CSPI06G26890 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI06G26890
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Unknown protein
Location	Chr6: 23704141 .. 23704618 (+)
RNA-Seq Expression	CSPI06G26890
Synteny	CSPI06G26890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAAAAGATATCACTACACACTTCATTCTCTCTCTCTTGTTTCTCTCTCTACCTAGAGCTTGCTTTTGTTTCAATGGAAGAAGAATCCTCGAGTTCGCCTAACTCGGAGGAGGTATTGGGTGCGGCGCAGCAGTTGATGCAGTTAAGCAACGACGACAATAGTAGCAATGTCGACGTAGTCGTTGCGGAGGCGAAGAAGAACAAGAAGAAGGATTTTGGTGGGGATGGGGGTGGGGGTGGTGGCTGTCGAGAGGAAGAGGTTGATCAAAAGAGATGCCAAATAGAATCGTCGGTTTGGTTGAAAATTGAAGAGATTTTTGGGAAAGATAATGAAGGAGATCATTGTTGTCATCATCATTCTTCTATTATTAATTCTCGTCCTAAGAAGAGACGATTTCGATCCATTCAAAGTATTTATATGAAGACTAAACCTATCACTAATGGTAGATTCTCTACTAAGACAGTGGTCGGGAATTGA

mRNA sequence

TAAAAAGATATCACTACACACTTCATTCTCTCTCTCTTGTTTCTCTCTCTACCTAGAGCTTGCTTTTGTTTCAATGGAAGAAGAATCCTCGAGTTCGCCTAACTCGGAGGAGGTATTGGGTGCGGCGCAGCAGTTGATGCAGTTAAGCAACGACGACAATAGTAGCAATGTCGACGTAGTCGTTGCGGAGGCGAAGAAGAACAAGAAGAAGGATTTTGGTGGGGATGGGGGTGGGGGTGGTGGCTGTCGAGAGGAAGAGGTTGATCAAAAGAGATGCCAAATAGAATCGTCGGTTTGGTTGAAAATTGAAGAGATTTTTGGGAAAGATAATGAAGGAGATCATTGTTGTCATCATCATTCTTCTATTATTAATTCTCGTCCTAAGAAGAGACGATTTCGATCCATTCAAAGTATTTATATGAAGACTAAACCTATCACTAATGGTAGATTCTCTACTAAGACAGTGGTCGGGAATTGA

Coding sequence (CDS)

ATGGAAGAAGAATCCTCGAGTTCGCCTAACTCGGAGGAGGTATTGGGTGCGGCGCAGCAGTTGATGCAGTTAAGCAACGACGACAATAGTAGCAATGTCGACGTAGTCGTTGCGGAGGCGAAGAAGAACAAGAAGAAGGATTTTGGTGGGGATGGGGGTGGGGGTGGTGGCTGTCGAGAGGAAGAGGTTGATCAAAAGAGATGCCAAATAGAATCGTCGGTTTGGTTGAAAATTGAAGAGATTTTTGGGAAAGATAATGAAGGAGATCATTGTTGTCATCATCATTCTTCTATTATTAATTCTCGTCCTAAGAAGAGACGATTTCGATCCATTCAAAGTATTTATATGAAGACTAAACCTATCACTAATGGTAGATTCTCTACTAAGACAGTGGTCGGGAATTGA

Protein sequence

MEEESSSSPNSEEVLGAAQQLMQLSNDDNSSNVDVVVAEAKKNKKKDFGGDGGGGGGCREEEVDQKRCQIESSVWLKIEEIFGKDNEGDHCCHHHSSIINSRPKKRRFRSIQSIYMKTKPITNGRFSTKTVVGN*

Homology

[Close]

BLAST of CSPI06G26890 vs. ExPASy TrEMBL
Match: A0A0A0KFU1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G486710 PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 5.7e-55
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MEEESSSSPNSEEVLGAAQQLMQLSNDDNSSNVDVVVAEAKKNKKKDFGGDGGGGGGCRE 60
           MEEESSSSPNSEEVLGAAQQLMQLSNDDNSSNVDVVVAEAKKNKKKDFGGDGGGGGGCRE
Sbjct: 1   MEEESSSSPNSEEVLGAAQQLMQLSNDDNSSNVDVVVAEAKKNKKKDFGGDGGGGGGCRE 60

Query: 61  EEVDQKRCQIESSVWLKIEEIFGKDNEGDHCCHHHSSIINSRPKKRRFRSIQ 113
           EEVDQKRCQIESSVWLKIEEIFGKDNEGDHCCHHHSSIINSRPKKRRFRSIQ
Sbjct: 61  EEVDQKRCQIESSVWLKIEEIFGKDNEGDHCCHHHSSIINSRPKKRRFRSIQ 112

