CSPI06G21760 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI06G21760
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionGLTSCR1 domain-containing protein
LocationChr6: 19731076 .. 19731814 (+)
RNA-Seq ExpressionCSPI06G21760
SyntenyCSPI06G21760
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGGTCTTTGCCTATTCCTTTTGTTGGTTGGTTATTTGTATTTTCTTCCGTTCTCTTATTACAATTTGATCAATCGTCGACGTAATGTGCAAAAAACATTGTACAGGTTGCTGCCATATCATGTGGTGGCTGACTATGAGGCTGAAGAAGATGATAGAATCCTTGACTCTGATCCAACTGGCCAAATGCTGTCACGCTCACAACAGTGGGACCATAACATCTCGGCAAAAATTTCCGAGTTCATTGCCACTTTTGAGAAACAGGTGTTGGCCTTCAACATCATAACTCGCAAAAGAGCATTGGGGGAGTTCCGTTCAGAAGAAAGATTGATGTTTGAACAAGCCCTTATGCAAGAAGAGAAACGGAACCTTCAGGAACTGAAAGCTGAGATCGAGTTGAGAGGGAAAGCAAGCAAAGAGGCTCATGATGCCAAAACGCGAATGGCCGCTATGATGCAGACCGACCAAACACGGAGTGAACCACAGGCTAATGAAATGATGATTCGAGCTTCCATGAGAACAGGTGCGCATGTTGGATCCCAAAGCAACGATATTCCGGTTGGGGACCAGGAGCAACCTCATCCAAGTGAAATGATCAATGGATGGGGAAACAACACACAGGGAGATGAGAAGGAAGCATCAGAGGACTTATTGAATGATGAGGAGGCTGAGAATGGCGACACAGGCATGCATGATAGTTGGCGCGAAGTTGGGGAATTTGATCTAAATTCGAGATGA

mRNA sequence

ATGTGGTCTTTGCCTATTCCTTTTGTTGGTTGGTTGCTGCCATATCATGTGGTGGCTGACTATGAGGCTGAAGAAGATGATAGAATCCTTGACTCTGATCCAACTGGCCAAATGCTGTCACGCTCACAACAGTGGGACCATAACATCTCGGCAAAAATTTCCGAGTTCATTGCCACTTTTGAGAAACAGGTGTTGGCCTTCAACATCATAACTCGCAAAAGAGCATTGGGGGAGTTCCGTTCAGAAGAAAGATTGATGTTTGAACAAGCCCTTATGCAAGAAGAGAAACGGAACCTTCAGGAACTGAAAGCTGAGATCGAGTTGAGAGGGAAAGCAAGCAAAGAGGCTCATGATGCCAAAACGCGAATGGCCGCTATGATGCAGACCGACCAAACACGGAGTGAACCACAGGCTAATGAAATGATGATTCGAGCTTCCATGAGAACAGGTGCGCATGTTGGATCCCAAAGCAACGATATTCCGGTTGGGGACCAGGAGCAACCTCATCCAAGTGAAATGATCAATGGATGGGGAAACAACACACAGGGAGATGAGAAGGAAGCATCAGAGGACTTATTGAATGATGAGGAGGCTGAGAATGGCGACACAGGCATGCATGATAGTTGGCGCGAAGTTGGGGAATTTGATCTAAATTCGAGATGA

Coding sequence (CDS)

