CSPI06G21820 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI06G21820
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	protein PALE CRESS, chloroplastic
Location	Chr6: 19781229 .. 19790824 (+)
RNA-Seq Expression	CSPI06G21820
Synteny	CSPI06G21820

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAAAGTTATGCCTGCTTTTGTAAACGAAAACCAAAACTATACTACTTTGCTAATTTCCATTGATATGTTCTTTTGTTTATTGGGTTTGTTGAGCGTTCTTACCTTCACGTTCGCTTTGTTTGTTTGTTTGGGAACTAAAAAATGGAGGCACAGTTACTTTGCTTGAGGTTCTCATCACTTCCACCATTGCTCTCCACTACCCCAATCTTACCAAAGCTTTGGACATCTCCTTCCTCCCACCGCTATTCATCTGGTCTTGGTTAGCCCTCTTTCAATCACTCTTCTTCACCGACAAATTTTCATCCTAACTTTTCATTTTCGTGACCGTTTGATGCCCAGTTTTACGGAGGAGTTTGAGCAAAGAAGAGCCGCTTATTGATGGGCTCCCTAAAGAGTATTACGATGATGTATGTGTTTATCTAGTTTTATTTTTTTGCTTGATTCAGCTTCTGCTTCTTCCTCTATATCTTCTTGTTTACAATTGTGGGTGTTATCTGGTATTTTCTATTTTCTGGTACTGGGCAGGGCAAAAGCACGAAGACTTACAGAAATGAAAGTGATGAATTTTTCTTGTGACACGTACTTGTTGTCAATACCCAGTTGAAGCTGAACCATTTTCGAAAATAAATAAAAAGACAATCGCTATACTTGGCGATTTTAGGGGAGATTTCCTGTTCTACCAATTTTTTTTTTTTTTTTTTTTTGTTAAAATGCTTCTCCTCGAGTTTGTGACCATGAGAACGGTGAAGAGCAATGGAGCAGGGGTGAAAGAGAGGGAGAGACACTACAACGGATTTATAAAAAAATGAGTTGAAAGGTTATTTTACAAAGCCGACAGATGAAAATTATGTTTGATTTCATTAATTTATTTTTGAGGGAGGGTGGGTAGATTTCATCGAGGTAGTCAAAACAGTGTGATAGCCATTTGAGGTGATCGATACGTTTCTCTATATTAACTGACCATTAGAAAGGAAATATGTTGGTCAAAGAATTGTGGTTTGGATTTTGGTTAAAAAGAAGTGATTAATATGTGTACTTTTTCTAATCGTTTCACAATATTATCTGACAGAAATTTGTTAGTCAAACACTGATAGCAAAGTATAACATGTGCTGCCCTGGATGACTAAGAAGAAAAGATCTCTTTTTCGACTAAGAAATGGATAACTTGGACATCCTTACTTTGTTGCTGGAAAATGTTAGGCTGGGTCGAGTAGTGATGTTTTTCTATTGTGGAAGTTCTAAAACTCTGCCTTTTTTGAGTCATAATCAGCCTCTTTAGTCCTCCACGAAGGGAGAAGAATTTTGGCCCTGGACTTTTGCAACTTGATCTGAGAAGAATTATGTCCTAAAAAGATTAAACTTTTCCTTTGGACAGCAGCTTTAGTAGCACCAATATCATTGATAAAGTTCAAAGAGGTCATCCTTATTCAATTGACCCCCCTTATTTGTGTCGTGGAATAGTAACGAAGAATCTCTTCCACCTTTTCATTCACTGCAGTTTTATCTTATGTTTTTCTGTGGGAACTTAGAATAAGCTAAAGCTGTGGGCCATACAAAGGGCTTAATTAAAAATAATTAAACACAGTTTTGTATCGCCATATAAACTTTTGCAAAGCTTTTTTTAGTATACATACTCTGGCTAATAGCTAATTAGAAGGTTTTCTTGTAACCTCGTTTAGCTGGGTTGGCTTTCCTCCCCTTTTGTATTTTTCTTTAATGAAATATCATGTTTGTGTTGTTTTTTTTTCTTATTTTTTATTTTTATAAATTAAACTATAAAGAAAAAGGGTTAAAAATCAGATACTAACCTGTTCTACGTTAGGAATGGCAAGCTCGGCAAAGAGAGAAGACAAAGGAGTTACATCGAAGGCGTCAAGAGGAAGATGAAGAAGAGGACAGAAAGGTAGAAGAATATCGTGAAATTGGAATGCGTCTGAAAGAATTTCCAGAAGAAGATGTCAGAAAAGCTCGAAAACTGGTTTCAAGCTTTATTAGAGCCGCTGAAGAAGTTGAAGAGGTAATCGATGGTTAGGAGTAGATTTCATGCTGCTTTTAATCATTAACTTGATCTTTCAAAAAACAAGGCGTTATCTTTAATTCAACATGAAGTTTTCTTGTTCTTTCTTATGGGCAATCTTCTTTGGAAATGCCCTAAAAGGTAGTCATCCAAAAAACACAAACCATGATTTTCTCTGTTATATTATTATTATTATTTTTGTAAGAAACTAGAATATGCATTCTGCAACAAAACAAAGAAGACTGCCTAAGAGATAGGGGATGAGATAGTCCCCACCCAATTAAAACTACTTACAAATTACCTTCCAGTCAAAAAGAGTCATTGATGAAGGGGAATTACAAAAGATTTTTCTATAGCTATGGCACCACCAAGAGCATTCAGCTGTGCAAAATCTAAAAAAAAAATAAAAATAATAATAATAATAATAAATCAAAAATCAAAAATCAAAAATCAAAAGACATGGACTTATCTTCAAAGGTTCTTCCCTTTTGTTTCAATCAAAAACACCACGAAAGAACTCTCAAGGTGAACTTCAATAGTGTTCCAGCCTTGTTCTTAAAATTCCATCCCCTCAAGGAATGAAATTACCTAGGGTTGATTCCTTATTAATCAAATCTATTTGGAGCTCCTCTTTCATTGGTTAGACAGTGTTTGGTGCGATTGATTCTGTTAAATGGTAGAAAAGAGAACACGAGTTAAATGAAAATCCCTAGAACAGGGAGAGAAAAACTATGATAGAGTCTCTTTTATTATTTTCACACCCGATGAAAGTTACAAGAAAAAGACAATTTTATAGGCTCTAGCAAGCCTTAACAAAAAAATGGAAATAAACTTAGAGTAACGTAAAATACTAGAATACCCTCGAGGTTATAAACTATGAACAAAGCCCTTTATTCCCAACACTCTCCCTCAAGCTGGGACGTAGATGTTAATCAAGCTCAACTTGCTAATACATGAGTCAAAACTTGGGTTGAGTAACCCTTTGGTGAGAACATCAGGAACTTGTCAGATGAAATATACGGAATACAGATACTGCAGTTGTCTAGTTTCTCTTTTATAAAATATCTGTCGATCTCCACATGTTTCGTTCTATCATGTTGTACAGGATTATTGGATATGCTTATAGCTGCTTTATTATCAGAATAGAGTTTCATAGGTAAAACACAGTTTTGGTGAAGATCAGACAAAACTTTCTTCAACCAGATTTCTTCACAGATTCCCTAACTCATAGCTTTATATTCAGCTTCAACACTGCTTCTAGTAACAACAATTTGCTTCTTACTTCTCCAAGTAACTAGGTTACTCCATACAAAGGTATAGTACTCAGAGGTAGATTTTTTGTCAATAACTGAGCCTCAATGGATTTCGTGTCAGTTTTTCTGAATATTAGACCTTTATTTGGAGAGTTTTTCAAACATCTCAGAAACCGATTCACAACTTCCATATGTTCTTCCTAGCTGCATAAACTGACTAACAATTCTAACAACATAAGAAATATCTTGTCTAGTGTGAAATAAGTAAATCAACTTTCCCACTAGACATCGATACCTCTCTTTATCAACAGGAACTTTGTCAACAGAATCTCTTAATTTAGCATTGAATTCATTAGGAGTGTCAGCAGGTCTACAACCAGTCACACTTGTTTCTTTTAACAGGTCAAGGATGTATTTCATTGTGAGACAGAGATACCTTCCCACCCCATTCCAAGGAAATATTTTAGATTCCCTAGTTTTTTATCTTCTGACAAGACAATATCAACTATATAGACAATTAGAACAACAATTTTCCATGAAACCCTAAACCCTAACCTTTTTCTAAACAACATGTGATCAGAGTGTCACCATTTGAAACCTTGGAACTTAACAAATATAGTATACTTGAATAATCACTCTCGGGAACTGTTTCAAACTATACAAAGACTTCTTATGTTTACATAGTTTTAGCTTGGGGGGGGGGGGGGGGGTTTAGTTAGTTAGGTTTGGGAATCAACATTGATACCGACATACATACAGCTTAAAAACATATTTTTTTTATATTTATGATCTTTCTCAAATTAATAATACCAACCACATTGATGGAGATAGCTTTTTAAAACTTCTCTTGTTTCTCATCATGGTGGTTAACGTTATAACTTAATACACTTACTTTTTTCTTTAAAGTTGAAGCCAAGGTTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTAATAAGCAAACATTAGGTGTATGCAAAAGATAATGCCATAATTCACCATTGAGAAATGTATTTTTCACATCAACTTGATAGAGAGGTTAGTCTTTATTAATTGCAACACAGAAAGAAGGACTCGGACCTCCCTGCAGAGGAGAAAGTCTCAAAATAATCTATCCCATAAGTTTAAGTAAACCTTTTTGCTACAAATCTAGCCTTGTACGTGTCTAGAGTTTCATCTGATTTATCCTTTTTGCTACAAATCTAGCCTTGTACGTGTCTAGAGTTTCATCTGATTTATATTTTAGAGCACCCAACTGTTATATGCTCTTTAGGAAAAACACGAACATCCCACGTATTATTCTTTTCAAGAGCACATGTTTCTTTCATGACGACAGTCTTCCACCTAGGAATTTCCATAGCCATATGTATGCTTTTTGGTATTGTTATTGTATCAAGGCTGGCTGTGAATTCCCTGAACTCAGGAGACAAATTATTGTATGACAAAACTGTTGGGGTATTTGGTGCAAGACCTGGTGCCCTTTCTCAATGCAATGTTAAGAGAGATATCAAAATCCCCTGATTTGTTTGGTTCTTCATTTGTAATGGATTTTTTATTACCTTTTCTAGCCTCTCTTGTGTTTATGTCGAAGTTTCATCACTGCTTGCAACCCCTTATTCTTTGGAACTAACATATCAGTCCCGTCATTCTGAGCCATGATCGATTCAGGAAGTTCTGTGGTGTCATGGGCACTCAAGATTGGTTCAGGAAGGTCAGTAAGGACTGAAGATGTGGACCAGTTAGTCTATTCACTTGTACTTACCCCAAGAAGGTGGCTAACTGGGAAGAAAGGTTGATCCTCAAGAAATGTTACATCCATGGAGATGAAGTATTTTCGGAAAGAAGGATTGAAGCATTTATAACCTCACTGGTGAAGGGGATACCCAACAAAAAAACATTTATGAGCACGAGGAGTAAACTTAGTTTGATTAGGGCCATGACTATGGACAAAGACAGTACACCAAAAATCTGGAGGACATCAAGAATAATCCACATGGCAGGGTATGAGTCTATGACTCCTTGAATCATTCAAGAGGGGTTTGGAGTTGGAGGACATGAGCTGAAGTGAGAACTGCAACACTGTAAGCTTATGCGGCTTCTTTAGGGGGATAAGAATACCTAATTTTTCCATGCAATAGTTGCTGGCCATCACCACAAAATTCGATAATTGAAGTTCTCTCCAAGAACTGTGCTAGCCTATTTACAGCTTAGGAAATCGAGATTGAACTTTTAGTATTCTATTCGACATTGTTCACTAAGCATGATAAGCGACTTTTACCCAACCAACCTGAAGTGGAGTCCTTGCGATTTTAGGGTTGAATGAGATGCATATAAATGTCTTATACCAAAGAGAGTTGACTATAAATCTGTCTCGGACTATCAGCTGATTAGACTTATTTCTTGTGACTAACTTGTTACTTGGGTTCTTTCGAAATGCTGGATATTGAGGTCATTTTCTTGGGTTTGGTTAGAGACTAGAGTGTTCTACTCATGGGTAGCCATGCATGGTGAATTTTCTTTGAACTTTTCCAATTTTGTATCCTTTTTCACATAAAGCTCTGACAATCAGATTATTGCAAAAGTGGCTTAGCAACTTACTGACACTATAGTTCATCAATTTGAATGCAGAAAATTGAGGAAGCTGCCGAGAAAGGGGAACTAACGGAGCTTGTTCTATTAGTCATATGGAATCGGCTTGATTTAGCACGTTGTGATGTATGTTTTTCTTCAAATTCCTTTAATTTTAAATTACTTGTTTGTTTTGGAGGGAGGCGAGTTCAATGTGCTTACTTATAACTGACTCTTTCTTCAGGATGAAAAGGATGCAGTTAGAAGTCTTGATCTGCTATATCGAAGGGTTGAGGTATGAACATCTTTTAAACTCTTTTGAACATGCCACGTTTGTTACGATCTTAAAGAACACTCATTGAAATCCTCCTTCGATGCTCAGTACATGAAGTTATACGATGCAAATCAAACAAGAGAAGTCGAAACTGAAACATTCTCAGTTTCTGACCACTAATAAACCAAGGAAGTGATCCTCCAAAATGTCCAACCAAACTGAAGACATCTTCCAAAATGTCGAACCAAACAGAGGGAGGAGGCTAATCTTGAAAGCCTTGAAGAGGTCTTCCAAAAAAACAAAAACTCTGCTACATCTATAACCGCAAGAGACCAAAAGAATAGATGATAAGCTTCTAAAATCTCCAACCAAACTGGAAACTGATGATCTCAATCGAGCCATCAATCATACACTGAAAGTGAAAAGGTGAAGGTCTTCAAAATACCCATGCAAAGCAATCTCAATGAAGGAGACAAGCATAGAGATGAAAGCTTCCTATGCAAAGTGTAAGAGCAAAACTTGTAGGTTTCAAGAGATGATTCAACCGTTAAAGAACAAAACGACCTAAAATCAGACTTCAAAACCTCAATTAAATCTTGATTTGTGGTGCCACTGCCACTGCTACTTCTTAATCTTAATCTTTATACTAGCCTTGCTATTTCAATGCTACATCTAATTTCTTTAAAACATGTCATACTCCCTGCACACCAAATAGGTAGATACATTCCTCCACATCGATCATCACCTTTGGCCCAATAGTCAAATACCAACGAATTTGAAAGTACTTGTAATTCTCTTGTTTATTCGACTTTTATACCTCGAGAGGGCTTTATTCAGGCTAACAAACTCCATTGATGCCATTAAATGTGGAGCCAATTGTCTCCCAAGCTCGCCATCTTCCCCATGGAAAGATTGATCTTTGGTCTTTACCCTTCTGTGTTTAGGCATAGAGTCGTGGAATAGTAATCAAGACCTCTTGCATCCATCACATTCTGTGCCCGCGCCAATAGGTCTTGCTGTGTTCAGTTGCTGCACAGTCTCTCTGTTTAAGTTTTGATATAATTAAGTTTACCTAATCTATAAGCTTAAAACTTTCGAGTCTAGTGATGATAGTGATGATAGTGATGATTGACAAGTCCATAAATGAGAGAGTGTTAAAATATTAATTATTAATATTAATTAAATATACTGCAACCATAAGCTTAATCTTTTAAGTTCAGTGGTGATTTAACCCAAAATTTCAAGTCCAAAAGCACGGAAGAGTAAAAATGGTTATATTAATTTCTTTCATAATTCATGAGCTTAAGCTTTTAAGGTCACTGGCAGTTCAACCCTCTGTTTCTGCAAATCAAACTATTTCCCTTCATTGTTCCAAGAAGAATAAGAGTATTTTAGGAGGAACCCCAAGTATGTAAAGGTAGAAGTGCAGGAGTAGGCATAAAATGTCCTCATTGCCATGGGCCCATATGTGTTTTCGAAGTATGTAGGGGTAGTAGAGCTCCCTTTGCTAATTTCTAGCCTACCCAGTACCTCCAGACAATGGTGTTGAAGCACCAGAAGCCCTCATTGTAAGTAACTCACTCCCACTTTTGTTCCACTTCCAGGATCAAGAGCTGCTAGTTTAACTGATAGTATATGTTAGACTCGGCATTTTCCAGTTTAGATATAATCTTAAATTTGTTTTCACCTACTAACTTAAGCTTTTGGGTTGAATCAATGATTTAAGATGATATCAAAGTAAGTTGTCTTTTGGGTTGAATCAATGATTTATATCAAAATAAGTTGTCTGGTGAAGTTCTATTTTCAAGATCATGTATCGTTACTTCCTCTCCATTTAATATTCATTTCTACTTGTTGGATCTTTCTTCATATTTCGAGCCCACAAGCGAGGAGAGTGTTAGATATAGTATTTAATTTGCCTTCGCTTATTAGCTTAAGATTTTGGATTAAGTTGTTGATTTAAGATTCTAGAAACCTTATTAACAAAAATAATAATTTTCTTTTTTTTTAAATTGCATAAAAATATACATATACACACACAATGAAATTCAAGTTCCCTTTGTATACCAACAATAATCTAATGAATAATCTCCTCTAATTTCGTTAGTTTCTTCATTTTGGGTTGCTTTACAACAAGTGAACTCTTCCAAATTCCGTTCAATTTTTTTTTTTTTTTTTGTTTGTTTTACTCATTACTTTCCTTTCTGCTTAACTTTGAAAAACGCAATAATCTGGATTCTCCTAATAATTCAAGTTCTAAGTTTCCCAATATTTTAGACTGAAATTCTCAAACGAGAGGCAACTCCTGCCATGAGACTCCTCAATGAACTTCTGAATATGTATGACGGCTTTGACAATGAAGGATGGTTAAAGGCCTGCAGAAAATGCATGGTCGATACCTTTCCGCGAGAGGATCCATTTAGCATTCTTGTTCCAGCTGGATTCGACATTGATAAGGTGCAATTTTGTAATGCAGTTTTTAATGTTAAAATTGAAGGGATGTCTAAACTAAGTCTACCATGTGGCTAATTCAGCTTTTGTCCTATGTCTTTTTCATGAGTAGCATCAAGGACCGTTACGGCCATCTCTTGCAGTTGAATCTGATAATACGCTTTTGAGAGTAGACTTTGTTAGAGAGGTTGATGAATTACTACAGGAAGTTGGAGCAGTTCAGAGTGACGTGCAAAATGGAAATGCAGATAGTTTTGATGCGGAATCTGTGGCAAGTAGGTTGAAACAACAGGAGAAACAACGTACAATAAGGTTGGTAGAAGCGCTTCTAGATTTGGCTATGAATCTGAAGTGGTAGGATAGCAATGAGAAATGATATGGGCTGGGCGTACGATATCATTGGTGGTGGGAAAAGAGAAGACATTGGATTTTTTTTCTTTCTTTTGTACAATTATAGGATAGGACATGCCAATCACAGTTAAGTTAGGTTAGTTTTGGTTAAGAATTTTAGATTATTAGTATTCTAGTATCCACTACCAATTTAGGTTTTTAAGAATGTCTTCAACCACGTTTCAAGAAAAATAAATAGTTAAAAAAGAATGTCTTCAACCACTGTCCAAAAACGAAGGATAAAAGAAATCATATGTAGGGGCTCTATATAACAAAAAAAAAAAAAATGTAATAGACAAGATTCGAACACATAAACTTTGAAAGGACACAATCACCG

