CSPI06G25800 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI06G25800
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Transcription termination factor MTEF1
Location	Chr6: 22885071 .. 22886896 (-)
RNA-Seq Expression	CSPI06G25800
Synteny	CSPI06G25800

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTGAAGATAGCACTTATCCTCTTCAATTCTCTTCCTCAACCACTTCCTGGATTTCCCTCTGTTAAACCCCACAAAGCTCTCCATTAACCATGCAATGGCGGATTCGTCTCTTCACCTCCTCTCCAATGGCGGATTCATCCACCATTCTTCTCCTTCCCCTCTCTTCCCCTCTCTTCCTCGCTCCAGAACCCTCCATTTCCCCGTACTTTCCAATTCCAGAACCTCCTTCATCTTCCCTTCCAAACTCCCTCCTCGCAACCCCGCCATTCCTCCCCTCTCCCCCCCGCTCCCTCCATCTCCCCCTCACACCGACCATCACTCCGACTTTCAGGAGAAAATGCTCTTCCTCGACTCCATTGGCATCGACTTCCTCTCCGTCATCAAAGACCACCCTCCCGTCGCCTCTGCTTCCCTCCCCGACATCAGATCAGCCGTCGATTTCATGACCTCCATGAATTTCACCACCCTCGAACTCCGTCGAATCGTCGGTATGTGCCCTGAGATTCTCACCTCTCGCGCTTCCGTTCTTATCCCTATCTTCACCTTCCTCCTCCGCGAAGCTCGAGTCGACGGTTCCGACATCAAACGCGTTATCAATCGACGCCCTAGATTGTTAGCCTGTAGCGTGAAAGATCAGCTCCGTCCAACTCTCTACTTCCTGCAAAGCATCGGCATATCCGAGGTACATAAACACACATCCTTACTCTCATGTAGCGTTGAAGAGAAACTGATTCCGAGAATCGAGTTCTTCGAGAACTTAGGGTTTTCCCGACGGGATGCTTTGATAATGTTCCGGCGATTCCCGCAGCTGTTTTGCTACAGCATAAAGGAGAATCTGGAACCGAAACTGAATTACTTTGTGGTGGAAATGGGGAGAGAATTGAAAGAATTGAAGGAATTTCCTCACTATTTCTCGTTTAGTTTAGAGAACAGGATCAAGCCAAGACATCAAAGCTGTGTGGAGAAGGGAGTTTGTTTTCCATTGCCGGAGTTGTTGAAAAGCAGCGAAATGAAATTCCGGGAGAAATTGGAGGTATGTTGCGATTCTTCAATACCCTTTAGAACTTCTCCTTTGTGGTGTACAAAATTGTGATAAATTCAATTTTCTTTAATCCAAAAGTATAGAATTCTTCTTCATAGCTCTCTGTTTCTATCTTCATTTCAATTCTGGTCCGATTATGTCTTTGGGTTCTTACACTTAATCTAATTAGAGGTTTAGCATAAGATAATTCCATTTAGTGGAACATCACAATATTTTAGGTAGTTTAAGTTCTTCAGTTTAACCAATATGTGAATAATATCAAAGGGGAAAATAATCATCGTTTTGATTTCGGTAGATTTTAATATTTTAGATTTCCGTTCTTAATTTTTAGTATATTATATTTTTACTCTTCAATTTTAATTGAAGTACATAGATCAAAATAATATATACTTTATTGAAAAGATTGTGGTCGTTTTACGAGTGATTCTTTTGCATTAAAACGTGGGTTTTTGAAATAGTCGTGTTTGTTTTCATTGAGCAGCAATGGGAGTGGGAGTGAGTAGAGTAGTGGTATGAGAATTGCACCATAATTAAATGAGCAAAAAGAAAAGAAAAAAAAAGATACATCAAGCTTTGGCTCAAGAAATATTTAGCATCTTGCATTGGAACAAGCAGAGGCCTGCAATTTTCTTACGATATGTGTTAGCTCACTCACTCCTTTCTCTATTGGAATTTTGTTTATGTAATCCTCTTGAGATTGGAAGTTTAAATCTTCATATTTCTACTTGTTGTACTGAAGGCACAGTAAACAGATAAAAAGGATTTAGACCACGTTGTTCAGTG

