CSPI06G11090 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI06G11090
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	DEAD-box ATP-dependent RNA helicase 36
Location	Chr6: 9693706 .. 9697459 (+)
RNA-Seq Expression	CSPI06G11090
Synteny	CSPI06G11090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACTTATGTAAATTTAAACCTTATAATATAATATTCCTATAGATGTTTATGGTGACTTAGGGTATGGGGTATCGGCTTACCTTGCCGTCGCTTCTCTTCCTCGCCTTTGACTGACTTTTCATACGCTGATTTTGCCCTAATTTAACGGTTCGCACTTTTGCACGGCGCCAATCCTTCGAAATTTTGCTCCAATTTTTCAAACCTGCAAACCCTTTGGATTCTTGTTCCATGGATCAAGAAGTAATTGTCGACCGGAATTTCCCGCTTTTCTCAAAACCCCATCGGAAAAAGCATAAACCTTCCGAAAACCCTACCGCCGTCCCGAACGTTGCTCCGAAAAAGTCTCTTCAGATTGAGAAATCCACAGAACTTGCCACTAAATCCACCAACAATATCACATTTGCCGACCTGGGATTGTCGGAATGGATCATCCAGACCTGCAAAGAATTGGTTATGAAGAAGCCCACGGCTGTTCAAACCCACTGCATCCCTAAGATTCTTGCTGGCCTCGACGTACTTGGTATTGCTCAAACTGGGAGTGGGAAGACTGCTGCCTTTGCGTTGCCTATTCTTCAACGACTTTCAGAGACCCCTTTTGGTGTATTTGCGTTGGTGGTTACTCCCACTAGGGAACTGGCCTATCAATTGGCTGAGCAGTTTAGAGCACTTGGTTCCTGCTTGAATTTGCGATGCTCTGTGGTTGTTGGAGGAATGGATATGTTGAACCAGACGCAGAGTTTGTTGAAGAGACCTCATATTGTAATTGCAACGCCGGGGCGGATTAAGGTATTACTGGAGGATAATCCTGATATCCCTGTCGTCTTCTCCAAGACTAAGGTTCGTTAAATTGGTTCTTCGTTCGTTTCTATTATAGATGTGGGACTAGCTAATTTGAATTTGGTTAGTATTGAAAGGTCAGATGATTAATGGGTATTGGTAGATGAACAGAAATGCCATATATTTTTTTACATTTGTTTTGAAATGAAACGATGAAAGGGGGAAAAATCATCCAAGTTCTACATGGGGCTAATGGCTAATGGGTGAGAACTTTCCAGTTCAGGAGTTGAGATTCTGAGTTTTTTCAATTTTGTTCTATTGCACACAAGACGAGATATATTATTGGTGGTAACTAAGATAAAGAAAGTGATTTTTTATAATATGCTTGGGAGTGATTGTGAAATTGTTAACTTCGCTTTTGTGGTGTTTAGATCACGCTCTGAAAAACACTTGCAACTAATTTAGCATTTAAGTTTATACTTTTAAATTTAATTTAAATGTCATGAAAATTGGTTTTGAACTATTAAAAACATGTTTTCAAGTGATTTTGGCTTCTTTTTCTCATGCACGAGGAAGCTGTTTGTTGTTTCATAGTTGCTTGTCATGTTCGTAACGTTCATGTTCTCATATCTGCATAACCCCATAACTGCAAAACTTCTCATTTTTTTGGATAATGACCAAGCAGCTCATGTTCGTGACTTTTTTTATTATCCATTGATACTTCAGTTCTTAGTTCTGGATGAAGCAGATAGAGTATTAGATGTTGGCTTTGAAGAAGAGTTGAAAGTAATCTTCCAATGCTTGCCACGTAACCGTCAAACTCTATTATTCTCTGCAACGATGACAAAGGATCTGGAAACACTGCACAAGCTTTCTGCAAACAAGGCCTACTTTTACGAGGCTTATGAAGGGTTCAAGACAGTTGATATGCTCAAGCAGCAATATGTATTTATACCCAAGGATGTGAAGGATCTGTATTTATTACATCTTTTGTCTAAAATGGAAGACATGGGTATTCGATCAGCAATTATATTTGTCCAAACTTGCAAGTATGCATTTTTTGGCCTTCACTTCCTTATTCTCTGTCTATCTCTCCCCCACAGTATTCATATGAACATTGGCATAGGTTTTAACTTTCAAATCTTATTAACTTAGCATTGTAAAAGCTTTAATTAATTGATTTCTTTAACTACTCTACCTAAAGCTGGTGTTTATTCTTTCCTCCAACTGTATGCAGAAGTTGTCACCTATTAGGGTTGTTGCTTGAAGCACTTGATCAGGAGGTGGCGGCATTGCATTCAGTTAAGTCACAGTCTGAGAGGCTTGCTGCACTATATCGGTTTAAATCAGGACAAGTTCCTGTGTTGCTTGCAACTGATGTTGCTAGTCGAGGTTTGGATATTCCAACAGTTGATCTTGTTATCAACTACGATATTCCAAGGTGGGCTTTTAAATTGATTTCTTCTGCTTACAATAGAAGTGTTCTCAAAATGTTTTGTGACATAATATAGTGGCATTTTAATTCAGGTTCCCAAGAGATTATGTTCACCGAGTGGGACGTACGGCACGTGCAGGCAGAGGAGGATTGGCTATGAGCTTTATTACCCAGGTGGGTGTTACTAATGTGGTGGATTATTGTAACATTTCAATTCAGCATGTTTCTTGGAGATGAGCTCAACATCAAATGTTAAAAAGTTTCTTAAAGAAGTCGTTTTTCATATGTAGTGTGAATGGTTATCAGTAAGCTACATCATGCTTGTAATATCATATAGTAGCTGTTCTTGCTATTTCTTCCATATTAAACATTCTCCAATTTACGTGGGTTATTTATTTTAAAAAATGTGGGTAATAGGACAATCAATGTGGGGGTATGAAATTTGAACCTCCGACTCTTAGGAAAAAATGTATGTGTACATGCAAATTATGCAAATGTATGTGTACATGCAAATTATGCCTGAGCTACGCTCATGTTGGCAAATCTGTGCAATGATAAAATGGATTTGTAATCAAGGTTATATTATTATTACTGTCATGCAATTGCAAAATCTACCACGCTATCCATGCAGAAAAGTTATAAGTTGCATATGTTTTTTGTCTTCATCGCTTTAAGCAAATGCTTTTCCTGAGTTATATTTGTTTTCTTACACTTAAACATGAATTCTGTTTGCAGAATGATGTGCACCTTATTCATGAAATAGAGGCCAATCTTGGAAAGCAATTGGAGATTTTTGAATGCAAGGAGAACGAAGTGCTTGAAAATATCACCAAGGTAAGTTTTGGATGCTTTGACTATTTTCCTCCTTCAACGCAATGACAGAACTTTGGATGCGAAACAAATTTCTGTATTTTATACCGCTTGCCAATTGAACTTGAAGCCAATTTAACGTTGGAGGGAAAAACAATTTCCTGCTCTCCTATTCGATCACCATGGAGTTCTTACCACAAAAGTTATTTATAGTGAAACTGTTTTGTTATCTTGCAACACTGGTGACAAGACAACATCTGTTTTTTGAGGGACCATCTGTGCATCAGGACGCATGCGTTTGATCATCTCATTCATTCTACTTCATAACATTCATCTGACAATCAGATGATATTTGGTTTTTGCATTTCTTGTCATTATATTGAGAGGCCATGGAGTTTGATTCATCTTGTAACGTTTATACACAGGTTTACAAAGCTAGACATGTGGCAAAAATGAAGATGGTGGATGGTGGATTTGAGGAGAAAGTGAAAGAACGAAAGAAACAGAAAAGAAAAACATTGGCAGAGAAAGGATTATTGAAGAAACGGAACAAAAGGAGAAGAAAAGAAAAAACTTCCGAGTAATTGGCAGTTGGTTGTATGAGAATCTCAACTACCATCATCAAAGTTTTGATATTGCTTAATTTTAATGTGTAATTATTTTCCCAGCGGTTTAGTGTCTTTTGGCTCTTCCCTTAGAAAATTCCATAGAGAGATAGAATAATGGTGGGGG

mRNA sequence

AACTTATGTAAATTTAAACCTTATAATATAATATTCCTATAGATGTTTATGGTGACTTAGGGTATGGGGTATCGGCTTACCTTGCCGTCGCTTCTCTTCCTCGCCTTTGACTGACTTTTCATACGCTGATTTTGCCCTAATTTAACGGTTCGCACTTTTGCACGGCGCCAATCCTTCGAAATTTTGCTCCAATTTTTCAAACCTGCAAACCCTTTGGATTCTTGTTCCATGGATCAAGAAGTAATTGTCGACCGGAATTTCCCGCTTTTCTCAAAACCCCATCGGAAAAAGCATAAACCTTCCGAAAACCCTACCGCCGTCCCGAACGTTGCTCCGAAAAAGTCTCTTCAGATTGAGAAATCCACAGAACTTGCCACTAAATCCACCAACAATATCACATTTGCCGACCTGGGATTGTCGGAATGGATCATCCAGACCTGCAAAGAATTGGTTATGAAGAAGCCCACGGCTGTTCAAACCCACTGCATCCCTAAGATTCTTGCTGGCCTCGACGTACTTGGTATTGCTCAAACTGGGAGTGGGAAGACTGCTGCCTTTGCGTTGCCTATTCTTCAACGACTTTCAGAGACCCCTTTTGGTGTATTTGCGTTGGTGGTTACTCCCACTAGGGAACTGGCCTATCAATTGGCTGAGCAGTTTAGAGCACTTGGTTCCTGCTTGAATTTGCGATGCTCTGTGGTTGTTGGAGGAATGGATATGTTGAACCAGACGCAGAGTTTGTTGAAGAGACCTCATATTGTAATTGCAACGCCGGGGCGGATTAAGGTATTACTGGAGGATAATCCTGATATCCCTGTCGTCTTCTCCAAGACTAAGTTCTTAGTTCTGGATGAAGCAGATAGAGTATTAGATGTTGGCTTTGAAGAAGAGTTGAAAGTAATCTTCCAATGCTTGCCACGTAACCGTCAAACTCTATTATTCTCTGCAACGATGACAAAGGATCTGGAAACACTGCACAAGCTTTCTGCAAACAAGGCCTACTTTTACGAGGCTTATGAAGGGTTCAAGACAGTTGATATGCTCAAGCAGCAATATGTATTTATACCCAAGGATGTGAAGGATCTGTATTTATTACATCTTTTGTCTAAAATGGAAGACATGGGTATTCGATCAGCAATTATATTTGTCCAAACTTGCAAAAGTTGTCACCTATTAGGGTTGTTGCTTGAAGCACTTGATCAGGAGGTGGCGGCATTGCATTCAGTTAAGTCACAGTCTGAGAGGCTTGCTGCACTATATCGGTTTAAATCAGGACAAGTTCCTGTGTTGCTTGCAACTGATGTTGCTAGTCGAGGTTTGGATATTCCAACAGTTGATCTTGTTATCAACTACGATATTCCAAGGTTCCCAAGAGATTATGTTCACCGAGTGGGACGTACGGCACGTGCAGGCAGAGGAGGATTGGCTATGAGCTTTATTACCCAGAATGATGTGCACCTTATTCATGAAATAGAGGCCAATCTTGGAAAGCAATTGGAGATTTTTGAATGCAAGGAGAACGAAGTGCTTGAAAATATCACCAAGGTTTACAAAGCTAGACATGTGGCAAAAATGAAGATGGTGGATGGTGGATTTGAGGAGAAAGTGAAAGAACGAAAGAAACAGAAAAGAAAAACATTGGCAGAGAAAGGATTATTGAAGAAACGGAACAAAAGGAGAAGAAAAGAAAAAACTTCCGAGTAATTGGCAGTTGGTTGTATGAGAATCTCAACTACCATCATCAAAGTTTTGATATTGCTTAATTTTAATGTGTAATTATTTTCCCAGCGGTTTAGTGTCTTTTGGCTCTTCCCTTAGAAAATTCCATAGAGAGATAGAATAATGGTGGGGG

