CSPI06G22560 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI06G22560
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Location	Chr6: 20409014 .. 20409661 (+)
RNA-Seq Expression	CSPI06G22560
Synteny	CSPI06G22560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGTAAGTGAGGAATGTCGAGATGAAGAGCATAATGTCAATAGTAAGACGAACAAACTACAATATGGCTTCATATGTAAGTATGTTACAATTTTATTCGTGCTGGCCGTGATCATGGCTTCATGCGCTCTCTGGCTTGCCTACCGCCCCAAGAACCCCGAGTTTGCAGTGGTCGAGGCTGTGATATACAACTTGACCGTGTCGCCTCCATCGCAGCTTTTGACAACAATGGCATGCACCATTGTTACAAGGAACCCCAACAAGCTCTCTTCCATTTACTATGACCAATTAACTGGGGTGGTGTTGTATAAGGATCAACAGATAACACCACAGGTAATGTTGTCTCCGGTGATTAACGAAAAGAAGACCACCGTGGAGATACCACTGAAGATTAGTGGTGCAGCGGTGTCCGCGGTGTCGGTGACGGAGGAGTTGGCAAATGAGATAGTGAGAAGTACTGAGAGTGGGTTGTTTTGGCTTAGAGTTGTGTTGATGGGAAGAGTTAAATGGAAACTTGGAGGTGTGAGAATTGGTTATTATGCTCTTTCTGTTAAATGTGATGTGTTGGTCACTAACACAAAGGATGACTCGGTTGGTTCACTTCCCTCCCCTCGTTCGACTACATGTAACGTCGATTTTGCTTAA

mRNA sequence

ATGGAAGTAAGTGAGGAATGTCGAGATGAAGAGCATAATGTCAATAGTAAGACGAACAAACTACAATATGGCTTCATATGTAAGTATGTTACAATTTTATTCGTGCTGGCCGTGATCATGGCTTCATGCGCTCTCTGGCTTGCCTACCGCCCCAAGAACCCCGAGTTTGCAGTGGTCGAGGCTGTGATATACAACTTGACCGTGTCGCCTCCATCGCAGCTTTTGACAACAATGGCATGCACCATTGTTACAAGGAACCCCAACAAGCTCTCTTCCATTTACTATGACCAATTAACTGGGGTGGTGTTGTATAAGGATCAACAGATAACACCACAGGTAATGTTGTCTCCGGTGATTAACGAAAAGAAGACCACCGTGGAGATACCACTGAAGATTAGTGGTGCAGCGGTGTCCGCGGTGTCGGTGACGGAGGAGTTGGCAAATGAGATAGTGAGAAGTACTGAGAGTGGGTTGTTTTGGCTTAGAGTTGTGTTGATGGGAAGAGTTAAATGGAAACTTGGAGGTGTGAGAATTGGTTATTATGCTCTTTCTGTTAAATGTGATGTGTTGGTCACTAACACAAAGGATGACTCGGTTGGTTCACTTCCCTCCCCTCGTTCGACTACATGTAACGTCGATTTTGCTTAA

Coding sequence (CDS)

ATGGAAGTAAGTGAGGAATGTCGAGATGAAGAGCATAATGTCAATAGTAAGACGAACAAACTACAATATGGCTTCATATGTAAGTATGTTACAATTTTATTCGTGCTGGCCGTGATCATGGCTTCATGCGCTCTCTGGCTTGCCTACCGCCCCAAGAACCCCGAGTTTGCAGTGGTCGAGGCTGTGATATACAACTTGACCGTGTCGCCTCCATCGCAGCTTTTGACAACAATGGCATGCACCATTGTTACAAGGAACCCCAACAAGCTCTCTTCCATTTACTATGACCAATTAACTGGGGTGGTGTTGTATAAGGATCAACAGATAACACCACAGGTAATGTTGTCTCCGGTGATTAACGAAAAGAAGACCACCGTGGAGATACCACTGAAGATTAGTGGTGCAGCGGTGTCCGCGGTGTCGGTGACGGAGGAGTTGGCAAATGAGATAGTGAGAAGTACTGAGAGTGGGTTGTTTTGGCTTAGAGTTGTGTTGATGGGAAGAGTTAAATGGAAACTTGGAGGTGTGAGAATTGGTTATTATGCTCTTTCTGTTAAATGTGATGTGTTGGTCACTAACACAAAGGATGACTCGGTTGGTTCACTTCCCTCCCCTCGTTCGACTACATGTAACGTCGATTTTGCTTAA

Protein sequence

MEVSEECRDEEHNVNSKTNKLQYGFICKYVTILFVLAVIMASCALWLAYRPKNPEFAVVEAVIYNLTVSPPSQLLTTMACTIVTRNPNKLSSIYYDQLTGVVLYKDQQITPQVMLSPVINEKKTTVEIPLKISGAAVSAVSVTEELANEIVRSTESGLFWLRVVLMGRVKWKLGGVRIGYYALSVKCDVLVTNTKDDSVGSLPSPRSTTCNVDFA*

Homology

[Close]

BLAST of CSPI06G22560 vs. ExPASy Swiss-Prot
Match: Q9FI03 (NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.1e-15
Identity = 58/201 (28.86%), Postives = 100/201 (49.75%), Query Frame = 0


