CSPI06G16520 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI06G16520
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	chitinase 2-like
Location	Chr6: 14953617 .. 14954673 (-)
RNA-Seq Expression	CSPI06G16520
Synteny	CSPI06G16520

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAACAAATTGGCTGCCTAGTTGCCGTCTCATTGCTGGTGAGGAATCTCATGATTCTCCTGGCCTTTATGTGCAAATTCACCTAATAAATGCATCGATGTTTTAGAAATGGAAGAAGTATCATTAAGCTTCAACCAATCATCATGGGTTCAAGTATATTCTTCCTATTTTCATTTCTAGGATTCCTATTTGCCATACTTTCATTAGTAAAGGCAGAGCCCTTAAAGAACACAAGACTATTCAGAGAATACATAGGAGCTGAAGACAAAAATGTTAGATTTTCAGACGTGCCTATTCATTCTGATGTTGAATTCCACTTCATTCTCTCCTTCGCTATCGATTACACAGGTTCATCTTCTCCAACAAATGGCAAGTTCAATGTCTTTTGGGATGAAGAAAACCTCACACCTTCTTCTATTTCTTCCATCAAGGCCAAGCATTCAAATGTCAAGTTCGCCCTCAGCCTCGGAGGTGATACGGTAAGTGATGGAACATTTGCATTCTTCAAACCCAAATCCATTACATCTTGGGTTAACAATGCTTTTACGTCCATATCTCATATAGTGAAGGAGTATGATCTAGATGGGGTAGACATCGATTATGAACACTTCAAAGCATCCCCTAATACATTTACCGAGTGTATAGGGCAACTCCTACAACGACTCAAACGTCAAAATATCATTTCGTTTGCATCCATTGCACCATTTGATGACGACACTGTGCAGTCACATTACATGGCTTTGTGGAGAAAGTATGGAGATCTAATAGACTATGTCAACTTCCAGTTCTATTCCTATGGAAAAGGGACAACAGTTTCTCAGTTTTTGAATCATTTCGATGCCCAAAGCTCTAATTACGAAGGTGGGAAAGTTCTAGCAAGCTTTGCAACAGATGGAAGTGGAGGTTTGACACCAGAAAAAGGGTTCTTCAAGGCATGCACCACCCTTCAAAGTAGGGGCAAACTTCATGGCATATTTGTTTGGTCAGCAGACGATTCGAAGAAGAACAATTTTCGTAATGAGATACAAGCACAAAACCTTTTAGCCAATGTGGAATGA

mRNA sequence

CAAACAAATTGGCTGCCTAGTTGCCGTCTCATTGCTGGTGAGGAATCTCATGATTCTCCTGGCCTTTATGTGCAAATTCACCTAATAAATGCATCGATGTTTTAGAAATGGAAGAAGTATCATTAAGCTTCAACCAATCATCATGGGTTCAAGTATATTCTTCCTATTTTCATTTCTAGGATTCCTATTTGCCATACTTTCATTAGTAAAGGCAGAGCCCTTAAAGAACACAAGACTATTCAGAGAATACATAGGAGCTGAAGACAAAAATGTTAGATTTTCAGACGTGCCTATTCATTCTGATGTTGAATTCCACTTCATTCTCTCCTTCGCTATCGATTACACAGGTTCATCTTCTCCAACAAATGGCAAGTTCAATGTCTTTTGGGATGAAGAAAACCTCACACCTTCTTCTATTTCTTCCATCAAGGCCAAGCATTCAAATGTCAAGTTCGCCCTCAGCCTCGGAGGTGATACGGTAAGTGATGGAACATTTGCATTCTTCAAACCCAAATCCATTACATCTTGGGTTAACAATGCTTTTACGTCCATATCTCATATAGTGAAGGAGTATGATCTAGATGGGGTAGACATCGATTATGAACACTTCAAAGCATCCCCTAATACATTTACCGAGTGTATAGGGCAACTCCTACAACGACTCAAACGTCAAAATATCATTTCGTTTGCATCCATTGCACCATTTGATGACGACACTGTGCAGTCACATTACATGGCTTTGTGGAGAAAGTATGGAGATCTAATAGACTATGTCAACTTCCAGTTCTATTCCTATGGAAAAGGGACAACAGTTTCTCAGTTTTTGAATCATTTCGATGCCCAAAGCTCTAATTACGAAGGTGGGAAAGTTCTAGCAAGCTTTGCAACAGATGGAAGTGGAGGTTTGACACCAGAAAAAGGGTTCTTCAAGGCATGCACCACCCTTCAAAGTAGGGGCAAACTTCATGGCATATTTGTTTGGTCAGCAGACGATTCGAAGAAGAACAATTTTCGTAATGAGATACAAGCACAAAACCTTTTAGCCAATGTGGAATGA

Coding sequence (CDS)

ATGCATCGATGTTTTAGAAATGGAAGAAGTATCATTAAGCTTCAACCAATCATCATGGGTTCAAGTATATTCTTCCTATTTTCATTTCTAGGATTCCTATTTGCCATACTTTCATTAGTAAAGGCAGAGCCCTTAAAGAACACAAGACTATTCAGAGAATACATAGGAGCTGAAGACAAAAATGTTAGATTTTCAGACGTGCCTATTCATTCTGATGTTGAATTCCACTTCATTCTCTCCTTCGCTATCGATTACACAGGTTCATCTTCTCCAACAAATGGCAAGTTCAATGTCTTTTGGGATGAAGAAAACCTCACACCTTCTTCTATTTCTTCCATCAAGGCCAAGCATTCAAATGTCAAGTTCGCCCTCAGCCTCGGAGGTGATACGGTAAGTGATGGAACATTTGCATTCTTCAAACCCAAATCCATTACATCTTGGGTTAACAATGCTTTTACGTCCATATCTCATATAGTGAAGGAGTATGATCTAGATGGGGTAGACATCGATTATGAACACTTCAAAGCATCCCCTAATACATTTACCGAGTGTATAGGGCAACTCCTACAACGACTCAAACGTCAAAATATCATTTCGTTTGCATCCATTGCACCATTTGATGACGACACTGTGCAGTCACATTACATGGCTTTGTGGAGAAAGTATGGAGATCTAATAGACTATGTCAACTTCCAGTTCTATTCCTATGGAAAAGGGACAACAGTTTCTCAGTTTTTGAATCATTTCGATGCCCAAAGCTCTAATTACGAAGGTGGGAAAGTTCTAGCAAGCTTTGCAACAGATGGAAGTGGAGGTTTGACACCAGAAAAAGGGTTCTTCAAGGCATGCACCACCCTTCAAAGTAGGGGCAAACTTCATGGCATATTTGTTTGGTCAGCAGACGATTCGAAGAAGAACAATTTTCGTAATGAGATACAAGCACAAAACCTTTTAGCCAATGTGGAATGA