mRNA sequence

GTTGAAGATAGCACTTATCCTCTTCAATTCTCTTCCTCAACCACTTCCTGGATTTCCCTCTGTTAAACCCCACAAAGCTCTCCATTAACCATGCAATGGCGGATTCGTCTCTTCACCTCCTCTCCAATGGCGGATTCATCCACCATTCTTCTCCTTCCCCTCTCTTCCCCTCTCTTCCTCGCTCCAGAACCCTCCATTTCCCCGTACTTTCCAATTCCAGAACCTCCTTCATCTTCCCTTCCAAACTCCCTCCTCGCAACCCCGCCATTCCTCCCCTCTCCCCCCCGCTCCCTCCATCTCCCCCTCACACCGACCATCACTCCGACTTTCAGGAGAAAATGCTCTTCCTCGACTCCATTGGCATCGACTTCCTCTCCGTCATCAAAGACCACCCTCCCGTCGCCTCTGCTTCCCTCCCCGACATCAGATCAGCCGTCGATTTCATGACCTCCATGAATTTCACCACCCTCGAACTCCGTCGAATCGTCGGTATGTGCCCTGAGATTCTCACCTCTCGCGCTTCCGTTCTTATCCCTATCTTCACCTTCCTCCTCCGCGAAGCTCGAGTCGACGGTTCCGACATCAAACGCGTTATCAATCGACGCCCTAGATTGTTAGCCTGTAGCGTGAAAGATCAGCTCCGTCCAACTCTCTACTTCCTGCAAAGCATCGGCATATCCGAGGTACATAAACACACATCCTTACTCTCATGTAGCGTTGAAGAGAAACTGATTCCGAGAATCGAGTTCTTCGAGAACTTAGGGTTTTCCCGACGGGATGCTTTGATAATGTTCCGGCGATTCCCGCAGCTGTTTTGCTACAGCATAAAGGAGAATCTGGAACCGAAACTGAATTACTTTGTGGTGGAAATGGGGAGAGAATTGAAAGAATTGAAGGAATTTCCTCACTATTTCTCGTTTAGTTTAGAGAACAGGATCAAGCCAAGACATCAAAGCTGTGTGGAGAAGGGAGTTTGTTTTCCATTGCCGGAGTTGTTGAAAAGCAGCGAAATGAAATTCCGGGAGAAATTGGAGCAATGGGAGTGGGAGTGAGTAGAGTAGTGGTATGAGAATTGCACCATAATTAAATGAGCAAAAAGAAAAGAAAAAAAAAGATACATCAAGCTTTGGCTCAAGAAATATTTAGCATCTTGCATTGGAACAAGCAGAGGCCTGCAATTTTCTTACGATATGTGTTAGCTCACTCACTCCTTTCTCTATTGGAATTTTGTTTATGTAATCCTCTTGAGATTGGAAGTTTAAATCTTCATATTTCTACTTGTTGTACTGAAGGCACAGTAAACAGATAAAAAGGATTTAGACCACGTTGTTCAGTG

Coding sequence (CDS)

ATGGCGGATTCGTCTCTTCACCTCCTCTCCAATGGCGGATTCATCCACCATTCTTCTCCTTCCCCTCTCTTCCCCTCTCTTCCTCGCTCCAGAACCCTCCATTTCCCCGTACTTTCCAATTCCAGAACCTCCTTCATCTTCCCTTCCAAACTCCCTCCTCGCAACCCCGCCATTCCTCCCCTCTCCCCCCCGCTCCCTCCATCTCCCCCTCACACCGACCATCACTCCGACTTTCAGGAGAAAATGCTCTTCCTCGACTCCATTGGCATCGACTTCCTCTCCGTCATCAAAGACCACCCTCCCGTCGCCTCTGCTTCCCTCCCCGACATCAGATCAGCCGTCGATTTCATGACCTCCATGAATTTCACCACCCTCGAACTCCGTCGAATCGTCGGTATGTGCCCTGAGATTCTCACCTCTCGCGCTTCCGTTCTTATCCCTATCTTCACCTTCCTCCTCCGCGAAGCTCGAGTCGACGGTTCCGACATCAAACGCGTTATCAATCGACGCCCTAGATTGTTAGCCTGTAGCGTGAAAGATCAGCTCCGTCCAACTCTCTACTTCCTGCAAAGCATCGGCATATCCGAGGTACATAAACACACATCCTTACTCTCATGTAGCGTTGAAGAGAAACTGATTCCGAGAATCGAGTTCTTCGAGAACTTAGGGTTTTCCCGACGGGATGCTTTGATAATGTTCCGGCGATTCCCGCAGCTGTTTTGCTACAGCATAAAGGAGAATCTGGAACCGAAACTGAATTACTTTGTGGTGGAAATGGGGAGAGAATTGAAAGAATTGAAGGAATTTCCTCACTATTTCTCGTTTAGTTTAGAGAACAGGATCAAGCCAAGACATCAAAGCTGTGTGGAGAAGGGAGTTTGTTTTCCATTGCCGGAGTTGTTGAAAAGCAGCGAAATGAAATTCCGGGAGAAATTGGAGCAATGGGAGTGGGAGTGA

Protein sequence

MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSRTSFIFPSKLPPRNPAIPPLSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSMNFTTLELRRIVGMCPEILTSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDQLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPELLKSSEMKFREKLEQWEWE*

Homology

[Close]

BLAST of CSPI06G25800 vs. ExPASy Swiss-Prot
Match: Q84X53 (Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF1 PE=2 SV=2)

HSP 1 Score: 171.4 bits (433), Expect = 1.6e-41
Identity = 96/241 (39.83%), Postives = 144/241 (59.75%), Query Frame = 0


Query: 78  FQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSMNFTTLELRRIVGMCPEI 137
           F+EK+++L  + +D    ++ +P + SA +  + S    ++S   +   + RI+ M P++
Sbjct: 33  FREKLIYLQDLNVDPHKALRVNPSLRSAPISSVVSVETLLSSTGLSRPAVGRILDMFPDL 92

Query: 138 LTS-RASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDQLRPTLYFLQSIGI-- 197
           LTS   S ++P+  FL  E  +   DI + I+R PRLL  SV  QLRP L FL+++G   
Sbjct: 93  LTSDPESEILPVLRFLSNEISISEQDIPKSISRCPRLLISSVDYQLRPALTFLKTLGFVG 152

Query: 198 --SEVHKHTSLLSCSVEEKLIPRIEFF-ENLGFSRRDALIMFRRFPQLFCYSIKENLEPK 257
             +   ++T LL  +VE  LIP+IE+  E LGF+R +   M  R P L  YS+  NL PK
Sbjct: 153 RDTITSRNTVLLVSNVERTLIPKIEYLEEGLGFTREEVAKMVVRSPALLTYSVDNNLVPK 212

Query: 258 LNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPELLKSSEMKFREK 313
           + +F+ EM  ++KELK FP YFSFSLE +IKPRH+   E G+  PL E+LK S+ +F   
Sbjct: 213 VEFFIEEMRGDVKELKRFPQYFSFSLERKIKPRHRLLKEHGILMPLSEMLKVSDGQFNHW 272