mRNA sequence

TAAAAGTTATGCCTGCTTTTGTAAACGAAAACCAAAACTATACTACTTTGCTAATTTCCATTGATATGTTCTTTTGTTTATTGGGTTTGTTGAGCGTTCTTACCTTCACGTTCGCTTTGTTTGTTTGTTTGGGAACTAAAAAATGGAGGCACAGTTACTTTGCTTGAGGTTCTCATCACTTCCACCATTGCTCTCCACTACCCCAATCTTACCAAAGCTTTGGACATCTCCTTCCTCCCACCGCTATTCATCTGGTCTTGTTTTACGGAGGAGTTTGAGCAAAGAAGAGCCGCTTATTGATGGGCTCCCTAAAGAGTATTACGATGATGAATGGCAAGCTCGGCAAAGAGAGAAGACAAAGGAGTTACATCGAAGGCGTCAAGAGGAAGATGAAGAAGAGGACAGAAAGGTAGAAGAATATCGTGAAATTGGAATGCGTCTGAAAGAATTTCCAGAAGAAGATGTCAGAAAAGCTCGAAAACTGGTTTCAAGCTTTATTAGAGCCGCTGAAGAAGTTGAAGAGAAAATTGAGGAAGCTGCCGAGAAAGGGGAACTAACGGAGCTTGTTCTATTAGTCATATGGAATCGGCTTGATTTAGCACGTTGTGATGATGAAAAGGATGCAGTTAGAAGTCTTGATCTGCTATATCGAAGGGTTGAGACTGAAATTCTCAAACGAGAGGCAACTCCTGCCATGAGACTCCTCAATGAACTTCTGAATATGTATGACGGCTTTGACAATGAAGGATGGTTAAAGGCCTGCAGAAAATGCATGGTCGATACCTTTCCGCGAGAGGATCCATTTAGCATTCTTGTTCCAGCTGGATTCGACATTGATAAGCATCAAGGACCGTTACGGCCATCTCTTGCAGTTGAATCTGATAATACGCTTTTGAGAGTAGACTTTGTTAGAGAGGTTGATGAATTACTACAGGAAGTTGGAGCAGTTCAGAGTGACGTGCAAAATGGAAATGCAGATAGTTTTGATGCGGAATCTGTGGCAAGTAGGTTGAAACAACAGGAGAAACAACGTACAATAAGGTTGGTAGAAGCGCTTCTAGATTTGGCTATGAATCTGAAGTGGTAGGATAGCAATGAGAAATGATATGGGCTGGGCGTACGATATCATTGGTGGTGGGAAAAGAGAAGACATTGGATTTTTTTTCTTTCTTTTGTACAATTATAGGATAGGACATGCCAATCACAGTTAAGTTAGGTTAGTTTTGGTTAAGAATTTTAGATTATTAGTATTCTAGTATCCACTACCAATTTAGGTTTTTAAGAATGTCTTCAACCACGTTTCAAGAAAAATAAATAGTTAAAAAAGAATGTCTTCAACCACTGTCCAAAAACGAAGGATAAAAGAAATCATATGTAGGGGCTCTATATAACAAAAAAAAAAAAAATGTAATAGACAAGATTCGAACACATAAACTTTGAAAGGACACAATCACCG

Coding sequence (CDS)