ATGTGGTCTTTGCCTATTCCTTTTGTTGGTTGGTTGCTGCCATATCATGTGGTGGCTGACTATGAGGCTGAAGAAGATGATAGAATCCTTGACTCTGATCCAACTGGCCAAATGCTGTCACGCTCACAACAGTGGGACCATAACATCTCGGCAAAAATTTCCGAGTTCATTGCCACTTTTGAGAAACAGGTGTTGGCCTTCAACATCATAACTCGCAAAAGAGCATTGGGGGAGTTCCGTTCAGAAGAAAGATTGATGTTTGAACAAGCCCTTATGCAAGAAGAGAAACGGAACCTTCAGGAACTGAAAGCTGAGATCGAGTTGAGAGGGAAAGCAAGCAAAGAGGCTCATGATGCCAAAACGCGAATGGCCGCTATGATGCAGACCGACCAAACACGGAGTGAACCACAGGCTAATGAAATGATGATTCGAGCTTCCATGAGAACAGGTGCGCATGTTGGATCCCAAAGCAACGATATTCCGGTTGGGGACCAGGAGCAACCTCATCCAAGTGAAATGATCAATGGATGGGGAAACAACACACAGGGAGATGAGAAGGAAGCATCAGAGGACTTATTGAATGATGAGGAGGCTGAGAATGGCGACACAGGCATGCATGATAGTTGGCGCGAAGTTGGGGAATTTGATCTAAATTCGAGATGA

Protein sequence

MWSLPIPFVGWLLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATFEKQVLAFNIITRKRALGEFRSEERLMFEQALMQEEKRNLQELKAEIELRGKASKEAHDAKTRMAAMMQTDQTRSEPQANEMMIRASMRTGAHVGSQSNDIPVGDQEQPHPSEMINGWGNNTQGDEKEASEDLLNDEEAENGDTGMHDSWREVGEFDLNSR*
Homology
BLAST of CSPI06G21760 vs. ExPASy TrEMBL
Match: A0A0A0KJB5 (GLTSCR1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G408200 PE=4 SV=1)

HSP 1 Score: 430.6 bits (1106), Expect = 3.9e-117
Identity = 219/220 (99.55%), Postives = 220/220 (100.00%), Query Frame = 0

Query: 1   MWSLPIPFVGWLLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATF 60
           MWSLPIPFVGWLLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATF
Sbjct: 1   MWSLPIPFVGWLLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATF 60

Query: 61  EKQVLAFNIITRKRALGEFRSEERLMFEQALMQEEKRNLQELKAEIELRGKASKEAHDAK 120
           EKQVLAFNIITRKRALGEFRSEERLMFEQALMQEEKRNLQELKAEIELRGKASKEAHDAK
Sbjct: 61  EKQVLAFNIITRKRALGEFRSEERLMFEQALMQEEKRNLQELKAEIELRGKASKEAHDAK 120

Query: 121 TRMAAMMQTDQTRSEPQANEMMIRASMRTGAHVGSQSNDIPVGDQEQPHPSEMINGWGNN 180
           TRMAAMMQTDQTRSEPQANEMMIRASMRTGAHVGSQSND+PVGDQEQPHPSEMINGWGNN
Sbjct: 121 TRMAAMMQTDQTRSEPQANEMMIRASMRTGAHVGSQSNDVPVGDQEQPHPSEMINGWGNN 180

Query: 181 TQGDEKEASEDLLNDEEAENGDTGMHDSWREVGEFDLNSR 221
           TQGDEKEASEDLLNDEEAENGDTGMHDSWREVGEFDLNSR
Sbjct: 181 TQGDEKEASEDLLNDEEAENGDTGMHDSWREVGEFDLNSR 220

BLAST of CSPI06G21760 vs. ExPASy TrEMBL
Match: A0A1S3BL97 (bromodomain-containing protein DDB_G0280777 OS=Cucumis melo OX=3656 GN=LOC103491276 PE=4 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 3.3e-108
Identity = 206/209 (98.56%), Postives = 209/209 (100.00%), Query Frame = 0

Query: 12  LLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATFEKQVLAFNIIT 71
           LLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATFEKQVLAFNIIT
Sbjct: 163 LLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATFEKQVLAFNIIT 222

Query: 72  RKRALGEFRSEERLMFEQALMQEEKRNLQELKAEIELRGKASKEAHDAKTRMAAMMQTDQ 131
           RKRALGEFRSEERLMFEQALMQEEKRNLQELKAEIELRGKASKEAHDAKTRMAAMMQTDQ
Sbjct: 223 RKRALGEFRSEERLMFEQALMQEEKRNLQELKAEIELRGKASKEAHDAKTRMAAMMQTDQ 282