Protein sequence

MHRCFRNGRSIIKLQPIIMGSSIFFLFSFLGFLFAILSLVKAEPLKNTRLFREYIGAEDKNVRFSDVPIHSDVEFHFILSFAIDYTGSSSPTNGKFNVFWDEENLTPSSISSIKAKHSNVKFALSLGGDTVSDGTFAFFKPKSITSWVNNAFTSISHIVKEYDLDGVDIDYEHFKASPNTFTECIGQLLQRLKRQNIISFASIAPFDDDTVQSHYMALWRKYGDLIDYVNFQFYSYGKGTTVSQFLNHFDAQSSNYEGGKVLASFATDGSGGLTPEKGFFKACTTLQSRGKLHGIFVWSADDSKKNNFRNEIQAQNLLANVE*

Homology

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BLAST of CSPI06G16520 vs. ExPASy Swiss-Prot
Match: Q9SLP4 (Chitinase 1 OS=Tulipa saxatilis subsp. bakeri OX=110455 PE=1 SV=1)

HSP 1 Score: 377.5 bits (968), Expect = 1.5e-103
Identity = 184/298 (61.74%), Postives = 229/298 (76.85%), Query Frame = 0


Query: 28  SFLGFLFAILSLVKAEPLKNTRLFREYIGAEDKNVRFSDVPIHSDVEFHFILSFAIDYTG 87
           S L   FA+LS +   PL +  +FREYIG++  +V+FSDVPI+ DV+FHFIL+FAIDYT 
Sbjct: 8   SLLLLFFALLSPLL--PLTSALVFREYIGSQFNDVKFSDVPINPDVDFHFILAFAIDYTS 67

Query: 88  SSS--PTNGKFNVFWDEENLTPSSISSIKAKHSNVKFALSLGGDTVSDGTFAFFKPKSIT 147
            SS  PTNG F  FWD  NL+PS ++++K  HSNVK +LSLGGD+V  G   FF P S++
Sbjct: 68  GSSPTPTNGNFKPFWDTNNLSPSQVAAVKRTHSNVKVSLSLGGDSVG-GKNVFFSPSSVS 127

Query: 148 SWVNNAFTSISHIVKEYDLDGVDIDYEHFKASPNTFTECIGQLLQRLKRQNIISFASIAP 207
           SWV NA +S++ I+K+Y LDG+DIDYEHFK  PNTF ECIGQL+ RLK+  ++SF SIAP
Sbjct: 128 SWVENAVSSLTRIIKQYHLDGIDIDYEHFKGDPNTFAECIGQLVTRLKKNEVVSFVSIAP 187

Query: 208 FDDDTVQSHYMALWRKYGDLIDYVNFQFYSYGKGTTVSQFLNHFDAQSSNYEGGKVLASF 267
           FDD  VQSHY ALW KYG  IDYVNFQFY+Y   T+V QFL +F+ QSSNY GGKVL SF
Sbjct: 188 FDDAQVQSHYQALWEKYGHQIDYVNFQFYAYSARTSVEQFLKYFEEQSSNYHGGKVLVSF 247

Query: 268 ATDGSGGLTPEKGFFKACTTLQSRGKLHGIFVWSADDSKKNN--FRNEIQAQNLLANV 322
           +TD SGGL P+ GFF+AC+ L+ +GKLHGIFVWSADDS  +N  FR E+QAQ++LA+V
Sbjct: 248 STDSSGGLKPDNGFFRACSILKKQGKLHGIFVWSADDSLMSNNVFRYEMQAQSMLASV 302

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BLAST of CSPI06G16520 vs. ExPASy Swiss-Prot
Match: Q7M443 (Chitinase 2 OS=Tulipa saxatilis subsp. bakeri OX=110455 PE=1 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 5.6e-98
Identity = 172/275 (62.55%), Postives = 214/275 (77.82%), Query Frame = 0


Query: 50  LFREYIGAEDKNVRFSDVPIHSDVEFHFILSFAIDYTGSSS--PTNGKFNVFWDEENLTP 109
           LFREYIGA+  +V+FSDVPI+ +V+FHFIL+FAIDYT  SS  PTNG FN FWD  NL+P
Sbjct: 2   LFREYIGAQFNDVKFSDVPINPNVDFHFILAFAIDYTSGSSPTPTNGNFNPFWDTNNLSP 61

Query: 110 SSISSIKAKHSNVKFALSLGGDTVSDGTFAFFKPKSITSWVNNAFTSISHIVKEYDLDGV 169
           S +++IK  ++NVK ++SLGG++V  G   FF P S++SWV+NA +S++ I+K+Y LDG+
Sbjct: 62  SQVAAIKRTYNNVKVSVSLGGNSVG-GERVFFNPSSVSSWVDNAVSSLTKIIKQYHLDGI 121