[Close]

BLAST of CSPI06G26890 vs. ExPASy TrEMBL
Match: A0A5A7SLI9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G00160 PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 1.2e-49
Identity = 118/135 (87.41%), Postives = 120/135 (88.89%), Query Frame = 0


Query: 1   MEEESSSSPNSEEVLGAAQQLMQLSNDDNSSNVDVVVAEAKKNKKKDFGGDGGGGGGCRE 60
           MEEESSSS NSEEVLGAAQQLMQLSNDDNSSNVDVVVA AKKNKKKD  G GG     RE
Sbjct: 1   MEEESSSSRNSEEVLGAAQQLMQLSNDDNSSNVDVVVA-AKKNKKKDCCGGGG-----RE 60

Query: 61  EEVDQKRCQIESSVWLKIEEIFGKDNEGDHCCHHHSSIINSRPKKRRFRSIQSIYMKTKP 120
           EEVDQKRCQIESS+WLKIEEIFGKD EG  C HHHSSIINSRPKKRRFRSIQSIYMKTKP
Sbjct: 61  EEVDQKRCQIESSIWLKIEEIFGKD-EGGCCDHHHSSIINSRPKKRRFRSIQSIYMKTKP 120

Query: 121 -ITNGRFSTKTVVGN 135
            ITNGRFSTKT+VGN
Sbjct: 121 MITNGRFSTKTMVGN 128

[Close]

BLAST of CSPI06G26890 vs. ExPASy TrEMBL
Match: A0A6J1BYI0 (uncharacterized protein LOC111005872 OS=Momordica charantia OX=3673 GN=LOC111005872 PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 8.3e-30
Identity = 83/132 (62.88%), Postives = 96/132 (72.73%), Query Frame = 0


Query: 1   MEEESSSSPNSEEVLGAAQQLMQLSNDDNSSNVDVVVAEAKKNKKKDFGGDGGGGGGCRE 60
           MEEESS S N EEVLGAAQQLMQLSN+D+SS+ +VV AE KKN KK  GGDGG      E
Sbjct: 1   MEEESSCSRNMEEVLGAAQQLMQLSNEDDSSS-NVVTAEKKKNNKKRGGGDGG------E 60

Query: 61  EEVDQKRCQIESSVWLKIEEIFGKDNEGDHCCHHHSSIINSRPKKRRFRSIQSIYMKTKP 120
           EEVDQKRCQIE+S+W KIEEIFGK+ E        +SI   + ++ RFRSIQSIYM TKP
Sbjct: 61  EEVDQKRCQIEASIWSKIEEIFGKEEE--ELEEDRNSICRPKKRRSRFRSIQSIYMTTKP 120

Query: 121 ITNGRFSTKTVV 133
           I N RFS   ++
Sbjct: 121 IINARFSGNRII 123

[Close]

BLAST of CSPI06G26890 vs. ExPASy TrEMBL
Match: A0A6J1GFL5 (uncharacterized protein LOC111453726 OS=Cucurbita moschata OX=3662 GN=LOC111453726 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 3.4e-23
Identity = 78/127 (61.42%), Postives = 88/127 (69.29%), Query Frame = 0


Query: 10  NSEEVLGAAQQLMQLS-----NDDNSSNVDVVVAEAKKNK--KKDFGGDGGGGGGCREEE 69
           +SEEVL AAQ LMQLS     +DDN S+  VV  E  KNK  KK  GGD G GG   EEE
Sbjct: 5   SSEEVLVAAQLLMQLSIEDDDDDDNCSSNVVVAVEKMKNKKLKKGHGGDRGDGG--EEEE 64

Query: 70  VDQKRCQIESSVWLKIEEIFGKDNEGDHCCHHHSSIINSRPKKRRFRSIQSIYMKTKPIT 129
           VDQKR QIE+S+WLKIEEIFGKD+E        +SI   RPKKRRFRS+QSIY+ TKPI 
Sbjct: 65  VDQKRYQIETSIWLKIEEIFGKDDEE----QDFNSI--CRPKKRRFRSLQSIYVTTKPIG 123

[Close]

BLAST of CSPI06G26890 vs. ExPASy TrEMBL
Match: A0A6J5XS61 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS37498 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 4.7e-09
Identity = 50/122 (40.98%), Postives = 67/122 (54.92%), Query Frame = 0


