CSPI06G19640 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTCAATCATTACCCAAAACATATATCATAATAATAATAGCAATAACTTTCTCAAATCTCATACCCATGAATTGAAATCCTAAAATTTTTGGCTTCAGAGTCCAAAGTAAGCAAATTTTTATACTCTTTAACCCAAAATAGTTCATTGTTGAAACAAATAATGTTTTAACTTTTGGAAGTATAAAATTATCTAGAAATATCATAACTGAAAAAGTAGGATAGAAGAGAGAAAAAAAAAGGTGAATAGAGACACACTGGCACCGCCCTCTACATTCTCTTCCTCACTAGAAATCTCCATTGTCCCATAATTCTCTTTTTCTTTCTCTCTCTTTTTTCCGGTTTTGCCACTTCTCTTAAATCCACAATTCTTCTCTTCTCTCATCTGTACTCTCTCAGAATCTTTCCTCAACCATGGCGGTTCTCTTGCTCTGTTATCTGATATTCTTGGCCTTCACTTCCCATTCAAGTAAGCTTCTGGAATCTTCATTTTCATTTCTTGGTTTTGTTTACTGGCTTCCATTTGAAGTTTTTCTGCAGCTTAAAATGAGGTTTTACACAAGAATCGTTGAAACCCTCTGAAGGGTTTTCAAGAAATCAGTGGAAATTAGAAAATAAGCTGTTGGGTTAATTTAAAAAAAAAAAAATCTGATGAACCCTTTTTCTGGAATCTTGTTTAGGTGCTACTTATTGCATTTGTAAAGATGGACTGAGTGATCAAGCCCTTCAGAAAAGTTTGGATTATGCTTGTGGAGCTGGAGCTGATTGTACACCAATCCTTCAAAATGGCCCTTGTTATCAACCCAATACTGTGAAAGATCATTGCAGTTATGCTGTTAATAGCTATTTTCAAAGAAAGGGTCAGGTTCAAGGGAGTTGTGATTTTTCAGGCACTGCCTCGCCTAGCCAATCTCCTCCTGGTATTAGATTTTTATTTTCCATTTTTACTCATCTTCTTCATCAATTGGTTCTTTTTTTTGTTACTTACCATTTCTTTTGGGTCTTTTCTTGTTTTTCTTGTGTTTTTTCTTTTACAGCCGTAGCTTCTGGGTGTGTTTATCCTTCCAGTCCCAGGTACCCATTTCAATTTCTTCACTCTGATCTTTCAGTTTTTGAAGAATTGATCTCACATTCAACTTTTTAGATTGTGTTTTTCTGTTCAACAATGTTCAAAATGGAAAGTGGGCTTGAGTTGAATATTTTGTTTAATAAGAAACAAAGACTACCTGAGAATCAATGTTTTGGATGAGTTGAAATTTGAAAAGGTTTAAGGAAAAGTAAAGCACTGGTCTCTTAAACAATCCTCAAATATCTCCATTTTTTTTTTCTGAGAATTTGTTTCTCAAAGTGGCATATTCCAATTACTTTTTTTAACCCAAAGTTGTCTTTCTTTTTTTTTTTTTTTTTTAACTTTTCGAGTTGGTGTTGGTGAGAATCTTCTGCTTGATGTAAGAAAAGAAAAGAAAGTAAAAAAAAAAAAAATCTATCAAGAATCCAATTCCCTTCCCCTTCTTTCTCAATGATCAAGCTTGGCTTTATTGAATATCTTTTCCCCTTGGAAAGTTACAATTGTTGAAAATGTTTTTGTAATATATTACTTTGGATGAAAATTATCTTATGGGTAGAATCTGTTAACAAATTAACTTTTAGTTTTGCAGTCTCCCTCTCACAGTTTCTAAACTGTAGATATGATCTATTAATATCATTGATAATGTCTAAAACCGCTTCTTCTAACTGTTGCAACTTGCTAGACTAAGAATACAAGCTGTCTGATGTTGATATGGTTTTTCTTTGTCATCTCTGTCCTCTTCTTTCTCCAAGATAATAGCTCTATTGTTACACACTTGTCTTGTGTTCAAACCCCTACAATGATATTTTCACTTGTTGAGCCTTCTACAAATCACTAAGCTCAACACGTGAGAGAGGTGTTGAAAGTGTTGATATAATATTAAATTTATTGTCACCAGTTAACTTAAGCTTTCATGTCAATCGATAATTTTCAAACACTCATTTCCTTTTTCCTTTCCCTTTCTTTTCAGTTTCACAGGTACCCCGACTAGCACCACCCCATCAACCACTCCATCAACCACCATTCCCGGCACGACACCAGGAACCACAACAAACCCATCAACAACACCACCGTCGACAACAACTCCTGGCACAACCTCCCCTTCAGTGTTCGGAAATGGGATAAGCCCAACAGGCGGTGTCGGTCTGGGCGGGAACAGTATGGATGGCAGTGCTGCTGCAGGTCTCAATGCAGCAGCCTCTAACTTGTTCTTCTTCACAGCTACTGTGACATTTTGGTTGTCAATGTTCTGTTAGGTTAACCATGATGGAGGCCATTAGTTGATTTGTTTGGATGAATGGATGGATGGAAGGAAAAGCTAGGAAGGTTGTTTTCTAATGTCCTTTGCTGTGGAAAGGAAAAAAGAAAAAGAAAAGAAGAAGAAAAGGGTGGAGAATTTGATTCCTTATTGAGTGGTGGTATGATTTTCTACTAGAATGGAACCTGATCCTCTTAGATATTTTTCACTTTTGTGTATCTAATAGAGGCTGTATTTTCCTTAATTTAATGGGACTTTGTACCCACTAATCAATAATTCTGCTCTTTTGTTCATTATTAATTTCTTCATTTAATAATAAAGTCGTATGAGTTGTGTTACTCAATATGCTCTAAGTAAGTAGTTTATGGGAATTTGATTATGGTAAATA