CSPI06G18250 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI06G18250
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr6: 16589540 .. 16590524 (-)
RNA-Seq ExpressionCSPI06G18250
SyntenyCSPI06G18250
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAACTGATTAACTATGCATTTATCCGACCACCAGATTAGTTGGATGTATATTGAAACATGTCATGGATTCAGAGACTAAATCCTGGAATGGATTACAAGAGCAGATCGGCATCAGGCAGGACGGATGCTTTCTATGTCAGGAATCCTGCCAAAATATGGTGGATTTGAATACAATGAAAGCATTTTGCAAGAGCGTAAGACATACAACAAAGCTCGATGTCATTGAGAAGAAGACTGAAGAATGGCAACAATGGCTTTCTTCTTCGTTCTTCGCTGACTCGGTGAAAGGTTTCTTCTTGCTTAAAACTAAGTTGATCCTATGACTATGGCATAACCTTTGAATCTTACAAAATAAAAATACAGTCTGTCCTTGAAAGATAATGGGCAGGAGTTGCTCAGACTCAGGTAATGTTTCTCAAACGTAAGCACAAGCTTTTCTTCGCTGTCTAGAAAAAGGTTTTAGTTTCTTCATATCAACATTACTGCATTTGTGTAATATACTGGCCACATGAAATGAGAGCTGGCTTCACATTGTTTTAATTGACAGCACTTGCAACTCAAGTTTTCTTATGATTTTTTCTCTGTTGGTGCTAATTTCAGGATCCCAAGGATGGATTAAGTCTGAATAGAGCAATAACAAATCAACCGGCTGATCGTAATTTGAGGAATGTCCAACGTTTACAGGTAAACTGAATTGTTTATTTTGCAAGAAAGGACAGTAGCATGCAAATTGAATTATTGACTCACCTCCCCAATTTCTAGTTCTCTATAATGAGTAATGGATTTACGTGTAAAATTGAAACATATCGGATTAGAATGTTTACCTAAATACAAACAAACACACATCAGTAAAGTGACTGGCCCAGTCAGATCTCTGAGGTTTAATAATCTACACGCCGTCCCAAACTATACAACCATAAAAAATTAAGAATTAAAAAATAAAAAAACTAACTTGGCCAATTTCAGCGGAGGATAGAATACTTGA

mRNA sequence

CAACTGATTAACTATGCATTTATCCGACCACCAGATTAGTTGGATGTATATTGAAACATGTCATGGATTCAGAGACTAAATCCTGGAATGGATTACAAGAGCAGATCGGCATCAGGCAGGACGGATGCTTTCTATGTCAGGAATCCTGCCAAAATATGGTGGATTTGAATACAATGAAAGCATTTTGCAAGAGCGTAAGACATACAACAAAGCTCGATGTCATTGAGAAGAAGACTGAAGAATGGCAACAATGGCTTTCTTCTTCGTTCTTCGCTGACTCGGTGAAAGGTTTCTTCTTGCTTAAAACTAAGTTGATCCTATGACTATGGCATAACCTTTGAATCTTACAAAATAAAAATACAGTCTGTCCTTGAAAGATAATGGGCAGGAGTTGCTCAGACTCAGGTAATGTTTCTCAAACGTAAGCACAAGCTTTTCTTCGCTGTCTAGAAAAAGGTTTTAGTTTCTTCATATCAACATTACTGCATTTGTGTAATATACTGGCCACATGAAATGAGAGCTGGCTTCACATTGTTTTAATTGACAGCACTTGCAACTCAAGTTTTCTTATGATTTTTTCTCTGTTGGTGCTAATTTCAGGATCCCAAGGATGGATTAAGTCTGAATAGAGCAATAACAAATCAACCGGCTGATCGTAATTTGAGGAATGTCCAACGTTTACAGGTAAACTGAATTGTTTATTTTGCAAGAAAGGACAGTAGCATGCAAATTGAATTATTGACTCACCTCCCCAATTTCTAGTTCTCTATAATGAGTAATGGATTTACGTGTAAAATTGAAACATATCGGATTAGAATGTTTACCTAAATACAAACAAACACACATCAGTAAAGTGACTGGCCCAGTCAGATCTCTGAGGTTTAATAATCTACACGCCGTCCCAAACTATACAACCATAAAAAATTAAGAATTAAAAAATAAAAAAACTAACTTGGCCAATTTCAGCGGAGGATAGAATACTTGA

Coding sequence (CDS)

ATGGATTCAGAGACTAAATCCTGGAATGGATTACAAGAGCAGATCGGCATCAGGCAGGACGGATGCTTTCTATGTCAGGAATCCTGCCAAAATATGGTGGATTTGAATACAATGAAAGCATTTTGCAAGAGCGTAAGACATACAACAAAGCTCGATGTCATTGAGAAGAAGACTGAAGAATGGCAACAATGGCTTTCTTCTTCGTTCTTCGCTGACTCGGTGAAAGGTTTCTTCTTGCTTAAAACTAAGTTGATCCTATGA

Protein sequence

MDSETKSWNGLQEQIGIRQDGCFLCQESCQNMVDLNTMKAFCKSVRHTTKLDVIEKKTEEWQQWLSSSFFADSVKGFFLLKTKLIL*
Homology
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BLAST of CSPI06G18250 vs. ExPASy TrEMBL
Match: A0A0A0KCV9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G344290 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 3.2e-35
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 1  MDSETKSWNGLQEQIGIRQDGCFLCQESCQNMVDLNTMKAFCKSVRHTTKLDVIEKKTEE 60
          MDSETKSWNGLQEQIGIRQDGCFLCQESCQNMVDLNTMKAFCKSVRHTTKLDVIEKKTEE
Sbjct: 1  MDSETKSWNGLQEQIGIRQDGCFLCQESCQNMVDLNTMKAFCKSVRHTTKLDVIEKKTEE 60

Query: 61 WQQWLSSSFFADS 74
          WQQWLSSSFFADS
Sbjct: 61 WQQWLSSSFFADS 73

The following BLAST results are available for this feature:
BLAST of CSPI06G18250 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI06G18250 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KCV93.2e-35100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G344290 PE=4 SV=1[more]
BLAST of CSPI06G18250 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
BLAST of CSPI06G18250 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI06G18250.1CSPI06G18250.1mRNA
CSPI06G18250.2CSPI06G18250.2mRNA