Query: 11  SEEVLGAAQQLMQLSNDDNSSNVDVVVA-EAKKNKKKDFGGDGGGGGGCREEEVDQKRCQ 70
           +E  L AAQQLMQLS++DN++N     +  ++ NK  +  G          EEVDQ R  
Sbjct: 16  TESELAAAQQLMQLSDEDNNNNSSSSSSNSSRSNKNTNHEG----------EEVDQ-RPL 75

Query: 71  IESSVWLKIEEIFGKDNEGDHCCHHHSSIINSRPKKRRFRSIQSIYMKTKPITNGRFSTK 130
           I   +W KIEEIFGK+ + D            RPKKRR+RS+ SIY+ +KP+  G    K
Sbjct: 76  INVIIWAKIEEIFGKEEDVD------------RPKKRRYRSLASIYLTSKPVNAGSAHGK 114

Query: 131 TV 132
            V
Sbjct: 136 KV 114

[Close]

BLAST of CSPI06G26890 vs. NCBI nr
Match: XP_031742655.1 (uncharacterized protein LOC116404425 [Cucumis sativus])

HSP 1 Score: 265.8 bits (678), Expect = 2.1e-67
Identity = 133/134 (99.25%), Postives = 134/134 (100.00%), Query Frame = 0


Query: 1   MEEESSSSPNSEEVLGAAQQLMQLSNDDNSSNVDVVVAEAKKNKKKDFGGDGGGGGGCRE 60
           MEEESSSSPNSEEVLGAAQQLMQLSNDDNSSNVDVVVAEAKKNKKKDFGGDGGGGGGCRE
Sbjct: 1   MEEESSSSPNSEEVLGAAQQLMQLSNDDNSSNVDVVVAEAKKNKKKDFGGDGGGGGGCRE 60

Query: 61  EEVDQKRCQIESSVWLKIEEIFGKDNEGDHCCHHHSSIINSRPKKRRFRSIQSIYMKTKP 120
           EEVDQKRCQIESSVWLKIEEIFGKDNEGDHCCHHHSSIINSRPKKRRFRSIQSIYMKTKP
Sbjct: 61  EEVDQKRCQIESSVWLKIEEIFGKDNEGDHCCHHHSSIINSRPKKRRFRSIQSIYMKTKP 120

Query: 121 ITNGRFSTKTVVGN 135
           ITNGRFSTKT+VGN
Sbjct: 121 ITNGRFSTKTMVGN 134

[Close]

BLAST of CSPI06G26890 vs. NCBI nr
Match: KGN48398.1 (hypothetical protein Csa_004350 [Cucumis sativus])

HSP 1 Score: 223.4 bits (568), Expect = 1.2e-54
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MEEESSSSPNSEEVLGAAQQLMQLSNDDNSSNVDVVVAEAKKNKKKDFGGDGGGGGGCRE 60
           MEEESSSSPNSEEVLGAAQQLMQLSNDDNSSNVDVVVAEAKKNKKKDFGGDGGGGGGCRE
Sbjct: 1   MEEESSSSPNSEEVLGAAQQLMQLSNDDNSSNVDVVVAEAKKNKKKDFGGDGGGGGGCRE 60

Query: 61  EEVDQKRCQIESSVWLKIEEIFGKDNEGDHCCHHHSSIINSRPKKRRFRSIQ 113
           EEVDQKRCQIESSVWLKIEEIFGKDNEGDHCCHHHSSIINSRPKKRRFRSIQ
Sbjct: 61  EEVDQKRCQIESSVWLKIEEIFGKDNEGDHCCHHHSSIINSRPKKRRFRSIQ 112

[Close]

BLAST of CSPI06G26890 vs. NCBI nr
Match: KAA0025567.1 (hypothetical protein E6C27_scaffold253G00560 [Cucumis melo var. makuwa] >TYK12441.1 hypothetical protein E5676_scaffold255G00160 [Cucumis melo var. makuwa])

HSP 1 Score: 205.7 bits (522), Expect = 2.5e-49
Identity = 118/135 (87.41%), Postives = 120/135 (88.89%), Query Frame = 0


Query: 1   MEEESSSSPNSEEVLGAAQQLMQLSNDDNSSNVDVVVAEAKKNKKKDFGGDGGGGGGCRE 60
           MEEESSSS NSEEVLGAAQQLMQLSNDDNSSNVDVVVA AKKNKKKD  G GG     RE
Sbjct: 1   MEEESSSSRNSEEVLGAAQQLMQLSNDDNSSNVDVVVA-AKKNKKKDCCGGGG-----RE 60

