CSPI06G19380 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAAGTTCTATGGCATTGACTGGTATGTTCTTCTTTTCTCTTAACTATGACGCCGTGAATAGATGCTCATTTCTTCCGATTTCACCAGCAATAAATTTAAGCTTTGTGCTGCACAATGTGTAGGTATTTTGACAATGCATAGAGGAAGAGATAGCCCTATAAAGTTGCAGAACATCACTCATACAGCAACATCTAGTAAACATAAACGTGAATTTGGTATGGACTTTGAATCAGACTGGACAAGACACGTTAAGTCTTCTGCATTTGCTGCTCCAGTGATCCGTTCTGCAACTTCGTTTATGCGTTGGTCTTGCAGAATCCCAATTAGTGAAGGATATCATGAATTTCTTTAA ATGGCAAGTTCTATGGCATTGACTGGTATTTTGACAATGCATAGAGGAAGAGATAGCCCTATAAAGTTGCAGAACATCACTCATACAGCAACATCTAGTAAACATAAACGTGAATTTGGTATGGACTTTGAATCAGACTGGACAAGACACGTTAAGTCTTCTGCATTTGCTGCTCCAGTGATCCGTTCTGCAACTTCGTTTATGCGTTGGTCTTGCAGAATCCCAATTAGTGAAGGATATCATGAATTTCTTTAA ATGGCAAGTTCTATGGCATTGACTGGTATTTTGACAATGCATAGAGGAAGAGATAGCCCTATAAAGTTGCAGAACATCACTCATACAGCAACATCTAGTAAACATAAACGTGAATTTGGTATGGACTTTGAATCAGACTGGACAAGACACGTTAAGTCTTCTGCATTTGCTGCTCCAGTGATCCGTTCTGCAACTTCGTTTATGCGTTGGTCTTGCAGAATCCCAATTAGTGAAGGATATCATGAATTTCTTTAA MASSMALTGILTMHRGRDSPIKLQNITHTATSSKHKREFGMDFESDWTRHVKSSAFAAPVIRSATSFMRWSCRIPISEGYHEFL* Homology
BLAST of CSPI06G19380 vs. ExPASy TrEMBL
Match: A0A0A0KD56 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G365200 PE=4 SV=1) HSP 1 Score: 173.3 bits (438), Expect = 4.3e-40 Identity = 83/84 (98.81%), Postives = 84/84 (100.00%), Query Frame = 0
BLAST of CSPI06G19380 vs. ExPASy TrEMBL
Match: A0A5A7VCL2 (F-box/kelch-repeat protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00410 PE=4 SV=1) HSP 1 Score: 149.1 bits (375), Expect = 8.6e-33 Identity = 71/76 (93.42%), Postives = 72/76 (94.74%), Query Frame = 0
BLAST of CSPI06G19380 vs. ExPASy TrEMBL
Match: A0A5J5ASN4 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_033169 PE=4 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 3.0e-17 Identity = 54/88 (61.36%), Postives = 63/88 (71.59%), Query Frame = 0
BLAST of CSPI06G19380 vs. ExPASy TrEMBL
Match: A0A5J5AWB6 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_033166 PE=4 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 1.5e-16 Identity = 53/88 (60.23%), Postives = 62/88 (70.45%), Query Frame = 0
BLAST of CSPI06G19380 vs. ExPASy TrEMBL
Match: A0A444WZZ5 (Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B03g066056 PE=4 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 7.6e-13 Identity = 46/87 (52.87%), Postives = 56/87 (64.37%), Query Frame = 0
BLAST of CSPI06G19380 vs. NCBI nr
Match: KAE8647234.1 (hypothetical protein Csa_019002, partial [Cucumis sativus]) HSP 1 Score: 173.3 bits (438), Expect = 8.8e-40 Identity = 83/84 (98.81%), Postives = 84/84 (100.00%), Query Frame = 0
BLAST of CSPI06G19380 vs. NCBI nr
Match: KAA0064737.1 (F-box/kelch-repeat protein [Cucumis melo var. makuwa]) HSP 1 Score: 149.1 bits (375), Expect = 1.8e-32 Identity = 71/76 (93.42%), Postives = 72/76 (94.74%), Query Frame = 0
BLAST of CSPI06G19380 vs. NCBI nr
Match: KAG7020136.1 (hypothetical protein SDJN02_16818 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 138.3 bits (347), Expect = 3.1e-29 Identity = 70/85 (82.35%), Postives = 75/85 (88.24%), Query Frame = 0
BLAST of CSPI06G19380 vs. NCBI nr
Match: KAG6585216.1 (hypothetical protein SDJN03_17949, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 138.3 bits (347), Expect = 3.1e-29 Identity = 70/85 (82.35%), Postives = 75/85 (88.24%), Query Frame = 0
BLAST of CSPI06G19380 vs. NCBI nr
Match: KAG2702702.1 (hypothetical protein I3760_06G102300 [Carya illinoinensis] >KAG6651297.1 hypothetical protein CIPAW_06G101300 [Carya illinoinensis] >KAG6708844.1 hypothetical protein I3842_06G101800 [Carya illinoinensis] >KAG7975383.1 hypothetical protein I3843_06G095400 [Carya illinoinensis]) HSP 1 Score: 98.6 bits (244), Expect = 2.8e-17 Identity = 51/82 (62.20%), Postives = 59/82 (71.95%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
|