Query: 13  NVNSKTNKLQYGFICKYVTILFVLAVIMASCALWLAYRPKNPEFAVVEAVIY--NLTVSP 72
           N+N++  KL + F   +  +L ++ ++      WL   P+ PEF++ EA IY  NLT S 
Sbjct: 19  NINNRHKKLFFTFSTFFSGLLLIIFLV------WLILHPERPEFSLTEADIYSLNLTTSS 78

Query: 73  PSQLLTTMACTIVTRNPNKLSSIYYDQLTGVVLYKDQQITPQVMLSPVINEKKTTVEIPL 132
              L +++  T+ ++NPNK   IYYD+L     Y+ QQIT +  L P     +   EI L
Sbjct: 79  THLLNSSVQLTLFSKNPNKKVGIYYDKLLVYAAYRGQQITSEASLPPFYQSHE---EINL 138

Query: 133 KISGAAVSAVSVTEELANEIVRSTESGLFWLRVVLMGRVKWKLGGVRIGYYALSVKCDVL 192
             +    + + V +    +I R   +G   + + + G+++WK+G    G Y  +V C  +
Sbjct: 139 LTAFLQGTELPVAQSFGYQISRERSTGKIIIGMKMDGKLRWKIGTWVSGAYRFNVNCLAI 198

Query: 193 VTNTKDDSVGSLPSPRSTTCN 212
           V    + +   L S + T C+
Sbjct: 199 VAFGMNMTTPPLASLQGTRCS 210

[Close]

BLAST of CSPI06G22560 vs. ExPASy Swiss-Prot
Match: Q9SJ54 (NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana OX=3702 GN=NHL12 PE=2 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 3.2e-12
Identity = 52/172 (30.23%), Postives = 81/172 (47.09%), Query Frame = 0


Query: 30  VTILFVLAVIMASCALWLAYRPKNPEFAVVEAVIYNLTVSPPSQLLTTMACTIVTRNPNK 89
           V I F++ V++    +W+  +P  P F + +A +Y   +S P+ L +    TI +RN N 
Sbjct: 24  VIIGFIIIVLITIFLVWIILQPTKPRFILQDATVYAFNLSQPNLLTSNFQITIASRNRNS 83

Query: 90  LSSIYYDQLTGVVLYKDQQITPQVMLSPVI-NEKKTTVEIPLKISGAAVSAVSVTEELAN 149
              IYYD+L     Y++QQIT +  + P     K+  V  P     +   A      L +
Sbjct: 84  RIGIYYDRLHVYATYRNQQITLRTAIPPTYQGHKEDNVWSPFVYGNSVPIAPFNAVALGD 143

Query: 150 EIVRSTESGLFWLRVVLMGRVKWKLGGVRIGYYALSVKCDVLVTNTKDDSVG 201
           E  R    G   L +   GRV+WK+G +  G Y L V+C   + N  D + G
Sbjct: 144 EQNR----GFVTLIIRADGRVRWKVGTLITGKYHLHVRCQAFI-NLADKAAG 190

[Close]

BLAST of CSPI06G22560 vs. ExPASy Swiss-Prot
Match: Q9SRN0 (NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=NHL1 PE=2 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 9.2e-12
Identity = 53/166 (31.93%), Postives = 80/166 (48.19%), Query Frame = 0


Query: 31  TILFVLAVIMASCAL-WLAYRPKNPEFAVVEAVIY--NLTVSPPSQLLTTMACTIVTRNP 90
           +I+FVL +I  +  L W   +P  P F + +A +Y  N++ +PP+ L +    T+ +RNP
Sbjct: 21  SIIFVLFIIFLTILLIWAILQPSKPRFILQDATVYAFNVSGNPPNLLTSNFQITLSSRNP 80

Query: 91  NKLSSIYYDQLTGVVLYKDQQITPQVMLSPVINEKKTTVEIPLKISGAAVSAVSVTEELA 150
           N    IYYD+L     Y+ QQIT    + P     K      + I    V   SV     
Sbjct: 81  NNKIGIYYDRLDVYATYRSQQITFPTSIPPTYQGHK-----DVDIWSPFVYGTSVPIAPF 140

Query: 151 NEIVRST--ESGLFWLRVVLMGRVKWKLGGVRIGYYALSVKCDVLV 192
           N +   T  ++G+  L +   GRV+WK+G    G Y L VKC   +
Sbjct: 141 NGVSLDTDKDNGVVLLIIRADGRVRWKVGTFITGKYHLHVKCPAYI 181

[Close]

BLAST of CSPI06G22560 vs. ExPASy Swiss-Prot
Match: Q9FNH6 (NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 3.0e-10
Identity = 48/185 (25.95%), Postives = 86/185 (46.49%), Query Frame = 0


Query: 32  ILFVLAVIMASCAL--WLAYRPKNPEFAVVEAVIYNLTVSPPSQLLTTMACTIVTRNPNK 91
           IL  +AV++   AL  WL +RP   +F V +A +   T+ P + L   +      RNPN+
Sbjct: 51  ILITIAVLLGIAALIIWLIFRPNAIKFHVTDAKLTEFTLDPTNNLRYNLDLNFTIRNPNR 110

Query: 92  LSSIYYDQLTGVVLYKDQQITPQVMLSPVINEKKTTVEIPLKISGAAVSAVSVTEELANE 151
              +YYD++     Y DQ+      +S      K T  +  K+ G  +  +   E    +
Sbjct: 111 RIGVYYDEIEVRGYYGDQRFGMSNNISKFYQGHKNTTVVGTKLVGQQLVLLDGGER--KD 170

Query: 152 IVRSTESGLFWLRVVLMGRVKWKLGGVRIGYYALSVKCDVLVTNTKDDSVGSLPSPRSTT 211
           +     S ++ +   L  ++++K G ++   +   +KCD+ V  T + + G +  P  T 
Sbjct: 171 LNEDVNSQIYRIDAKLRLKIRFKFGLIKSWRFKPKIKCDLKVPLTSNSTSGFVFQP--TK 230

Query: 212 CNVDF 215
           C+VDF
Sbjct: 231 CDVDF 231

[Close]

BLAST of CSPI06G22560 vs. ExPASy Swiss-Prot
Match: Q9SJ52 (NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 7.5e-06
Identity = 43/165 (26.06%), Postives = 76/165 (46.06%), Query Frame = 0


Query: 29  YVTILFVLAVIMASCAL--WLAYRPKNPEFAVVEAVIYNLTVSPPSQLLT-TMACTIVTR 88
           +V ++  L VI+   AL  WL  RP+  +F V +A +     + P  +L   +A T+  R
Sbjct: 41  FVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALTVPVR 100

Query: 89  NPNKLSSIYYDQLTGVVLYKDQQITPQVMLSPVINEKKTTVEIPLKISGAAVSAVSVTEE 148
           NPNK   +YYD++     Y+ ++ +  + L+P     K T  +     G  +   +  + 
Sbjct: 101 NPNKRIGLYYDRIEAHAYYEGKRFS-TITLTPFYQGHKNTTVLTPTFQGQNLVIFNAGQS 160

Query: 149 LANEIVRSTESGLFWLRVVLMGRVKWKLGGVRIGYYALSVKCDVL 191
                 R   SG++ + +    RV++KLG ++       V CD L
Sbjct: 161 RTLNAERI--SGVYNIEIKFRLRVRFKLGDLKFRRIKPKVDCDDL 202

[Close]

BLAST of CSPI06G22560 vs. ExPASy TrEMBL
Match: A0A0A0KEK5 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G421030 PE=4 SV=1)

HSP 1 Score: 418.7 bits (1075), Expect = 1.5e-113
Identity = 214/215 (99.53%), Postives = 215/215 (100.00%), Query Frame = 0


Query: 1   MEVSEECRDEEHNVNSKTNKLQYGFICKYVTILFVLAVIMASCALWLAYRPKNPEFAVVE 60
           MEVSEECRDEEHNVNSKTNKLQYGFICKYVTILFVLAVIMASCALWLAYRPKNPEF+VVE
Sbjct: 1   MEVSEECRDEEHNVNSKTNKLQYGFICKYVTILFVLAVIMASCALWLAYRPKNPEFSVVE 60

Query: 61  AVIYNLTVSPPSQLLTTMACTIVTRNPNKLSSIYYDQLTGVVLYKDQQITPQVMLSPVIN 120
           AVIYNLTVSPPSQLLTTMACTIVTRNPNKLSSIYYDQLTGVVLYKDQQITPQVMLSPVIN
Sbjct: 61  AVIYNLTVSPPSQLLTTMACTIVTRNPNKLSSIYYDQLTGVVLYKDQQITPQVMLSPVIN 120

Query: 121 EKKTTVEIPLKISGAAVSAVSVTEELANEIVRSTESGLFWLRVVLMGRVKWKLGGVRIGY 180
           EKKTTVEIPLKISGAAVSAVSVTEELANEIVRSTESGLFWLRVVLMGRVKWKLGGVRIGY
Sbjct: 121 EKKTTVEIPLKISGAAVSAVSVTEELANEIVRSTESGLFWLRVVLMGRVKWKLGGVRIGY 180

Query: 181 YALSVKCDVLVTNTKDDSVGSLPSPRSTTCNVDFA 216
           YALSVKCDVLVTNTKDDSVGSLPSPRSTTCNVDFA
Sbjct: 181 YALSVKCDVLVTNTKDDSVGSLPSPRSTTCNVDFA 215

[Close]

BLAST of CSPI06G22560 vs. ExPASy TrEMBL
Match: A0A5N6QME8 (LEA_2 domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_003731 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 4.0e-34
Identity = 86/188 (45.74%), Postives = 117/188 (62.23%), Query Frame = 0


Query: 26  ICKYVTILFVLAVIMASCALWLAYRPKNPEFAVVEAVIYNLTVSPPSQLLTTMACTIVTR 85
           +C  +TI F+L + + +  LWL YRP  P+F VV A IY +  S P  +  TM  T+VTR
Sbjct: 14  VCSCITI-FLLLIGVTALTLWLVYRPHKPQFKVVGAAIYEINTSAPPLISITMQFTLVTR 73

Query: 86  NPNKLSSIYYDQLTGVVLYKDQQITPQVMLSPVINEKKTTVEIPLKISGAAVSAVSVTEE 145
           NPNK  SIYYD+L+  V Y+DQ ITPQVML P+ +E+ +TV +   + G    AV V+ E
Sbjct: 74  NPNKRVSIYYDRLSAFVSYRDQAITPQVMLPPLFHERHSTVVVSPLVGG---GAVPVSVE 133