Query: 170 DIDYEHFKASPNTFTECIGQLLQRLKRQNIISFASIAPFDDDTVQSHYMALWRKYGDLID 229
           DIDYEHFK  PNTF ECIGQL+ RLK+  ++SF SIAPFDD  VQSHY ALW KYG  ID
Sbjct: 122 DIDYEHFKGDPNTFAECIGQLVTRLKKNGVVSFVSIAPFDDAQVQSHYQALWEKYGHQID 181

Query: 230 YVNFQFYSYGKGTTVSQFLNHFDAQSSNYEGGKVLASFATDGSGGLTPEKGFFKACTTLQ 289
           YVNFQFY Y    +V QFL +F+ Q SNY GGKVL SF+TD SGGL P  GFF AC+ L+
Sbjct: 182 YVNFQFYVYSSRMSVEQFLKYFEMQRSNYPGGKVLVSFSTDNSGGLKPRNGFFDACSILK 241

Query: 290 SRGKLHGIFVWSADDSKKNN--FRNEIQAQNLLAN 321
            +GKLHGIFVWSADDS  +N  F+ E+QAQ+LLA+
Sbjct: 242 KQGKLHGIFVWSADDSLMSNDVFKYEMQAQSLLAS 275

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BLAST of CSPI06G16520 vs. ExPASy Swiss-Prot
Match: P39657 (RuBisCO-associated protein OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 6.2e-20
Identity = 62/187 (33.16%), Postives = 92/187 (49.20%), Query Frame = 0


Query: 49  RLFREYIGAEDKNVRFSDVPIHSDVEFHFILSFAIDYTGSSSPTNGKFNVFWDEENLTPS 108
           ++FRE+    D +     +P  +  EF   LS A DY G++S TNGKF  +WD E +TP 
Sbjct: 6   KVFREF--TSDDSFLNQVIP-ENITEFQVTLSLARDYDGNNS-TNGKFIPYWDTEKVTPE 65

Query: 109 SISSIKAKHS----NVKFALSLGGDTVSDGTFAFFKPKSITSWVNNAFTSISHIVKEYDL 168
            I   K K+      VK  +S+G        F      +  +WV+ A  S+  I+K Y+L
Sbjct: 66  VIKKFKKKYEPTALRVKVLVSIGNKN-KQFPFTIGSDSNSEAWVSEATASLKSIIKTYNL 125

Query: 169 DGVDIDYEHFKASPNTFTECIGQLLQRLKRQNIISFASIAPFDDDTVQSHYMALWRKYGD 228
           DG+D+ YE   A+   F   +G L++ LK+  +I+ AS A   D      Y  L+ +Y  
Sbjct: 126 DGIDVSYEDIAANEADFVNSVGGLVRNLKQNKLITVASFATSADAANNKFYNLLYAEYAT 185

Query: 229 LIDYVNF 232
             D V F
Sbjct: 186 FFDTVVF 187

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BLAST of CSPI06G16520 vs. ExPASy TrEMBL
Match: A0A0A0KES2 (Glyco_hydro_18 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G301040 PE=3 SV=1)

HSP 1 Score: 614.0 bits (1582), Expect = 3.6e-172
Identity = 303/304 (99.67%), Postives = 304/304 (100.00%), Query Frame = 0


Query: 19  MGSSIFFLFSFLGFLFAILSLVKAEPLKNTRLFREYIGAEDKNVRFSDVPIHSDVEFHFI 78
           MGSSIFFLFSFLGFLFAILSLVKAEPLKNTRLFREYIGAEDKNVRFSDVPIHSDVEFHFI
Sbjct: 1   MGSSIFFLFSFLGFLFAILSLVKAEPLKNTRLFREYIGAEDKNVRFSDVPIHSDVEFHFI 60

Query: 79  LSFAIDYTGSSSPTNGKFNVFWDEENLTPSSISSIKAKHSNVKFALSLGGDTVSDGTFAF 138
           LSFAIDYTGSSSPTNGKFNVFWDEENLTPSSISSIKAKHSNVKFALSLGGDTVSDGTFAF
Sbjct: 61  LSFAIDYTGSSSPTNGKFNVFWDEENLTPSSISSIKAKHSNVKFALSLGGDTVSDGTFAF 120

Query: 139 FKPKSITSWVNNAFTSISHIVKEYDLDGVDIDYEHFKASPNTFTECIGQLLQRLKRQNII 198
           FKPKSITSWVNNAFTSISHIVKEYDLDGVDIDYEHFKASPNTFTECIGQLLQRLKRQNII
Sbjct: 121 FKPKSITSWVNNAFTSISHIVKEYDLDGVDIDYEHFKASPNTFTECIGQLLQRLKRQNII 180

Query: 199 SFASIAPFDDDTVQSHYMALWRKYGDLIDYVNFQFYSYGKGTTVSQFLNHFDAQSSNYEG 258
           SFASIAPFDDDTVQSHYMALWRKYGDLIDYVNFQFYSYG+GTTVSQFLNHFDAQSSNYEG
Sbjct: 181 SFASIAPFDDDTVQSHYMALWRKYGDLIDYVNFQFYSYGEGTTVSQFLNHFDAQSSNYEG 240

Query: 259 GKVLASFATDGSGGLTPEKGFFKACTTLQSRGKLHGIFVWSADDSKKNNFRNEIQAQNLL 318
           GKVLASFATDGSGGLTPEKGFFKACTTLQSRGKLHGIFVWSADDSKKNNFRNEIQAQNLL
Sbjct: 241 GKVLASFATDGSGGLTPEKGFFKACTTLQSRGKLHGIFVWSADDSKKNNFRNEIQAQNLL 300

Query: 319 ANVE 323
           ANVE
Sbjct: 301 ANVE 304

[Close]

BLAST of CSPI06G16520 vs. ExPASy TrEMBL
Match: A0A1S3CLR6 (chitinase 2-like OS=Cucumis melo OX=3656 GN=LOC103501894 PE=3 SV=1)