Query: 61  EEVDQKRCQIESSVWLKIEEIFGKDNEGDHCCHHHSSIINSRPKKRRFRSIQSIYMKTKP 120
           EEVDQKRCQIESS+WLKIEEIFGKD EG  C HHHSSIINSRPKKRRFRSIQSIYMKTKP
Sbjct: 61  EEVDQKRCQIESSIWLKIEEIFGKD-EGGCCDHHHSSIINSRPKKRRFRSIQSIYMKTKP 120

Query: 121 -ITNGRFSTKTVVGN 135
            ITNGRFSTKT+VGN
Sbjct: 121 MITNGRFSTKTMVGN 128

[Close]

BLAST of CSPI06G26890 vs. NCBI nr
Match: XP_022133223.1 (uncharacterized protein LOC111005872 [Momordica charantia])

HSP 1 Score: 139.8 bits (351), Expect = 1.7e-29
Identity = 83/132 (62.88%), Postives = 96/132 (72.73%), Query Frame = 0


Query: 1   MEEESSSSPNSEEVLGAAQQLMQLSNDDNSSNVDVVVAEAKKNKKKDFGGDGGGGGGCRE 60
           MEEESS S N EEVLGAAQQLMQLSN+D+SS+ +VV AE KKN KK  GGDGG      E
Sbjct: 1   MEEESSCSRNMEEVLGAAQQLMQLSNEDDSSS-NVVTAEKKKNNKKRGGGDGG------E 60

Query: 61  EEVDQKRCQIESSVWLKIEEIFGKDNEGDHCCHHHSSIINSRPKKRRFRSIQSIYMKTKP 120
           EEVDQKRCQIE+S+W KIEEIFGK+ E        +SI   + ++ RFRSIQSIYM TKP
Sbjct: 61  EEVDQKRCQIEASIWSKIEEIFGKEEE--ELEEDRNSICRPKKRRSRFRSIQSIYMTTKP 120

Query: 121 ITNGRFSTKTVV 133
           I N RFS   ++
Sbjct: 121 IINARFSGNRII 123

[Close]

BLAST of CSPI06G26890 vs. NCBI nr
Match: KAG6595108.1 (hypothetical protein SDJN03_11661, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 132.5 bits (332), Expect = 2.7e-27
Identity = 86/133 (64.66%), Postives = 98/133 (73.68%), Query Frame = 0


Query: 1   MEEESSS-SPNSEEVLGAAQQLMQLSNDDNSSNVDVVVAEAKKNKKKDFGGDGGGGGGCR 60
           MEEESSS S NSEEVL AAQQL+QLSN+D+SS+ +VV AE KK KK     + GGG G  
Sbjct: 1   MEEESSSCSRNSEEVLDAAQQLVQLSNEDDSSS-NVVTAENKKKKKIMKKKEDGGGDGGE 60

Query: 61  EEEVDQKRCQIESSVWLKIEEIFGKDNEGDHCCHHHSSIINSRPKKRRFRSIQSIYMKTK 120
           EEEVDQKRCQIE+S+  KIEEIFGKD++ D       SI   RP KRRFRSIQSIYM TK
Sbjct: 61  EEEVDQKRCQIETSICSKIEEIFGKDDDDDE--EGCGSI--CRPNKRRFRSIQSIYMNTK 120

Query: 121 PITNGRFSTKTVV 133
           P+ N RFS K +V
Sbjct: 121 PLVNARFSGKGIV 128

The following BLAST results are available for this feature:

BLAST of CSPI06G26890 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI06G26890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KFU1	5.7e-55	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G486710 PE=4 SV=1	[more]
A0A5A7SLI9	1.2e-49	87.41	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1BYI0	8.3e-30	62.88	uncharacterized protein LOC111005872 OS=Momordica charantia OX=3673 GN=LOC111005...	[more]
A0A6J1GFL5	3.4e-23	61.42	uncharacterized protein LOC111453726 OS=Cucurbita moschata OX=3662 GN=LOC1114537...	[more]
A0A6J5XS61	4.7e-09	40.98	Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS37498 PE=...	[more]

BLAST of CSPI06G26890 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031742655.1	2.1e-67	99.25	uncharacterized protein LOC116404425 [Cucumis sativus]	[more]
KGN48398.1	1.2e-54	100.00	hypothetical protein Csa_004350 [Cucumis sativus]	[more]
KAA0025567.1	2.5e-49	87.41	hypothetical protein E6C27_scaffold253G00560 [Cucumis melo var. makuwa] >TYK1244...	[more]
XP_022133223.1	1.7e-29	62.88	uncharacterized protein LOC111005872 [Momordica charantia]	[more]
KAG6595108.1	2.7e-27	64.66	hypothetical protein SDJN03_11661, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CSPI06G26890 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..63
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 8..30
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G26890.1	CSPI06G26890.1	mRNA