Coding sequence (CDS)

ATGGATCAAGAAGTAATTGTCGACCGGAATTTCCCGCTTTTCTCAAAACCCCATCGGAAAAAGCATAAACCTTCCGAAAACCCTACCGCCGTCCCGAACGTTGCTCCGAAAAAGTCTCTTCAGATTGAGAAATCCACAGAACTTGCCACTAAATCCACCAACAATATCACATTTGCCGACCTGGGATTGTCGGAATGGATCATCCAGACCTGCAAAGAATTGGTTATGAAGAAGCCCACGGCTGTTCAAACCCACTGCATCCCTAAGATTCTTGCTGGCCTCGACGTACTTGGTATTGCTCAAACTGGGAGTGGGAAGACTGCTGCCTTTGCGTTGCCTATTCTTCAACGACTTTCAGAGACCCCTTTTGGTGTATTTGCGTTGGTGGTTACTCCCACTAGGGAACTGGCCTATCAATTGGCTGAGCAGTTTAGAGCACTTGGTTCCTGCTTGAATTTGCGATGCTCTGTGGTTGTTGGAGGAATGGATATGTTGAACCAGACGCAGAGTTTGTTGAAGAGACCTCATATTGTAATTGCAACGCCGGGGCGGATTAAGGTATTACTGGAGGATAATCCTGATATCCCTGTCGTCTTCTCCAAGACTAAGTTCTTAGTTCTGGATGAAGCAGATAGAGTATTAGATGTTGGCTTTGAAGAAGAGTTGAAAGTAATCTTCCAATGCTTGCCACGTAACCGTCAAACTCTATTATTCTCTGCAACGATGACAAAGGATCTGGAAACACTGCACAAGCTTTCTGCAAACAAGGCCTACTTTTACGAGGCTTATGAAGGGTTCAAGACAGTTGATATGCTCAAGCAGCAATATGTATTTATACCCAAGGATGTGAAGGATCTGTATTTATTACATCTTTTGTCTAAAATGGAAGACATGGGTATTCGATCAGCAATTATATTTGTCCAAACTTGCAAAAGTTGTCACCTATTAGGGTTGTTGCTTGAAGCACTTGATCAGGAGGTGGCGGCATTGCATTCAGTTAAGTCACAGTCTGAGAGGCTTGCTGCACTATATCGGTTTAAATCAGGACAAGTTCCTGTGTTGCTTGCAACTGATGTTGCTAGTCGAGGTTTGGATATTCCAACAGTTGATCTTGTTATCAACTACGATATTCCAAGGTTCCCAAGAGATTATGTTCACCGAGTGGGACGTACGGCACGTGCAGGCAGAGGAGGATTGGCTATGAGCTTTATTACCCAGAATGATGTGCACCTTATTCATGAAATAGAGGCCAATCTTGGAAAGCAATTGGAGATTTTTGAATGCAAGGAGAACGAAGTGCTTGAAAATATCACCAAGGTTTACAAAGCTAGACATGTGGCAAAAATGAAGATGGTGGATGGTGGATTTGAGGAGAAAGTGAAAGAACGAAAGAAACAGAAAAGAAAAACATTGGCAGAGAAAGGATTATTGAAGAAACGGAACAAAAGGAGAAGAAAAGAAAAAACTTCCGAGTAA

Protein sequence

MDQEVIVDRNFPLFSKPHRKKHKPSENPTAVPNVAPKKSLQIEKSTELATKSTNNITFADLGLSEWIIQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPILQRLSETPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLNQTQSLLKRPHIVIATPGRIKVLLEDNPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNRQTLLFSATMTKDLETLHKLSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHLLSKMEDMGIRSAIIFVQTCKSCHLLGLLLEALDQEVAALHSVKSQSERLAALYRFKSGQVPVLLATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAMSFITQNDVHLIHEIEANLGKQLEIFECKENEVLENITKVYKARHVAKMKMVDGGFEEKVKERKKQKRKTLAEKGLLKKRNKRRRKEKTSE*

Homology

[Close]

BLAST of CSPI06G11090 vs. ExPASy Swiss-Prot
Match: Q9SA27 (DEAD-box ATP-dependent RNA helicase 36 OS=Arabidopsis thaliana OX=3702 GN=RH36 PE=2 SV=1)

HSP 1 Score: 620.2 bits (1598), Expect = 2.1e-176
Identity = 323/471 (68.58%), Postives = 389/471 (82.59%), Query Frame = 0


Query: 23  KPSENPTAVPNVAPKK------SLQIEKST--ELATKSTNNITFADLGLSEWIIQTCKEL 82
           K  +NP  V N+  +K      + Q EK T    ++ +T+   F  LGL+EW ++TCKEL
Sbjct: 17  KSRKNPKTVVNIQSQKLDSDQNTPQFEKFTNPNPSSDTTSATNFEGLGLAEWAVETCKEL 76

Query: 83  VMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPILQRLSETPFGVFALVVTPTR 142
            M+KPT VQTHC+PKILAG DVLG+AQTGSGKTAAFALPIL RL+E P+GVFALVVTPTR
Sbjct: 77  GMRKPTPVQTHCVPKILAGRDVLGLAQTGSGKTAAFALPILHRLAEDPYGVFALVVTPTR 136

Query: 143 ELAYQLAEQFRALGSCLNLRCSVVVGGMDMLNQTQSLLKRPHIVIATPGRIKVLLEDNPD 202
           ELA+QLAEQF+ALGSCLNLRCSV+VGGMDML QT SL+ RPHIVI TPGRIKVLLE+NPD
Sbjct: 137 ELAFQLAEQFKALGSCLNLRCSVIVGGMDMLTQTMSLVSRPHIVITTPGRIKVLLENNPD 196

Query: 203 IPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNRQTLLFSATMTKDLETLHKLSA 262
           +P VFS+TKFLVLDEADRVLDVGF++EL+ IFQCLP++RQTLLFSATMT +L+ L + S+
Sbjct: 197 VPPVFSRTKFLVLDEADRVLDVGFQDELRTIFQCLPKSRQTLLFSATMTSNLQALLEHSS 256

Query: 263 NKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHLLSKMEDMGIRSAIIFVQTCKSCH 322
           NKAYFYEAYEG KTVD L QQ++F  KD K+LYL+H+LS+MED GIRSA+IFV TC++C 
Sbjct: 257 NKAYFYEAYEGLKTVDTLTQQFIFEDKDAKELYLVHILSQMEDKGIRSAMIFVSTCRTCQ 316

Query: 323 LLGLLLEALDQEVAALHSVKSQSERLAALYRFKSGQVPVLLATDVASRGLDIPTVDLVIN 382
            L L+L+ L+ E  A+HS+ SQS RL+AL +FKSG+VP+LLATDVASRGLDIPTVDLVIN
Sbjct: 317 RLSLMLDELEVENIAMHSLNSQSMRLSALSKFKSGKVPILLATDVASRGLDIPTVDLVIN 376

Query: 383 YDIPRFPRDYVHRVGRTARAGRGGLAMSFITQNDVHLIHEIEANLGKQLEIFECKENEVL 442
           YDIPR PRDYVHRVGRTARAGRGGLA+S IT+ DV LIH+IE  +GK++E +  K     
Sbjct: 377 YDIPRDPRDYVHRVGRTARAGRGGLAVSIITETDVKLIHKIEEEVGKKMEPYNKKVITDS 436

Query: 443 ENITKVYKARHVAKMKMVDGGFEEKVKERKKQKRKTLAEKGLLKKRNKRRR 486
             +TKV KA+ VA MKM+D GFE+KVK+R+K KRKTLA+KGLLKKR KR++
Sbjct: 437 LEVTKVSKAKRVAMMKMLDNGFEDKVKDRRKLKRKTLADKGLLKKRGKRQK 487

[Close]

BLAST of CSPI06G11090 vs. ExPASy Swiss-Prot
Match: Q8L4E9 (DEAD-box ATP-dependent RNA helicase 36 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0633500 PE=3 SV=1)

HSP 1 Score: 524.2 bits (1349), Expect = 1.5e-147
Identity = 278/489 (56.85%), Postives = 349/489 (71.37%), Query Frame = 0


Query: 9   RNFPLFSKPHRKKHKPSE--------NPTAVPNVAPKKSLQ--------------IEKST 68
           R F LFSKP   K KP +         P   PN +P  +++               E + 
Sbjct: 8   RPFLLFSKPKSSKKKPKQEAEPQVHTQPEEPPNPSPSPAIEPDLRDSDEAPAAAVTEHAG 67