ATGGAGGCACAGTTACTTTGCTTGAGGTTCTCATCACTTCCACCATTGCTCTCCACTACCCCAATCTTACCAAAGCTTTGGACATCTCCTTCCTCCCACCGCTATTCATCTGGTCTTGTTTTACGGAGGAGTTTGAGCAAAGAAGAGCCGCTTATTGATGGGCTCCCTAAAGAGTATTACGATGATGAATGGCAAGCTCGGCAAAGAGAGAAGACAAAGGAGTTACATCGAAGGCGTCAAGAGGAAGATGAAGAAGAGGACAGAAAGGTAGAAGAATATCGTGAAATTGGAATGCGTCTGAAAGAATTTCCAGAAGAAGATGTCAGAAAAGCTCGAAAACTGGTTTCAAGCTTTATTAGAGCCGCTGAAGAAGTTGAAGAGAAAATTGAGGAAGCTGCCGAGAAAGGGGAACTAACGGAGCTTGTTCTATTAGTCATATGGAATCGGCTTGATTTAGCACGTTGTGATGATGAAAAGGATGCAGTTAGAAGTCTTGATCTGCTATATCGAAGGGTTGAGACTGAAATTCTCAAACGAGAGGCAACTCCTGCCATGAGACTCCTCAATGAACTTCTGAATATGTATGACGGCTTTGACAATGAAGGATGGTTAAAGGCCTGCAGAAAATGCATGGTCGATACCTTTCCGCGAGAGGATCCATTTAGCATTCTTGTTCCAGCTGGATTCGACATTGATAAGCATCAAGGACCGTTACGGCCATCTCTTGCAGTTGAATCTGATAATACGCTTTTGAGAGTAGACTTTGTTAGAGAGGTTGATGAATTACTACAGGAAGTTGGAGCAGTTCAGAGTGACGTGCAAAATGGAAATGCAGATAGTTTTGATGCGGAATCTGTGGCAAGTAGGTTGAAACAACAGGAGAAACAACGTACAATAAGGTTGGTAGAAGCGCTTCTAGATTTGGCTATGAATCTGAAGTGGTAG

Protein sequence

MEAQLLCLRFSSLPPLLSTTPILPKLWTSPSSHRYSSGLVLRRSLSKEEPLIDGLPKEYYDDEWQARQREKTKELHRRRQEEDEEEDRKVEEYREIGMRLKEFPEEDVRKARKLVSSFIRAAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARCDDEKDAVRSLDLLYRRVETEILKREATPAMRLLNELLNMYDGFDNEGWLKACRKCMVDTFPREDPFSILVPAGFDIDKHQGPLRPSLAVESDNTLLRVDFVREVDELLQEVGAVQSDVQNGNADSFDAESVASRLKQQEKQRTIRLVEALLDLAMNLKW*

Homology

[Close]

BLAST of CSPI06G21820 vs. ExPASy Swiss-Prot
Match: Q39089 (Protein PALE CRESS, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAC PE=2 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 4.5e-108
Identity = 206/305 (67.54%), Postives = 247/305 (80.98%), Query Frame = 0


Query: 10  FSSLPPLLSTTPILPKLWTSPSSHRYSSGLVLRRSLSKEEPLIDGLPKEYYDDEWQARQR 69
           FSS   + +T  +  +L  S +  R       R S + +E L++G+P EYYDDEWQARQR
Sbjct: 15  FSSPRVISATKKLTTELSISTAKFR------RRCSGNNDEVLLEGMPPEYYDDEWQARQR 74

Query: 70  EKTKELHRRRQEEDEEEDRKVEEYREIGMRLKEFPEEDVRKARKLVSSFIRAAEEVEEKI 129
           EKTKEL R ++EE+EEE+RK+EEYREIG RLKEFPE+D+RKARKLVSSFIRAAEEVEE+I
Sbjct: 75  EKTKELRRMQREEEEEEERKIEEYREIGTRLKEFPEQDLRKARKLVSSFIRAAEEVEERI 134

Query: 130 EEAAEKGELTELVLLVIWNRLDLARCDDEKDAVRSLDLLYRRVETEILKREATPAMRLLN 189
           EEAAEKGEL ELVL++IWNRLDLAR DDEKDA+RSLDLLYRRVETEILKR+A+PAM+LLN
Sbjct: 135 EEAAEKGELDELVLMIIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKRQASPAMKLLN 194

Query: 190 ELLNMYDGFDNEGWLKACRKCMVDTFPREDPFSILVPAGFDIDKHQGPLRPSLAVESDNT 249
           +LLNM+DGF+++ WLK CRK M +TFPREDPFSIL+P GFDID HQG LRP +  E+DNT
Sbjct: 195 DLLNMHDGFEDDAWLKDCRKRMAETFPREDPFSILMPPGFDIDMHQGQLRPPIETETDNT 254

Query: 250 LLRVDFVREVDELLQEVGAVQSDVQNGNADSFDAESVASRLKQQEKQRTIRLVEALLDLA 309
           LLRVDFVREVD LLQEV   +        +  D E++A + KQQEKQRTIR +EA+LDLA
Sbjct: 255 LLRVDFVREVDALLQEVRIEEDATTGSKGEGLDPEAIALKFKQQEKQRTIRQIEAILDLA 313

Query: 310 MNLKW 315
           +NLKW
Sbjct: 315 LNLKW 313

[Close]

BLAST of CSPI06G21820 vs. ExPASy TrEMBL
Match: A0A0A0KJC6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G408790 PE=4 SV=1)

HSP 1 Score: 600.9 bits (1548), Expect = 3.1e-168
Identity = 313/314 (99.68%), Postives = 313/314 (99.68%), Query Frame = 0


Query: 1   MEAQLLCLRFSSLPPLLSTTPILPKLWTSPSSHRYSSGLVLRRSLSKEEPLIDGLPKEYY 60
           MEAQLLCLRFSSLPPLLSTTPILPKLWTSPSSHR SSGLVLRRSLSKEEPLIDGLPKEYY
Sbjct: 1   MEAQLLCLRFSSLPPLLSTTPILPKLWTSPSSHRCSSGLVLRRSLSKEEPLIDGLPKEYY 60

Query: 61  DDEWQARQREKTKELHRRRQEEDEEEDRKVEEYREIGMRLKEFPEEDVRKARKLVSSFIR 120
           DDEWQARQREKTKELHRRRQEEDEEEDRKVEEYREIGMRLKEFPEEDVRKARKLVSSFIR
Sbjct: 61  DDEWQARQREKTKELHRRRQEEDEEEDRKVEEYREIGMRLKEFPEEDVRKARKLVSSFIR 120

Query: 121 AAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARCDDEKDAVRSLDLLYRRVETEILKRE 180
           AAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARCDDEKDAVRSLDLLYRRVETEILKRE
Sbjct: 121 AAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARCDDEKDAVRSLDLLYRRVETEILKRE 180

Query: 181 ATPAMRLLNELLNMYDGFDNEGWLKACRKCMVDTFPREDPFSILVPAGFDIDKHQGPLRP 240
           ATPAMRLLNELLNMYDGFDNEGWLKACRKCMVDTFPREDPFSILVPAGFDIDKHQGPLRP
Sbjct: 181 ATPAMRLLNELLNMYDGFDNEGWLKACRKCMVDTFPREDPFSILVPAGFDIDKHQGPLRP 240

Query: 241 SLAVESDNTLLRVDFVREVDELLQEVGAVQSDVQNGNADSFDAESVASRLKQQEKQRTIR 300
           SLAVESDNTLLRVDFVREVDELLQEVGAVQSDVQNGNADSFDAESVASRLKQQEKQRTIR
Sbjct: 241 SLAVESDNTLLRVDFVREVDELLQEVGAVQSDVQNGNADSFDAESVASRLKQQEKQRTIR 300

Query: 301 LVEALLDLAMNLKW 315
           LVEALLDLAMNLKW
Sbjct: 301 LVEALLDLAMNLKW 314

[Close]

BLAST of CSPI06G21820 vs. ExPASy TrEMBL
Match: A0A5D3E2R9 (Protein PALE CRESS OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G00420 PE=4 SV=1)