TTCAATCATTACCCAAAACATATATCATAATAATAATAGCAATAACTTTCTCAAATCTCATACCCATGAATTGAAATCCTAAAATTTTTGGCTTCAGAGTCCAAAGTAAGCAAATTTTTATACTCTTTAACCCAAAATAGTTCATTGTTGAAACAAATAATGTTTTAACTTTTGGAAGTATAAAATTATCTAGAAATATCATAACTGAAAAAGTAGGATAGAAGAGAGAAAAAAAAAGGTGAATAGAGACACACTGGCACCGCCCTCTACATTCTCTTCCTCACTAGAAATCTCCATTGTCCCATAATTCTCTTTTTCTTTCTCTCTCTTTTTTCCGGTTTTGCCACTTCTCTTAAATCCACAATTCTTCTCTTCTCTCATCTGTACTCTCTCAGAATCTTTCCTCAACCATGGCGGTTCTCTTGCTCTGTTATCTGATATTCTTGGCCTTCACTTCCCATTCAAGTGCTACTTATTGCATTTGTAAAGATGGACTGAGTGATCAAGCCCTTCAGAAAAGTTTGGATTATGCTTGTGGAGCTGGAGCTGATTGTACACCAATCCTTCAAAATGGCCCTTGTTATCAACCCAATACTGTGAAAGATCATTGCAGTTATGCTGTTAATAGCTATTTTCAAAGAAAGGGTCAGGTTCAAGGGAGTTGTGATTTTTCAGGCACTGCCTCGCCTAGCCAATCTCCTCCTGCCGTAGCTTCTGGGTGTGTTTATCCTTCCAGTCCCAGTTTCACAGGTACCCCGACTAGCACCACCCCATCAACCACTCCATCAACCACCATTCCCGGCACGACACCAGGAACCACAACAAACCCATCAACAACACCACCGTCGACAACAACTCCTGGCACAACCTCCCCTTCAGTGTTCGGAAATGGGATAAGCCCAACAGGCGGTGTCGGTCTGGGCGGGAACAGTATGGATGGCAGTGCTGCTGCAGGTCTCAATGCAGCAGCCTCTAACTTGTTCTTCTTCACAGCTACTGTGACATTTTGGTTGTCAATGTTCTGTTAGGTTAACCATGATGGAGGCCATTAGTTGATTTGTTTGGATGAATGGATGGATGGAAGGAAAAGCTAGGAAGGTTGTTTTCTAATGTCCTTTGCTGTGGAAAGGAAAAAAGAAAAAGAAAAGAAGAAGAAAAGGGTGGAGAATTTGATTCCTTATTGAGTGGTGGTATGATTTTCTACTAGAATGGAACCTGATCCTCTTAGATATTTTTCACTTTTGTGTATCTAATAGAGGCTGTATTTTCCTTAATTTAATGGGACTTTGTACCCACTAATCAATAATTCTGCTCTTTTGTTCATTATTAATTTCTTCATTTAATAATAAAGTCGTATGAGTTGTGTTACTCAATATGCTCTAAGTAAGTAGTTTATGGGAATTTGATTATGGTAAATA ATGGCGGTTCTCTTGCTCTGTTATCTGATATTCTTGGCCTTCACTTCCCATTCAAGTGCTACTTATTGCATTTGTAAAGATGGACTGAGTGATCAAGCCCTTCAGAAAAGTTTGGATTATGCTTGTGGAGCTGGAGCTGATTGTACACCAATCCTTCAAAATGGCCCTTGTTATCAACCCAATACTGTGAAAGATCATTGCAGTTATGCTGTTAATAGCTATTTTCAAAGAAAGGGTCAGGTTCAAGGGAGTTGTGATTTTTCAGGCACTGCCTCGCCTAGCCAATCTCCTCCTGCCGTAGCTTCTGGGTGTGTTTATCCTTCCAGTCCCAGTTTCACAGGTACCCCGACTAGCACCACCCCATCAACCACTCCATCAACCACCATTCCCGGCACGACACCAGGAACCACAACAAACCCATCAACAACACCACCGTCGACAACAACTCCTGGCACAACCTCCCCTTCAGTGTTCGGAAATGGGATAAGCCCAACAGGCGGTGTCGGTCTGGGCGGGAACAGTATGGATGGCAGTGCTGCTGCAGGTCTCAATGCAGCAGCCTCTAACTTGTTCTTCTTCACAGCTACTGTGACATTTTGGTTGTCAATGTTCTGTTAG MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCTPILQNGPCYQPNTVKDHCSYAVNSYFQRKGQVQGSCDFSGTASPSQSPPAVASGCVYPSSPSFTGTPTSTTPSTTPSTTIPGTTPGTTTNPSTTPPSTTTPGTTSPSVFGNGISPTGGVGLGGNSMDGSAAAGLNAAASNLFFFTATVTFWLSMFC* Homology
BLAST of CSPI06G19640 vs. ExPASy Swiss-Prot
Match: Q9FZ86 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana OX=3702 GN=PDCB3 PE=1 SV=1) HSP 1 Score: 144.4 bits (363), Expect = 1.4e-33 Identity = 92/164 (56.10%), Postives = 113/164 (68.90%), Query Frame = 0
BLAST of CSPI06G19640 vs. ExPASy Swiss-Prot
Match: Q9FNQ2 (PLASMODESMATA CALLOSE-BINDING PROTEIN 1 OS=Arabidopsis thaliana OX=3702 GN=PDCB1 PE=1 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 4.2e-30 Identity = 88/184 (47.83%), Postives = 117/184 (63.59%), Query Frame = 0
BLAST of CSPI06G19640 vs. ExPASy Swiss-Prot
Match: Q93V72 (PLASMODESMATA CALLOSE-BINDING PROTEIN 4 OS=Arabidopsis thaliana OX=3702 GN=PDCB4 PE=1 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 1.3e-28 Identity = 105/226 (46.46%), Postives = 134/226 (59.29%), Query Frame = 0
BLAST of CSPI06G19640 vs. ExPASy Swiss-Prot
Match: Q9SD84 (PLASMODESMATA CALLOSE-BINDING PROTEIN 2 OS=Arabidopsis thaliana OX=3702 GN=PDCB2 PE=1 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 1.2e-24 Identity = 74/166 (44.58%), Postives = 102/166 (61.45%), Query Frame = 0
BLAST of CSPI06G19640 vs. ExPASy Swiss-Prot
Match: Q9FZD0 (Carbohydrate-binding X8 domain-containing protein OS=Arabidopsis thaliana OX=3702 GN=At1g26450 PE=2 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 1.2e-21 Identity = 82/181 (45.30%), Postives = 106/181 (58.56%), Query Frame = 0
BLAST of CSPI06G19640 vs. ExPASy TrEMBL
Match: A0A0A0KDN8 (X8 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G366460 PE=4 SV=1) HSP 1 Score: 387.5 bits (994), Expect = 3.5e-104 Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 0
BLAST of CSPI06G19640 vs. ExPASy TrEMBL
Match: A0A5A7V8S9 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00670 PE=4 SV=1) HSP 1 Score: 373.2 bits (957), Expect = 6.8e-100 Identity = 197/205 (96.10%), Postives = 201/205 (98.05%), Query Frame = 0
BLAST of CSPI06G19640 vs. ExPASy TrEMBL
Match: A0A1S3BDH0 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Cucumis melo OX=3656 GN=LOC103488471 PE=4 SV=1) HSP 1 Score: 373.2 bits (957), Expect = 6.8e-100 Identity = 197/205 (96.10%), Postives = 201/205 (98.05%), Query Frame = 0
BLAST of CSPI06G19640 vs. ExPASy TrEMBL
Match: A0A6J1BPT8 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Momordica charantia OX=3673 GN=LOC111004672 PE=4 SV=1) HSP 1 Score: 335.5 bits (859), Expect = 1.6e-88 Identity = 176/204 (86.27%), Postives = 189/204 (92.65%), Query Frame = 0
BLAST of CSPI06G19640 vs. ExPASy TrEMBL
Match: A0A6J1HDW5 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Cucurbita moschata OX=3662 GN=LOC111462671 PE=4 SV=1) HSP 1 Score: 303.9 bits (777), Expect = 5.1e-79 Identity = 171/207 (82.61%), Postives = 179/207 (86.47%), Query Frame = 0
BLAST of CSPI06G19640 vs. NCBI nr
Match: XP_004144176.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Cucumis sativus] >XP_031742380.1 PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Cucumis sativus] >KAE8647252.1 hypothetical protein Csa_018278 [Cucumis sativus] >KGN47648.1 hypothetical protein Csa_018913 [Cucumis sativus]) HSP 1 Score: 387.5 bits (994), Expect = 7.2e-104 Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 0
BLAST of CSPI06G19640 vs. NCBI nr
Match: XP_008445454.1 (PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Cucumis melo] >KAA0064762.1 PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Cucumis melo var. makuwa]) HSP 1 Score: 373.2 bits (957), Expect = 1.4e-99 Identity = 197/205 (96.10%), Postives = 201/205 (98.05%), Query Frame = 0
BLAST of CSPI06G19640 vs. NCBI nr
Match: XP_038886488.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Benincasa hispida]) HSP 1 Score: 362.1 bits (928), Expect = 3.2e-96 Identity = 194/205 (94.63%), Postives = 197/205 (96.10%), Query Frame = 0
BLAST of CSPI06G19640 vs. NCBI nr
Match: XP_022131475.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Momordica charantia]) HSP 1 Score: 335.5 bits (859), Expect = 3.2e-88 Identity = 176/204 (86.27%), Postives = 189/204 (92.65%), Query Frame = 0
BLAST of CSPI06G19640 vs. NCBI nr
Match: XP_023546942.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 307.4 bits (786), Expect = 9.5e-80 Identity = 173/207 (83.57%), Postives = 180/207 (86.96%), Query Frame = 0
BLAST of CSPI06G19640 vs. TAIR 10
Match: AT1G13830.1 (Carbohydrate-binding X8 domain superfamily protein ) HSP 1 Score: 147.5 bits (371), Expect = 1.2e-35 Identity = 100/200 (50.00%), Postives = 124/200 (62.00%), Query Frame = 0
BLAST of CSPI06G19640 vs. TAIR 10
Match: AT1G18650.1 (plasmodesmata callose-binding protein 3 ) HSP 1 Score: 144.4 bits (363), Expect = 9.9e-35 Identity = 92/164 (56.10%), Postives = 113/164 (68.90%), Query Frame = 0
BLAST of CSPI06G19640 vs. TAIR 10
Match: AT2G03505.1 (Carbohydrate-binding X8 domain superfamily protein ) HSP 1 Score: 138.7 bits (348), Expect = 5.4e-33 Identity = 86/163 (52.76%), Postives = 108/163 (66.26%), Query Frame = 0
BLAST of CSPI06G19640 vs. TAIR 10
Match: AT5G61130.1 (plasmodesmata callose-binding protein 1 ) HSP 1 Score: 132.9 bits (333), Expect = 3.0e-31 Identity = 88/184 (47.83%), Postives = 117/184 (63.59%), Query Frame = 0
BLAST of CSPI06G19640 vs. TAIR 10
Match: AT1G69295.1 (plasmodesmata callose-binding protein 4 ) HSP 1 Score: 127.9 bits (320), Expect = 9.6e-30 Identity = 105/226 (46.46%), Postives = 134/226 (59.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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