Query: 69  ELATKSTNNITFADLGLSEWIIQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGK 128
           + A  +    TFA+LGLS+W++  C  L M+ PTAVQ  CIP+ L G DVLGIA+TGSGK
Sbjct: 68  DDAAAAAVPSTFAELGLSQWLVDVCDSLGMRVPTAVQRRCIPRALEGRDVLGIAETGSGK 127

Query: 129 TAAFALPILQRLSETPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLN 188
           TAAFALPIL RL E P+GV AL + PTRELA QLAEQFRALG+ L LRC   +GG D L 
Sbjct: 128 TAAFALPILHRLGEDPYGVAALALAPTRELAAQLAEQFRALGAPLGLRCLAAIGGFDSLG 187

Query: 189 QTQSLLKRPHIVIATPGRIKVLLEDNPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIF 248
           Q + L +RPH+V+ATPGRI  L+ D+PD+  VF++TKFLVLDEADRVLD+ FEE+L+VIF
Sbjct: 188 QAKGLARRPHVVVATPGRIATLINDDPDLAKVFARTKFLVLDEADRVLDINFEEDLRVIF 247

Query: 249 QCLPRNRQTLLFSATMTKDLETLHKLSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDL 308
             LP+ RQT LFSAT++ +L +L +LS N +YF+EAYEGFKTVD LKQ Y+ +P D K+L
Sbjct: 248 GSLPKKRQTFLFSATISDNLRSLLELSGNNSYFFEAYEGFKTVDTLKQLYIHVPPDAKEL 307

Query: 309 YLLHLLSKMEDMGIRSAIIFVQTCKSCHLLGLLLEALDQEVAALHSVKSQSERLAALYRF 368
           YL +LLSKM +  IRS I+FV TC++C  L  LLE L     +LHS K QS RLAAL+ F
Sbjct: 308 YLFYLLSKMNEDNIRSVIVFVSTCRTCQYLDFLLEELGHPAVSLHSHKPQSRRLAALHNF 367

Query: 369 KSGQVPVLLATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAMSFI-T 428
           KS +VPVLLATDVASRGLDI TVDLVINYD+PR+PRDY+HRVGRTARA RGGL++SFI T
Sbjct: 368 KSSKVPVLLATDVASRGLDIQTVDLVINYDVPRYPRDYIHRVGRTARATRGGLSISFITT 427

Query: 429 QNDVHLIHEIEANLGKQLEIFECKENEVLENITKVYKARHVAKMKMVDGGFEEKVKERKK 475
           Q D+ L+HEIE  +GKQL  ++ +  +V ++ TKV+KAR +A MKM D G E+KV+ RK+
Sbjct: 428 QRDIRLLHEIEDVVGKQLGAYDGEMRDVNKDATKVFKARRLANMKMADEGHEDKVQARKE 487

[Close]

BLAST of CSPI06G11090 vs. ExPASy Swiss-Prot
Match: Q9Y6V7 (Probable ATP-dependent RNA helicase DDX49 OS=Homo sapiens OX=9606 GN=DDX49 PE=1 SV=1)

HSP 1 Score: 397.9 bits (1021), Expect = 1.7e-109
Identity = 223/450 (49.56%), Postives = 301/450 (66.89%), Query Frame = 0


Query: 58  FADLGLSEWIIQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPILQR 117
           FA+LGLS W+++ C++L +K+PT VQ  CIP IL G D LG A+TGSGKTAAF LPILQ+
Sbjct: 4   FAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63

Query: 118 LSETPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLNQTQSLLKRPHI 177
           LSE P+G+F LV+TPTRELAYQ+AEQFR LG  L L+  ++VGGMDM+ Q   L ++PH+
Sbjct: 64  LSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRKPHV 123

Query: 178 VIATPGRIKVLLEDNPDIPVVFSKTKFLVLDEADRVLDVG---FEEELKVIFQCLPRNRQ 237
           VIATPGR+   L  +    +   K +FLV+DEADR+L+ G   F  +L+ I   +P  RQ
Sbjct: 124 VIATPGRLADHLRSSNTFSI--KKIRFLVMDEADRLLEQGCTDFTVDLEAILAAVPARRQ 183

Query: 238 TLLFSATMTKDLETLHKLSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHLLSK 297
           TLLFSAT+T  L  L  L+ N+ +F+EA     TV+ L Q+Y+ +P+ VKD YL+HL+ +
Sbjct: 184 TLLFSATLTDTLRELQGLATNQPFFWEAQAPVSTVEQLDQRYLLVPEKVKDAYLVHLIQR 243

Query: 298 MEDMGIR-SAIIFVQTCKSCHLLGLLLEALDQEVAALHSVKSQSERLAALYRFKSGQVPV 357
            +D     S IIF  TCK+C +L ++L        ALHS+  Q ER AAL +FKS    +
Sbjct: 244 FQDEHEDWSIIIFTNTCKTCQILCMMLRKFSFPTVALHSMMKQKERFAALAKFKSSIYRI 303

Query: 358 LLATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAMSFITQNDVHLIH 417
           L+ATDVASRGLDIPTV +VIN++ P  P+ Y+HRVGRTARAGR G A++ +TQ D+HL+H
Sbjct: 304 LIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVTQYDIHLVH 363

Query: 418 EIEANLGKQLEIFECKENEVLENITKVYKARHVAKMKMVDGGFEEKVKERKKQKR----- 477
            IE  + K+LE F  +E EVL+ +T+V   R   ++K+    F+EK KE  K+K+     
Sbjct: 364 AIEEQIKKKLEEFSVEEAEVLQILTQVNVVRRECEIKLEAAHFDEK-KEINKRKQLILEG 423

Query: 478 -------KTLAEKGLLKKRNKRRRKEKTSE 492
                  K  AE   +K++N RR KEK  E
Sbjct: 424 KDPDLEAKRKAELAKIKQKN-RRFKEKVEE 449

[Close]

BLAST of CSPI06G11090 vs. ExPASy Swiss-Prot
Match: Q4FZF3 (Probable ATP-dependent RNA helicase DDX49 OS=Mus musculus OX=10090 GN=Ddx49 PE=2 SV=1)

HSP 1 Score: 389.8 bits (1000), Expect = 4.5e-107
Identity = 219/450 (48.67%), Postives = 302/450 (67.11%), Query Frame = 0


Query: 58  FADLGLSEWIIQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPILQR 117
           FA++GLS W+++ C++L +K+PT VQ  CIP IL G D LG A+TGSGKTAAF LPILQ+
Sbjct: 4   FAEIGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63

Query: 118 LSETPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLNQTQSLLKRPHI 177
           LSE P+G+F LV+TPTRELAYQ+AEQFR LG  L L+  ++VGGMDM+ Q   L ++PH+
Sbjct: 64  LSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRKPHV 123

Query: 178 VIATPGRIKVLLEDNPDIPVVFSKTKFLVLDEADRVLDVG---FEEELKVIFQCLPRNRQ 237
           VIATPGR+   L  +    +   K +FLV+DEADR+L+ G   F  +L+ I   +P  RQ
Sbjct: 124 VIATPGRLADHLRSSNTFNM--KKIQFLVMDEADRLLEQGCTDFTTDLETILAAVPARRQ 183

Query: 238 TLLFSATMTKDLETLHKLSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHLLSK 297
           TLLFSAT+T  L+ L  L+ N+ +F+EA    +TV+ L Q+Y+ +P+ VKD YL+HL+  
Sbjct: 184 TLLFSATLTDTLKELQGLATNEPFFWEAQATVRTVEQLDQRYLLVPEKVKDAYLVHLVQT 243

Query: 298 MED-MGIRSAIIFVQTCKSCHLLGLLLEALDQEVAALHSVKSQSERLAALYRFKSGQVPV 357
            +D +   S IIF  TCK+C +L ++L   +    ALHS+  Q ER AAL +FKS    +
Sbjct: 244 FQDQLEDCSIIIFTNTCKTCQILCMMLRKFNFPTVALHSMMKQKERFAALAKFKSSIYRI 303

Query: 358 LLATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAMSFITQNDVHLIH 417
           L+ATDVASRGLDIPTV +VIN++ P  P+ Y+HRVGRTARAGR G A++ +TQ D+HL+H
Sbjct: 304 LIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVTQYDIHLLH 363

Query: 418 EIEANLGKQLEIFECKENEVLENITKVYKARHVAKMKMVDGGFEEKVKERKKQKR----- 477
            IE  + +QL     +E EVL+ +T+V   R   ++K+    F+EK KE  K+K+     
Sbjct: 364 AIEEQIKQQLAELVVEEAEVLQILTQVNVVRRECEIKLEASHFDEK-KEINKRKQMILEG 423

Query: 478 -------KTLAEKGLLKKRNKRRRKEKTSE 492
                  K  AE   +K++N RR KEK  +
Sbjct: 424 KDPDLEAKRKAELAKIKQQN-RRFKEKVGQ 449

[Close]

BLAST of CSPI06G11090 vs. ExPASy Swiss-Prot
Match: Q55BR9 (Probable ATP-dependent RNA helicase ddx49 OS=Dictyostelium discoideum OX=44689 GN=ddx49 PE=3 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 4.9e-101
Identity = 207/437 (47.37%), Postives = 292/437 (66.82%), Query Frame = 0


Query: 57  TFADLGLSEWIIQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPILQ 116
           TF +LGL+ W++  CK+L  K P+ +Q + IP+IL G D++  A+TGSGKTA+FA+PIL 
Sbjct: 5   TFEELGLTTWLVANCKQLGFKAPSNIQANTIPEILKGRDIIASAKTGSGKTASFAIPILN 64

Query: 117 RLSETPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLNQTQSLLKRPH 176
           +LSE P+GVFA+++TPTRELA Q+ EQF A+G+ +N+ CSVV+GG+D + Q   L KRPH
Sbjct: 65  QLSEDPYGVFAVILTPTRELAVQIGEQFNAIGAPMNVNCSVVIGGIDNVTQALILDKRPH 124

Query: 177 IVIATPGRIKVLLEDNPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCL--PRNRQ 236
           I++ATPGR+   L +   I + F   KFLVLDEADR+L   FE E+  I + L  P  RQ
Sbjct: 125 IIVATPGRLASHLNNGLKIALKF--CKFLVLDEADRLLGEDFELEIASILEHLPPPEKRQ 184

