CSPI06G04830 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI06G04830
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr6: 4393264 .. 4393794 (+)
RNA-Seq ExpressionCSPI06G04830
SyntenyCSPI06G04830
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTGTGTTTATTATACTACGGTTCTTAAGAACAGGAGGATACAAAAAGTTCAGAGGAACATATTGGACAATTACATTGCAAAGGTGTCTTATCTTCTGCCATGACTAGCCCACCCCCTTTTATCATAACAGTTGCTATTTTCCTTCCTATTAATATTACATACTTGGAATTAGGGATTTAAAAACTGCATGTATAACCAAGAAGTTTTGTTTCTGACCAGATGGATGGATTTGTTTTTAGTTTGTTTGAACTTCTTTGTTAAGTTTGCTCCATAAGGTGGGAGAAAATCTATCCTGCACTACTCTCTTCGGTGGCTACAAAGGAAGAAGGAAGGATATGGTGGTCCAGGTGATTGTCATGTCCCTTGTTCTGTGGTCATGGAAAATTGTTACTGACAGAATTGAAGAAGGTCTTTGGTTGAAGCTTTGACAATTTGATTAAACTTTCTGGTCTTGTGATTATTTTATTACTGAGATCTGATCTTGATTTGGTCTTCCACAGGATCTGCTAAGTTCGAGGAATGCTGA

mRNA sequence

ATGGAGTGTGTTTATTATACTACGGTTCTTAAGAACAGGAGGATACAAAAAGTTCAGAGGAACATATTGGACAATTACATTGCAAAGGTGGGAGAAAATCTATCCTGCACTACTCTCTTCGGTGGCTACAAAGGAAGAAGGAAGGATATGGTGGTCCAGGTGATTGTCATGTCCCTTGTTCTGTGGTCATGGAAAATTGTTACTGACAGAATTGAAGAAGGATCTGCTAAGTTCGAGGAATGCTGA

Coding sequence (CDS)

ATGGAGTGTGTTTATTATACTACGGTTCTTAAGAACAGGAGGATACAAAAAGTTCAGAGGAACATATTGGACAATTACATTGCAAAGGTGGGAGAAAATCTATCCTGCACTACTCTCTTCGGTGGCTACAAAGGAAGAAGGAAGGATATGGTGGTCCAGGTGATTGTCATGTCCCTTGTTCTGTGGTCATGGAAAATTGTTACTGACAGAATTGAAGAAGGATCTGCTAAGTTCGAGGAATGCTGA

Protein sequence

MECVYYTTVLKNRRIQKVQRNILDNYIAKVGENLSCTTLFGGYKGRRKDMVVQVIVMSLVLWSWKIVTDRIEEGSAKFEEC*
Homology
[Close]
BLAST of CSPI06G04830 vs. ExPASy TrEMBL
Match: A0A0A0KCL5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G056500 PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 5.9e-39
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0 

Query: 1  MECVYYTTVLKNRRIQKVQRNILDNYIAKVGENLSCTTLFGGYKGRRKDMVVQVIVMSLV 60
          MECVYYTTVLKNRRIQKVQRNILDNYIAKVGENLSCTTLFGGYKGRRKDMVVQVIVMSLV
Sbjct: 1  MECVYYTTVLKNRRIQKVQRNILDNYIAKVGENLSCTTLFGGYKGRRKDMVVQVIVMSLV 60

Query: 61 LWSWKIVTDRIEEGSAKFEEC 82
          LWSWKIVTDRIEEGSAKFEEC
Sbjct: 61 LWSWKIVTDRIEEGSAKFEEC 81

[Close]
BLAST of CSPI06G04830 vs. NCBI nr
Match: KGN46132.1 (hypothetical protein Csa_005261 [Cucumis sativus])

HSP 1 Score: 169.5 bits (428), Expect = 1.2e-38
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0 

Query: 1  MECVYYTTVLKNRRIQKVQRNILDNYIAKVGENLSCTTLFGGYKGRRKDMVVQVIVMSLV 60
          MECVYYTTVLKNRRIQKVQRNILDNYIAKVGENLSCTTLFGGYKGRRKDMVVQVIVMSLV
Sbjct: 1  MECVYYTTVLKNRRIQKVQRNILDNYIAKVGENLSCTTLFGGYKGRRKDMVVQVIVMSLV 60

Query: 61 LWSWKIVTDRIEEGSAKFEEC 82
          LWSWKIVTDRIEEGSAKFEEC
Sbjct: 61 LWSWKIVTDRIEEGSAKFEEC 81

The following BLAST results are available for this feature:
BLAST of CSPI06G04830 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI06G04830 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KCL55.9e-39100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G056500 PE=4 SV=1[more]
BLAST of CSPI06G04830 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN46132.11.2e-38100.00hypothetical protein Csa_005261 [Cucumis sativus][more]
BLAST of CSPI06G04830 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI06G04830.1CSPI06G04830.1mRNA