CSPI06G10220 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI06G10220
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr6: 8831720 .. 8832018 (-)
RNA-Seq ExpressionCSPI06G10220
SyntenyCSPI06G10220
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGTTTCCTTTTGGCATAAGAACCAGGCCAAAGTCCTCGTTAAACCTTGAACGTGAGACTAATTCTGAGGAAATCTACTTAACGTCTTGTAGTTCATCTACCTCTTACTTAGCTAAAAGTTCAGATTAAGTTCTAAAACTTGTCTGAAACTCTCTTATTTATACACTTTTTCAATGAGGATTTCGACGTCGGAATGATTACCTCTATCCAGACAACGAATCACATACCAGCACATAACTCTCAATGGACGGTTGGATCAGAATGCTGACTTACTAAGCATCGTCCTTCAGACGTAA

mRNA sequence

ATGAGGTTTCCTTTTGGCATAAGAACCAGGCCAAAGTCCTCGTTAAACCTTGAACGTGAGACTAATTCTGAGGAAATCTACTTAACACAACGAATCACATACCAGCACATAACTCTCAATGGACGGTTGGATCAGAATGCTGACTTACTAAGCATCGTCCTTCAGACGTAA

Coding sequence (CDS)

ATGAGGTTTCCTTTTGGCATAAGAACCAGGCCAAAGTCCTCGTTAAACCTTGAACGTGAGACTAATTCTGAGGAAATCTACTTAACACAACGAATCACATACCAGCACATAACTCTCAATGGACGGTTGGATCAGAATGCTGACTTACTAAGCATCGTCCTTCAGACGTAA

Protein sequence

MRFPFGIRTRPKSSLNLERETNSEEIYLTQRITYQHITLNGRLDQNADLLSIVLQT*
Homology
[Close]
BLAST of CSPI06G10220 vs. ExPASy TrEMBL
Match: A0A0A0KCZ0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G126270 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.9e-20
Identity = 53/56 (94.64%), Postives = 54/56 (96.43%), Query Frame = 0 

Query: 1  MRFPFGIRTRPKSSLNLERETNSEEIYLTQRITYQHITLNGRLDQNADLLSIVLQT 57
          MRFPFGIRTRPKSS NLERETNSEEIYLTQRITY+HI LNGRLDQNADLLSIVLQT
Sbjct: 1  MRFPFGIRTRPKSSSNLERETNSEEIYLTQRITYRHIALNGRLDQNADLLSIVLQT 56

[Close]
BLAST of CSPI06G10220 vs. NCBI nr
Match: KGN46714.1 (hypothetical protein Csa_020616 [Cucumis sativus])

HSP 1 Score: 107.5 bits (267), Expect = 4.0e-20
Identity = 53/56 (94.64%), Postives = 54/56 (96.43%), Query Frame = 0 

Query: 1  MRFPFGIRTRPKSSLNLERETNSEEIYLTQRITYQHITLNGRLDQNADLLSIVLQT 57
          MRFPFGIRTRPKSS NLERETNSEEIYLTQRITY+HI LNGRLDQNADLLSIVLQT
Sbjct: 1  MRFPFGIRTRPKSSSNLERETNSEEIYLTQRITYRHIALNGRLDQNADLLSIVLQT 56

The following BLAST results are available for this feature:
BLAST of CSPI06G10220 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI06G10220 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KCZ01.9e-2094.64Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G126270 PE=4 SV=1[more]
BLAST of CSPI06G10220 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN46714.14.0e-2094.64hypothetical protein Csa_020616 [Cucumis sativus][more]
BLAST of CSPI06G10220 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI06G10220.1CSPI06G10220.1mRNA