Query: 237 TLLFSATMTKDLETLHKLSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHLLSK 296
           TLLFSATMTK+L  L  ++ NK + +E    + TVD LKQ+Y+++P   KD YL+++L K
Sbjct: 185 TLLFSATMTKNLTKLDSIALNKPFIFEDNSKYDTVDTLKQEYIYMPAPTKDCYLVYILKK 244

Query: 297 MEDMGIRSAIIFVQTCKSCHLLGLLLEALDQEVAALHSVKSQSERLAALYRFKSGQVPVL 356
            E     SAI+FV  C +   +  +L  LD    +LHS   Q  RLAAL  FKSG+V VL
Sbjct: 245 HEG---SSAIVFVNNCYAVEAVKGMLNKLDIPSVSLHSFLDQKSRLAALKTFKSGKVKVL 304

Query: 357 LATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAMSFITQNDVHLIHE 416
           +ATDVASRGLDIP V +VINY +    +DY+HRVGRTAR GR G A+SFIT +DV LI  
Sbjct: 305 VATDVASRGLDIPDVQIVINYKLSNSSKDYIHRVGRTARFGRSGRAISFITPHDVSLIKG 364

Query: 417 IEANLGKQLEIFECKENEVLENITKVYKARHVAKMKMVDGGFEEKVKERKKQKRKTLAEK 476
           IE  + KQLE+++  ++EV  ++ +   AR + ++ + +  F  K KER+ ++ +   +K
Sbjct: 365 IEEIIKKQLELYKTDDDEVFRHLKEASTARKIVEIHLDEIEFGVKQKERRTERNE--LQK 424

Query: 477 GLLKKRNKRRRKEKTSE 492
            L +  NK + +   ++
Sbjct: 425 QLKEVNNKEKFENNNND 434

[Close]

BLAST of CSPI06G11090 vs. ExPASy TrEMBL
Match: A0A0A0KD72 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G136530 PE=3 SV=1)

HSP 1 Score: 940.3 bits (2429), Expect = 3.3e-270
Identity = 488/491 (99.39%), Postives = 490/491 (99.80%), Query Frame = 0


Query: 1   MDQEVIVDRNFPLFSKPHRKKHKPSENPTAVPNVAPKKSLQIEKSTELATKSTNNITFAD 60
           MDQEVIVDRNFPLFSKPHRKKHKPSENPTAVPNVAPKKSLQIEKSTEL TKSTNNITFAD
Sbjct: 1   MDQEVIVDRNFPLFSKPHRKKHKPSENPTAVPNVAPKKSLQIEKSTELTTKSTNNITFAD 60

Query: 61  LGLSEWIIQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPILQRLSE 120
           LGLSEWIIQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPILQRLSE
Sbjct: 61  LGLSEWIIQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPILQRLSE 120

Query: 121 TPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLNQTQSLLKRPHIVIA 180
           TPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLNQTQSLLKRPHIVIA
Sbjct: 121 TPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLNQTQSLLKRPHIVIA 180

Query: 181 TPGRIKVLLEDNPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNRQTLLFSA 240
           TPGRIKVLLEDNPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNRQTLLFSA
Sbjct: 181 TPGRIKVLLEDNPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNRQTLLFSA 240

Query: 241 TMTKDLETLHKLSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHLLSKMEDMGI 300
           TMTKDLETLHKLSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHLLSKMEDMGI
Sbjct: 241 TMTKDLETLHKLSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHLLSKMEDMGI 300

Query: 301 RSAIIFVQTCKSCHLLGLLLEALDQEVAALHSVKSQSERLAALYRFKSGQVPVLLATDVA 360
           RSAIIFVQTCKSCHLLGLLLEALDQEVAALHSVKSQSERLAALYRFKSG+VPVLLATDVA
Sbjct: 301 RSAIIFVQTCKSCHLLGLLLEALDQEVAALHSVKSQSERLAALYRFKSGRVPVLLATDVA 360

Query: 361 SRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAMSFITQNDVHLIHEIEANLG 420
           SRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLA+SFITQNDVHLIHEIEANLG
Sbjct: 361 SRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQNDVHLIHEIEANLG 420

Query: 421 KQLEIFECKENEVLENITKVYKARHVAKMKMVDGGFEEKVKERKKQKRKTLAEKGLLKKR 480
           KQLEIFECKENEVLENITKVYKARHVAKMKMVDGGFEEKVKERKKQKRKTLAEKGLLKKR
Sbjct: 421 KQLEIFECKENEVLENITKVYKARHVAKMKMVDGGFEEKVKERKKQKRKTLAEKGLLKKR 480

Query: 481 NKRRRKEKTSE 492
           NKRRRKEKTSE
Sbjct: 481 NKRRRKEKTSE 491

[Close]

BLAST of CSPI06G11090 vs. ExPASy TrEMBL
Match: A0A5D3CBL8 (DEAD-box ATP-dependent RNA helicase 36 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3734G00060 PE=3 SV=1)

HSP 1 Score: 907.5 bits (2344), Expect = 2.4e-260
Identity = 472/492 (95.93%), Postives = 482/492 (97.97%), Query Frame = 0


Query: 1   MDQEVIVDRNFPLFSKPHRKKHKPSENPT-AVPNVAPKKSLQIEKSTELATKSTNNITFA 60
           MDQEVIVD NFPLFSKPHRKKHKPSENPT AV N+APK SLQIEKSTEL TKSTNN+TF+
Sbjct: 1   MDQEVIVDANFPLFSKPHRKKHKPSENPTAAVENIAPKSSLQIEKSTELTTKSTNNVTFS 60

Query: 61  DLGLSEWIIQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPILQRLS 120
           DLGLSEWI+QTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPILQRLS
Sbjct: 61  DLGLSEWIVQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPILQRLS 120

Query: 121 ETPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLNQTQSLLKRPHIVI 180
           ETPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDML+QTQSLLKRPHIVI
Sbjct: 121 ETPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLSQTQSLLKRPHIVI 180

Query: 181 ATPGRIKVLLEDNPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNRQTLLFS 240
           ATPGR+KVLLE+NPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNRQTLLFS
Sbjct: 181 ATPGRVKVLLEENPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNRQTLLFS 240

Query: 241 ATMTKDLETLHKLSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHLLSKMEDMG 300
           ATMTKDLETL +LSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLH+LSKMEDMG
Sbjct: 241 ATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHILSKMEDMG 300

Query: 301 IRSAIIFVQTCKSCHLLGLLLEALDQEVAALHSVKSQSERLAALYRFKSGQVPVLLATDV 360
           IRSAIIFVQTCKSCHLLGLLLEALDQEVAALHS KSQSERLAALYRFKSGQVPVLLATDV
Sbjct: 301 IRSAIIFVQTCKSCHLLGLLLEALDQEVAALHSFKSQSERLAALYRFKSGQVPVLLATDV 360

Query: 361 ASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAMSFITQNDVHLIHEIEANL 420
           ASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLA+SFITQNDVHLIHEIEANL
Sbjct: 361 ASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQNDVHLIHEIEANL 420

Query: 421 GKQLEIFECKENEVLENITKVYKARHVAKMKMVDGGFEEKVKERKKQKRKTLAEKGLLKK 480
           GKQLEIFECKENEVLENITKVYKARHVAKMKMVD GFEEKVKERKKQK KTLAEKGLLKK
Sbjct: 421 GKQLEIFECKENEVLENITKVYKARHVAKMKMVDDGFEEKVKERKKQKLKTLAEKGLLKK 480

Query: 481 RNKRRRKEKTSE 492
           RNKRRRKEKT E
Sbjct: 481 RNKRRRKEKTFE 492

[Close]

BLAST of CSPI06G11090 vs. ExPASy TrEMBL
Match: A0A1S3C309 (DEAD-box ATP-dependent RNA helicase 36 OS=Cucumis melo OX=3656 GN=LOC103496288 PE=3 SV=1)

HSP 1 Score: 907.5 bits (2344), Expect = 2.4e-260
Identity = 472/492 (95.93%), Postives = 482/492 (97.97%), Query Frame = 0


Query: 1   MDQEVIVDRNFPLFSKPHRKKHKPSENPT-AVPNVAPKKSLQIEKSTELATKSTNNITFA 60
           MDQEVIVD NFPLFSKPHRKKHKPSENPT AV N+APK SLQIEKSTEL TKSTNN+TF+
Sbjct: 1   MDQEVIVDANFPLFSKPHRKKHKPSENPTAAVENIAPKSSLQIEKSTELTTKSTNNVTFS 60

Query: 61  DLGLSEWIIQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPILQRLS 120
           DLGLSEWI+QTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPILQRLS
Sbjct: 61  DLGLSEWIVQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPILQRLS 120

Query: 121 ETPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLNQTQSLLKRPHIVI 180
           ETPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDML+QTQSLLKRPHIVI
Sbjct: 121 ETPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLSQTQSLLKRPHIVI 180

Query: 181 ATPGRIKVLLEDNPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNRQTLLFS 240
           ATPGR+KVLLE+NPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNRQTLLFS
Sbjct: 181 ATPGRVKVLLEENPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNRQTLLFS 240

Query: 241 ATMTKDLETLHKLSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHLLSKMEDMG 300
           ATMTKDLETL +LSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLH+LSKMEDMG
Sbjct: 241 ATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHILSKMEDMG 300

Query: 301 IRSAIIFVQTCKSCHLLGLLLEALDQEVAALHSVKSQSERLAALYRFKSGQVPVLLATDV 360
           IRSAIIFVQTCKSCHLLGLLLEALDQEVAALHS KSQSERLAALYRFKSGQVPVLLATDV
Sbjct: 301 IRSAIIFVQTCKSCHLLGLLLEALDQEVAALHSFKSQSERLAALYRFKSGQVPVLLATDV 360

Query: 361 ASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAMSFITQNDVHLIHEIEANL 420
           ASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLA+SFITQNDVHLIHEIEANL
Sbjct: 361 ASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQNDVHLIHEIEANL 420

Query: 421 GKQLEIFECKENEVLENITKVYKARHVAKMKMVDGGFEEKVKERKKQKRKTLAEKGLLKK 480
           GKQLEIFECKENEVLENITKVYKARHVAKMKMVD GFEEKVKERKKQK KTLAEKGLLKK
Sbjct: 421 GKQLEIFECKENEVLENITKVYKARHVAKMKMVDDGFEEKVKERKKQKLKTLAEKGLLKK 480