Query: 146 LANEIVRSTESGLFWLRVVLMGRVKWKLGGVRIGYYALSVKCDVLVTNTKDDSVGSLPSP 205
           +AN +V     G+  LR+ L+GR++WK G +R G+Y + VKCDVLV   K   VG +P  
Sbjct: 134 VANGLVEDEAYGVVGLRLALLGRLRWKAGAIRTGHYGVYVKCDVLV-GLKKGFVGQVPLL 193

Query: 206 RSTTCNVD 214
            S  C VD
Sbjct: 194 GSPGCKVD 196

[Close]

BLAST of CSPI06G22560 vs. ExPASy TrEMBL
Match: A0A6J1CWG5 (NDR1/HIN1-like protein 12 OS=Momordica charantia OX=3673 GN=LOC111015429 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 1.2e-33
Identity = 89/213 (41.78%), Postives = 131/213 (61.50%), Query Frame = 0


Query: 5   EECRDEEHN----VNSKTNKLQYGFICKYVTILFVLAVIMASCALWLAYRPKNPEFAVVE 64
           EE ++ +H      +   +K  +  +C  ++I F+L + + +  LWL YRP +P+F VV 
Sbjct: 17  EELKEAKHRKRIYPSQYYSKSTHRSVCACISI-FLLMIGVVALILWLVYRPTDPQFTVVS 76

Query: 65  AVIYNLTVSPPSQLLTTMACTIVTRNPNKLSSIYYDQLTGVVLYKDQQITPQVMLSPVIN 124
           A IY+L +S P  L TTM  TI+TRNPN+  SIYYD+LT  V Y++QQIT QVML P+ +
Sbjct: 77  AAIYDLNMSSPPLLSTTMQFTIITRNPNRRVSIYYDRLTAFVSYRNQQITSQVMLPPLFH 136

Query: 125 EKKTTVEIPLKISGAAVSAVSVTEELANEIVRSTESGLFWLRVVLMGRVKWKLGGVRIGY 184
           EK++T+ +   + G    AV  + E+ N +V     G+  LRV L+GR++WK G V+ G+
Sbjct: 137 EKRSTLAMSPVLGG---GAVPTSLEVVNGLVTDQTIGVIGLRVALLGRIRWKAGLVKTGH 196

Query: 185 YALSVKCDVLVTNTKDDSVGSLPSPRSTTCNVD 214
           Y++ V+CDVLV   K   VG +P   S  C VD
Sbjct: 197 YSVYVRCDVLV-GVKRGLVGQVPLLGSPACKVD 224

[Close]

BLAST of CSPI06G22560 vs. ExPASy TrEMBL
Match: A0A0A0L882 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G116630 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 2.0e-33
Identity = 89/188 (47.34%), Postives = 123/188 (65.43%), Query Frame = 0


Query: 26  ICKYVTILFVLAVIMASCALWLAYRPKNPEFAVVEAVIYNLTVSPPSQLLTTMACTIVTR 85
           +C  ++I F+L + + +  LWL YRP +P+F VV A IY+L +S    L TTM  TIVTR
Sbjct: 39  VCACISI-FLLVIGVVALTLWLVYRPIDPQFTVVGAAIYDLNMSSLPLLSTTMQFTIVTR 98

Query: 86  NPNKLSSIYYDQLTGVVLYKDQQITPQVMLSPVINEKKTTVEIPLKISGAAVSAVSVTEE 145
           NPN+  SIYYD+LT  V Y++QQIT QV+L P+ +EK++TV +   + G    AV+V+ E
Sbjct: 99  NPNRRVSIYYDRLTVFVSYRNQQITSQVILPPLAHEKRSTVAMSPVLGG---GAVAVSLE 158

Query: 146 LANEIVRSTESGLFWLRVVLMGRVKWKLGGVRIGYYALSVKCDVLVTNTKDDSVGSLPSP 205
           +AN +V     G+  LRVVL+GR++WK G ++ G Y++ VKCDVLV   K   VG LP  
Sbjct: 159 VANGLVTDQTIGVLGLRVVLLGRLRWKAGPLKTGRYSVYVKCDVLV-GVKRGLVGQLPML 218

Query: 206 RSTTCNVD 214
            S  C VD
Sbjct: 219 ASPPCKVD 221

[Close]

BLAST of CSPI06G22560 vs. ExPASy TrEMBL
Match: A0A5D3DAX9 (NDR1/HIN1-like protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00030 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 2.6e-33
Identity = 92/202 (45.54%), Postives = 128/202 (63.37%), Query Frame = 0


Query: 12  HNVNSKTNKLQYGFICKYVTILFVLAVIMASCALWLAYRPKNPEFAVVEAVIYNLTVSPP 71
           H   SK+ +     +C  ++I F+L + + +  LWL YRP +P+F VV A IY+L +S  
Sbjct: 28  HRYYSKSTRRS---VCACISI-FLLIIGVVALTLWLVYRPIDPQFTVVGAAIYDLNMSSL 87