Query: 132 TRSEPQANEMMIRASMRTGAHVGSQSNDIPVGDQEQPHPSEMINGWGNNTQGDEKEASED 191
           TRSEPQANEMMIRASMRTGAHVGSQS+D+PVGDQEQPHPSEMINGWGNNTQGDEKEASED
Sbjct: 283 TRSEPQANEMMIRASMRTGAHVGSQSSDVPVGDQEQPHPSEMINGWGNNTQGDEKEASED 342

Query: 192 LLNDEEAENGDTGMHDSWREVGEFDLNSR 221
           LLNDEEAENGDTGMHDSWREVGEFDLN+R
Sbjct: 343 LLNDEEAENGDTGMHDSWREVGEFDLNTR 371

BLAST of CSPI06G21760 vs. ExPASy TrEMBL
Match: A0A5D3E3C4 (Bromodomain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G00540 PE=4 SV=1)

HSP 1 Score: 367.1 bits (941), Expect = 5.2e-98
Identity = 191/193 (98.96%), Postives = 193/193 (100.00%), Query Frame = 0

Query: 12  LLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATFEKQVLAFNIIT 71
           LLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATFEKQVLAFNIIT
Sbjct: 100 LLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATFEKQVLAFNIIT 159

Query: 72  RKRALGEFRSEERLMFEQALMQEEKRNLQELKAEIELRGKASKEAHDAKTRMAAMMQTDQ 131
           RKRALGEFRSEERLMFEQALMQEEKRNLQELKAEIELRGKASKEAHDAKTRMAAMMQTDQ
Sbjct: 160 RKRALGEFRSEERLMFEQALMQEEKRNLQELKAEIELRGKASKEAHDAKTRMAAMMQTDQ 219

Query: 132 TRSEPQANEMMIRASMRTGAHVGSQSNDIPVGDQEQPHPSEMINGWGNNTQGDEKEASED 191
           TRSEPQANEMMIRASMRTGAHVGSQS+D+PVGDQEQPHPSEMINGWGNNTQGDEKEASED
Sbjct: 220 TRSEPQANEMMIRASMRTGAHVGSQSSDVPVGDQEQPHPSEMINGWGNNTQGDEKEASED 279

Query: 192 LLNDEEAENGDTG 205
           LLNDEEAENGDTG
Sbjct: 280 LLNDEEAENGDTG 292

BLAST of CSPI06G21760 vs. ExPASy TrEMBL
Match: A0A6J1IDW9 (ras-interacting protein RIP3 OS=Cucurbita maxima OX=3661 GN=LOC111471787 PE=4 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 6.8e-98
Identity = 195/214 (91.12%), Postives = 200/214 (93.46%), Query Frame = 0

Query: 12  LLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATFEKQVLAFNIIT 71
           LLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFI TFEKQVLAFNIIT
Sbjct: 163 LLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIGTFEKQVLAFNIIT 222

Query: 72  RKRALGEFRSEERLMFEQALMQEEKRNLQELKAEIELRGKASKEAHDAKTRMAAMMQTDQ 131
           RKRALGEFRSEERLMFEQALMQEEKR L ELKAEIELRGKASKEA DAKTRMAAMMQ DQ
Sbjct: 223 RKRALGEFRSEERLMFEQALMQEEKRKLLELKAEIELRGKASKEAQDAKTRMAAMMQPDQ 282

Query: 132 TRSEPQANEMMIRASMRTGAHVGSQSNDIP----VGDQEQPHPSEMINGWGNN-TQGDEK 191
           TR E QANEMM+RA MRTGAHVGSQS+D+P    VG+QEQ HPSEMINGWGNN TQGDEK
Sbjct: 283 TRGETQANEMMVRAPMRTGAHVGSQSSDVPVGHGVGEQEQVHPSEMINGWGNNTTQGDEK 342

Query: 192 EASEDLLNDEEAENGDTGMHDSWREVGEFDLNSR 221
           EASEDLLNDEEAENGDTGMHDSWREVGEFDLN+R
Sbjct: 343 EASEDLLNDEEAENGDTGMHDSWREVGEFDLNTR 376

BLAST of CSPI06G21760 vs. ExPASy TrEMBL
Match: A0A6J1EXS9 (PH domain-containing protein DDB_G0275795-like OS=Cucurbita moschata OX=3662 GN=LOC111439565 PE=4 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 1.2e-97
Identity = 195/214 (91.12%), Postives = 200/214 (93.46%), Query Frame = 0

Query: 12  LLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATFEKQVLAFNIIT 71
           LLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFI TFEKQVLAFNIIT
Sbjct: 169 LLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIGTFEKQVLAFNIIT 228

Query: 72  RKRALGEFRSEERLMFEQALMQEEKRNLQELKAEIELRGKASKEAHDAKTRMAAMMQTDQ 131
           RKRALGEFRSEERLMFEQALMQEEKR L ELKAEIELRGKASKEA DAKTRMAAMMQTDQ
Sbjct: 229 RKRALGEFRSEERLMFEQALMQEEKRKLLELKAEIELRGKASKEAQDAKTRMAAMMQTDQ 288

Query: 132 TRSEPQANEMMIRASMRTGAHVGSQSNDIP----VGDQEQPHPSEMINGWGNN-TQGDEK 191
           TR E QANEMM+RA MRTGAHVGSQS+D+P    VG+QEQ HPSEMINGW NN TQGDEK
Sbjct: 289 TRGETQANEMMVRAPMRTGAHVGSQSSDVPVGHGVGEQEQVHPSEMINGWRNNTTQGDEK 348

Query: 192 EASEDLLNDEEAENGDTGMHDSWREVGEFDLNSR 221
           EASEDLLNDEEAENGDTGMHDSWREVGEFDLN+R
Sbjct: 349 EASEDLLNDEEAENGDTGMHDSWREVGEFDLNTR 382

BLAST of CSPI06G21760 vs. NCBI nr
Match: KAE8647314.1 (hypothetical protein Csa_003272 [Cucumis sativus])

HSP 1 Score: 404.1 bits (1037), Expect = 8.0e-109
Identity = 208/209 (99.52%), Postives = 209/209 (100.00%), Query Frame = 0

Query: 12  LLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATFEKQVLAFNIIT 71
           LLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATFEKQVLAFNIIT
Sbjct: 38  LLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATFEKQVLAFNIIT 97

Query: 72  RKRALGEFRSEERLMFEQALMQEEKRNLQELKAEIELRGKASKEAHDAKTRMAAMMQTDQ 131
           RKRALGEFRSEERLMFEQALMQEEKRNLQELKAEIELRGKASKEAHDAKTRMAAMMQTDQ
Sbjct: 98  RKRALGEFRSEERLMFEQALMQEEKRNLQELKAEIELRGKASKEAHDAKTRMAAMMQTDQ 157

Query: 132 TRSEPQANEMMIRASMRTGAHVGSQSNDIPVGDQEQPHPSEMINGWGNNTQGDEKEASED 191
           TRSEPQANEMMIRASMRTGAHVGSQSND+PVGDQEQPHPSEMINGWGNNTQGDEKEASED
Sbjct: 158 TRSEPQANEMMIRASMRTGAHVGSQSNDVPVGDQEQPHPSEMINGWGNNTQGDEKEASED 217

Query: 192 LLNDEEAENGDTGMHDSWREVGEFDLNSR 221
           LLNDEEAENGDTGMHDSWREVGEFDLNSR
Sbjct: 218 LLNDEEAENGDTGMHDSWREVGEFDLNSR 246

BLAST of CSPI06G21760 vs. NCBI nr
Match: XP_004140082.2 (putative uncharacterized protein DDB_G0271606 [Cucumis sativus])

HSP 1 Score: 404.1 bits (1037), Expect = 8.0e-109
Identity = 208/209 (99.52%), Postives = 209/209 (100.00%), Query Frame = 0

Query: 12  LLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATFEKQVLAFNIIT 71
           LLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATFEKQVLAFNIIT
Sbjct: 165 LLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATFEKQVLAFNIIT 224

Query: 72  RKRALGEFRSEERLMFEQALMQEEKRNLQELKAEIELRGKASKEAHDAKTRMAAMMQTDQ 131
           RKRALGEFRSEERLMFEQALMQEEKRNLQELKAEIELRGKASKEAHDAKTRMAAMMQTDQ
Sbjct: 225 RKRALGEFRSEERLMFEQALMQEEKRNLQELKAEIELRGKASKEAHDAKTRMAAMMQTDQ 284

Query: 132 TRSEPQANEMMIRASMRTGAHVGSQSNDIPVGDQEQPHPSEMINGWGNNTQGDEKEASED 191
           TRSEPQANEMMIRASMRTGAHVGSQSND+PVGDQEQPHPSEMINGWGNNTQGDEKEASED
Sbjct: 285 TRSEPQANEMMIRASMRTGAHVGSQSNDVPVGDQEQPHPSEMINGWGNNTQGDEKEASED 344

Query: 192 LLNDEEAENGDTGMHDSWREVGEFDLNSR 221
           LLNDEEAENGDTGMHDSWREVGEFDLNSR
Sbjct: 345 LLNDEEAENGDTGMHDSWREVGEFDLNSR 373

BLAST of CSPI06G21760 vs. NCBI nr
Match: XP_008449378.1 (PREDICTED: bromodomain-containing protein DDB_G0280777 [Cucumis melo])

HSP 1 Score: 401.0 bits (1029), Expect = 6.8e-108
Identity = 206/209 (98.56%), Postives = 209/209 (100.00%), Query Frame = 0

Query: 12  LLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATFEKQVLAFNIIT 71
           LLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATFEKQVLAFNIIT
Sbjct: 163 LLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATFEKQVLAFNIIT 222

Query: 72  RKRALGEFRSEERLMFEQALMQEEKRNLQELKAEIELRGKASKEAHDAKTRMAAMMQTDQ 131
           RKRALGEFRSEERLMFEQALMQEEKRNLQELKAEIELRGKASKEAHDAKTRMAAMMQTDQ
Sbjct: 223 RKRALGEFRSEERLMFEQALMQEEKRNLQELKAEIELRGKASKEAHDAKTRMAAMMQTDQ 282

Query: 132 TRSEPQANEMMIRASMRTGAHVGSQSNDIPVGDQEQPHPSEMINGWGNNTQGDEKEASED 191
           TRSEPQANEMMIRASMRTGAHVGSQS+D+PVGDQEQPHPSEMINGWGNNTQGDEKEASED
Sbjct: 283 TRSEPQANEMMIRASMRTGAHVGSQSSDVPVGDQEQPHPSEMINGWGNNTQGDEKEASED 342

Query: 192 LLNDEEAENGDTGMHDSWREVGEFDLNSR 221
           LLNDEEAENGDTGMHDSWREVGEFDLN+R
Sbjct: 343 LLNDEEAENGDTGMHDSWREVGEFDLNTR 371

BLAST of CSPI06G21760 vs. NCBI nr
Match: XP_038887907.1 (involucrin [Benincasa hispida])

HSP 1 Score: 387.1 bits (993), Expect = 1.0e-103
Identity = 202/213 (94.84%), Postives = 207/213 (97.18%), Query Frame = 0

Query: 12  LLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATFEKQVLAFNIIT 71
           LLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATFEKQVLAFNIIT
Sbjct: 161 LLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATFEKQVLAFNIIT 220

Query: 72  RKRALGEFRSEERLMFEQALMQEEKRNLQELKAEIELRGKASKEAHDAKTRMAAMMQTDQ 131
           RKRALGEFRSEERLMFEQALMQEEKRNL ELKAEIELRGKASKEAHDAKTRMAAMMQTDQ
Sbjct: 221 RKRALGEFRSEERLMFEQALMQEEKRNLLELKAEIELRGKASKEAHDAKTRMAAMMQTDQ 280

Query: 132 TRSEPQANEMMIRASMRTGAHVGSQSNDIPV----GDQEQPHPSEMINGWGNNTQGDEKE 191
           TRSEPQANEMM+RASMRTGAHVGSQS+D+PV    G+QEQ HP+EMINGWGNNTQGDEKE
Sbjct: 281 TRSEPQANEMMVRASMRTGAHVGSQSSDVPVGHGGGEQEQVHPNEMINGWGNNTQGDEKE 340

Query: 192 ASEDLLNDEEAENGDTGMHDSWREVGEFDLNSR 221
           ASEDLLNDEEAENGDTGMHDSWREVGEFDLNSR
Sbjct: 341 ASEDLLNDEEAENGDTGMHDSWREVGEFDLNSR 373

BLAST of CSPI06G21760 vs. NCBI nr
Match: KAG6571746.1 (hypothetical protein SDJN03_28474, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 369.0 bits (946), Expect = 2.8e-98
Identity = 196/214 (91.59%), Postives = 201/214 (93.93%), Query Frame = 0

Query: 12  LLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATFEKQVLAFNIIT 71
           LLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFI TFEKQVLAFNIIT
Sbjct: 169 LLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIGTFEKQVLAFNIIT 228

Query: 72  RKRALGEFRSEERLMFEQALMQEEKRNLQELKAEIELRGKASKEAHDAKTRMAAMMQTDQ 131
           RKRALGEFRSEERLMFEQALMQEEKR L ELKAEIELRGKASKEA DAKTRMAAMMQTDQ
Sbjct: 229 RKRALGEFRSEERLMFEQALMQEEKRKLLELKAEIELRGKASKEAQDAKTRMAAMMQTDQ 288

Query: 132 TRSEPQANEMMIRASMRTGAHVGSQSNDIP----VGDQEQPHPSEMINGWGNN-TQGDEK 191
           TR E QANEMM+RA MRTGAHVGSQS+D+P    VG+QEQ HPSEMINGWGNN TQGDEK
Sbjct: 289 TRGETQANEMMVRAPMRTGAHVGSQSSDVPVGHGVGEQEQVHPSEMINGWGNNTTQGDEK 348

Query: 192 EASEDLLNDEEAENGDTGMHDSWREVGEFDLNSR 221
           EASEDLLNDEEAENGDTGMHDSWREVGEFDLN+R
Sbjct: 349 EASEDLLNDEEAENGDTGMHDSWREVGEFDLNTR 382

BLAST of CSPI06G21760 vs. TAIR 10
Match: AT5G17510.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 250.0 bits (637), Expect = 1.8e-66
Identity = 140/214 (65.42%), Postives = 171/214 (79.91%), Query Frame = 0

Query: 12  LLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATFEKQVLAFNIIT 71
           LLPYHVVADYEAEEDDRILDSDPTGQ LSRSQQWD+NI+AK++EF ATFEKQ LAFNIIT
Sbjct: 161 LLPYHVVADYEAEEDDRILDSDPTGQALSRSQQWDNNIAAKVAEFTATFEKQALAFNIIT 220

Query: 72  RKRALGEFRSEERLMFEQALMQEEKRNLQELKAEIELRGKASKEAHDAKTRMAAMMQTDQ 131
           RKRA+GEFRSEERLM EQAL+Q+E++ L ELKAE++ R KA +EA +AK RMAA+ Q  Q
Sbjct: 221 RKRAMGEFRSEERLMVEQALLQDERKALIELKAEMD-REKAGREAQEAKLRMAALAQAGQ 280

Query: 132 TRSEPQANEMMIRASMRTGAHVGSQSNDI----PVGDQ-EQPHPSEMINGWGNNTQGDEK 191
           ++S     E+M R  +R  A VG+Q ++I     +G+Q    +P EM+NGWGNN+Q ++K
Sbjct: 281 SQSHA---EIMARNPLRANA-VGNQGSNIQLSHEMGEQGRNMNPDEMMNGWGNNSQREDK 340

Query: 192 EASEDLLNDEEAENGDTGMHDSWREVGEFDLNSR 221
           E SED LNDEE ENG+TG  ++WRE GEFDLNSR
Sbjct: 341 EPSEDFLNDEENENGETGEQENWREAGEFDLNSR 369

BLAST of CSPI06G21760 vs. TAIR 10
Match: AT3G03460.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17510.1); Has 19732 Blast hits to 8747 proteins in 456 species: Archae - 0; Bacteria - 449; Metazoa - 7438; Fungi - 2099; Plants - 1550; Viruses - 53; Other Eukaryotes - 8143 (source: NCBI BLink). )

HSP 1 Score: 156.8 bits (395), Expect = 2.1e-38
Identity = 109/222 (49.10%), Postives = 139/222 (62.61%), Query Frame = 0

Query: 12  LLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATFEKQVLAFNIIT 71
           LLPYHVVADYEAEEDD I DS+ T Q L R QQWD+NI+AK++EF ATFE QV AF+ I 
Sbjct: 152 LLPYHVVADYEAEEDDSIFDSNTTSQTLPRCQQWDNNIAAKVAEFTATFEGQVQAFDRII 211

Query: 72  RKRALGEFRSEERLMFEQALMQEEKRNLQELKAEIELRGKASKEAHDAKTRMAAMMQ-TD 131
           +KR+ G+ R EERLM EQ L+ +E+    +L  E+        +A DA+ RMAA+ Q   
Sbjct: 212 QKRSDGD-RVEERLMMEQVLLNDERNACIQLDREM--------KAQDARLRMAALAQAAG 271

Query: 132 QTRSEPQAN---EMMIRASMRTGAHVGSQSNDIPVGDQ-EQPHPSEM---INGWG----- 191
           Q R+E       EMM R  +R  A +G+       G+Q    +P+EM   +NGWG     
Sbjct: 272 QARAEESQQSHAEMMARNPLRANA-IGNH------GEQGRNMNPNEMMLLMNGWGNNNNN 331

Query: 192 NNTQGDEKEASEDLLNDEEAENGDTGMHDSWREVGEFDLNSR 221
           NN+Q +EKE  ED LNDEE ENG+   H+ WR  G+FDLN R
Sbjct: 332 NNSQKEEKEPLEDFLNDEENENGE---HEKWRRSGDFDLNIR 354

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KJB53.9e-11799.55GLTSCR1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G408200 PE=... [more]
A0A1S3BL973.3e-10898.56bromodomain-containing protein DDB_G0280777 OS=Cucumis melo OX=3656 GN=LOC103491... [more]
A0A5D3E3C45.2e-9898.96Bromodomain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
A0A6J1IDW96.8e-9891.12ras-interacting protein RIP3 OS=Cucurbita maxima OX=3661 GN=LOC111471787 PE=4 SV... [more]
A0A6J1EXS91.2e-9791.12PH domain-containing protein DDB_G0275795-like OS=Cucurbita moschata OX=3662 GN=... [more]
Match NameE-valueIdentityDescription
KAE8647314.18.0e-10999.52hypothetical protein Csa_003272 [Cucumis sativus][more]
XP_004140082.28.0e-10999.52putative uncharacterized protein DDB_G0271606 [Cucumis sativus][more]
XP_008449378.16.8e-10898.56PREDICTED: bromodomain-containing protein DDB_G0280777 [Cucumis melo][more]
XP_038887907.11.0e-10394.84involucrin [Benincasa hispida][more]
KAG6571746.12.8e-9891.59hypothetical protein SDJN03_28474, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
AT5G17510.11.8e-6665.42unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT3G03460.12.1e-3849.10unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 85..112
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 199..214
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 151..220
NoneNo IPR availablePANTHERPTHR15572GLIOMA TUMOR SUPPRESSOR CANDIDATE REGION GENE 1coord: 12..220
NoneNo IPR availablePANTHERPTHR15572:SF6MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT-LIKE PROTEINcoord: 12..220
IPR015671GLTSCR protein, conserved regionPFAMPF15249GLTSCR1coord: 12..103
e-value: 7.0E-15
score: 55.4

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI06G21760.1CSPI06G21760.1mRNA