Query: 481 RNKRRRKEKTSE 492
           RNKRRRKEKT E
Sbjct: 481 RNKRRRKEKTFE 492

[Close]

BLAST of CSPI06G11090 vs. ExPASy TrEMBL
Match: A0A6J1D9D5 (DEAD-box ATP-dependent RNA helicase 36 OS=Momordica charantia OX=3673 GN=LOC111018118 PE=3 SV=1)

HSP 1 Score: 844.0 bits (2179), Expect = 3.3e-241
Identity = 439/498 (88.15%), Postives = 469/498 (94.18%), Query Frame = 0


Query: 1   MDQEVIVDRNFPLFSKPHRKKHKPSENPTAVP------NVAPKKSLQIEKSTELATKSTN 60
           MD+EV VD NFPLF+K HRKKHKPS+NPT  P       +A KK LQ+EKST+LAT STN
Sbjct: 1   MDEEVTVDENFPLFAKSHRKKHKPSQNPTGGPVSTIVETIASKKPLQVEKSTDLATTSTN 60

Query: 61  NITFADLGLSEWIIQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPI 120
           N+TFADLGLSEWI++TCKEL M+KPTAVQTHCIPKILAGLDVLG+AQTGSGKTAAFALPI
Sbjct: 61  NVTFADLGLSEWIVRTCKELAMRKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPI 120

Query: 121 LQRLSETPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLNQTQSLLKR 180
           LQRLSETPFGVFALVVTPTRELAYQLAEQFRALGS L+LRCSVVVGGMDMLNQ QSLLKR
Sbjct: 121 LQRLSETPFGVFALVVTPTRELAYQLAEQFRALGSSLHLRCSVVVGGMDMLNQAQSLLKR 180

Query: 181 PHIVIATPGRIKVLLEDNPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNRQ 240
           PHIVIATPGR+KVLLE+NPDIP+VFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNRQ
Sbjct: 181 PHIVIATPGRVKVLLEENPDIPLVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNRQ 240

Query: 241 TLLFSATMTKDLETLHKLSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHLLSK 300
           TLLFSATMTKDLETL +LSANKAYFYEAYEGFKTV+MLKQQYVFIPK+VKD+YLLH+LSK
Sbjct: 241 TLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVEMLKQQYVFIPKNVKDVYLLHILSK 300

Query: 301 MEDMGIRSAIIFVQTCKSCHLLGLLLEALDQEVAALHSVKSQSERLAALYRFKSGQVPVL 360
           MEDMGIRSAIIFVQTC+SCHLLGLLLE LDQEVAALHS KSQS+RLAALYRFKSGQVPVL
Sbjct: 301 MEDMGIRSAIIFVQTCRSCHLLGLLLEELDQEVAALHSFKSQSQRLAALYRFKSGQVPVL 360

Query: 361 LATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAMSFITQNDVHLIHE 420
           LATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLA+SFITQNDV LIHE
Sbjct: 361 LATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQNDVELIHE 420

Query: 421 IEANLGKQLEIFECKENEVLENITKVYKARHVAKMKMVDGGFEEKVKERKKQKRKTLAEK 480
           IEA +GKQLE FECKENEVLENITKVYKAR VA MKMVD GFEEKVKERKKQK+KTLAEK
Sbjct: 421 IEAVVGKQLENFECKENEVLENITKVYKARRVAAMKMVDDGFEEKVKERKKQKQKTLAEK 480

Query: 481 GLLKKRNK-RRRKEKTSE 492
           GLLKK+ + ++R+EKTSE
Sbjct: 481 GLLKKKKRSKKRREKTSE 498

[Close]

BLAST of CSPI06G11090 vs. ExPASy TrEMBL
Match: A0A6J1L281 (DEAD-box ATP-dependent RNA helicase 36 OS=Cucurbita maxima OX=3661 GN=LOC111499736 PE=3 SV=1)

HSP 1 Score: 839.7 bits (2168), Expect = 6.1e-240
Identity = 437/492 (88.82%), Postives = 464/492 (94.31%), Query Frame = 0


Query: 1   MDQEVIVDRNFPLFSKPHRKKHKPS-ENPTAVPNVAPKKSLQIEKSTELATKSTNNITFA 60
           MDQEV VD NFPLFSK HRK HKPS +NPTAV N A K  +QIEKSTEL TKST N+TFA
Sbjct: 1   MDQEVTVDENFPLFSKSHRKTHKPSLKNPTAVDNTAQKAPIQIEKSTELTTKST-NVTFA 60

Query: 61  DLGLSEWIIQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPILQRLS 120
           DLGLSEWI+QTCKEL MKKPTAVQTHCIPKILAGLDVLG+AQTGSGKTAAFALPILQ+LS
Sbjct: 61  DLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPILQQLS 120

Query: 121 ETPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLNQTQSLLKRPHIVI 180
           ETPFGVFALVVTPTRELAYQLAEQFRALGS LNLRCSVVVGGMDMLNQTQSLLKRPHIVI
Sbjct: 121 ETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLKRPHIVI 180

Query: 181 ATPGRIKVLLEDNPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNRQTLLFS 240
           ATPGR+KVLLE+NPDIP VFSKTKFLVLDEADRVLDVGFEEELKVIF+CLPRNRQTLLFS
Sbjct: 181 ATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRNRQTLLFS 240

Query: 241 ATMTKDLETLHKLSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHLLSKMEDMG 300
           ATMTKDLETL +LSANKAYFYEAYEGFKTVDMLKQQY+F+PK+VKD+YLLH++SKM+DMG
Sbjct: 241 ATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYIFLPKNVKDVYLLHIMSKMKDMG 300

Query: 301 IRSAIIFVQTCKSCHLLGLLLEALDQEVAALHSVKSQSERLAALYRFKSGQVPVLLATDV 360
           +RSAIIFV TCKSCH LGLLLE LDQ+VAALHS KSQSERLAALYRFKSGQ PVLLATDV
Sbjct: 301 VRSAIIFVHTCKSCHHLGLLLEELDQDVAALHSFKSQSERLAALYRFKSGQAPVLLATDV 360

Query: 361 ASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAMSFITQNDVHLIHEIEANL 420
           ASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGR GLA+SFITQNDV LIHEIEANL
Sbjct: 361 ASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRHGLAVSFITQNDVELIHEIEANL 420

Query: 421 GKQLEIFECKENEVLENITKVYKARHVAKMKMVDGGFEEKVKERKKQKRKTLAEKGLLKK 480
           GK+LEIFECKENEVLEN+TKVYKAR VA MKMVD GFEEKVKERKKQK KTLAEKGLLKK
Sbjct: 421 GKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFKTLAEKGLLKK 480

Query: 481 RNKRRRKEKTSE 492
           R+++RR+EK S+
Sbjct: 481 RSRKRRREKGSK 491

[Close]

BLAST of CSPI06G11090 vs. NCBI nr
Match: XP_004139902.1 (DEAD-box ATP-dependent RNA helicase 36 [Cucumis sativus] >KGN46799.1 hypothetical protein Csa_020949 [Cucumis sativus])

HSP 1 Score: 940.3 bits (2429), Expect = 6.9e-270
Identity = 488/491 (99.39%), Postives = 490/491 (99.80%), Query Frame = 0


Query: 1   MDQEVIVDRNFPLFSKPHRKKHKPSENPTAVPNVAPKKSLQIEKSTELATKSTNNITFAD 60
           MDQEVIVDRNFPLFSKPHRKKHKPSENPTAVPNVAPKKSLQIEKSTEL TKSTNNITFAD
Sbjct: 1   MDQEVIVDRNFPLFSKPHRKKHKPSENPTAVPNVAPKKSLQIEKSTELTTKSTNNITFAD 60

Query: 61  LGLSEWIIQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPILQRLSE 120
           LGLSEWIIQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPILQRLSE
Sbjct: 61  LGLSEWIIQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPILQRLSE 120

Query: 121 TPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLNQTQSLLKRPHIVIA 180
           TPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLNQTQSLLKRPHIVIA
Sbjct: 121 TPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLNQTQSLLKRPHIVIA 180

Query: 181 TPGRIKVLLEDNPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNRQTLLFSA 240
           TPGRIKVLLEDNPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNRQTLLFSA
Sbjct: 181 TPGRIKVLLEDNPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNRQTLLFSA 240

Query: 241 TMTKDLETLHKLSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHLLSKMEDMGI 300
           TMTKDLETLHKLSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHLLSKMEDMGI
Sbjct: 241 TMTKDLETLHKLSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHLLSKMEDMGI 300

Query: 301 RSAIIFVQTCKSCHLLGLLLEALDQEVAALHSVKSQSERLAALYRFKSGQVPVLLATDVA 360
           RSAIIFVQTCKSCHLLGLLLEALDQEVAALHSVKSQSERLAALYRFKSG+VPVLLATDVA
Sbjct: 301 RSAIIFVQTCKSCHLLGLLLEALDQEVAALHSVKSQSERLAALYRFKSGRVPVLLATDVA 360

Query: 361 SRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAMSFITQNDVHLIHEIEANLG 420
           SRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLA+SFITQNDVHLIHEIEANLG
Sbjct: 361 SRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQNDVHLIHEIEANLG 420

Query: 421 KQLEIFECKENEVLENITKVYKARHVAKMKMVDGGFEEKVKERKKQKRKTLAEKGLLKKR 480
           KQLEIFECKENEVLENITKVYKARHVAKMKMVDGGFEEKVKERKKQKRKTLAEKGLLKKR
Sbjct: 421 KQLEIFECKENEVLENITKVYKARHVAKMKMVDGGFEEKVKERKKQKRKTLAEKGLLKKR 480

Query: 481 NKRRRKEKTSE 492
           NKRRRKEKTSE
Sbjct: 481 NKRRRKEKTSE 491

[Close]

BLAST of CSPI06G11090 vs. NCBI nr
Match: XP_008456302.1 (PREDICTED: DEAD-box ATP-dependent RNA helicase 36 [Cucumis melo] >KAA0054684.1 DEAD-box ATP-dependent RNA helicase 36 [Cucumis melo var. makuwa] >TYK08588.1 DEAD-box ATP-dependent RNA helicase 36 [Cucumis melo var. makuwa])

HSP 1 Score: 907.5 bits (2344), Expect = 4.9e-260
Identity = 472/492 (95.93%), Postives = 482/492 (97.97%), Query Frame = 0