HSP 1 Score: 609.0 bits (1569), Expect = 1.2e-170
Identity = 303/324 (93.52%), Postives = 307/324 (94.75%), Query Frame = 0


Query: 1   MHRCFRNGRSIIKLQPIIMGSSIFFLFSFLGFLFAILSLVKAEPLKNTRLFREYIGAEDK 60
           MH+CFRN RSIIKLQPIIMGS IFFLFSFLGFLFAIL  VKAEPLKNTRLFREYIGAEDK
Sbjct: 1   MHQCFRNRRSIIKLQPIIMGSRIFFLFSFLGFLFAILPSVKAEPLKNTRLFREYIGAEDK 60

Query: 61  NVRFSDVPIHSDVEFHFILSFAIDYTGSS--SPTNGKFNVFWDEENLTPSSISSIKAKHS 120
           NVRFSDVPIHSDVEFHFILSFAIDYTGSS  SPTNGKF VFWDE+NLTPSSISSIKAKHS
Sbjct: 61  NVRFSDVPIHSDVEFHFILSFAIDYTGSSSPSPTNGKFKVFWDEKNLTPSSISSIKAKHS 120

Query: 121 NVKFALSLGGDTVSDGTFAFFKPKSITSWVNNAFTSISHIVKEYDLDGVDIDYEHFKASP 180
           NVKFALSLGGDTV DG F FFKPKSITSWVNNAF SIS IVKEYDLDGVDIDYEHFKASP
Sbjct: 121 NVKFALSLGGDTVGDGIFVFFKPKSITSWVNNAFKSISDIVKEYDLDGVDIDYEHFKASP 180

Query: 181 NTFTECIGQLLQRLKRQNIISFASIAPFDDDTVQSHYMALWRKYGDLIDYVNFQFYSYGK 240
           +TFTECIGQLLQRLK QNIISFASIAPFDDDTVQSHYMALWRKYGDLIDYVNFQFYSYGK
Sbjct: 181 DTFTECIGQLLQRLKSQNIISFASIAPFDDDTVQSHYMALWRKYGDLIDYVNFQFYSYGK 240

Query: 241 GTTVSQFLNHFDAQSSNYEGGKVLASFATDGSGGLTPEKGFFKACTTLQSRGKLHGIFVW 300
           GTTVSQFLNHFD QSSNYEGGKVLASFATDGSGGL PEKGFFKAC TLQSRG+LHGIFVW
Sbjct: 241 GTTVSQFLNHFDTQSSNYEGGKVLASFATDGSGGLKPEKGFFKACNTLQSRGELHGIFVW 300

Query: 301 SADDSKKNNFRNEIQAQNLLANVE 323
           SADDSKKNNFRNEIQAQNLLAN E
Sbjct: 301 SADDSKKNNFRNEIQAQNLLANAE 324

[Close]

BLAST of CSPI06G16520 vs. ExPASy TrEMBL
Match: A0A5D3CQZ2 (Chitinase 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G00970 PE=3 SV=1)

HSP 1 Score: 576.2 bits (1484), Expect = 8.3e-161
Identity = 287/306 (93.79%), Postives = 290/306 (94.77%), Query Frame = 0


Query: 19  MGSSIFFLFSFLGFLFAILSLVKAEPLKNTRLFREYIGAEDKNVRFSDVPIHSDVEFHFI 78
           MGS IFFLFSFLGFLFAIL  VKAEPLKNTRLFREYIGAEDKNVRFSDVPIHSDVEFHFI
Sbjct: 1   MGSRIFFLFSFLGFLFAILPSVKAEPLKNTRLFREYIGAEDKNVRFSDVPIHSDVEFHFI 60

Query: 79  LSFAIDYTGSS--SPTNGKFNVFWDEENLTPSSISSIKAKHSNVKFALSLGGDTVSDGTF 138
           LSFAIDYTGSS  SPTNGKF VFWDE+NLTPSSISSIKAKHSNVKFALSLGGDTV DG F
Sbjct: 61  LSFAIDYTGSSSPSPTNGKFKVFWDEKNLTPSSISSIKAKHSNVKFALSLGGDTVGDGIF 120

Query: 139 AFFKPKSITSWVNNAFTSISHIVKEYDLDGVDIDYEHFKASPNTFTECIGQLLQRLKRQN 198
            FFKPKSITSWVNNAF SIS IVKEYDLDGVDIDYEHFKASP+TFTECIGQLLQRLK QN
Sbjct: 121 VFFKPKSITSWVNNAFKSISDIVKEYDLDGVDIDYEHFKASPDTFTECIGQLLQRLKSQN 180

Query: 199 IISFASIAPFDDDTVQSHYMALWRKYGDLIDYVNFQFYSYGKGTTVSQFLNHFDAQSSNY 258
           IISFASIAPFDDDTVQSHYMALWRKYGDLIDYVNFQFYSYGKGTTVSQFLNHFD QSSNY
Sbjct: 181 IISFASIAPFDDDTVQSHYMALWRKYGDLIDYVNFQFYSYGKGTTVSQFLNHFDTQSSNY 240

Query: 259 EGGKVLASFATDGSGGLTPEKGFFKACTTLQSRGKLHGIFVWSADDSKKNNFRNEIQAQN 318
           EGGKVLASFATDGSGGL PEKGFFKAC TLQSRG+LHGIFVWSADDSKKNNFRNEIQAQN
Sbjct: 241 EGGKVLASFATDGSGGLKPEKGFFKACNTLQSRGELHGIFVWSADDSKKNNFRNEIQAQN 300

Query: 319 LLANVE 323
           LLAN E
Sbjct: 301 LLANAE 306

[Close]

BLAST of CSPI06G16520 vs. ExPASy TrEMBL
Match: A0A6J1FUT9 (chitinase 2-like OS=Cucurbita moschata OX=3662 GN=LOC111448631 PE=3 SV=1)

HSP 1 Score: 526.6 bits (1355), Expect = 7.5e-146
Identity = 263/321 (81.93%), Postives = 284/321 (88.47%), Query Frame = 0