[Close]

BLAST of CSPI06G25800 vs. ExPASy Swiss-Prot
Match: F4JVI3 (Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF5 PE=1 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 2.0e-23
Identity = 71/238 (29.83%), Postives = 123/238 (51.68%), Query Frame = 0


Query: 84  FLDSIGI---DFLSVIKDHPPVASASLPD-IRSAVDFMTSMNFTTLELRRIVGMCPEILT 143
           FL  +GI   D  +++   P +   SL D ++  + F+ ++     +  +I+   P ILT
Sbjct: 238 FLLDLGIPKSDIPTILCKRPQICGISLTDNLKPTMAFLETLGIDKNQWAKIISRFPAILT 297

Query: 144 SRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDQLRPTLYFLQSIGISE--- 203
                L     FL +    +   I R++ R P +++ SV+D+LRPT+ + +S+ +     
Sbjct: 298 YSRQKLTSTVEFLSQTGLTE-EQIGRILTRCPNIMSYSVEDKLRPTMEYFRSLNVDVAVL 357

Query: 204 VHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFV 263
           +H+       S+E  L P  EFF   GF   +  IM  R+  L+ +S+KEN+ PK +YF 
Sbjct: 358 LHRCPQTFGLSIESNLKPVTEFFLEKGFGLDEIGIMISRYGALYTFSLKENVMPKWDYFQ 417

Query: 264 VEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPELLKSSEMKFREKLEQ 315
             M     EL +FP +F +SL+ RIKPR++     GV   L ++L  S ++F + +++
Sbjct: 418 T-MDYPKSELVKFPQFFGYSLQERIKPRYELVQRSGVRLLLNQVLSLSGIEFEKVVKK 473

[Close]

BLAST of CSPI06G25800 vs. ExPASy Swiss-Prot
Match: Q9FM80 (Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF9 PE=2 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 6.1e-20
Identity = 66/244 (27.05%), Postives = 123/244 (50.41%), Query Frame = 0


Query: 79  QEKMLFLDSIGI---DFLSVIKDHPPVASASLP-DIRSAVDFMTSMNFTTLELRRIVGMC 138
           QE++ +L S+G+   D   ++   P +   ++  ++++ + F+  +     ++ +IV   
Sbjct: 220 QERLDYLLSVGVKHRDIKRMLLRQPQILQYTVENNLKAHISFLMGLGIPNSKIGQIVAAT 279

Query: 139 PEILT-SRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDQLRPTLYFL-QSI 198
           P + + S  + L P   +L+ E  +  +D+ +V+   P++L   +         FL + +
Sbjct: 280 PSLFSYSVENSLRPTIRYLIEEVGIKETDVGKVVQLSPQILVQRLDITWNTRYMFLSKEL 339

Query: 199 G------ISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKE 258
           G      +  V KH  LL  S+++  +PRI F  ++G    D L +     Q+   S+++
Sbjct: 340 GAPRDSVVKMVKKHPQLLHYSIDDGFLPRINFLRSIGMCNSDILKVLTSLTQVLSLSLED 399

Query: 259 NLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVE-----KGVCFPLPELL 306
           NL+PK  Y V E+  E+  L ++P Y S SL+ RI+PRH+  VE     KG  FPL  L+
Sbjct: 400 NLKPKYMYLVNELNNEVHILTKYPMYLSLSLDQRIRPRHRFLVELKKVRKGP-FPLSSLV 459

[Close]

BLAST of CSPI06G25800 vs. ExPASy Swiss-Prot
Match: Q9SZL6 (Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF6 PE=2 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 2.4e-16
Identity = 58/227 (25.55%), Postives = 108/227 (47.58%), Query Frame = 0


Query: 94  SVIKDHPPVASASLPD-IRSAVDFMTSMNFTTLELRRIVGMCPEILTSRASVLIPIFTFL 153
           S I   PP+ S S+ + +   + F  ++     +L +++   P +++      + +    
Sbjct: 97  SAITKFPPILSHSVEEKLCPLLAFFQALGVPETQLGKMILFNPRLISYSIDTKLTVIVSF 156

Query: 154 LREARVDGSD-IKRVINRRPRLLACSVKDQLRPTLYFLQ-SIGISE------VHKHTSLL 213
           L    +D    I +V+ + P L+  SV  +LRPT  FL+ S+G+SE      V     LL
Sbjct: 157 LASLGLDQDGMIGKVLVKNPFLMGYSVDKRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLL 216

Query: 214 SCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELK 273
              V + L P  ++ +  GF       M   +PQ+   S+K +L+P++ + V  MGR + 
Sbjct: 217 CRDVNKILKPNYDYLKECGFGDSQIATMVTGYPQILIKSVKNSLQPRIRFLVQVMGRGMD 276

Query: 274 ELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPELLKSSEMKFREK 312
           E+  +P +F   L+ +++ R +   +  +   L E+L  +  KF EK
Sbjct: 277 EVASYPEFFHHGLKKKVESRFKLVKKNNIDCSLREMLDCNTKKFHEK 323

[Close]

BLAST of CSPI06G25800 vs. ExPASy Swiss-Prot
Match: F4IHL3 (Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF2 PE=3 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 7.0e-16
Identity = 59/175 (33.71%), Postives = 93/175 (53.14%), Query Frame = 0


Query: 153 LREARVDGSDIKRVINRRPRLLACSVKDQLRPTLYFLQS-IGISE------VHKHTSLLS 212
           L+E  +    I  ++ + P LL  S+  ++RP + FL +  G+++      +    +LL 
Sbjct: 431 LQEMGIPNEAIGNMLVKFPSLLTNSLYKKIRPVVIFLLTRAGVTQKDIGKVIAMDPALLG 490