Query: 72  SQLLTTMACTIVTRNPNKLSSIYYDQLTGVVLYKDQQITPQVMLSPVINEKKTTVEIPLK 131
             L TTM  TIVTRNPN+  SIYYD+LT  V Y++QQIT QV+L P+ +EK++TV +   
Sbjct: 88  PLLSTTMQFTIVTRNPNRRVSIYYDRLTIFVSYRNQQITSQVILPPLAHEKRSTVAMSPV 147

Query: 132 ISGAAVSAVSVTEELANEIVRSTESGLFWLRVVLMGRVKWKLGGVRIGYYALSVKCDVLV 191
           + G    AV+V+ E+AN +V     G+  LRVVL+GR++WK G ++ G YA+ VKCDVL+
Sbjct: 148 LGG---GAVAVSLEVANGLVTDQTIGVLGLRVVLLGRLRWKAGPLKTGRYAVYVKCDVLM 207

Query: 192 TNTKDDSVGSLPSPRSTTCNVD 214
              K   VG LP   S  C VD
Sbjct: 208 -GVKRGLVGQLPMLASPPCKVD 221

[Close]

BLAST of CSPI06G22560 vs. NCBI nr
Match: KGN47958.1 (hypothetical protein Csa_003254 [Cucumis sativus])

HSP 1 Score: 418.7 bits (1075), Expect = 3.1e-113
Identity = 214/215 (99.53%), Postives = 215/215 (100.00%), Query Frame = 0


Query: 1   MEVSEECRDEEHNVNSKTNKLQYGFICKYVTILFVLAVIMASCALWLAYRPKNPEFAVVE 60
           MEVSEECRDEEHNVNSKTNKLQYGFICKYVTILFVLAVIMASCALWLAYRPKNPEF+VVE
Sbjct: 1   MEVSEECRDEEHNVNSKTNKLQYGFICKYVTILFVLAVIMASCALWLAYRPKNPEFSVVE 60

Query: 61  AVIYNLTVSPPSQLLTTMACTIVTRNPNKLSSIYYDQLTGVVLYKDQQITPQVMLSPVIN 120
           AVIYNLTVSPPSQLLTTMACTIVTRNPNKLSSIYYDQLTGVVLYKDQQITPQVMLSPVIN
Sbjct: 61  AVIYNLTVSPPSQLLTTMACTIVTRNPNKLSSIYYDQLTGVVLYKDQQITPQVMLSPVIN 120

Query: 121 EKKTTVEIPLKISGAAVSAVSVTEELANEIVRSTESGLFWLRVVLMGRVKWKLGGVRIGY 180
           EKKTTVEIPLKISGAAVSAVSVTEELANEIVRSTESGLFWLRVVLMGRVKWKLGGVRIGY
Sbjct: 121 EKKTTVEIPLKISGAAVSAVSVTEELANEIVRSTESGLFWLRVVLMGRVKWKLGGVRIGY 180

Query: 181 YALSVKCDVLVTNTKDDSVGSLPSPRSTTCNVDFA 216
           YALSVKCDVLVTNTKDDSVGSLPSPRSTTCNVDFA
Sbjct: 181 YALSVKCDVLVTNTKDDSVGSLPSPRSTTCNVDFA 215

[Close]

BLAST of CSPI06G22560 vs. NCBI nr
Match: XP_004140243.1 (NDR1/HIN1-like protein 26 [Cucumis sativus])

HSP 1 Score: 343.2 bits (879), Expect = 1.6e-90
Identity = 175/176 (99.43%), Postives = 176/176 (100.00%), Query Frame = 0


Query: 40  MASCALWLAYRPKNPEFAVVEAVIYNLTVSPPSQLLTTMACTIVTRNPNKLSSIYYDQLT 99
           MASCALWLAYRPKNPEF+VVEAVIYNLTVSPPSQLLTTMACTIVTRNPNKLSSIYYDQLT
Sbjct: 1   MASCALWLAYRPKNPEFSVVEAVIYNLTVSPPSQLLTTMACTIVTRNPNKLSSIYYDQLT 60

Query: 100 GVVLYKDQQITPQVMLSPVINEKKTTVEIPLKISGAAVSAVSVTEELANEIVRSTESGLF 159
           GVVLYKDQQITPQVMLSPVINEKKTTVEIPLKISGAAVSAVSVTEELANEIVRSTESGLF
Sbjct: 61  GVVLYKDQQITPQVMLSPVINEKKTTVEIPLKISGAAVSAVSVTEELANEIVRSTESGLF 120

Query: 160 WLRVVLMGRVKWKLGGVRIGYYALSVKCDVLVTNTKDDSVGSLPSPRSTTCNVDFA 216
           WLRVVLMGRVKWKLGGVRIGYYALSVKCDVLVTNTKDDSVGSLPSPRSTTCNVDFA
Sbjct: 121 WLRVVLMGRVKWKLGGVRIGYYALSVKCDVLVTNTKDDSVGSLPSPRSTTCNVDFA 176

[Close]

BLAST of CSPI06G22560 vs. NCBI nr
Match: XP_038899063.1 (NDR1/HIN1-like protein 12 [Benincasa hispida])

HSP 1 Score: 155.6 bits (392), Expect = 4.8e-34
Identity = 90/188 (47.87%), Postives = 123/188 (65.43%), Query Frame = 0