Query: 1   MDQEVIVDRNFPLFSKPHRKKHKPSENPT-AVPNVAPKKSLQIEKSTELATKSTNNITFA 60
           MDQEVIVD NFPLFSKPHRKKHKPSENPT AV N+APK SLQIEKSTEL TKSTNN+TF+
Sbjct: 1   MDQEVIVDANFPLFSKPHRKKHKPSENPTAAVENIAPKSSLQIEKSTELTTKSTNNVTFS 60

Query: 61  DLGLSEWIIQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPILQRLS 120
           DLGLSEWI+QTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPILQRLS
Sbjct: 61  DLGLSEWIVQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPILQRLS 120

Query: 121 ETPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLNQTQSLLKRPHIVI 180
           ETPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDML+QTQSLLKRPHIVI
Sbjct: 121 ETPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLSQTQSLLKRPHIVI 180

Query: 181 ATPGRIKVLLEDNPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNRQTLLFS 240
           ATPGR+KVLLE+NPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNRQTLLFS
Sbjct: 181 ATPGRVKVLLEENPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNRQTLLFS 240

Query: 241 ATMTKDLETLHKLSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHLLSKMEDMG 300
           ATMTKDLETL +LSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLH+LSKMEDMG
Sbjct: 241 ATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHILSKMEDMG 300

Query: 301 IRSAIIFVQTCKSCHLLGLLLEALDQEVAALHSVKSQSERLAALYRFKSGQVPVLLATDV 360
           IRSAIIFVQTCKSCHLLGLLLEALDQEVAALHS KSQSERLAALYRFKSGQVPVLLATDV
Sbjct: 301 IRSAIIFVQTCKSCHLLGLLLEALDQEVAALHSFKSQSERLAALYRFKSGQVPVLLATDV 360

Query: 361 ASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAMSFITQNDVHLIHEIEANL 420
           ASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLA+SFITQNDVHLIHEIEANL
Sbjct: 361 ASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQNDVHLIHEIEANL 420

Query: 421 GKQLEIFECKENEVLENITKVYKARHVAKMKMVDGGFEEKVKERKKQKRKTLAEKGLLKK 480
           GKQLEIFECKENEVLENITKVYKARHVAKMKMVD GFEEKVKERKKQK KTLAEKGLLKK
Sbjct: 421 GKQLEIFECKENEVLENITKVYKARHVAKMKMVDDGFEEKVKERKKQKLKTLAEKGLLKK 480

Query: 481 RNKRRRKEKTSE 492
           RNKRRRKEKT E
Sbjct: 481 RNKRRRKEKTFE 492

[Close]

BLAST of CSPI06G11090 vs. NCBI nr
Match: XP_038900331.1 (DEAD-box ATP-dependent RNA helicase 36 [Benincasa hispida])

HSP 1 Score: 891.3 bits (2302), Expect = 3.7e-255
Identity = 465/497 (93.56%), Postives = 480/497 (96.58%), Query Frame = 0


Query: 1   MDQEVIVDRNFPLFSKPHRKKHKPSENPT------AVPNVAPKKSLQIEKSTELATKSTN 60
           MD+EVI+D NFPLFSK HRKKHKPSENPT      AV N APKKSLQIEKSTEL+TKSTN
Sbjct: 1   MDREVIIDENFPLFSKSHRKKHKPSENPTGAPISPAVENNAPKKSLQIEKSTELSTKSTN 60

Query: 61  NITFADLGLSEWIIQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPI 120
           N+TFADLGLSEWI+QTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPI
Sbjct: 61  NVTFADLGLSEWIVQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPI 120

Query: 121 LQRLSETPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLNQTQSLLKR 180
           LQRLSETPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDML+QTQSLLKR
Sbjct: 121 LQRLSETPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLSQTQSLLKR 180

Query: 181 PHIVIATPGRIKVLLEDNPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNRQ 240
           PHIVIATPGR+KVLLE+NPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLP +RQ
Sbjct: 181 PHIVIATPGRVKVLLEENPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPHSRQ 240

Query: 241 TLLFSATMTKDLETLHKLSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHLLSK 300
           TLLFSATMTKDLETL +LSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLH+LSK
Sbjct: 241 TLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHILSK 300

Query: 301 MEDMGIRSAIIFVQTCKSCHLLGLLLEALDQEVAALHSVKSQSERLAALYRFKSGQVPVL 360
           MEDMGIRSAIIFVQTCKSCH+LGLLLEALDQEVAALHS KSQSERLAALYRFKSGQVPVL
Sbjct: 301 MEDMGIRSAIIFVQTCKSCHMLGLLLEALDQEVAALHSFKSQSERLAALYRFKSGQVPVL 360

Query: 361 LATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAMSFITQNDVHLIHE 420
           LATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLA+SFITQNDV LIHE
Sbjct: 361 LATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQNDVQLIHE 420

Query: 421 IEANLGKQLEIFECKENEVLENITKVYKARHVAKMKMVDGGFEEKVKERKKQKRKTLAEK 480
           IEANLGKQLE FECKENEVLENITKVYKARHVAKMKMVD GFEEKVKERKKQK KTLAEK
Sbjct: 421 IEANLGKQLENFECKENEVLENITKVYKARHVAKMKMVDDGFEEKVKERKKQKLKTLAEK 480

Query: 481 GLLKKRNKRRRKEKTSE 492
           GLLKKRNKR+RKEKTS+
Sbjct: 481 GLLKKRNKRKRKEKTSK 497

[Close]

BLAST of CSPI06G11090 vs. NCBI nr
Match: XP_022149766.1 (DEAD-box ATP-dependent RNA helicase 36 [Momordica charantia])

HSP 1 Score: 844.0 bits (2179), Expect = 6.7e-241
Identity = 439/498 (88.15%), Postives = 469/498 (94.18%), Query Frame = 0


Query: 1   MDQEVIVDRNFPLFSKPHRKKHKPSENPTAVP------NVAPKKSLQIEKSTELATKSTN 60
           MD+EV VD NFPLF+K HRKKHKPS+NPT  P       +A KK LQ+EKST+LAT STN
Sbjct: 1   MDEEVTVDENFPLFAKSHRKKHKPSQNPTGGPVSTIVETIASKKPLQVEKSTDLATTSTN 60

Query: 61  NITFADLGLSEWIIQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPI 120
           N+TFADLGLSEWI++TCKEL M+KPTAVQTHCIPKILAGLDVLG+AQTGSGKTAAFALPI
Sbjct: 61  NVTFADLGLSEWIVRTCKELAMRKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPI 120

Query: 121 LQRLSETPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLNQTQSLLKR 180
           LQRLSETPFGVFALVVTPTRELAYQLAEQFRALGS L+LRCSVVVGGMDMLNQ QSLLKR
Sbjct: 121 LQRLSETPFGVFALVVTPTRELAYQLAEQFRALGSSLHLRCSVVVGGMDMLNQAQSLLKR 180

Query: 181 PHIVIATPGRIKVLLEDNPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNRQ 240
           PHIVIATPGR+KVLLE+NPDIP+VFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNRQ
Sbjct: 181 PHIVIATPGRVKVLLEENPDIPLVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNRQ 240

Query: 241 TLLFSATMTKDLETLHKLSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHLLSK 300
           TLLFSATMTKDLETL +LSANKAYFYEAYEGFKTV+MLKQQYVFIPK+VKD+YLLH+LSK
Sbjct: 241 TLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVEMLKQQYVFIPKNVKDVYLLHILSK 300

Query: 301 MEDMGIRSAIIFVQTCKSCHLLGLLLEALDQEVAALHSVKSQSERLAALYRFKSGQVPVL 360
           MEDMGIRSAIIFVQTC+SCHLLGLLLE LDQEVAALHS KSQS+RLAALYRFKSGQVPVL
Sbjct: 301 MEDMGIRSAIIFVQTCRSCHLLGLLLEELDQEVAALHSFKSQSQRLAALYRFKSGQVPVL 360

Query: 361 LATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAMSFITQNDVHLIHE 420
           LATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLA+SFITQNDV LIHE
Sbjct: 361 LATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQNDVELIHE 420

Query: 421 IEANLGKQLEIFECKENEVLENITKVYKARHVAKMKMVDGGFEEKVKERKKQKRKTLAEK 480
           IEA +GKQLE FECKENEVLENITKVYKAR VA MKMVD GFEEKVKERKKQK+KTLAEK
Sbjct: 421 IEAVVGKQLENFECKENEVLENITKVYKARRVAAMKMVDDGFEEKVKERKKQKQKTLAEK 480

Query: 481 GLLKKRNK-RRRKEKTSE 492
           GLLKK+ + ++R+EKTSE
Sbjct: 481 GLLKKKKRSKKRREKTSE 498

[Close]

BLAST of CSPI06G11090 vs. NCBI nr
Match: XP_023007160.1 (DEAD-box ATP-dependent RNA helicase 36 [Cucurbita maxima])

HSP 1 Score: 839.7 bits (2168), Expect = 1.3e-239
Identity = 437/492 (88.82%), Postives = 464/492 (94.31%), Query Frame = 0


Query: 1   MDQEVIVDRNFPLFSKPHRKKHKPS-ENPTAVPNVAPKKSLQIEKSTELATKSTNNITFA 60
           MDQEV VD NFPLFSK HRK HKPS +NPTAV N A K  +QIEKSTEL TKST N+TFA
Sbjct: 1   MDQEVTVDENFPLFSKSHRKTHKPSLKNPTAVDNTAQKAPIQIEKSTELTTKST-NVTFA 60

Query: 61  DLGLSEWIIQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPILQRLS 120
           DLGLSEWI+QTCKEL MKKPTAVQTHCIPKILAGLDVLG+AQTGSGKTAAFALPILQ+LS
Sbjct: 61  DLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPILQQLS 120

Query: 121 ETPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLNQTQSLLKRPHIVI 180
           ETPFGVFALVVTPTRELAYQLAEQFRALGS LNLRCSVVVGGMDMLNQTQSLLKRPHIVI
Sbjct: 121 ETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLKRPHIVI 180

Query: 181 ATPGRIKVLLEDNPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNRQTLLFS 240
           ATPGR+KVLLE+NPDIP VFSKTKFLVLDEADRVLDVGFEEELKVIF+CLPRNRQTLLFS
Sbjct: 181 ATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRNRQTLLFS 240

Query: 241 ATMTKDLETLHKLSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHLLSKMEDMG 300
           ATMTKDLETL +LSANKAYFYEAYEGFKTVDMLKQQY+F+PK+VKD+YLLH++SKM+DMG
Sbjct: 241 ATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYIFLPKNVKDVYLLHIMSKMKDMG 300

Query: 301 IRSAIIFVQTCKSCHLLGLLLEALDQEVAALHSVKSQSERLAALYRFKSGQVPVLLATDV 360
           +RSAIIFV TCKSCH LGLLLE LDQ+VAALHS KSQSERLAALYRFKSGQ PVLLATDV
Sbjct: 301 VRSAIIFVHTCKSCHHLGLLLEELDQDVAALHSFKSQSERLAALYRFKSGQAPVLLATDV 360

Query: 361 ASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAMSFITQNDVHLIHEIEANL 420
           ASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGR GLA+SFITQNDV LIHEIEANL
Sbjct: 361 ASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRHGLAVSFITQNDVELIHEIEANL 420

Query: 421 GKQLEIFECKENEVLENITKVYKARHVAKMKMVDGGFEEKVKERKKQKRKTLAEKGLLKK 480
           GK+LEIFECKENEVLEN+TKVYKAR VA MKMVD GFEEKVKERKKQK KTLAEKGLLKK
Sbjct: 421 GKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFKTLAEKGLLKK 480

Query: 481 RNKRRRKEKTSE 492
           R+++RR+EK S+
Sbjct: 481 RSRKRRREKGSK 491

[Close]

BLAST of CSPI06G11090 vs. TAIR 10
Match: AT1G16280.1 (RNA helicase 36 )

HSP 1 Score: 620.2 bits (1598), Expect = 1.5e-177
Identity = 323/471 (68.58%), Postives = 389/471 (82.59%), Query Frame = 0


Query: 23  KPSENPTAVPNVAPKK------SLQIEKST--ELATKSTNNITFADLGLSEWIIQTCKEL 82
           K  +NP  V N+  +K      + Q EK T    ++ +T+   F  LGL+EW ++TCKEL
Sbjct: 17  KSRKNPKTVVNIQSQKLDSDQNTPQFEKFTNPNPSSDTTSATNFEGLGLAEWAVETCKEL 76

Query: 83  VMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPILQRLSETPFGVFALVVTPTR 142
            M+KPT VQTHC+PKILAG DVLG+AQTGSGKTAAFALPIL RL+E P+GVFALVVTPTR
Sbjct: 77  GMRKPTPVQTHCVPKILAGRDVLGLAQTGSGKTAAFALPILHRLAEDPYGVFALVVTPTR 136

Query: 143 ELAYQLAEQFRALGSCLNLRCSVVVGGMDMLNQTQSLLKRPHIVIATPGRIKVLLEDNPD 202
           ELA+QLAEQF+ALGSCLNLRCSV+VGGMDML QT SL+ RPHIVI TPGRIKVLLE+NPD
Sbjct: 137 ELAFQLAEQFKALGSCLNLRCSVIVGGMDMLTQTMSLVSRPHIVITTPGRIKVLLENNPD 196

Query: 203 IPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNRQTLLFSATMTKDLETLHKLSA 262
           +P VFS+TKFLVLDEADRVLDVGF++EL+ IFQCLP++RQTLLFSATMT +L+ L + S+
Sbjct: 197 VPPVFSRTKFLVLDEADRVLDVGFQDELRTIFQCLPKSRQTLLFSATMTSNLQALLEHSS 256

Query: 263 NKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHLLSKMEDMGIRSAIIFVQTCKSCH 322
           NKAYFYEAYEG KTVD L QQ++F  KD K+LYL+H+LS+MED GIRSA+IFV TC++C 
Sbjct: 257 NKAYFYEAYEGLKTVDTLTQQFIFEDKDAKELYLVHILSQMEDKGIRSAMIFVSTCRTCQ 316

Query: 323 LLGLLLEALDQEVAALHSVKSQSERLAALYRFKSGQVPVLLATDVASRGLDIPTVDLVIN 382
            L L+L+ L+ E  A+HS+ SQS RL+AL +FKSG+VP+LLATDVASRGLDIPTVDLVIN
Sbjct: 317 RLSLMLDELEVENIAMHSLNSQSMRLSALSKFKSGKVPILLATDVASRGLDIPTVDLVIN 376

Query: 383 YDIPRFPRDYVHRVGRTARAGRGGLAMSFITQNDVHLIHEIEANLGKQLEIFECKENEVL 442
           YDIPR PRDYVHRVGRTARAGRGGLA+S IT+ DV LIH+IE  +GK++E +  K     
Sbjct: 377 YDIPRDPRDYVHRVGRTARAGRGGLAVSIITETDVKLIHKIEEEVGKKMEPYNKKVITDS 436

Query: 443 ENITKVYKARHVAKMKMVDGGFEEKVKERKKQKRKTLAEKGLLKKRNKRRR 486
             +TKV KA+ VA MKM+D GFE+KVK+R+K KRKTLA+KGLLKKR KR++
Sbjct: 437 LEVTKVSKAKRVAMMKMLDNGFEDKVKDRRKLKRKTLADKGLLKKRGKRQK 487

[Close]

BLAST of CSPI06G11090 vs. TAIR 10
Match: AT5G60990.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 333.6 bits (854), Expect = 2.7e-91
Identity = 193/448 (43.08%), Postives = 282/448 (62.95%), Query Frame = 0


Query: 57  TFADLGLSEWIIQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPILQ 116
           TFA+LG+ E +++ C+ L  K P+ +Q   +P  L G DV+G+AQTGSGKT AFA+PILQ
Sbjct: 10  TFAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGAFAIPILQ 69

Query: 117 RLSETPF------------GVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDM 176
            L E  +              FA V++PTRELA Q+AEQF ALG+ ++LRC+V+VGG+D 
Sbjct: 70  ALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRCAVLVGGIDR 129

Query: 177 LNQTQSLLKRPHIVIATPGRIKVLLEDNPDIPVVFSKTKFLVLDEADRVLDVGFEEELKV 236
           + QT +L KRPH+++ATPGR+   + D     +     K+LVLDEADR+L+  FE+ L  
Sbjct: 130 MQQTIALGKRPHVIVATPGRLWDHMSDTKGFSL--KSLKYLVLDEADRLLNEDFEKSLNQ 189

Query: 237 IFQCLPRNRQTLLFSATMTKDLETLHKLSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVK 296
           I + +P  R+T LFSATMTK +  L +         EA   + TVD LKQQY F+    K
Sbjct: 190 ILEEIPLERKTFLFSATMTKKVRKLQRACLRNPVKIEAASKYSTVDTLKQQYRFVAAKYK 249

Query: 297 DLYLLHLLSKMEDMGIRSAIIFVQTCKSCHLLGLLLEALDQEVAALHSVKSQSERLAALY 356
           D YL+++LS+M +    +++IF +TC     L L+L +L      +    +QS+RL AL 
Sbjct: 250 DCYLVYILSEMPE---STSMIFTRTCDGTRFLALVLRSLGFRAIPISGQMTQSKRLGALN 309

Query: 357 RFKSGQVPVLLATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAMSFI 416
           +FK+G+  +L+ TDVASRGLDIP+VD+VINYDIP   +DY+HRVGRTARAGR G+ +S +
Sbjct: 310 KFKAGECNILVCTDVASRGLDIPSVDVVINYDIPTNSKDYIHRVGRTARAGRSGVGISLV 369

Query: 417 TQNDVHLIHEIEANLGKQLEIFECKENEVLENITKVYKARHVAKMKMVDGGFEEKVKERK 476
            Q ++    +IE  +GK+L  +  +E+EVL  + +V +A+ ++ M M + G  ++  E  
Sbjct: 370 NQYELEWYIQIEKLIGKKLPEYPAEEDEVLSLLERVAEAKKLSAMNMKESGGRKRRGEDD 429

Query: 477 KQKRKTLAEKGLLKKRNKRR--RKEKTS 491
           ++  + L   G   + NK R   K+K S
Sbjct: 430 EESERFLG--GNKDRGNKERGGNKDKKS 450

[Close]

BLAST of CSPI06G11090 vs. TAIR 10
Match: AT4G16630.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 249.2 bits (635), Expect = 6.8e-66
Identity = 156/382 (40.84%), Postives = 219/382 (57.33%), Query Frame = 0


Query: 57  TFADLGLSEWIIQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPILQ 116
           TF +L LS  +++ C+ L  KKPT +Q  CIP  L G D+   A TGSGKTAAFALP L+
Sbjct: 168 TFMELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTLE 227

Query: 117 RLSETPFGVFA---LVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLNQTQSLLK 176
           RL   P  VFA   L++TPTRELA Q+    + L    +++C ++VGG+ +  Q   L  
Sbjct: 228 RLLFRPKRVFATRVLILTPTRELAVQIHSMIQNLAQFTDIKCGLIVGGLSVREQEVVLRS 287

Query: 177 RPHIVIATPGRIKVLLEDNPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNR 236
            P IV+ATPGR+   L ++  + V       L+LDEADR+L  GF  E+  + +  P+ R
Sbjct: 288 MPDIVVATPGRMIDHLRNS--MSVDLDDLAVLILDEADRLLQTGFATEITELVRLCPKRR 347

Query: 237 QTLLFSATMTKDLETLHKLSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHLLS 296
           QT+LFSATMT++++ L KLS NK     A    +    L ++ V I +  +      LLS
Sbjct: 348 QTMLFSATMTEEVKELVKLSLNKPLRLSADPSARRPPGLTEEVVRIRRTREANQEAVLLS 407

Query: 297 KMEDMGIRSAIIFVQTCKSCHLLGLLLEALDQEVAALHSVKSQSERLAALYRFKSGQVPV 356
                     IIF  T ++ H L +L      + A LH   +Q++RL +L  F+  +V  
Sbjct: 408 LCTRTFKSKVIIFSGTKQAAHRLKILFGLAGLKAAELHGNLTQAQRLDSLELFRKQEVDF 467

Query: 357 LLATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAMSFITQNDVHLIH 416
           L+ATDVA+RGLDI  V  VINY  PR    YVHRVGRTARAGR G A++F+T +D  L+ 
Sbjct: 468 LIATDVAARGLDIIGVQTVINYACPREIDSYVHRVGRTARAGREGYAVTFVTDSDRSLLK 527