HSP 1 Score: 577.8 bits (1488), Expect = 2.8e-161
Identity = 302/314 (96.18%), Postives = 305/314 (97.13%), Query Frame = 0


Query: 1   MEAQLLCLRFSSLPPLLSTTPILPKLWTSPSSHRYSSGLVLRRSLSKEEPLIDGLPKEYY 60
           MEAQ+LCLRFSSLP LLSTTPIL KLWTS SS  YSSGLVLRRS SKEEPLIDGLPKEYY
Sbjct: 1   MEAQVLCLRFSSLPQLLSTTPILSKLWTSRSSKHYSSGLVLRRSFSKEEPLIDGLPKEYY 60

Query: 61  DDEWQARQREKTKELHRRRQEEDEEEDRKVEEYREIGMRLKEFPEEDVRKARKLVSSFIR 120
           DDEWQARQREKTKELHRRRQEEDEEEDRKV+EY EIGMRLKEFPEEDVRKARKLVSSFIR
Sbjct: 61  DDEWQARQREKTKELHRRRQEEDEEEDRKVQEYHEIGMRLKEFPEEDVRKARKLVSSFIR 120

Query: 121 AAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARCDDEKDAVRSLDLLYRRVETEILKRE 180
           AAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARCDDEKDAVRSLDLLYRRVETEILKRE
Sbjct: 121 AAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARCDDEKDAVRSLDLLYRRVETEILKRE 180

Query: 181 ATPAMRLLNELLNMYDGFDNEGWLKACRKCMVDTFPREDPFSILVPAGFDIDKHQGPLRP 240
           ATPAMRLLNELLNMYDGFDNEGWLKACRKCMVDTFPREDPFSILVPAGFDIDKHQGPLRP
Sbjct: 181 ATPAMRLLNELLNMYDGFDNEGWLKACRKCMVDTFPREDPFSILVPAGFDIDKHQGPLRP 240

Query: 241 SLAVESDNTLLRVDFVREVDELLQEVGAVQSDVQNGNADSFDAESVASRLKQQEKQRTIR 300
           SL VE+DNTLLRVDFVREVDELLQEVGAVQSDVQN NADSFDAESVASRLKQQEKQRTIR
Sbjct: 241 SLTVEADNTLLRVDFVREVDELLQEVGAVQSDVQNENADSFDAESVASRLKQQEKQRTIR 300

Query: 301 LVEALLDLAMNLKW 315
           LVEALLDLAMNLKW
Sbjct: 301 LVEALLDLAMNLKW 314

[Close]

BLAST of CSPI06G21820 vs. ExPASy TrEMBL
Match: A0A1S3BMU2 (protein PALE CRESS, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103491280 PE=4 SV=1)

HSP 1 Score: 577.8 bits (1488), Expect = 2.8e-161
Identity = 302/314 (96.18%), Postives = 305/314 (97.13%), Query Frame = 0


Query: 1   MEAQLLCLRFSSLPPLLSTTPILPKLWTSPSSHRYSSGLVLRRSLSKEEPLIDGLPKEYY 60
           MEAQ+LCLRFSSLP LLSTTPIL KLWTS SS  YSSGLVLRRS SKEEPLIDGLPKEYY
Sbjct: 1   MEAQVLCLRFSSLPQLLSTTPILSKLWTSRSSKHYSSGLVLRRSFSKEEPLIDGLPKEYY 60

Query: 61  DDEWQARQREKTKELHRRRQEEDEEEDRKVEEYREIGMRLKEFPEEDVRKARKLVSSFIR 120
           DDEWQARQREKTKELHRRRQEEDEEEDRKV+EY EIGMRLKEFPEEDVRKARKLVSSFIR
Sbjct: 61  DDEWQARQREKTKELHRRRQEEDEEEDRKVQEYHEIGMRLKEFPEEDVRKARKLVSSFIR 120

Query: 121 AAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARCDDEKDAVRSLDLLYRRVETEILKRE 180
           AAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARCDDEKDAVRSLDLLYRRVETEILKRE
Sbjct: 121 AAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARCDDEKDAVRSLDLLYRRVETEILKRE 180

Query: 181 ATPAMRLLNELLNMYDGFDNEGWLKACRKCMVDTFPREDPFSILVPAGFDIDKHQGPLRP 240
           ATPAMRLLNELLNMYDGFDNEGWLKACRKCMVDTFPREDPFSILVPAGFDIDKHQGPLRP
Sbjct: 181 ATPAMRLLNELLNMYDGFDNEGWLKACRKCMVDTFPREDPFSILVPAGFDIDKHQGPLRP 240

Query: 241 SLAVESDNTLLRVDFVREVDELLQEVGAVQSDVQNGNADSFDAESVASRLKQQEKQRTIR 300
           SL VE+DNTLLRVDFVREVDELLQEVGAVQSDVQN NADSFDAESVASRLKQQEKQRTIR
Sbjct: 241 SLTVEADNTLLRVDFVREVDELLQEVGAVQSDVQNENADSFDAESVASRLKQQEKQRTIR 300

Query: 301 LVEALLDLAMNLKW 315
           LVEALLDLAMNLKW
Sbjct: 301 LVEALLDLAMNLKW 314

[Close]

BLAST of CSPI06G21820 vs. ExPASy TrEMBL
Match: A0A6J1EYI4 (protein PALE CRESS, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111437380 PE=4 SV=1)

HSP 1 Score: 505.8 bits (1301), Expect = 1.3e-139
Identity = 270/314 (85.99%), Postives = 285/314 (90.76%), Query Frame = 0


Query: 1   MEAQLLCLRFSSLPPLLSTTPILPKLWTSPSSHRYSSGLVLRRSLSKEEPLIDGLPKEYY 60
           M AQ+  LR S +PPL S +P LPKL TS     YSS  VLRRSLSKEEPLIDGLPKEYY
Sbjct: 1   MLAQVRWLRCSPVPPLPSASPTLPKLSTSYFLKLYSSRPVLRRSLSKEEPLIDGLPKEYY 60

Query: 61  DDEWQARQREKTKELHRRRQEEDEEEDRKVEEYREIGMRLKEFPEEDVRKARKLVSSFIR 120
           DDEWQARQREKTKELHRRRQEEDEEE+RKVEEYREIGMRLK FPEEDV KARKLVSSFIR
Sbjct: 61  DDEWQARQREKTKELHRRRQEEDEEEERKVEEYREIGMRLKGFPEEDVIKARKLVSSFIR 120

Query: 121 AAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARCDDEKDAVRSLDLLYRRVETEILKRE 180
           A EEVEEKIEEAAEKGELTELVLLVIWNRLDLAR DDEKDA+RSLDLLYRRVETEILKRE
Sbjct: 121 AVEEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKRE 180

Query: 181 ATPAMRLLNELLNMYDGFDNEGWLKACRKCMVDTFPREDPFSILVPAGFDIDKHQGPLRP 240
           A+PAMRLLN+LLNMYD F++EGWLK CRKCM+DTFPREDPFSILVPAGFDIDKHQG LRP
Sbjct: 181 ASPAMRLLNDLLNMYDNFNDEGWLKDCRKCMIDTFPREDPFSILVPAGFDIDKHQGQLRP 240

Query: 241 SLAVESDNTLLRVDFVREVDELLQEVGAVQSDVQNGNADSFDAESVASRLKQQEKQRTIR 300
           SL VE+DNTLLRVDFVREVDELLQEV A QS+VQN NAD FDAESVASRLKQQEKQRT+R
Sbjct: 241 SLEVEADNTLLRVDFVREVDELLQEVRADQSEVQNANADGFDAESVASRLKQQEKQRTVR 300

Query: 301 LVEALLDLAMNLKW 315
           LVE LL+LAMNL+W
Sbjct: 301 LVETLLELAMNLEW 314

[Close]