Query: 26  ICKYVTILFVLAVIMASCALWLAYRPKNPEFAVVEAVIYNLTVSPPSQLLTTMACTIVTR 85
           +C  ++I F+L + + +  LWL YRP +P+F VV A IY+L +S    L TTM  TIVTR
Sbjct: 40  VCACISI-FLLIIGVVALTLWLVYRPIHPQFTVVGAAIYDLNMSSLPLLSTTMQFTIVTR 99

Query: 86  NPNKLSSIYYDQLTGVVLYKDQQITPQVMLSPVINEKKTTVEIPLKISGAAVSAVSVTEE 145
           NPN+  SIYYD+L   V Y++QQIT QVML P+++EK++TV +   + G    AV+V+ E
Sbjct: 100 NPNRRVSIYYDRLIAFVSYRNQQITSQVMLPPLVHEKRSTVAMSPVLGG---GAVAVSLE 159

Query: 146 LANEIVRSTESGLFWLRVVLMGRVKWKLGGVRIGYYALSVKCDVLVTNTKDDSVGSLPSP 205
           +AN +V     G+  LRVVL+GR++WK G ++ G YA+ VKCDVLV   K   VG LP  
Sbjct: 160 VANGLVTDQAIGVLGLRVVLLGRLRWKAGPLKTGRYAVYVKCDVLV-GVKRGLVGQLPML 219

Query: 206 RSTTCNVD 214
            S  C VD
Sbjct: 220 ASPACKVD 222

[Close]

BLAST of CSPI06G22560 vs. NCBI nr
Match: XP_042982786.1 (NDR1/HIN1-like protein 12 [Carya illinoinensis] >KAG6667183.1 hypothetical protein CIPAW_01G083300 [Carya illinoinensis] >KAG7994841.1 hypothetical protein I3843_01G078900 [Carya illinoinensis])

HSP 1 Score: 154.8 bits (390), Expect = 8.2e-34
Identity = 87/188 (46.28%), Postives = 118/188 (62.77%), Query Frame = 0


Query: 26  ICKYVTILFVLAVIMASCALWLAYRPKNPEFAVVEAVIYNLTVSPPSQLLTTMACTIVTR 85
           +C ++TIL +L  + A   LWL YRP  P+F VV A IY+   + P  + TTM  T+VTR
Sbjct: 38  LCTFITILLLLLGVTA-LTLWLVYRPHKPQFKVVGASIYDFNTTTPQVISTTMQFTVVTR 97

Query: 86  NPNKLSSIYYDQLTGVVLYKDQQITPQVMLSPVINEKKTTVEIPLKISGAAVSAVSVTEE 145
           NPNK  SIYYD+L+  V YKDQ ITPQVML P+ +EK +TV +   + G     V V+ E
Sbjct: 98  NPNKRLSIYYDRLSVFVSYKDQAITPQVMLPPLFHEKHSTVVVSPVVGG---GTVPVSVE 157

Query: 146 LANEIVRSTESGLFWLRVVLMGRVKWKLGGVRIGYYALSVKCDVLVTNTKDDSVGSLPSP 205
           +AN ++     G+  LR+VLMGR++WK G +R G+Y + VKCD+L+   K   VG +P  
Sbjct: 158 VANGLMMDEAYGVVGLRLVLMGRLRWKAGPIRTGHYGVYVKCDILM-GLKRGYVGQVPLL 217

Query: 206 RSTTCNVD 214
            S  C VD
Sbjct: 218 GSPECKVD 220

[Close]

BLAST of CSPI06G22560 vs. NCBI nr
Match: KAE7999283.1 (hypothetical protein FH972_003731 [Carpinus fangiana])

HSP 1 Score: 154.8 bits (390), Expect = 8.2e-34
Identity = 86/188 (45.74%), Postives = 117/188 (62.23%), Query Frame = 0


Query: 26  ICKYVTILFVLAVIMASCALWLAYRPKNPEFAVVEAVIYNLTVSPPSQLLTTMACTIVTR 85
           +C  +TI F+L + + +  LWL YRP  P+F VV A IY +  S P  +  TM  T+VTR
Sbjct: 14  VCSCITI-FLLLIGVTALTLWLVYRPHKPQFKVVGAAIYEINTSAPPLISITMQFTLVTR 73

Query: 86  NPNKLSSIYYDQLTGVVLYKDQQITPQVMLSPVINEKKTTVEIPLKISGAAVSAVSVTEE 145
           NPNK  SIYYD+L+  V Y+DQ ITPQVML P+ +E+ +TV +   + G    AV V+ E
Sbjct: 74  NPNKRVSIYYDRLSAFVSYRDQAITPQVMLPPLFHERHSTVVVSPLVGG---GAVPVSVE 133

Query: 146 LANEIVRSTESGLFWLRVVLMGRVKWKLGGVRIGYYALSVKCDVLVTNTKDDSVGSLPSP 205
           +AN +V     G+  LR+ L+GR++WK G +R G+Y + VKCDVLV   K   VG +P  
Sbjct: 134 VANGLVEDEAYGVVGLRLALLGRLRWKAGAIRTGHYGVYVKCDVLV-GLKKGFVGQVPLL 193

Query: 206 RSTTCNVD 214
            S  C VD
Sbjct: 194 GSPGCKVD 196

[Close]

BLAST of CSPI06G22560 vs. TAIR 10
Match: AT4G01410.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 117.1 bits (292), Expect = 1.8e-26
Identity = 69/183 (37.70%), Postives = 104/183 (56.83%), Query Frame = 0