Query: 5   FRNGRSIIKLQPIIMGSS-IFFLFSFLGFLFAILSLVKAEPLKNTRLFREYIGAEDKNVR 64
           F   RS+IKLQPIIMGS+ IFFLFSFL  LF  L  ++A PL NTRLFREYIGA+  NVR
Sbjct: 4   FIKRRSVIKLQPIIMGSAQIFFLFSFLPLLFPTLPSLEATPLDNTRLFREYIGADGNNVR 63

Query: 65  FSDVPIHSDVEFHFILSFAIDYTGSSSP--TNGKFNVFWDEENLTPSSISSIKAKHSNVK 124
           FSDVPIH DVEFHFILSFAIDYT SSSP  TNGKF VFWDE+ L+PSS+SSIKA+HSNVK
Sbjct: 64  FSDVPIHPDVEFHFILSFAIDYTASSSPSATNGKFRVFWDEQILSPSSVSSIKAQHSNVK 123

Query: 125 FALSLGGDTVSDGTFAFFKPKSITSWVNNAFTSISHIVKEYDLDGVDIDYEHFKASPNTF 184
           FALSLGGDT     FA+FKPKSITSWV NAF SIS IVKEYD+DGVDIDYEHFKA P+ F
Sbjct: 124 FALSLGGDTAGK-QFAYFKPKSITSWVKNAFESISRIVKEYDIDGVDIDYEHFKAHPDVF 183

Query: 185 TECIGQLLQRLKRQNIISFASIAPFDDDTVQSHYMALWRKYGDLIDYVNFQFYSYGKGTT 244
           TECIG+LL RLKRQN+ISFASIAPFDDD VQ+HY+ALWRKYGDLIDYVNFQFY+YGKGTT
Sbjct: 184 TECIGKLLLRLKRQNVISFASIAPFDDDAVQTHYLALWRKYGDLIDYVNFQFYAYGKGTT 243

Query: 245 VSQFLNHFDAQSSNYEGGKVLASFATDGSGGLTPEKGFFKACTTLQSRGKLHGIFVWSAD 304
           VSQFLNHF+ Q+SNY+GGKVLASFATDGSGGLTPEKGFFKAC TLQSRGKLHGIFVWSAD
Sbjct: 244 VSQFLNHFETQTSNYQGGKVLASFATDGSGGLTPEKGFFKACRTLQSRGKLHGIFVWSAD 303

Query: 305 DSKKNNFRNEIQAQNLLANVE 323
           DSKKN F NEIQAQNLLAN +
Sbjct: 304 DSKKNKFHNEIQAQNLLANAD 323

[Close]

BLAST of CSPI06G16520 vs. ExPASy TrEMBL
Match: A0A6J1CWU0 (chitinase 2-like OS=Momordica charantia OX=3673 GN=LOC111015520 PE=3 SV=1)

HSP 1 Score: 521.9 bits (1343), Expect = 1.9e-144
Identity = 261/324 (80.56%), Postives = 283/324 (87.35%), Query Frame = 0


Query: 1   MHRCFRNGRSIIKLQPIIMGSSIFFLFSFLGFLFAILSLVKAEPLKNTRLFREYIGAEDK 60
           MH+ FRN R II+LQPI MGS IFFLFS L FL AIL  ++A P  NTRLFREYIGA D 
Sbjct: 1   MHQWFRNRRRIIQLQPITMGSRIFFLFSLLQFLSAILPSLEAAPKNNTRLFREYIGA-DG 60

Query: 61  NVRFSDVPIHSDVEFHFILSFAIDYTGSSSP--TNGKFNVFWDEENLTPSSISSIKAKHS 120
           NVRFSDVP+H DVEFHFILSFAIDYTG SSP  TNGKF VFWDE+NL+PSS+SSIKA+HS
Sbjct: 61  NVRFSDVPVHPDVEFHFILSFAIDYTGLSSPSATNGKFRVFWDEQNLSPSSVSSIKARHS 120

Query: 121 NVKFALSLGGDTVSDGTFAFFKPKSITSWVNNAFTSISHIVKEYDLDGVDIDYEHFKASP 180
           N+KFA+SLGGDTV    FA+FKPKS+ SWV NAF SIS IVKEY LDGVDIDYEHFKA P
Sbjct: 121 NIKFAVSLGGDTVGK-EFAYFKPKSVKSWVKNAFKSISRIVKEYHLDGVDIDYEHFKADP 180

Query: 181 NTFTECIGQLLQRLKRQNIISFASIAPFDDDTVQSHYMALWRKYGDLIDYVNFQFYSYGK 240
           +TFTECIGQLL RLK  N+ISFASIAPF+DDTVQSHY+ALWRKYG LIDYVNFQFYSY K
Sbjct: 181 DTFTECIGQLLLRLKHHNVISFASIAPFEDDTVQSHYLALWRKYGHLIDYVNFQFYSYDK 240

Query: 241 GTTVSQFLNHFDAQSSNYEGGKVLASFATDGSGGLTPEKGFFKACTTLQSRGKLHGIFVW 300
           GTTVSQF+NHF  QSSNY+GG VLASFATDGSGGLTPEKGFFKAC+ LQSRG+LHGIFVW
Sbjct: 241 GTTVSQFVNHFKTQSSNYQGGNVLASFATDGSGGLTPEKGFFKACSILQSRGELHGIFVW 300

Query: 301 SADDSKKNNFRNEIQAQNLLANVE 323
           SADDSKKNNFR+E QAQNLLAN E
Sbjct: 301 SADDSKKNNFRHEKQAQNLLANAE 322

[Close]

BLAST of CSPI06G16520 vs. NCBI nr
Match: XP_011657237.2 (chitinase 2 [Cucumis sativus] >KGN47334.1 hypothetical protein Csa_022924 [Cucumis sativus])