BLAST of CSPI06G21820 vs. ExPASy TrEMBL
Match: A0A6J1K329 (protein PALE CRESS, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111491264 PE=4 SV=1)

HSP 1 Score: 503.1 bits (1294), Expect = 8.7e-139
Identity = 269/314 (85.67%), Postives = 285/314 (90.76%), Query Frame = 0


Query: 1   MEAQLLCLRFSSLPPLLSTTPILPKLWTSPSSHRYSSGLVLRRSLSKEEPLIDGLPKEYY 60
           M AQ+L LR S +PPL S +P LPKL TS     YSS  VLRRSLSKEEPLIDGLPKEYY
Sbjct: 1   MLAQVLWLRCSPVPPLPSASPTLPKLSTSYFLKLYSSRPVLRRSLSKEEPLIDGLPKEYY 60

Query: 61  DDEWQARQREKTKELHRRRQEEDEEEDRKVEEYREIGMRLKEFPEEDVRKARKLVSSFIR 120
           DDEWQARQREKTKELHRRRQEEDEEE+RKVEEYREIGMRLK FPEEDVRKARKLVSSFIR
Sbjct: 61  DDEWQARQREKTKELHRRRQEEDEEEERKVEEYREIGMRLKGFPEEDVRKARKLVSSFIR 120

Query: 121 AAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARCDDEKDAVRSLDLLYRRVETEILKRE 180
           A EEVEEKIEEAAEKGELTELVLLVIWNRLDLAR DDEKDA+RSLDLLYRRVETEILKRE
Sbjct: 121 AVEEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKRE 180

Query: 181 ATPAMRLLNELLNMYDGFDNEGWLKACRKCMVDTFPREDPFSILVPAGFDIDKHQGPLRP 240
           A+PAMRLLN+LLNMYD F++EGWLK CRK M+DTFPREDPFSILVPAGFDIDKHQG LRP
Sbjct: 181 ASPAMRLLNDLLNMYDNFNDEGWLKDCRKRMIDTFPREDPFSILVPAGFDIDKHQGQLRP 240

Query: 241 SLAVESDNTLLRVDFVREVDELLQEVGAVQSDVQNGNADSFDAESVASRLKQQEKQRTIR 300
           SL VE+DNTLLRVDFVREVDELLQEV A QS+VQN NAD FDAESVASRLK QEKQR++R
Sbjct: 241 SLEVEADNTLLRVDFVREVDELLQEVRADQSEVQNANADGFDAESVASRLKHQEKQRSVR 300

Query: 301 LVEALLDLAMNLKW 315
           LVE LL+LAMNL+W
Sbjct: 301 LVETLLELAMNLEW 314

[Close]

BLAST of CSPI06G21820 vs. NCBI nr
Match: XP_004140086.1 (protein PALE CRESS, chloroplastic [Cucumis sativus] >KGN47871.1 hypothetical protein Csa_002854 [Cucumis sativus])

HSP 1 Score: 600.9 bits (1548), Expect = 6.3e-168
Identity = 313/314 (99.68%), Postives = 313/314 (99.68%), Query Frame = 0


Query: 1   MEAQLLCLRFSSLPPLLSTTPILPKLWTSPSSHRYSSGLVLRRSLSKEEPLIDGLPKEYY 60
           MEAQLLCLRFSSLPPLLSTTPILPKLWTSPSSHR SSGLVLRRSLSKEEPLIDGLPKEYY
Sbjct: 1   MEAQLLCLRFSSLPPLLSTTPILPKLWTSPSSHRCSSGLVLRRSLSKEEPLIDGLPKEYY 60

Query: 61  DDEWQARQREKTKELHRRRQEEDEEEDRKVEEYREIGMRLKEFPEEDVRKARKLVSSFIR 120
           DDEWQARQREKTKELHRRRQEEDEEEDRKVEEYREIGMRLKEFPEEDVRKARKLVSSFIR
Sbjct: 61  DDEWQARQREKTKELHRRRQEEDEEEDRKVEEYREIGMRLKEFPEEDVRKARKLVSSFIR 120

Query: 121 AAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARCDDEKDAVRSLDLLYRRVETEILKRE 180
           AAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARCDDEKDAVRSLDLLYRRVETEILKRE
Sbjct: 121 AAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARCDDEKDAVRSLDLLYRRVETEILKRE 180

Query: 181 ATPAMRLLNELLNMYDGFDNEGWLKACRKCMVDTFPREDPFSILVPAGFDIDKHQGPLRP 240
           ATPAMRLLNELLNMYDGFDNEGWLKACRKCMVDTFPREDPFSILVPAGFDIDKHQGPLRP
Sbjct: 181 ATPAMRLLNELLNMYDGFDNEGWLKACRKCMVDTFPREDPFSILVPAGFDIDKHQGPLRP 240

Query: 241 SLAVESDNTLLRVDFVREVDELLQEVGAVQSDVQNGNADSFDAESVASRLKQQEKQRTIR 300
           SLAVESDNTLLRVDFVREVDELLQEVGAVQSDVQNGNADSFDAESVASRLKQQEKQRTIR
Sbjct: 241 SLAVESDNTLLRVDFVREVDELLQEVGAVQSDVQNGNADSFDAESVASRLKQQEKQRTIR 300

Query: 301 LVEALLDLAMNLKW 315
           LVEALLDLAMNLKW
Sbjct: 301 LVEALLDLAMNLKW 314

[Close]

BLAST of CSPI06G21820 vs. NCBI nr
Match: XP_008449384.1 (PREDICTED: protein PALE CRESS, chloroplastic [Cucumis melo] >TYK30069.1 protein PALE CRESS [Cucumis melo var. makuwa])

HSP 1 Score: 577.8 bits (1488), Expect = 5.7e-161
Identity = 302/314 (96.18%), Postives = 305/314 (97.13%), Query Frame = 0


Query: 1   MEAQLLCLRFSSLPPLLSTTPILPKLWTSPSSHRYSSGLVLRRSLSKEEPLIDGLPKEYY 60
           MEAQ+LCLRFSSLP LLSTTPIL KLWTS SS  YSSGLVLRRS SKEEPLIDGLPKEYY
Sbjct: 1   MEAQVLCLRFSSLPQLLSTTPILSKLWTSRSSKHYSSGLVLRRSFSKEEPLIDGLPKEYY 60

Query: 61  DDEWQARQREKTKELHRRRQEEDEEEDRKVEEYREIGMRLKEFPEEDVRKARKLVSSFIR 120
           DDEWQARQREKTKELHRRRQEEDEEEDRKV+EY EIGMRLKEFPEEDVRKARKLVSSFIR
Sbjct: 61  DDEWQARQREKTKELHRRRQEEDEEEDRKVQEYHEIGMRLKEFPEEDVRKARKLVSSFIR 120

Query: 121 AAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARCDDEKDAVRSLDLLYRRVETEILKRE 180
           AAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARCDDEKDAVRSLDLLYRRVETEILKRE
Sbjct: 121 AAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARCDDEKDAVRSLDLLYRRVETEILKRE 180

Query: 181 ATPAMRLLNELLNMYDGFDNEGWLKACRKCMVDTFPREDPFSILVPAGFDIDKHQGPLRP 240
           ATPAMRLLNELLNMYDGFDNEGWLKACRKCMVDTFPREDPFSILVPAGFDIDKHQGPLRP
Sbjct: 181 ATPAMRLLNELLNMYDGFDNEGWLKACRKCMVDTFPREDPFSILVPAGFDIDKHQGPLRP 240

Query: 241 SLAVESDNTLLRVDFVREVDELLQEVGAVQSDVQNGNADSFDAESVASRLKQQEKQRTIR 300
           SL VE+DNTLLRVDFVREVDELLQEVGAVQSDVQN NADSFDAESVASRLKQQEKQRTIR
Sbjct: 241 SLTVEADNTLLRVDFVREVDELLQEVGAVQSDVQNENADSFDAESVASRLKQQEKQRTIR 300