Query: 417 EIEANLGKQLEIFECKENEVLE 436
            I   +G +L+     E  +++
Sbjct: 528 VIAKKVGSKLKSRVIPEQSIVK 547

[Close]

BLAST of CSPI06G11090 vs. TAIR 10
Match: AT5G65900.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 224.2 bits (570), Expect = 2.3e-58
Identity = 160/466 (34.33%), Postives = 236/466 (50.64%), Query Frame = 0


Query: 2   DQEVIVDRNFPLFSKPHRKKHKPSENPTAVPNVAPKKSLQIEKSTELATKSTNNITFADL 61
           + EVI +   P   K  +K+ K +E  +    V  K+    EK  E  +  TN  TF  L
Sbjct: 106 EDEVIAEEEEP--KKKKKKQRKDTEAKSEEEEVEDKEE---EKKLEETSIMTNK-TFESL 165

Query: 62  GLSEWIIQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPILQRLSET 121
            LS+   ++ KE+   + T +Q   IP ++ G DVLG A+TGSGKT AF +P ++ L   
Sbjct: 166 SLSDNTYKSIKEMGFARMTQIQAKAIPPLMMGEDVLGAARTGSGKTLAFLIPAVELLYRV 225

Query: 122 PF----GVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLNQTQSLLKRPHI 181
            F    G   LV+ PTRELA Q     + L    +     V+GG     + + L K  ++
Sbjct: 226 KFTPRNGTGVLVICPTRELAIQSYGVAKELLKYHSQTVGKVIGGEKRKTEAEILAKGVNL 285

Query: 182 VIATPGRIKVLLEDNPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNRQTLL 241
           ++ATPGR+   LE+      +F   KFLV+DEADR+L+  FEE+LK I   LP+ RQT L
Sbjct: 286 LVATPGRLLDHLENTNGF--IFKNLKFLVMDEADRILEQNFEEDLKKILNLLPKTRQTSL 345

Query: 242 FSATMTKDLETLHKLSANKAYFYEAYEGFKTV--DMLKQQYVFIPKDVKDLYLLHLLSKM 301
           FSAT +  +E L ++S     + +  EG K V  + L+Q Y  +P  ++ L+LL  L + 
Sbjct: 346 FSATQSAKVEDLARVSLTSPVYIDVDEGRKEVTNEGLEQGYCVVPSAMRLLFLLTFLKRF 405

Query: 302 EDMGIRSAIIFVQTCKSCHLLGLLLEALDQEVAALHSVKSQSERLAALYRFKSGQVPVLL 361
           +  G +  ++F  TCKS      L   +  +   +     Q++R     +F   +  +LL
Sbjct: 406 Q--GKKKIMVFFSTCKSTKFHAELFRYIKFDCLEIRGGIDQNKRTPTFLQFIKAETGILL 465

Query: 362 ATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARA-GRGGLAMSFITQNDVHLI-- 421
            T+VA+RGLD P VD ++ YD P  P DY+HRVGRTAR  G  G A+  +T  ++  I  
Sbjct: 466 CTNVAARGLDFPHVDWIVQYDPPDNPTDYIHRVGRTARGEGAKGKALLVLTPQELKFIQY 525

Query: 422 ----------HEIEANLGKQLEIFECKENEVLENITKVYKARHVAK 449
                     HE E    K L++    EN + EN      A+   K
Sbjct: 526 LKAAKIPVEEHEFEEK--KLLDVKPFVENLISENYALKESAKEAYK 559

[Close]

BLAST of CSPI06G11090 vs. TAIR 10
Match: AT3G58570.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 223.0 bits (567), Expect = 5.2e-58
Identity = 151/405 (37.28%), Postives = 218/405 (53.83%), Query Frame = 0


Query: 25  SENPTAVPNVAPKKSLQIEKSTELATKSTNNITFADLGLSEWI---IQTCKELVMKKPTA 84
           +E    V N    + + IE S +      N  TFA++ L E +   IQ CK +   KPT 
Sbjct: 117 NEQENTVINFEAYEDIPIETSGDNVPPPVN--TFAEIDLGEALNLNIQRCKYV---KPTP 176

Query: 85  VQTHCIPKILAGLDVLGIAQTGSGKTAAFALPILQRLS-----ETPFGV-----FALVVT 144
           VQ + IP + AG D++  AQTGSGKTAAF  PI+  +      E P GV      A++++
Sbjct: 177 VQRNAIPILAAGRDLMACAQTGSGKTAAFCFPIISGIMKDQHIERPRGVRGVYPLAVILS 236

Query: 145 PTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLNQTQSLLKRPHIVIATPGRIKVLLED 204
           PTRELA Q+ ++ R       ++  V  GG  +  Q + L +   I++ATPGR+  LLE 
Sbjct: 237 PTRELACQIHDEARKFSYQTGVKVVVAYGGTPVNQQIRELERGVDILVATPGRLNDLLER 296

Query: 205 NPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCL----PRNRQTLLFSATMTKDLE 264
                V     +FL LDEADR+LD+GFE +++ I Q +    P  RQT+LFSAT  ++++
Sbjct: 297 G---RVSLQMVRFLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPREIQ 356

Query: 265 TLHKLSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHLLSKMEDMGIRS----A 324
            L     +   F        + D++ Q+  F+    K  +L+ LL    + G +      
Sbjct: 357 RLASDFLSNYIFLAVGRVGSSTDLIVQRVEFVHDSDKRSHLMDLLHAQRENGNQGKQALT 416

Query: 325 IIFVQTCKSCHLLGLLLEALDQEVAALHSVKSQSERLAALYRFKSGQVPVLLATDVASRG 384
           ++FV+T K    L   L         +H  +SQ ER  AL  FK+G+ P+L+ATDVA+RG
Sbjct: 417 LVFVETKKGADSLENWLCINGFPATTIHGDRSQQEREVALRSFKTGRTPILVATDVAARG 476

Query: 385 LDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAMSFITQND 409
           LDIP V  V+N+D+P    DYVHR+GRT RAG  GLA +F   N+
Sbjct: 477 LDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGNSGLATAFFNDNN 513

The following BLAST results are available for this feature:

BLAST of CSPI06G11090 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SA27	2.1e-176	68.58	DEAD-box ATP-dependent RNA helicase 36 OS=Arabidopsis thaliana OX=3702 GN=RH36 P...	[more]
Q8L4E9	1.5e-147	56.85	DEAD-box ATP-dependent RNA helicase 36 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q9Y6V7	1.7e-109	49.56	Probable ATP-dependent RNA helicase DDX49 OS=Homo sapiens OX=9606 GN=DDX49 PE=1 ...	[more]
Q4FZF3	4.5e-107	48.67	Probable ATP-dependent RNA helicase DDX49 OS=Mus musculus OX=10090 GN=Ddx49 PE=2...	[more]
Q55BR9	4.9e-101	47.37	Probable ATP-dependent RNA helicase ddx49 OS=Dictyostelium discoideum OX=44689 G...	[more]

BLAST of CSPI06G11090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KD72	3.3e-270	99.39	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G136530 PE=3 SV=1	[more]
A0A5D3CBL8	2.4e-260	95.93	DEAD-box ATP-dependent RNA helicase 36 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3C309	2.4e-260	95.93	DEAD-box ATP-dependent RNA helicase 36 OS=Cucumis melo OX=3656 GN=LOC103496288 P...	[more]
A0A6J1D9D5	3.3e-241	88.15	DEAD-box ATP-dependent RNA helicase 36 OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1L281	6.1e-240	88.82	DEAD-box ATP-dependent RNA helicase 36 OS=Cucurbita maxima OX=3661 GN=LOC1114997...	[more]

BLAST of CSPI06G11090 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139902.1	6.9e-270	99.39	DEAD-box ATP-dependent RNA helicase 36 [Cucumis sativus] >KGN46799.1 hypothetica...	[more]
XP_008456302.1	4.9e-260	95.93	PREDICTED: DEAD-box ATP-dependent RNA helicase 36 [Cucumis melo] >KAA0054684.1 D...	[more]
XP_038900331.1	3.7e-255	93.56	DEAD-box ATP-dependent RNA helicase 36 [Benincasa hispida]	[more]
XP_022149766.1	6.7e-241	88.15	DEAD-box ATP-dependent RNA helicase 36 [Momordica charantia]	[more]
XP_023007160.1	1.3e-239	88.82	DEAD-box ATP-dependent RNA helicase 36 [Cucurbita maxima]	[more]

BLAST of CSPI06G11090 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G16280.1	1.5e-177	68.58	RNA helicase 36	[more]
AT5G60990.1	2.7e-91	43.08	DEA(D/H)-box RNA helicase family protein	[more]
AT4G16630.1	6.8e-66	40.84	DEA(D/H)-box RNA helicase family protein	[more]
AT5G65900.1	2.3e-58	34.33	DEA(D/H)-box RNA helicase family protein	[more]
AT3G58570.1	5.2e-58	37.28	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 314..395 e-value: 3.0E-29 score: 113.1
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 286..395 e-value: 1.0E-27 score: 96.7
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 287..434 score: 22.339985
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 75..275 e-value: 9.7E-51 score: 184.6
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 87..260 score: 31.018581
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 268..491 e-value: 1.8E-48 score: 167.2
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 18..261 e-value: 4.0E-70 score: 238.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 124..414
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 80..249 e-value: 3.6E-43 score: 147.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 465..491
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 459..491
None	No IPR available	PANTHER	PTHR24031:SF240	ATP-DEPENDENT RNA HELICASE DDX49-RELATED	coord: 55..487
None	No IPR available	PANTHER	PTHR24031	RNA HELICASE	coord: 55..487
None	No IPR available	CDD	cd18787	SF2_C_DEAD	coord: 272..404 e-value: 7.6655E-53 score: 172.692
None	No IPR available	CDD	cd17955	DEADc_DDX49	coord: 58..261 e-value: 6.90507E-120 score: 348.06
IPR000629	ATP-dependent RNA helicase DEAD-box, conserved site	PROSITE	PS00039	DEAD_ATP_HELICASE	coord: 206..214
IPR014014	RNA helicase, DEAD-box type, Q motif	PROSITE	PS51195	Q_MOTIF	coord: 56..84 score: 10.217175

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G11090.1	CSPI06G11090.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009561	megagametogenesis
biological_process	GO:0009791	post-embryonic development
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0005634	nucleus
cellular_component	GO:0090406	pollen tube
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003724	RNA helicase activity