RBM39, linker	PFAM	PF15519	RBM39linker	coord: 421..516 e-value: 4.0E-22 score: 79.1
IPR006509	Splicing factor, RBM39-like	TIGRFAM	TIGR01622	TIGR01622	coord: 109..516 e-value: 1.7E-132 score: 440.9
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 324..420 e-value: 8.2E-25 score: 89.0
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 157..314 e-value: 3.8E-28 score: 100.4
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 222..313
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 328..405

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G26910.1	CSPI06G26910.1	mRNA
CSPI06G26910.2	CSPI06G26910.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006397	mRNA processing
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding