CSPI06G18810 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI06G18810
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr6: 17050193 .. 17050431 (-)
RNA-Seq ExpressionCSPI06G18810
SyntenyCSPI06G18810
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACCACTCGCTGACAGGTTGTGAGTTTACTCGACGTGGCGGGGAATGTGAGCGAGTGGGGGAGATATGGGTAGTCGCGGACTGTAGTCAAAAGAAGAAAGTAAGAGAGGGTGTACGAAGGTTCTGGATGGACCAATGAGAGAGTGCAACGTGGAGGAAGATGATAGAAGTGGAGCCGGTGGTGTCGGTATTGATTGGATGAAAACGTTGAAGGTCGGCAAGAGTGGGGCCCAATGA

mRNA sequence

ATGGACCACTCGCTGACAGGTTGTGAGTTTACTCGACGTGGCGGGGAATGTGAGCGAGTGGGGGAGATATGGGTTCTGGATGGACCAATGAGAGAGTGCAACGTGGAGGAAGATGATAGAAGTGGAGCCGGTGGTGTCGGTATTGATTGGATGAAAACGTTGAAGGTCGGCAAGAGTGGGGCCCAATGA

Coding sequence (CDS)

ATGGACCACTCGCTGACAGGTTGTGAGTTTACTCGACGTGGCGGGGAATGTGAGCGAGTGGGGGAGATATGGGTTCTGGATGGACCAATGAGAGAGTGCAACGTGGAGGAAGATGATAGAAGTGGAGCCGGTGGTGTCGGTATTGATTGGATGAAAACGTTGAAGGTCGGCAAGAGTGGGGCCCAATGA

Protein sequence

MDHSLTGCEFTRRGGECERVGEIWVLDGPMRECNVEEDDRSGAGGVGIDWMKTLKVGKSGAQ*
Homology
[Close]
BLAST of CSPI06G18810 vs. ExPASy TrEMBL
Match: A0A0A0KGR8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G358700 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 2.4e-19
Identity = 50/62 (80.65%), Postives = 50/62 (80.65%), Query Frame = 0 

Query: 1  MDHSLTGCEFTRRGGECERVGEIWVLDGPMRECNVEEDDRSGAGGVGIDWMKTLKVGKSG 60
          MDHSLTGCEFTRRGGECERVGEIW            EDDRSGAGGVGIDWMKTLKVGKSG
Sbjct: 1  MDHSLTGCEFTRRGGECERVGEIW------------EDDRSGAGGVGIDWMKTLKVGKSG 50

Query: 61 AQ 63
          AQ
Sbjct: 61 AQ 50

[Close]
BLAST of CSPI06G18810 vs. NCBI nr
Match: KGN47557.1 (hypothetical protein Csa_018967 [Cucumis sativus])

HSP 1 Score: 104.0 bits (258), Expect = 4.9e-19
Identity = 50/62 (80.65%), Postives = 50/62 (80.65%), Query Frame = 0 

Query: 1  MDHSLTGCEFTRRGGECERVGEIWVLDGPMRECNVEEDDRSGAGGVGIDWMKTLKVGKSG 60
          MDHSLTGCEFTRRGGECERVGEIW            EDDRSGAGGVGIDWMKTLKVGKSG
Sbjct: 1  MDHSLTGCEFTRRGGECERVGEIW------------EDDRSGAGGVGIDWMKTLKVGKSG 50

Query: 61 AQ 63
          AQ
Sbjct: 61 AQ 50

The following BLAST results are available for this feature:
BLAST of CSPI06G18810 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI06G18810 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KGR82.4e-1980.65Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G358700 PE=4 SV=1[more]
BLAST of CSPI06G18810 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN47557.14.9e-1980.65hypothetical protein Csa_018967 [Cucumis sativus][more]
BLAST of CSPI06G18810 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI06G18810.1CSPI06G18810.1mRNA