HSP 1 Score: 614.0 bits (1582), Expect = 7.4e-172
Identity = 303/304 (99.67%), Postives = 304/304 (100.00%), Query Frame = 0


Query: 19  MGSSIFFLFSFLGFLFAILSLVKAEPLKNTRLFREYIGAEDKNVRFSDVPIHSDVEFHFI 78
           MGSSIFFLFSFLGFLFAILSLVKAEPLKNTRLFREYIGAEDKNVRFSDVPIHSDVEFHFI
Sbjct: 1   MGSSIFFLFSFLGFLFAILSLVKAEPLKNTRLFREYIGAEDKNVRFSDVPIHSDVEFHFI 60

Query: 79  LSFAIDYTGSSSPTNGKFNVFWDEENLTPSSISSIKAKHSNVKFALSLGGDTVSDGTFAF 138
           LSFAIDYTGSSSPTNGKFNVFWDEENLTPSSISSIKAKHSNVKFALSLGGDTVSDGTFAF
Sbjct: 61  LSFAIDYTGSSSPTNGKFNVFWDEENLTPSSISSIKAKHSNVKFALSLGGDTVSDGTFAF 120

Query: 139 FKPKSITSWVNNAFTSISHIVKEYDLDGVDIDYEHFKASPNTFTECIGQLLQRLKRQNII 198
           FKPKSITSWVNNAFTSISHIVKEYDLDGVDIDYEHFKASPNTFTECIGQLLQRLKRQNII
Sbjct: 121 FKPKSITSWVNNAFTSISHIVKEYDLDGVDIDYEHFKASPNTFTECIGQLLQRLKRQNII 180

Query: 199 SFASIAPFDDDTVQSHYMALWRKYGDLIDYVNFQFYSYGKGTTVSQFLNHFDAQSSNYEG 258
           SFASIAPFDDDTVQSHYMALWRKYGDLIDYVNFQFYSYG+GTTVSQFLNHFDAQSSNYEG
Sbjct: 181 SFASIAPFDDDTVQSHYMALWRKYGDLIDYVNFQFYSYGEGTTVSQFLNHFDAQSSNYEG 240

Query: 259 GKVLASFATDGSGGLTPEKGFFKACTTLQSRGKLHGIFVWSADDSKKNNFRNEIQAQNLL 318
           GKVLASFATDGSGGLTPEKGFFKACTTLQSRGKLHGIFVWSADDSKKNNFRNEIQAQNLL
Sbjct: 241 GKVLASFATDGSGGLTPEKGFFKACTTLQSRGKLHGIFVWSADDSKKNNFRNEIQAQNLL 300

Query: 319 ANVE 323
           ANVE
Sbjct: 301 ANVE 304

[Close]

BLAST of CSPI06G16520 vs. NCBI nr
Match: XP_008463861.1 (PREDICTED: chitinase 2-like [Cucumis melo])

HSP 1 Score: 609.0 bits (1569), Expect = 2.4e-170
Identity = 303/324 (93.52%), Postives = 307/324 (94.75%), Query Frame = 0


Query: 1   MHRCFRNGRSIIKLQPIIMGSSIFFLFSFLGFLFAILSLVKAEPLKNTRLFREYIGAEDK 60
           MH+CFRN RSIIKLQPIIMGS IFFLFSFLGFLFAIL  VKAEPLKNTRLFREYIGAEDK
Sbjct: 1   MHQCFRNRRSIIKLQPIIMGSRIFFLFSFLGFLFAILPSVKAEPLKNTRLFREYIGAEDK 60

Query: 61  NVRFSDVPIHSDVEFHFILSFAIDYTGSS--SPTNGKFNVFWDEENLTPSSISSIKAKHS 120
           NVRFSDVPIHSDVEFHFILSFAIDYTGSS  SPTNGKF VFWDE+NLTPSSISSIKAKHS
Sbjct: 61  NVRFSDVPIHSDVEFHFILSFAIDYTGSSSPSPTNGKFKVFWDEKNLTPSSISSIKAKHS 120

Query: 121 NVKFALSLGGDTVSDGTFAFFKPKSITSWVNNAFTSISHIVKEYDLDGVDIDYEHFKASP 180
           NVKFALSLGGDTV DG F FFKPKSITSWVNNAF SIS IVKEYDLDGVDIDYEHFKASP
Sbjct: 121 NVKFALSLGGDTVGDGIFVFFKPKSITSWVNNAFKSISDIVKEYDLDGVDIDYEHFKASP 180

Query: 181 NTFTECIGQLLQRLKRQNIISFASIAPFDDDTVQSHYMALWRKYGDLIDYVNFQFYSYGK 240
           +TFTECIGQLLQRLK QNIISFASIAPFDDDTVQSHYMALWRKYGDLIDYVNFQFYSYGK
Sbjct: 181 DTFTECIGQLLQRLKSQNIISFASIAPFDDDTVQSHYMALWRKYGDLIDYVNFQFYSYGK 240

Query: 241 GTTVSQFLNHFDAQSSNYEGGKVLASFATDGSGGLTPEKGFFKACTTLQSRGKLHGIFVW 300
           GTTVSQFLNHFD QSSNYEGGKVLASFATDGSGGL PEKGFFKAC TLQSRG+LHGIFVW
Sbjct: 241 GTTVSQFLNHFDTQSSNYEGGKVLASFATDGSGGLKPEKGFFKACNTLQSRGELHGIFVW 300

Query: 301 SADDSKKNNFRNEIQAQNLLANVE 323
           SADDSKKNNFRNEIQAQNLLAN E
Sbjct: 301 SADDSKKNNFRNEIQAQNLLANAE 324

[Close]

BLAST of CSPI06G16520 vs. NCBI nr
Match: KAA0035279.1 (chitinase 2-like [Cucumis melo var. makuwa] >TYK14357.1 chitinase 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 576.2 bits (1484), Expect = 1.7e-160
Identity = 287/306 (93.79%), Postives = 290/306 (94.77%), Query Frame = 0