Query: 213 CSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKE 272
           CS+  KL P + ++ +LG        M   FP L  Y++ +NL PK  Y    M R L++
Sbjct: 491 CSIGTKLEPNMRYYISLGIRFYQLGEMIADFPMLLRYNV-DNLRPKYRYLRRTMIRPLQD 550

Query: 273 LKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPELLKSSEMKF----REKLEQWE 317
           L EFP +FS+SLE RI PRH   VE  V F L  +L  ++ +F    R+K+E+ E
Sbjct: 551 LIEFPRFFSYSLERRIIPRHTIMVENRVNFKLRYMLACTDEEFERRVRDKVERRE 604

[Close]

BLAST of CSPI06G25800 vs. ExPASy TrEMBL
Match: A0A1S4E3U8 (transcription termination factor MTEF1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC107991918 PE=3 SV=1)

HSP 1 Score: 614.0 bits (1582), Expect = 3.5e-172
Identity = 307/318 (96.54%), Postives = 308/318 (96.86%), Query Frame = 0


Query: 1   MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSRTSFIFPSKLPPRNPAIPP 60
           MADSSLHLLSNGGFI HSSPSPLFPSLPR RTLHFPVLSNSRTSFIFPSKLPPR P IPP
Sbjct: 57  MADSSLHLLSNGGFIRHSSPSPLFPSLPRFRTLHFPVLSNSRTSFIFPSKLPPRVPTIPP 116

Query: 61  LSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM 120
           LS PLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM
Sbjct: 117 LSSPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM 176

Query: 121 NFTTLELRRIVGMCPEILTSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD 180
           NFT LE RRIVGMCPE+LTSRAS LIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD
Sbjct: 177 NFTALEFRRIVGMCPEVLTSRASDLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD 236

Query: 181 QLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLF 240
           QLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGF RRDALIMFRRFPQLF
Sbjct: 237 QLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFCRRDALIMFRRFPQLF 296

Query: 241 CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL 300
           CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
Sbjct: 297 CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL 356

Query: 301 LKSSEMKFREKLEQWEWE 319
           LKSSEMKFREKLE WEWE
Sbjct: 357 LKSSEMKFREKLEPWEWE 374

[Close]

BLAST of CSPI06G25800 vs. ExPASy TrEMBL
Match: A0A5A7SKM3 (Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G001730 PE=3 SV=1)

HSP 1 Score: 602.8 bits (1553), Expect = 8.2e-169
Identity = 303/313 (96.81%), Postives = 304/313 (97.12%), Query Frame = 0


Query: 1   MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSRTSFIFPSKLPPRNPAIPP 60
           MADSSLHLLSNGGFI HSSPSPLFPSLPR RTLHFPVLSNSRTSFIFPSKLPPR P IPP
Sbjct: 45  MADSSLHLLSNGGFIRHSSPSPLFPSLPRFRTLHFPVLSNSRTSFIFPSKLPPRVPTIPP 104

Query: 61  LSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM 120
           LS PLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM
Sbjct: 105 LSSPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM 164

Query: 121 NFTTLELRRIVGMCPEILTSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD 180
           NFT LE RRIVGMCPE+LTSRAS LIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD
Sbjct: 165 NFTALEFRRIVGMCPEVLTSRASDLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD 224

Query: 181 QLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLF 240
           QLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGF RRDALIMFRRFPQLF
Sbjct: 225 QLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFCRRDALIMFRRFPQLF 284

Query: 241 CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL 300
           CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
Sbjct: 285 CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL 344

Query: 301 LKSSEMKFREKLE 314
           LKSSEMKFREKLE
Sbjct: 345 LKSSEMKFREKLE 357

[Close]

BLAST of CSPI06G25800 vs. ExPASy TrEMBL
Match: A0A6J1IAF5 (transcription termination factor MTEF1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111471129 PE=3 SV=1)

HSP 1 Score: 553.5 bits (1425), Expect = 5.7e-154
Identity = 274/316 (86.71%), Postives = 294/316 (93.04%), Query Frame = 0


Query: 1   MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSRTSFIFPSKLPPRNPAIPP 60
           M D++LHLLSNGGF+HHSSPS LFPSL RSRTL FP++SN++T+FI PSKLP R P IPP
Sbjct: 4   MQDTALHLLSNGGFLHHSSPSSLFPSLSRSRTLQFPIISNAKTAFILPSKLPSRAPDIPP 63

Query: 61  LSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM 120
           LSPPLPP P H+   S+FQEKMLFLDSIGIDFLSVIKDHPPVA+ASL DIRSAVDFMTSM
Sbjct: 64  LSPPLPPPPSHSGSRSEFQEKMLFLDSIGIDFLSVIKDHPPVATASLADIRSAVDFMTSM 123

Query: 121 NFTTLELRRIVGMCPEILTSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD 180
           NFT +E RRIVGMCPEILTSR S ++P+FTFLLREARVDGSDIKRVINRRPRLLACSVK+
Sbjct: 124 NFTAVEFRRIVGMCPEILTSRVSDIVPVFTFLLREARVDGSDIKRVINRRPRLLACSVKN 183

Query: 181 QLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLF 240
           +LRPT+YFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDA+IMFRRFPQLF
Sbjct: 184 RLRPTMYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDAVIMFRRFPQLF 243

Query: 241 CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL 300
           C SIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQ CVEKGVCFPLP L
Sbjct: 244 CCSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQICVEKGVCFPLPVL 303

Query: 301 LKSSEMKFREKLEQWE 317
           LK+SEMKFREKLE WE
Sbjct: 304 LKTSEMKFREKLEPWE 319

[Close]

BLAST of CSPI06G25800 vs. ExPASy TrEMBL
Match: A0A6J1HHJ6 (transcription termination factor MTEF1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111463541 PE=3 SV=1)

HSP 1 Score: 543.9 bits (1400), Expect = 4.5e-151
Identity = 272/316 (86.08%), Postives = 291/316 (92.09%), Query Frame = 0


Query: 1   MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSRTSFIFPSKLPPRNPAIPP 60
           M D++LHLLSNGGF+HHSSPS LFPSL RSRTL FP + N++ +FI PSKLP R P IPP
Sbjct: 4   MQDTALHLLSNGGFLHHSSPSSLFPSLSRSRTLQFPTI-NAKIAFILPSKLPSRAPDIPP 63

Query: 61  LSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM 120
           LSPPLPP P H+   S+FQEKMLFLDSIGIDFLSVIKDHPPVA+ASL DIRSAVDFMTSM
Sbjct: 64  LSPPLPPPPSHSGSRSEFQEKMLFLDSIGIDFLSVIKDHPPVATASLADIRSAVDFMTSM 123

Query: 121 NFTTLELRRIVGMCPEILTSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD 180
           NFT +E RRIVGMCPEILTSR S ++P+FTFLLREARVDGSDIKRVINRRPRLLACSVK+
Sbjct: 124 NFTAVEFRRIVGMCPEILTSRVSDIVPVFTFLLREARVDGSDIKRVINRRPRLLACSVKN 183

Query: 181 QLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLF 240
           +LRPT+YFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDA+IMFRRFPQLF
Sbjct: 184 RLRPTMYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDAVIMFRRFPQLF 243

Query: 241 CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL 300
           C SIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQ CVEKGVCFPLP L
Sbjct: 244 CCSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQICVEKGVCFPLPVL 303

Query: 301 LKSSEMKFREKLEQWE 317
           LK+SEMKFREKLE WE
Sbjct: 304 LKTSEMKFREKLEPWE 318

[Close]

BLAST of CSPI06G25800 vs. ExPASy TrEMBL
Match: A0A0A0KKL6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G454440 PE=3 SV=1)

HSP 1 Score: 520.4 bits (1339), Expect = 5.3e-144
Identity = 271/313 (86.58%), Postives = 271/313 (86.58%), Query Frame = 0


Query: 1   MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSRTSFIFPSKLPPRNPAIPP 60
           MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSRTSFIFPSKLPPRNPAIPP
Sbjct: 1   MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSRTSFIFPSKLPPRNPAIPP 60

Query: 61  LSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM 120
           LSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM
Sbjct: 61  LSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM 120

Query: 121 NFTTLELRRIVGMCPEILTSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD 180
           NFTTLELRRIVGMCPEILTSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD
Sbjct: 121 NFTTLELRRIVGMCPEILTSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD 180

Query: 181 QLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLF 240
           QLRPTLYFLQSIGISE                                          LF
Sbjct: 181 QLRPTLYFLQSIGISE------------------------------------------LF 240

Query: 241 CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL 300
           CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
Sbjct: 241 CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL 271

Query: 301 LKSSEMKFREKLE 314
           LKSSEMKFREKLE
Sbjct: 301 LKSSEMKFREKLE 271

[Close]

BLAST of CSPI06G25800 vs. NCBI nr
Match: KAE8647430.1 (hypothetical protein Csa_003511 [Cucumis sativus])

HSP 1 Score: 638.3 bits (1645), Expect = 3.6e-179
Identity = 318/318 (100.00%), Postives = 318/318 (100.00%), Query Frame = 0


Query: 1   MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSRTSFIFPSKLPPRNPAIPP 60
           MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSRTSFIFPSKLPPRNPAIPP
Sbjct: 1   MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSRTSFIFPSKLPPRNPAIPP 60

Query: 61  LSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM 120
           LSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM
Sbjct: 61  LSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM 120

Query: 121 NFTTLELRRIVGMCPEILTSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD 180
           NFTTLELRRIVGMCPEILTSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD
Sbjct: 121 NFTTLELRRIVGMCPEILTSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD 180

Query: 181 QLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLF 240
           QLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLF
Sbjct: 181 QLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLF 240

Query: 241 CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL 300
           CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
Sbjct: 241 CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL 300

Query: 301 LKSSEMKFREKLEQWEWE 319
           LKSSEMKFREKLEQWEWE
Sbjct: 301 LKSSEMKFREKLEQWEWE 318

[Close]

BLAST of CSPI06G25800 vs. NCBI nr
Match: XP_011657726.1 (transcription factor E2FA isoform X1 [Cucumis sativus])

HSP 1 Score: 625.2 bits (1611), Expect = 3.2e-175
Identity = 313/314 (99.68%), Postives = 314/314 (100.00%), Query Frame = 0


Query: 1   MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSRTSFIFPSKLPPRNPAIPP 60
           MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSRTSFIFPSKLPPRNPAIPP
Sbjct: 1   MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSRTSFIFPSKLPPRNPAIPP 60

Query: 61  LSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM 120
           LSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM
Sbjct: 61  LSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM 120

Query: 121 NFTTLELRRIVGMCPEILTSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD 180
           NFTTLELRRIVGMCPEILTSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD
Sbjct: 121 NFTTLELRRIVGMCPEILTSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD 180

Query: 181 QLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLF 240
           QLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLF
Sbjct: 181 QLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLF 240

Query: 241 CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL 300
           CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
Sbjct: 241 CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL 300

Query: 301 LKSSEMKFREKLEQ 315
           LKSSEMKFREKLE+
Sbjct: 301 LKSSEMKFREKLEK 314

[Close]

BLAST of CSPI06G25800 vs. NCBI nr
Match: XP_011657727.1 (transcription factor E2FA isoform X2 [Cucumis sativus])

HSP 1 Score: 625.2 bits (1611), Expect = 3.2e-175
Identity = 313/314 (99.68%), Postives = 314/314 (100.00%), Query Frame = 0


Query: 1   MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSRTSFIFPSKLPPRNPAIPP 60
           MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSRTSFIFPSKLPPRNPAIPP
Sbjct: 1   MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSRTSFIFPSKLPPRNPAIPP 60

Query: 61  LSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM 120
           LSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM
Sbjct: 61  LSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM 120

Query: 121 NFTTLELRRIVGMCPEILTSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD 180
           NFTTLELRRIVGMCPEILTSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD
Sbjct: 121 NFTTLELRRIVGMCPEILTSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD 180

Query: 181 QLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLF 240
           QLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLF
Sbjct: 181 QLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLF 240

Query: 241 CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL 300
           CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
Sbjct: 241 CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL 300

Query: 301 LKSSEMKFREKLEQ 315
           LKSSEMKFREKLE+
Sbjct: 301 LKSSEMKFREKLEK 314

[Close]

BLAST of CSPI06G25800 vs. NCBI nr
Match: XP_016902903.1 (PREDICTED: transcription termination factor MTEF1, chloroplastic [Cucumis melo])

HSP 1 Score: 614.0 bits (1582), Expect = 7.3e-172
Identity = 307/318 (96.54%), Postives = 308/318 (96.86%), Query Frame = 0


Query: 1   MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSRTSFIFPSKLPPRNPAIPP 60
           MADSSLHLLSNGGFI HSSPSPLFPSLPR RTLHFPVLSNSRTSFIFPSKLPPR P IPP
Sbjct: 57  MADSSLHLLSNGGFIRHSSPSPLFPSLPRFRTLHFPVLSNSRTSFIFPSKLPPRVPTIPP 116

Query: 61  LSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM 120
           LS PLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM
Sbjct: 117 LSSPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM 176

Query: 121 NFTTLELRRIVGMCPEILTSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD 180
           NFT LE RRIVGMCPE+LTSRAS LIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD
Sbjct: 177 NFTALEFRRIVGMCPEVLTSRASDLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD 236

Query: 181 QLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLF 240
           QLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGF RRDALIMFRRFPQLF
Sbjct: 237 QLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFCRRDALIMFRRFPQLF 296

Query: 241 CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL 300
           CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
Sbjct: 297 CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL 356

Query: 301 LKSSEMKFREKLEQWEWE 319
           LKSSEMKFREKLE WEWE
Sbjct: 357 LKSSEMKFREKLEPWEWE 374

[Close]

BLAST of CSPI06G25800 vs. NCBI nr
Match: XP_038883667.1 (transcription termination factor MTEF1, chloroplastic isoform X2 [Benincasa hispida])

HSP 1 Score: 605.1 bits (1559), Expect = 3.4e-169
Identity = 302/319 (94.67%), Postives = 308/319 (96.55%), Query Frame = 0


Query: 1   MAD-SSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSRTSFIFPSKLPPRNPAIP 60
           MAD SSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSR +F+FPSKLPPRNP I 
Sbjct: 1   MADSSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSRIAFVFPSKLPPRNPTIL 60

Query: 61  PLSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTS 120
           PLSPPLPP PPH DHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTS
Sbjct: 61  PLSPPLPPPPPHNDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTS 120

Query: 121 MNFTTLELRRIVGMCPEILTSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVK 180
           MNFT LE RRIVGMCPEILTS AS L+PIFTFLLREARVDGSDIKRVINRRPRLLACSVK
Sbjct: 121 MNFTALEFRRIVGMCPEILTSPASDLVPIFTFLLREARVDGSDIKRVINRRPRLLACSVK 180

Query: 181 DQLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQL 240
           D+LRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQL
Sbjct: 181 DRLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQL 240

Query: 241 FCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPE 300
           FCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPE
Sbjct: 241 FCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPE 300

Query: 301 LLKSSEMKFREKLEQWEWE 319
           LLK+SEMKFR+KLE WEWE
Sbjct: 301 LLKTSEMKFRQKLEPWEWE 319

[Close]

BLAST of CSPI06G25800 vs. TAIR 10
Match: AT2G36000.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 313.2 bits (801), Expect = 2.5e-85
Identity = 174/323 (53.87%), Postives = 221/323 (68.42%), Query Frame = 0


Query: 1   MADSSLHLLSNG-GFIHHSSPSPLFPSLPRSRTLHFPVLS-----NSRTSFIFPSKLPPR 60
           M   +L  LS+    +HH+     FPSL R R  +FP LS     +S +S  F      +
Sbjct: 1   MQQEALSFLSSSLPSLHHN-----FPSLSRLRFNNFPALSFKPNTSSSSSSFF------K 60

Query: 61  NPAIPPLSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAV 120
           +P IP LS     +       S   EK+++LDS+GIDFL++I  HPP+ S +L  + S V
Sbjct: 61  SPDIPSLSSTTTTTTTTETLESSIHEKLIYLDSLGIDFLTLINRHPPLLSTALSAVESVV 120

Query: 121 DFMTS--MNFTTLELRRIVGMCPEILTS-RASVLIPIFTFLLREARVDG-SDIKRVINRR 180
           D+MT+  +NFT  + RR+V MCPE+LTS   S  IP+ TFLLRE  VD   D+++ + RR
Sbjct: 121 DYMTTPPINFTLQDFRRLVSMCPELLTSPLTSHTIPVITFLLREVGVDSIFDLRQALRRR 180

Query: 181 PRLLACSVKDQLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDAL 240
           PRLLACSV  QLRPTLYFLQ IGI + HKHT LLSCSV+ KL+PRI++FE LGFSRR A 
Sbjct: 181 PRLLACSVDHQLRPTLYFLQRIGILDPHKHTYLLSCSVDNKLVPRIDYFEKLGFSRRSAT 240

Query: 241 IMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVE 300
            MF+RFPQLF YSI EN EPKL Y +VEMGR+++E+ EFP YFSFSLENRIKPRH++C  
Sbjct: 241 AMFKRFPQLFNYSIAENYEPKLKYLMVEMGRDVREVLEFPQYFSFSLENRIKPRHEACAA 300

Query: 301 KGVCFPLPELLKSSEMKFREKLE 314
           KGV FPLP +LK++E  FR+ LE
Sbjct: 301 KGVRFPLPVMLKTNEAGFRDTLE 312

[Close]

BLAST of CSPI06G25800 vs. TAIR 10
Match: AT2G36000.2 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 313.2 bits (801), Expect = 2.5e-85
Identity = 174/323 (53.87%), Postives = 221/323 (68.42%), Query Frame = 0


Query: 1   MADSSLHLLSNG-GFIHHSSPSPLFPSLPRSRTLHFPVLS-----NSRTSFIFPSKLPPR 60
           M   +L  LS+    +HH+     FPSL R R  +FP LS     +S +S  F      +
Sbjct: 1   MQQEALSFLSSSLPSLHHN-----FPSLSRLRFNNFPALSFKPNTSSSSSSFF------K 60

Query: 61  NPAIPPLSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAV 120
           +P IP LS     +       S   EK+++LDS+GIDFL++I  HPP+ S +L  + S V
Sbjct: 61  SPDIPSLSSTTTTTTTTETLESSIHEKLIYLDSLGIDFLTLINRHPPLLSTALSAVESVV 120

Query: 121 DFMTS--MNFTTLELRRIVGMCPEILTS-RASVLIPIFTFLLREARVDG-SDIKRVINRR 180
           D+MT+  +NFT  + RR+V MCPE+LTS   S  IP+ TFLLRE  VD   D+++ + RR
Sbjct: 121 DYMTTPPINFTLQDFRRLVSMCPELLTSPLTSHTIPVITFLLREVGVDSIFDLRQALRRR 180

Query: 181 PRLLACSVKDQLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDAL 240
           PRLLACSV  QLRPTLYFLQ IGI + HKHT LLSCSV+ KL+PRI++FE LGFSRR A 
Sbjct: 181 PRLLACSVDHQLRPTLYFLQRIGILDPHKHTYLLSCSVDNKLVPRIDYFEKLGFSRRSAT 240

Query: 241 IMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVE 300
            MF+RFPQLF YSI EN EPKL Y +VEMGR+++E+ EFP YFSFSLENRIKPRH++C  
Sbjct: 241 AMFKRFPQLFNYSIAENYEPKLKYLMVEMGRDVREVLEFPQYFSFSLENRIKPRHEACAA 300

Query: 301 KGVCFPLPELLKSSEMKFREKLE 314
           KGV FPLP +LK++E  FR+ LE
Sbjct: 301 KGVRFPLPVMLKTNEAGFRDTLE 312

[Close]

BLAST of CSPI06G25800 vs. TAIR 10
Match: AT2G34620.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 194.9 bits (494), Expect = 9.9e-50
Identity = 105/239 (43.93%), Postives = 157/239 (65.69%), Query Frame = 0


Query: 79  QEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSMNFTTLELRRIVGMCPEIL 138
           +EK+L L+ +GID    +  +P + SA L  I+S + F+ S      +L RI+GMCP+IL
Sbjct: 56  KEKILCLELMGIDSGKALSLNPCLCSAPLDSIQSVLHFLQSKGIYPNDLPRILGMCPKIL 115

Query: 139 TSRA-SVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDQLRPTLYFLQSIGISEV 198
           TS   + L P+F FL  +  V  +  +RVI + PRLL  SV+DQL+P L++LQ +G+ ++
Sbjct: 116 TSDVRTELYPVFMFLSNDLHVPENAFRRVIKKCPRLLISSVEDQLKPALFYLQRLGLKDL 175

Query: 199 ----HKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLN 258
               ++   LL  SVE  LIP++ F E++GFSR +A+ M  R P LF +SI+ N +PKL+
Sbjct: 176 EALAYQDPILLVSSVEHTLIPKLRFLESIGFSRPEAIGMILRCPALFTFSIENNFKPKLD 235

Query: 259 YFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPELLKSSEMKFREKL 313
           YF+ E+  +L+ LKEFP YF+FSLE RIKPRH   +E+G+  PL  +LKS++ +F + L
Sbjct: 236 YFMSEIKGKLENLKEFPQYFAFSLEKRIKPRHLESMERGLELPLSLMLKSTDEEFEQLL 294

[Close]

BLAST of CSPI06G25800 vs. TAIR 10
Match: AT2G03050.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 171.4 bits (433), Expect = 1.2e-42
Identity = 96/241 (39.83%), Postives = 144/241 (59.75%), Query Frame = 0


Query: 78  FQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSMNFTTLELRRIVGMCPEI 137
           F+EK+++L  + +D    ++ +P + SA +  + S    ++S   +   + RI+ M P++
Sbjct: 32  FREKLIYLQDLNVDPHKALRVNPSLRSAPISSVVSVETLLSSTGLSRPAVGRILDMFPDL 91

Query: 138 LTS-RASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDQLRPTLYFLQSIGI-- 197
           LTS   S ++P+  FL  E  +   DI + I+R PRLL  SV  QLRP L FL+++G   
Sbjct: 92  LTSDPESEILPVLRFLSNEISISEQDIPKSISRCPRLLISSVDYQLRPALTFLKTLGFVG 151