Query: 31  TILFVLAVIMASCALWLAYRPKNPEFAVVEAVIYNLTVSPPSQLLTTMACTIVTRNPNKL 90
           TIL +L +I  +  LWL YRP  P   VV A IY+L  + P  + T++  +++ RNPN+ 
Sbjct: 50  TILVILGII--ALILWLVYRPHKPRLTVVGAAIYDLNFTAPPLISTSVQFSVLARNPNRR 109

Query: 91  SSIYYDQLTGVVLYKDQQITPQVMLSPVINEKKTTVEIPLKISGAAVSAVSVTEELANEI 150
            SI+YD+L+  V YKDQ ITP + L P+    K+TV I   + G   + + V+ E+AN +
Sbjct: 110 VSIHYDKLSMYVTYKDQIITPPLPLPPLRLGHKSTVVIAPVMGG---NGIPVSPEVANGL 169

Query: 151 VRSTESGLFWLRVVLMGRVKWKLGGVRIGYYALSVKCDVLVTNTKDDSVGSLPSPRSTTC 210
                 G+  +RVV+ GR++WK G ++ G Y    +CDV +      S G +P    +TC
Sbjct: 170 KNDEAYGVVLMRVVIFGRLRWKAGAIKTGRYGFYARCDVWL-RFNPSSNGQVPLLAPSTC 226

Query: 211 NVD 214
            VD
Sbjct: 230 KVD 226

[Close]

BLAST of CSPI06G22560 vs. TAIR 10
Match: AT4G09590.1 (NDR1/HIN1-like 22 )

HSP 1 Score: 88.2 bits (217), Expect = 8.8e-18
Identity = 57/172 (33.14%), Postives = 90/172 (52.33%), Query Frame = 0


Query: 34  FVLAVIMASCALWLAYRPKNPEFAVVEAVIYNLTVSPPSQLLTTMACTIVTRNPNKLSSI 93
           F++ V+M    +W+  +PKNPEF + +  +Y   +S P+ L +    TI +RN N    I
Sbjct: 29  FIIIVLMTIFLVWIILQPKNPEFILQDTTVYAFNLSQPNLLTSKFQITIASRNRNSNIGI 88

Query: 94  YYDQLTGVVLYKDQQITPQVMLSPVI-NEKKTTVEIPL----KISGAAVSAVSVTEELAN 153
           YYD L     Y++QQIT    L P     K+ +V  PL    ++  A  +AV++ +E   
Sbjct: 89  YYDHLHAYASYRNQQITLASDLPPTYQRHKEDSVWSPLLYGNQVPIAPFNAVALGDE--- 148

Query: 154 EIVRSTESGLFWLRVVLMGRVKWKLGGVRIGYYALSVKCDVLVTNTKDDSVG 201
                  SG+F L + + G+V+WK+G + IG Y L V+C   + N  D + G
Sbjct: 149 -----QNSGVFTLTICVDGQVRWKVGTLTIGNYHLHVRCQAFI-NQADKAAG 191

[Close]

BLAST of CSPI06G22560 vs. TAIR 10
Match: AT5G53730.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 85.1 bits (209), Expect = 7.5e-17
Identity = 58/201 (28.86%), Postives = 100/201 (49.75%), Query Frame = 0


Query: 13  NVNSKTNKLQYGFICKYVTILFVLAVIMASCALWLAYRPKNPEFAVVEAVIY--NLTVSP 72
           N+N++  KL + F   +  +L ++ ++      WL   P+ PEF++ EA IY  NLT S 
Sbjct: 19  NINNRHKKLFFTFSTFFSGLLLIIFLV------WLILHPERPEFSLTEADIYSLNLTTSS 78

Query: 73  PSQLLTTMACTIVTRNPNKLSSIYYDQLTGVVLYKDQQITPQVMLSPVINEKKTTVEIPL 132
              L +++  T+ ++NPNK   IYYD+L     Y+ QQIT +  L P     +   EI L
Sbjct: 79  THLLNSSVQLTLFSKNPNKKVGIYYDKLLVYAAYRGQQITSEASLPPFYQSHE---EINL 138

Query: 133 KISGAAVSAVSVTEELANEIVRSTESGLFWLRVVLMGRVKWKLGGVRIGYYALSVKCDVL 192
             +    + + V +    +I R   +G   + + + G+++WK+G    G Y  +V C  +
Sbjct: 139 LTAFLQGTELPVAQSFGYQISRERSTGKIIIGMKMDGKLRWKIGTWVSGAYRFNVNCLAI 198

Query: 193 VTNTKDDSVGSLPSPRSTTCN 212
           V    + +   L S + T C+
Sbjct: 199 VAFGMNMTTPPLASLQGTRCS 210

[Close]

BLAST of CSPI06G22560 vs. TAIR 10
Match: AT2G35970.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 82.4 bits (202), Expect = 4.8e-16
Identity = 56/172 (32.56%), Postives = 88/172 (51.16%), Query Frame = 0


Query: 34  FVLAVIMASCALWLAYRPKNPEFAVVEAVIYNLTVSPPSQLLTTMACTIVTRNPNKLSSI 93
           F++ V+M    + +  +PK PEF + +  +Y   +S P+ L +    TI +RN N    I
Sbjct: 29  FIIIVLMTIFLVSIILQPKKPEFILQDTTVYAFNLSQPNLLTSKFQITIASRNRNSNIGI 88