Query: 19  MGSSIFFLFSFLGFLFAILSLVKAEPLKNTRLFREYIGAEDKNVRFSDVPIHSDVEFHFI 78
           MGS IFFLFSFLGFLFAIL  VKAEPLKNTRLFREYIGAEDKNVRFSDVPIHSDVEFHFI
Sbjct: 1   MGSRIFFLFSFLGFLFAILPSVKAEPLKNTRLFREYIGAEDKNVRFSDVPIHSDVEFHFI 60

Query: 79  LSFAIDYTGSS--SPTNGKFNVFWDEENLTPSSISSIKAKHSNVKFALSLGGDTVSDGTF 138
           LSFAIDYTGSS  SPTNGKF VFWDE+NLTPSSISSIKAKHSNVKFALSLGGDTV DG F
Sbjct: 61  LSFAIDYTGSSSPSPTNGKFKVFWDEKNLTPSSISSIKAKHSNVKFALSLGGDTVGDGIF 120

Query: 139 AFFKPKSITSWVNNAFTSISHIVKEYDLDGVDIDYEHFKASPNTFTECIGQLLQRLKRQN 198
            FFKPKSITSWVNNAF SIS IVKEYDLDGVDIDYEHFKASP+TFTECIGQLLQRLK QN
Sbjct: 121 VFFKPKSITSWVNNAFKSISDIVKEYDLDGVDIDYEHFKASPDTFTECIGQLLQRLKSQN 180

Query: 199 IISFASIAPFDDDTVQSHYMALWRKYGDLIDYVNFQFYSYGKGTTVSQFLNHFDAQSSNY 258
           IISFASIAPFDDDTVQSHYMALWRKYGDLIDYVNFQFYSYGKGTTVSQFLNHFD QSSNY
Sbjct: 181 IISFASIAPFDDDTVQSHYMALWRKYGDLIDYVNFQFYSYGKGTTVSQFLNHFDTQSSNY 240

Query: 259 EGGKVLASFATDGSGGLTPEKGFFKACTTLQSRGKLHGIFVWSADDSKKNNFRNEIQAQN 318
           EGGKVLASFATDGSGGL PEKGFFKAC TLQSRG+LHGIFVWSADDSKKNNFRNEIQAQN
Sbjct: 241 EGGKVLASFATDGSGGLKPEKGFFKACNTLQSRGELHGIFVWSADDSKKNNFRNEIQAQN 300

Query: 319 LLANVE 323
           LLAN E
Sbjct: 301 LLANAE 306

[Close]

BLAST of CSPI06G16520 vs. NCBI nr
Match: XP_022944087.1 (chitinase 2-like [Cucurbita moschata])

HSP 1 Score: 526.6 bits (1355), Expect = 1.6e-145
Identity = 263/321 (81.93%), Postives = 284/321 (88.47%), Query Frame = 0


Query: 5   FRNGRSIIKLQPIIMGSS-IFFLFSFLGFLFAILSLVKAEPLKNTRLFREYIGAEDKNVR 64
           F   RS+IKLQPIIMGS+ IFFLFSFL  LF  L  ++A PL NTRLFREYIGA+  NVR
Sbjct: 4   FIKRRSVIKLQPIIMGSAQIFFLFSFLPLLFPTLPSLEATPLDNTRLFREYIGADGNNVR 63

Query: 65  FSDVPIHSDVEFHFILSFAIDYTGSSSP--TNGKFNVFWDEENLTPSSISSIKAKHSNVK 124
           FSDVPIH DVEFHFILSFAIDYT SSSP  TNGKF VFWDE+ L+PSS+SSIKA+HSNVK
Sbjct: 64  FSDVPIHPDVEFHFILSFAIDYTASSSPSATNGKFRVFWDEQILSPSSVSSIKAQHSNVK 123

Query: 125 FALSLGGDTVSDGTFAFFKPKSITSWVNNAFTSISHIVKEYDLDGVDIDYEHFKASPNTF 184
           FALSLGGDT     FA+FKPKSITSWV NAF SIS IVKEYD+DGVDIDYEHFKA P+ F
Sbjct: 124 FALSLGGDTAGK-QFAYFKPKSITSWVKNAFESISRIVKEYDIDGVDIDYEHFKAHPDVF 183

Query: 185 TECIGQLLQRLKRQNIISFASIAPFDDDTVQSHYMALWRKYGDLIDYVNFQFYSYGKGTT 244
           TECIG+LL RLKRQN+ISFASIAPFDDD VQ+HY+ALWRKYGDLIDYVNFQFY+YGKGTT
Sbjct: 184 TECIGKLLLRLKRQNVISFASIAPFDDDAVQTHYLALWRKYGDLIDYVNFQFYAYGKGTT 243

Query: 245 VSQFLNHFDAQSSNYEGGKVLASFATDGSGGLTPEKGFFKACTTLQSRGKLHGIFVWSAD 304
           VSQFLNHF+ Q+SNY+GGKVLASFATDGSGGLTPEKGFFKAC TLQSRGKLHGIFVWSAD
Sbjct: 244 VSQFLNHFETQTSNYQGGKVLASFATDGSGGLTPEKGFFKACRTLQSRGKLHGIFVWSAD 303

Query: 305 DSKKNNFRNEIQAQNLLANVE 323
           DSKKN F NEIQAQNLLAN +
Sbjct: 304 DSKKNKFHNEIQAQNLLANAD 323

[Close]

BLAST of CSPI06G16520 vs. NCBI nr
Match: XP_022146270.1 (chitinase 2-like [Momordica charantia])

HSP 1 Score: 521.9 bits (1343), Expect = 3.8e-144
Identity = 261/324 (80.56%), Postives = 283/324 (87.35%), Query Frame = 0