Query: 198 --SEVHKHTSLLSCSVEEKLIPRIEFF-ENLGFSRRDALIMFRRFPQLFCYSIKENLEPK 257
             +   ++T LL  +VE  LIP+IE+  E LGF+R +   M  R P L  YS+  NL PK
Sbjct: 152 RDTITSRNTVLLVSNVERTLIPKIEYLEEGLGFTREEVAKMVVRSPALLTYSVDNNLVPK 211

Query: 258 LNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPELLKSSEMKFREK 313
           + +F+ EM  ++KELK FP YFSFSLE +IKPRH+   E G+  PL E+LK S+ +F   
Sbjct: 212 VEFFIEEMRGDVKELKRFPQYFSFSLERKIKPRHRLLKEHGILMPLSEMLKVSDGQFNHW 271

[Close]

BLAST of CSPI06G25800 vs. TAIR 10
Match: AT3G18870.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 132.5 bits (332), Expect = 6.0e-31
Identity = 87/260 (33.46%), Postives = 140/260 (53.85%), Query Frame = 0


Query: 62  SPPLPPS--PPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVA--SASLPDIRSAVDFM 121
           SPP P S  P +    +  +E +  L S+GI     +  +P +A  +  L  I SAV+ +
Sbjct: 18  SPPSPSSSKPLYLKFQTSHRENLRHLSSLGI-----VPQNPRLAPPANDLSVILSAVNLL 77

Query: 122 TSMNFTTLELRRIVGMCPEIL--TSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLA 181
            S   +  +  R+V +CP++   T   S L P+F FL  E      + + +I   P +L 
Sbjct: 78  KSKGISDEDFPRLVFLCPQLFSPTFDISKLDPVFDFLTGELGASAEESRGLIVNCPNILF 137

Query: 182 CSVKDQLRPTLYFLQSIGISEVHK----HTSLLSCSVEEKLIPRIEFFENLGFSRRDALI 241
             V+  LRPTL +L+ +G+  +++    +  +L+  V EKL  ++ F +++GF   +A  
Sbjct: 138 SDVEYCLRPTLVYLKELGVRNLNRASKTNAHVLNTRV-EKLRAKMRFLKSIGFEHEEAAR 197

Query: 242 MFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEK 301
           +  R P +F YS+++NL PK  + V +M REL+ELK+FP YF+FSL  RI+PRH    +K
Sbjct: 198 VCGRIPAIFGYSVEDNLRPKFEFLVYDMERELEELKKFPQYFAFSLGKRIRPRHWHLKKK 257

Query: 302 GVCFPLPELLKSSEMKFREK 312
            V   L  +L   + KF  K
Sbjct: 258 NVRVSLSRMLMWGDQKFYSK 271

The following BLAST results are available for this feature:

BLAST of CSPI06G25800 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84X53	1.6e-41	39.83	Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX...	[more]
F4JVI3	2.0e-23	29.83	Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q9FM80	6.1e-20	27.05	Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q9SZL6	2.4e-16	25.55	Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidop...	[more]
F4IHL3	7.0e-16	33.71	Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana O...	[more]

BLAST of CSPI06G25800 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E3U8	3.5e-172	96.54	transcription termination factor MTEF1, chloroplastic OS=Cucumis melo OX=3656 GN...	[more]
A0A5A7SKM3	8.2e-169	96.81	Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A6J1IAF5	5.7e-154	86.71	transcription termination factor MTEF1, chloroplastic OS=Cucurbita maxima OX=366...	[more]
A0A6J1HHJ6	4.5e-151	86.08	transcription termination factor MTEF1, chloroplastic OS=Cucurbita moschata OX=3...	[more]
A0A0A0KKL6	5.3e-144	86.58	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G454440 PE=3 SV=1	[more]

BLAST of CSPI06G25800 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8647430.1	3.6e-179	100.00	hypothetical protein Csa_003511 [Cucumis sativus]	[more]
XP_011657726.1	3.2e-175	99.68	transcription factor E2FA isoform X1 [Cucumis sativus]	[more]
XP_011657727.1	3.2e-175	99.68	transcription factor E2FA isoform X2 [Cucumis sativus]	[more]
XP_016902903.1	7.3e-172	96.54	PREDICTED: transcription termination factor MTEF1, chloroplastic [Cucumis melo]	[more]
XP_038883667.1	3.4e-169	94.67	transcription termination factor MTEF1, chloroplastic isoform X2 [Benincasa hisp...	[more]

BLAST of CSPI06G25800 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G36000.1	2.5e-85	53.87	Mitochondrial transcription termination factor family protein	[more]
AT2G36000.2	2.5e-85	53.87	Mitochondrial transcription termination factor family protein	[more]
AT2G34620.1	9.9e-50	43.93	Mitochondrial transcription termination factor family protein	[more]
AT2G03050.1	1.2e-42	39.83	Mitochondrial transcription termination factor family protein	[more]
AT3G18870.1	6.0e-31	33.46	Mitochondrial transcription termination factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 230..262 e-value: 2.0E-5 score: 34.0 coord: 263..294 e-value: 0.0022 score: 27.2 coord: 128..159 e-value: 9.7 score: 15.1 coord: 93..123 e-value: 240.0 score: 8.7 coord: 196..225 e-value: 0.011 score: 24.9 coord: 164..195 e-value: 3.1E-5 score: 33.4
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 153..308 e-value: 1.9E-34 score: 119.0 coord: 79..156 e-value: 1.6E-5 score: 24.0
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 66..314
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 142..317 e-value: 1.8E-38 score: 134.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..76
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..71
None	No IPR available	PANTHER	PTHR13068:SF46	OS03G0360600 PROTEIN	coord: 66..314

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G25800.1	CSPI06G25800.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006353	DNA-templated transcription, termination
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003690	double-stranded DNA binding