Query: 94  YYDQLTGVVLYKDQQITPQVMLSPVI-NEKKTTVEIPL----KISGAAVSAVSVTEELAN 153
           YYD L     Y++QQIT    L P     K+ +V  PL    ++  A  +AV++ +E   
Sbjct: 89  YYDHLHAYASYRNQQITLASDLPPTYQRHKENSVWSPLLYGNQVPIAPFNAVALGDE--- 148

Query: 154 EIVRSTESGLFWLRVVLMGRVKWKLGGVRIGYYALSVKCDVLVTNTKDDSVG 201
                  SG+F L + + GRV+WK+G + IG Y L V+C   + N  D + G
Sbjct: 149 -----QNSGVFTLTICVDGRVRWKVGTLTIGNYHLHVRCQAFI-NQADKAAG 191

[Close]

BLAST of CSPI06G22560 vs. TAIR 10
Match: AT5G06330.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 77.4 bits (189), Expect = 1.6e-14
Identity = 59/191 (30.89%), Postives = 93/191 (48.69%), Query Frame = 0


Query: 4   SEECRDEEHNVNSKTNKLQYGFICKYVTILFVLAVIMASCALWLAYRPKNPEFAVVEAVI 63
           S++C    H+ +S  N+     I  +   + +L +++    +W   +P  P F + +A +
Sbjct: 3   SKDC--GSHDSHSSCNRK----IVIWTISIILLLILVVILLVWAILQPSKPRFVLQDATV 62

Query: 64  YNLTVS--PPSQLLTTMACTIVTRNPNKLSSIYYDQLTGVVLYKDQQIT-PQVMLSPVIN 123
           +N  VS  PP+ L +    T+ +RNPN    IYYD+L     Y+ QQIT P  ML+    
Sbjct: 63  FNFNVSGNPPNLLTSNFQFTLSSRNPNDKIGIYYDRLDVYASYRSQQITLPSPMLTTYQG 122

Query: 124 EKKTTVEIPLKISGAAVSAVSVTEELANEIVRSTESGLFWLRVVLMGRVKWKLGGVRIGY 183
            K+  V  P  + G    +V V    A  + +   SG   L + L GRV+WK+G    G 
Sbjct: 123 HKEVNVWSPF-VGG---YSVPVAPYNAFYLDQDHSSGAIMLMLHLDGRVRWKVGSFITGK 182

Query: 184 YALSVKCDVLV 192
           Y L V+C  L+
Sbjct: 183 YHLHVRCHALI 183

The following BLAST results are available for this feature:

BLAST of CSPI06G22560 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FI03	1.1e-15	28.86	NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1	[more]
Q9SJ54	3.2e-12	30.23	NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana OX=3702 GN=NHL12 PE=2 SV=1	[more]
Q9SRN0	9.2e-12	31.93	NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=NHL1 PE=2 SV=1	[more]
Q9FNH6	3.0e-10	25.95	NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1	[more]
Q9SJ52	7.5e-06	26.06	NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1	[more]

BLAST of CSPI06G22560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KEK5	1.5e-113	99.53	LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G421030 PE=4 ...	[more]
A0A5N6QME8	4.0e-34	45.74	LEA_2 domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_003731 P...	[more]
A0A6J1CWG5	1.2e-33	41.78	NDR1/HIN1-like protein 12 OS=Momordica charantia OX=3673 GN=LOC111015429 PE=4 SV...	[more]
A0A0A0L882	2.0e-33	47.34	LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G116630 PE=4 ...	[more]
A0A5D3DAX9	2.6e-33	45.54	NDR1/HIN1-like protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]

BLAST of CSPI06G22560 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN47958.1	3.1e-113	99.53	hypothetical protein Csa_003254 [Cucumis sativus]	[more]
XP_004140243.1	1.6e-90	99.43	NDR1/HIN1-like protein 26 [Cucumis sativus]	[more]
XP_038899063.1	4.8e-34	47.87	NDR1/HIN1-like protein 12 [Benincasa hispida]	[more]
XP_042982786.1	8.2e-34	46.28	NDR1/HIN1-like protein 12 [Carya illinoinensis] >KAG6667183.1 hypothetical prote...	[more]
KAE7999283.1	8.2e-34	45.74	hypothetical protein FH972_003731 [Carpinus fangiana]	[more]

BLAST of CSPI06G22560 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G01410.1	1.8e-26	37.70	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT4G09590.1	8.8e-18	33.14	NDR1/HIN1-like 22	[more]
AT5G53730.1	7.5e-17	28.86	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT2G35970.1	4.8e-16	32.56	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT5G06330.1	1.6e-14	30.89	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA_2 subgroup	PFAM	PF03168	LEA_2	coord: 85..187 e-value: 1.7E-6 score: 28.5
IPR044839	Protein NDR1-like	PANTHER	PTHR31415	OS05G0367900 PROTEIN	coord: 24..213
None	No IPR available	PANTHER	PTHR31415:SF9	OS05G0367900 PROTEIN	coord: 24..213

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G22560.1	CSPI06G22560.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0098542	defense response to other organism
cellular_component	GO:0046658	anchored component of plasma membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009506	plasmodesma