Query: 301 LVEALLDLAMNLKW 315
           LVEALLDLAMNLKW
Sbjct: 301 LVEALLDLAMNLKW 314

[Close]

BLAST of CSPI06G21820 vs. NCBI nr
Match: XP_038888470.1 (protein PALE CRESS, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 553.9 bits (1426), Expect = 8.9e-154
Identity = 292/314 (92.99%), Postives = 299/314 (95.22%), Query Frame = 0


Query: 1   MEAQLLCLRFSSLPPLLSTTPILPKLWTSPSSHRYSSGLVLRRSLSKEEPLIDGLPKEYY 60
           MEAQ+LCLRFS +PPLLST+ ILPKLWTS     YSSG VLRRSLSKEEPLIDGLPKEYY
Sbjct: 1   MEAQVLCLRFSPVPPLLSTSSILPKLWTSRFLKHYSSGPVLRRSLSKEEPLIDGLPKEYY 60

Query: 61  DDEWQARQREKTKELHRRRQEEDEEEDRKVEEYREIGMRLKEFPEEDVRKARKLVSSFIR 120
           DDEWQARQREKTKELHRRRQEEDEEEDRKVEEYREIGMRLK FPEEDVRKARKLVSSFIR
Sbjct: 61  DDEWQARQREKTKELHRRRQEEDEEEDRKVEEYREIGMRLKGFPEEDVRKARKLVSSFIR 120

Query: 121 AAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARCDDEKDAVRSLDLLYRRVETEILKRE 180
           AAEEVEEKIEEAAEKGELTELVLLVIWNRLDLAR DDEKDA+RSLDLLYRRVETEILKRE
Sbjct: 121 AAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARHDDEKDAIRSLDLLYRRVETEILKRE 180

Query: 181 ATPAMRLLNELLNMYDGFDNEGWLKACRKCMVDTFPREDPFSILVPAGFDIDKHQGPLRP 240
           ATPAMRLLNELLNMYDGFD+EGWLK CRK MVDTFPREDPFSILVPAGFDIDKHQGPLRP
Sbjct: 181 ATPAMRLLNELLNMYDGFDDEGWLKNCRKRMVDTFPREDPFSILVPAGFDIDKHQGPLRP 240

Query: 241 SLAVESDNTLLRVDFVREVDELLQEVGAVQSDVQNGNADSFDAESVASRLKQQEKQRTIR 300
           SL VE+DNTLLRVDFVREVDELLQEVGA QS+VQNGNAD FDAESVASRLKQQEKQRTIR
Sbjct: 241 SLEVEADNTLLRVDFVREVDELLQEVGADQSEVQNGNADGFDAESVASRLKQQEKQRTIR 300

Query: 301 LVEALLDLAMNLKW 315
           LVEALLDLAMNLKW
Sbjct: 301 LVEALLDLAMNLKW 314

[Close]

BLAST of CSPI06G21820 vs. NCBI nr
Match: XP_022931090.1 (protein PALE CRESS, chloroplastic [Cucurbita moschata])

HSP 1 Score: 505.8 bits (1301), Expect = 2.8e-139
Identity = 270/314 (85.99%), Postives = 285/314 (90.76%), Query Frame = 0


Query: 1   MEAQLLCLRFSSLPPLLSTTPILPKLWTSPSSHRYSSGLVLRRSLSKEEPLIDGLPKEYY 60
           M AQ+  LR S +PPL S +P LPKL TS     YSS  VLRRSLSKEEPLIDGLPKEYY
Sbjct: 1   MLAQVRWLRCSPVPPLPSASPTLPKLSTSYFLKLYSSRPVLRRSLSKEEPLIDGLPKEYY 60

Query: 61  DDEWQARQREKTKELHRRRQEEDEEEDRKVEEYREIGMRLKEFPEEDVRKARKLVSSFIR 120
           DDEWQARQREKTKELHRRRQEEDEEE+RKVEEYREIGMRLK FPEEDV KARKLVSSFIR
Sbjct: 61  DDEWQARQREKTKELHRRRQEEDEEEERKVEEYREIGMRLKGFPEEDVIKARKLVSSFIR 120

Query: 121 AAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARCDDEKDAVRSLDLLYRRVETEILKRE 180
           A EEVEEKIEEAAEKGELTELVLLVIWNRLDLAR DDEKDA+RSLDLLYRRVETEILKRE
Sbjct: 121 AVEEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKRE 180

Query: 181 ATPAMRLLNELLNMYDGFDNEGWLKACRKCMVDTFPREDPFSILVPAGFDIDKHQGPLRP 240
           A+PAMRLLN+LLNMYD F++EGWLK CRKCM+DTFPREDPFSILVPAGFDIDKHQG LRP
Sbjct: 181 ASPAMRLLNDLLNMYDNFNDEGWLKDCRKCMIDTFPREDPFSILVPAGFDIDKHQGQLRP 240

Query: 241 SLAVESDNTLLRVDFVREVDELLQEVGAVQSDVQNGNADSFDAESVASRLKQQEKQRTIR 300
           SL VE+DNTLLRVDFVREVDELLQEV A QS+VQN NAD FDAESVASRLKQQEKQRT+R
Sbjct: 241 SLEVEADNTLLRVDFVREVDELLQEVRADQSEVQNANADGFDAESVASRLKQQEKQRTVR 300

Query: 301 LVEALLDLAMNLKW 315
           LVE LL+LAMNL+W
Sbjct: 301 LVETLLELAMNLEW 314

[Close]

BLAST of CSPI06G21820 vs. NCBI nr
Match: XP_022995861.1 (protein PALE CRESS, chloroplastic [Cucurbita maxima])

HSP 1 Score: 503.1 bits (1294), Expect = 1.8e-138
Identity = 269/314 (85.67%), Postives = 285/314 (90.76%), Query Frame = 0


Query: 1   MEAQLLCLRFSSLPPLLSTTPILPKLWTSPSSHRYSSGLVLRRSLSKEEPLIDGLPKEYY 60
           M AQ+L LR S +PPL S +P LPKL TS     YSS  VLRRSLSKEEPLIDGLPKEYY
Sbjct: 1   MLAQVLWLRCSPVPPLPSASPTLPKLSTSYFLKLYSSRPVLRRSLSKEEPLIDGLPKEYY 60

Query: 61  DDEWQARQREKTKELHRRRQEEDEEEDRKVEEYREIGMRLKEFPEEDVRKARKLVSSFIR 120
           DDEWQARQREKTKELHRRRQEEDEEE+RKVEEYREIGMRLK FPEEDVRKARKLVSSFIR
Sbjct: 61  DDEWQARQREKTKELHRRRQEEDEEEERKVEEYREIGMRLKGFPEEDVRKARKLVSSFIR 120

Query: 121 AAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARCDDEKDAVRSLDLLYRRVETEILKRE 180
           A EEVEEKIEEAAEKGELTELVLLVIWNRLDLAR DDEKDA+RSLDLLYRRVETEILKRE
Sbjct: 121 AVEEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKRE 180

Query: 181 ATPAMRLLNELLNMYDGFDNEGWLKACRKCMVDTFPREDPFSILVPAGFDIDKHQGPLRP 240
           A+PAMRLLN+LLNMYD F++EGWLK CRK M+DTFPREDPFSILVPAGFDIDKHQG LRP
Sbjct: 181 ASPAMRLLNDLLNMYDNFNDEGWLKDCRKRMIDTFPREDPFSILVPAGFDIDKHQGQLRP 240

Query: 241 SLAVESDNTLLRVDFVREVDELLQEVGAVQSDVQNGNADSFDAESVASRLKQQEKQRTIR 300
           SL VE+DNTLLRVDFVREVDELLQEV A QS+VQN NAD FDAESVASRLK QEKQR++R
Sbjct: 241 SLEVEADNTLLRVDFVREVDELLQEVRADQSEVQNANADGFDAESVASRLKHQEKQRSVR 300