Query: 1   MHRCFRNGRSIIKLQPIIMGSSIFFLFSFLGFLFAILSLVKAEPLKNTRLFREYIGAEDK 60
           MH+ FRN R II+LQPI MGS IFFLFS L FL AIL  ++A P  NTRLFREYIGA D 
Sbjct: 1   MHQWFRNRRRIIQLQPITMGSRIFFLFSLLQFLSAILPSLEAAPKNNTRLFREYIGA-DG 60

Query: 61  NVRFSDVPIHSDVEFHFILSFAIDYTGSSSP--TNGKFNVFWDEENLTPSSISSIKAKHS 120
           NVRFSDVP+H DVEFHFILSFAIDYTG SSP  TNGKF VFWDE+NL+PSS+SSIKA+HS
Sbjct: 61  NVRFSDVPVHPDVEFHFILSFAIDYTGLSSPSATNGKFRVFWDEQNLSPSSVSSIKARHS 120

Query: 121 NVKFALSLGGDTVSDGTFAFFKPKSITSWVNNAFTSISHIVKEYDLDGVDIDYEHFKASP 180
           N+KFA+SLGGDTV    FA+FKPKS+ SWV NAF SIS IVKEY LDGVDIDYEHFKA P
Sbjct: 121 NIKFAVSLGGDTVGK-EFAYFKPKSVKSWVKNAFKSISRIVKEYHLDGVDIDYEHFKADP 180

Query: 181 NTFTECIGQLLQRLKRQNIISFASIAPFDDDTVQSHYMALWRKYGDLIDYVNFQFYSYGK 240
           +TFTECIGQLL RLK  N+ISFASIAPF+DDTVQSHY+ALWRKYG LIDYVNFQFYSY K
Sbjct: 181 DTFTECIGQLLLRLKHHNVISFASIAPFEDDTVQSHYLALWRKYGHLIDYVNFQFYSYDK 240

Query: 241 GTTVSQFLNHFDAQSSNYEGGKVLASFATDGSGGLTPEKGFFKACTTLQSRGKLHGIFVW 300
           GTTVSQF+NHF  QSSNY+GG VLASFATDGSGGLTPEKGFFKAC+ LQSRG+LHGIFVW
Sbjct: 241 GTTVSQFVNHFKTQSSNYQGGNVLASFATDGSGGLTPEKGFFKACSILQSRGELHGIFVW 300

Query: 301 SADDSKKNNFRNEIQAQNLLANVE 323
           SADDSKKNNFR+E QAQNLLAN E
Sbjct: 301 SADDSKKNNFRHEKQAQNLLANAE 322

The following BLAST results are available for this feature:

BLAST of CSPI06G16520 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SLP4	1.5e-103	61.74	Chitinase 1 OS=Tulipa saxatilis subsp. bakeri OX=110455 PE=1 SV=1	[more]
Q7M443	5.6e-98	62.55	Chitinase 2 OS=Tulipa saxatilis subsp. bakeri OX=110455 PE=1 SV=1	[more]
P39657	6.2e-20	33.16	RuBisCO-associated protein OS=Glycine max OX=3847 PE=2 SV=1	[more]

BLAST of CSPI06G16520 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KES2	3.6e-172	99.67	Glyco_hydro_18 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G301...	[more]
A0A1S3CLR6	1.2e-170	93.52	chitinase 2-like OS=Cucumis melo OX=3656 GN=LOC103501894 PE=3 SV=1	[more]
A0A5D3CQZ2	8.3e-161	93.79	Chitinase 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G0097...	[more]
A0A6J1FUT9	7.5e-146	81.93	chitinase 2-like OS=Cucurbita moschata OX=3662 GN=LOC111448631 PE=3 SV=1	[more]
A0A6J1CWU0	1.9e-144	80.56	chitinase 2-like OS=Momordica charantia OX=3673 GN=LOC111015520 PE=3 SV=1	[more]

BLAST of CSPI06G16520 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011657237.2	7.4e-172	99.67	chitinase 2 [Cucumis sativus] >KGN47334.1 hypothetical protein Csa_022924 [Cucum...	[more]
XP_008463861.1	2.4e-170	93.52	PREDICTED: chitinase 2-like [Cucumis melo]	[more]
KAA0035279.1	1.7e-160	93.79	chitinase 2-like [Cucumis melo var. makuwa] >TYK14357.1 chitinase 2-like [Cucumi...	[more]
XP_022944087.1	1.6e-145	81.93	chitinase 2-like [Cucurbita moschata]	[more]
XP_022146270.1	3.8e-144	80.56	chitinase 2-like [Momordica charantia]	[more]

BLAST of CSPI06G16520 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000677	Chitinase-like	PRINTS	PR00551	2SGLOBULIN	coord: 110..128 score: 38.6 coord: 48..61 score: 42.86 coord: 93..108 score: 32.81 coord: 281..300 score: 40.0
None	No IPR available	GENE3D	3.20.20.80	Glycosidases	coord: 47..321 e-value: 1.3E-90 score: 305.7
None	No IPR available	PANTHER	PTHR46476:SF3	CHITINASE 2	coord: 27..321
None	No IPR available	PANTHER	PTHR46476	CHITINASE 2-LIKE	coord: 27..321
None	No IPR available	CDD	cd06544	GH18_narbonin	coord: 50..303 e-value: 2.45248E-129 score: 367.467
IPR001223	Glycoside hydrolase family 18, catalytic domain	PFAM	PF00704	Glyco_hydro_18	coord: 76..244 e-value: 2.1E-16 score: 60.6
IPR001223	Glycoside hydrolase family 18, catalytic domain	PROSITE	PS51910	GH18_2	coord: 49..322 score: 26.599911
IPR001579	Glycosyl hydrolases family 18 (GH18) active site	PROSITE	PS01095	GH18_1	coord: 164..172
IPR017853	Glycoside hydrolase superfamily	SUPERFAMILY	51445	(Trans)glycosidases	coord: 45..319

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G16520.1	CSPI06G16520.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds