CSPI06G26650 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI06G26650
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr6: 23497248 .. 23497470 (+)
RNA-Seq ExpressionCSPI06G26650
SyntenyCSPI06G26650
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATGAAGAAGATGAGTTATTGATGATTTGCTGCAATGCTTCTTCACCAATTGCTACCAACAAACAACAACAGCAACAACAACAACAAGAATCTGCGTTGGTCAAATTGAAGCCTAAAAATGGTAATAATTATTATTACGGCCATTTCTTTGGTTTCTTGCCTAGACGAATCCCCATTCCTGCCTCTGGTCCTTCAAGAAAACACAATGATATTGGCTTAA

mRNA sequence

ATGAATGAAGAAGATGAGTTATTGATGATTTGCTGCAATGCTTCTTCACCAATTGCTACCAACAAACAACAACAGCAACAACAACAACAAGAATCTGCGTTGGTCAAATTGAAGCCTAAAAATGACGAATCCCCATTCCTGCCTCTGGTCCTTCAAGAAAACACAATGATATTGGCTTAA

Coding sequence (CDS)

ATGAATGAAGAAGATGAGTTATTGATGATTTGCTGCAATGCTTCTTCACCAATTGCTACCAACAAACAACAACAGCAACAACAACAACAAGAATCTGCGTTGGTCAAATTGAAGCCTAAAAATGACGAATCCCCATTCCTGCCTCTGGTCCTTCAAGAAAACACAATGATATTGGCTTAA

Protein sequence

MNEEDELLMICCNASSPIATNKQQQQQQQQESALVKLKPKNDESPFLPLVLQENTMILA*
Homology
[Close]
BLAST of CSPI06G26650 vs. ExPASy TrEMBL
Match: A0A0A0KFQ3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G484020 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.2e-12
Identity = 41/41 (100.00%), Postives = 41/41 (100.00%), Query Frame = 0 

Query: 1  MNEEDELLMICCNASSPIATNKQQQQQQQQESALVKLKPKN 42
          MNEEDELLMICCNASSPIATNKQQQQQQQQESALVKLKPKN
Sbjct: 10 MNEEDELLMICCNASSPIATNKQQQQQQQQESALVKLKPKN 50

[Close]
BLAST of CSPI06G26650 vs. NCBI nr
Match: KAE8647464.1 (hypothetical protein Csa_004278 [Cucumis sativus])

HSP 1 Score: 81.6 bits (200), Expect = 2.5e-12
Identity = 41/41 (100.00%), Postives = 41/41 (100.00%), Query Frame = 0 

Query: 1  MNEEDELLMICCNASSPIATNKQQQQQQQQESALVKLKPKN 42
          MNEEDELLMICCNASSPIATNKQQQQQQQQESALVKLKPKN
Sbjct: 40 MNEEDELLMICCNASSPIATNKQQQQQQQQESALVKLKPKN 80

The following BLAST results are available for this feature:
BLAST of CSPI06G26650 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI06G26650 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KFQ31.2e-12100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G484020 PE=4 SV=1[more]
BLAST of CSPI06G26650 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8647464.12.5e-12100.00hypothetical protein Csa_004278 [Cucumis sativus][more]
BLAST of CSPI06G26650 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI06G26650.1CSPI06G26650.1mRNA