Query: 301 LVEALLDLAMNLKW 315
           LVE LL+LAMNL+W
Sbjct: 301 LVETLLELAMNLEW 314

[Close]

BLAST of CSPI06G21820 vs. TAIR 10
Match: AT2G48120.1 (pale cress protein (PAC) )

HSP 1 Score: 392.5 bits (1007), Expect = 3.2e-109
Identity = 206/305 (67.54%), Postives = 247/305 (80.98%), Query Frame = 0


Query: 10  FSSLPPLLSTTPILPKLWTSPSSHRYSSGLVLRRSLSKEEPLIDGLPKEYYDDEWQARQR 69
           FSS   + +T  +  +L  S +  R       R S + +E L++G+P EYYDDEWQARQR
Sbjct: 15  FSSPRVISATKKLTTELSISTAKFR------RRCSGNNDEVLLEGMPPEYYDDEWQARQR 74

Query: 70  EKTKELHRRRQEEDEEEDRKVEEYREIGMRLKEFPEEDVRKARKLVSSFIRAAEEVEEKI 129
           EKTKEL R ++EE+EEE+RK+EEYREIG RLKEFPE+D+RKARKLVSSFIRAAEEVEE+I
Sbjct: 75  EKTKELRRMQREEEEEEERKIEEYREIGTRLKEFPEQDLRKARKLVSSFIRAAEEVEERI 134

Query: 130 EEAAEKGELTELVLLVIWNRLDLARCDDEKDAVRSLDLLYRRVETEILKREATPAMRLLN 189
           EEAAEKGEL ELVL++IWNRLDLAR DDEKDA+RSLDLLYRRVETEILKR+A+PAM+LLN
Sbjct: 135 EEAAEKGELDELVLMIIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKRQASPAMKLLN 194

Query: 190 ELLNMYDGFDNEGWLKACRKCMVDTFPREDPFSILVPAGFDIDKHQGPLRPSLAVESDNT 249
           +LLNM+DGF+++ WLK CRK M +TFPREDPFSIL+P GFDID HQG LRP +  E+DNT
Sbjct: 195 DLLNMHDGFEDDAWLKDCRKRMAETFPREDPFSILMPPGFDIDMHQGQLRPPIETETDNT 254

Query: 250 LLRVDFVREVDELLQEVGAVQSDVQNGNADSFDAESVASRLKQQEKQRTIRLVEALLDLA 309
           LLRVDFVREVD LLQEV   +        +  D E++A + KQQEKQRTIR +EA+LDLA
Sbjct: 255 LLRVDFVREVDALLQEVRIEEDATTGSKGEGLDPEAIALKFKQQEKQRTIRQIEAILDLA 313

Query: 310 MNLKW 315
           +NLKW
Sbjct: 315 LNLKW 313

[Close]

BLAST of CSPI06G21820 vs. TAIR 10
Match: AT2G48120.2 (pale cress protein (PAC) )

HSP 1 Score: 373.6 bits (958), Expect = 1.5e-103
Identity = 200/305 (65.57%), Postives = 241/305 (79.02%), Query Frame = 0


Query: 10  FSSLPPLLSTTPILPKLWTSPSSHRYSSGLVLRRSLSKEEPLIDGLPKEYYDDEWQARQR 69
           FSS   + +T  +  +L  S +  R       R S + +E L++G+P EYYDD      R
Sbjct: 15  FSSPRVISATKKLTTELSISTAKFR------RRCSGNNDEVLLEGMPPEYYDD------R 74

Query: 70  EKTKELHRRRQEEDEEEDRKVEEYREIGMRLKEFPEEDVRKARKLVSSFIRAAEEVEEKI 129
           EKTKEL R ++EE+EEE+RK+EEYREIG RLKEFPE+D+RKARKLVSSFIRAAEEVEE+I
Sbjct: 75  EKTKELRRMQREEEEEEERKIEEYREIGTRLKEFPEQDLRKARKLVSSFIRAAEEVEERI 134

Query: 130 EEAAEKGELTELVLLVIWNRLDLARCDDEKDAVRSLDLLYRRVETEILKREATPAMRLLN 189
           EEAAEKGEL ELVL++IWNRLDLAR DDEKDA+RSLDLLYRRVETEILKR+A+PAM+LLN
Sbjct: 135 EEAAEKGELDELVLMIIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKRQASPAMKLLN 194

Query: 190 ELLNMYDGFDNEGWLKACRKCMVDTFPREDPFSILVPAGFDIDKHQGPLRPSLAVESDNT 249
           +LLNM+DGF+++ WLK CRK M +TFPREDPFSIL+P GFDID HQG LRP +  E+DNT
Sbjct: 195 DLLNMHDGFEDDAWLKDCRKRMAETFPREDPFSILMPPGFDIDMHQGQLRPPIETETDNT 254

Query: 250 LLRVDFVREVDELLQEVGAVQSDVQNGNADSFDAESVASRLKQQEKQRTIRLVEALLDLA 309
           LLRVDFVREVD LLQEV   +        +  D E++A + KQQEKQRTIR +EA+LDLA
Sbjct: 255 LLRVDFVREVDALLQEVRIEEDATTGSKGEGLDPEAIALKFKQQEKQRTIRQIEAILDLA 307

Query: 310 MNLKW 315
           +NLKW
Sbjct: 315 LNLKW 307

The following BLAST results are available for this feature:

BLAST of CSPI06G21820 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39089	4.5e-108	67.54	Protein PALE CRESS, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAC PE=2 SV...	[more]

BLAST of CSPI06G21820 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KJC6	3.1e-168	99.68	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G408790 PE=4 SV=1	[more]
A0A5D3E2R9	2.8e-161	96.18	Protein PALE CRESS OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G0...	[more]
A0A1S3BMU2	2.8e-161	96.18	protein PALE CRESS, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103491280 PE=4 S...	[more]
A0A6J1EYI4	1.3e-139	85.99	protein PALE CRESS, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111437380 ...	[more]
A0A6J1K329	8.7e-139	85.67	protein PALE CRESS, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111491264 PE...	[more]

BLAST of CSPI06G21820 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140086.1	6.3e-168	99.68	protein PALE CRESS, chloroplastic [Cucumis sativus] >KGN47871.1 hypothetical pro...	[more]
XP_008449384.1	5.7e-161	96.18	PREDICTED: protein PALE CRESS, chloroplastic [Cucumis melo] >TYK30069.1 protein ...	[more]
XP_038888470.1	8.9e-154	92.99	protein PALE CRESS, chloroplastic isoform X1 [Benincasa hispida]	[more]
XP_022931090.1	2.8e-139	85.99	protein PALE CRESS, chloroplastic [Cucurbita moschata]	[more]
XP_022995861.1	1.8e-138	85.67	protein PALE CRESS, chloroplastic [Cucurbita maxima]	[more]

BLAST of CSPI06G21820 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G48120.1	3.2e-109	67.54	pale cress protein (PAC)	[more]
AT2G48120.2	1.5e-103	65.57	pale cress protein (PAC)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 115..142
IPR034563	Protein PALE CRESS	PANTHER	PTHR37219	PROTEIN PALE CRESS, CHLOROPLASTIC	coord: 1..314

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G21820.1	CSPI06G21820.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071482	cellular response to light stimulus
biological_process	GO:0010239	chloroplast mRNA processing
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0009965	leaf morphogenesis
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0048366	leaf development
cellular_component	GO:0009501	amyloplast
cellular_component	GO:0042644	chloroplast nucleoid
cellular_component	GO:0009509	chromoplast
cellular_component	GO:0009513	etioplast
cellular_component	GO:0009537	proplastid
cellular_component	GO:0009536	plastid
molecular_function	GO:0043621	protein self-association
molecular_function	GO:0019843	rRNA binding