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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGGTGAGAAAGTGGAAGAAGGAGAGAAGAGTAAAAGGGGGGGGAGGGAGAAAAACGACAAGTCGGCAATGATCGATAAAAAACGGGAACGCAGCATCGACGTAACAAGCCAACAGATTAGGGGAAGAAACAAATGGAAAAGGAAAGCTGAGGTGGGACCTTCCTACACGTGGCCACTCAATGCCAAAGTGGTGAGGTCAAGTGGGACCACCCAAAGACAAGTAAATGAAGAACCGTTGATTTGGCTGACGGTGAGATGA mRNA sequence ATGGGTGAGAAAGTGGAAGAAGGAGAGAAGAGTAAAAGGGGGGGGAGGGAGAAAAACGACAAGTCGGCAATGATCGATAAAAAACGGGAACGCAGCATCGACGTAACAAGCCAACAGATTAGGGGAAGAAACAAATGGAAAAGGAAAGCTGAGGTGGGACCTTCCTACACGTGGCCACTCAATGCCAAAGTGGTGAGGTCAAGTGGGACCACCCAAAGACAAGTAAATGAAGAACCGTTGATTTGGCTGACGGTGAGATGA Coding sequence (CDS) ATGGGTGAGAAAGTGGAAGAAGGAGAGAAGAGTAAAAGGGGGGGGAGGGAGAAAAACGACAAGTCGGCAATGATCGATAAAAAACGGGAACGCAGCATCGACGTAACAAGCCAACAGATTAGGGGAAGAAACAAATGGAAAAGGAAAGCTGAGGTGGGACCTTCCTACACGTGGCCACTCAATGCCAAAGTGGTGAGGTCAAGTGGGACCACCCAAAGACAAGTAAATGAAGAACCGTTGATTTGGCTGACGGTGAGATGA Protein sequence MGEKVEEGEKSKRGGREKNDKSAMIDKKRERSIDVTSQQIRGRNKWKRKAEVGPSYTWPLNAKVVRSSGTTQRQVNEEPLIWLTVR*
Homology
BLAST of CSPI06G24410 vs. ExPASy TrEMBL
Match: A0A0A0KK67 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G445200 PE=4 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 4.2e-27 Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0
Query: 24 MIDKKRERSIDVTSQQIRGRNKWKRKAEVGPSYTWPLNAKVVRSSGTTQRQVNEEPLIWL 83
MIDKKRERSIDVTSQQIRGRNKWKRKAEVGPSYTWPLNAKVVRSSGTTQRQVNEEPLIWL
Sbjct: 1 MIDKKRERSIDVTSQQIRGRNKWKRKAEVGPSYTWPLNAKVVRSSGTTQRQVNEEPLIWL 60
Query: 84 TVR 87
TVR
Sbjct: 61 TVR 63
BLAST of CSPI06G24410 vs. NCBI nr
Match: KGN48156.1 (hypothetical protein Csa_004099 [Cucumis sativus]) HSP 1 Score: 130.2 bits (326), Expect = 8.8e-27 Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0
Query: 24 MIDKKRERSIDVTSQQIRGRNKWKRKAEVGPSYTWPLNAKVVRSSGTTQRQVNEEPLIWL 83
MIDKKRERSIDVTSQQIRGRNKWKRKAEVGPSYTWPLNAKVVRSSGTTQRQVNEEPLIWL
Sbjct: 1 MIDKKRERSIDVTSQQIRGRNKWKRKAEVGPSYTWPLNAKVVRSSGTTQRQVNEEPLIWL 60
Query: 84 TVR 87
TVR
Sbjct: 61 TVR 63
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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| A0A0A0KK67 | 4.2e-27 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G445200 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KGN48156.1 | 8.8e-27 | 100.00 | hypothetical protein Csa_004099 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
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| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..36 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..51 |
Relationships
The following mRNA feature(s) are a part of this gene:
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