CSPI06G02700 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI06G02700
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Unknown protein
Location	Chr6: 2159913 .. 2160743 (-)
RNA-Seq Expression	CSPI06G02700
Synteny	CSPI06G02700

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCAAAAAGAAAAAGAAACGAAAATTCAAGGCAAGATTTCAAAACTTACCCAAGAAAAATGAAAGGTTCAACTGAAAAGAGCAAGAAGCAGGATGATAATGAATCTGATCTTCACCCTATTCCTCACTGTTCTATCATTTTAACAATCTTTGATTCAATCCTTCAACCTTTCATCTCCATTTTGAGGTTCTTTGGTTTTAAACGCGATGCCCCACCTTACCGTCCAGCGTCCTCCACACTGGAAGATTGCTACACCGCCGGCTCAAATCCGCCTTCCACGGCGGTCGACCCACCTCATGACGATTCTGTAAGCCTATCTCTCTCGACTCTCTCCCTCTTTTTATGTTATTTTATTTTAATTTAACTCTTCCAAATACTGAACATTAAGTTTTAAGTGTATAACTTATAGATCCCTGCAGATGAAATTGAAATGATATACAAATTAAATTTTCAAGAGCAACGTGCTGACAATATAAAACAGAAACAGGGTTTACATTAATTGGACCATTTTTGACGAACTTTTCTGTACAATAACTTCAATTTTAAAGATTGTGTTGCGTTTTTCTGTAGGAGGAAGAAAGTGAGTACTATAGGCCACATGTTCCTCCGCGGCCGCCGTGGAGCACTGGCGGCGGTGGTCAGATAGACTAATATGTATATTGTAATAATCAGGTGTGGCTGGTTTGTATGATCTAAAGTAATATAAAGCTTGAGATCATTGTAGCTATGGTTACATGAATTAGAGTGTATGAAGTAGCAGAAAGAAAAGAAATTCCAAGCTTCCTAGTTATTTAATATAGTGATTGTATTATAAATTTATTCTTTGATTTTT

mRNA sequence

GCAAAAAGAAAAAGAAACGAAAATTCAAGGCAAGATTTCAAAACTTACCCAAGAAAAATGAAAGGTTCAACTGAAAAGAGCAAGAAGCAGGATGATAATGAATCTGATCTTCACCCTATTCCTCACTGTTCTATCATTTTAACAATCTTTGATTCAATCCTTCAACCTTTCATCTCCATTTTGAGGTTCTTTGGTTTTAAACGCGATGCCCCACCTTACCGTCCAGCGTCCTCCACACTGGAAGATTGCTACACCGCCGGCTCAAATCCGCCTTCCACGGCGGTCGACCCACCTCATGACGATTCTGAGGAAGAAAGTGAGTACTATAGGCCACATGTTCCTCCGCGGCCGCCGTGGAGCACTGGCGGCGGTGGTCAGATAGACTAATATGTATATTGTAATAATCAGGTGTGGCTGGTTTGTATGATCTAAAGTAATATAAAGCTTGAGATCATTGTAGCTATGGTTACATGAATTAGAGTGTATGAAGTAGCAGAAAGAAAAGAAATTCCAAGCTTCCTAGTTATTTAATATAGTGATTGTATTATAAATTTATTCTTTGATTTTT

Coding sequence (CDS)

ATGAAAGGTTCAACTGAAAAGAGCAAGAAGCAGGATGATAATGAATCTGATCTTCACCCTATTCCTCACTGTTCTATCATTTTAACAATCTTTGATTCAATCCTTCAACCTTTCATCTCCATTTTGAGGTTCTTTGGTTTTAAACGCGATGCCCCACCTTACCGTCCAGCGTCCTCCACACTGGAAGATTGCTACACCGCCGGCTCAAATCCGCCTTCCACGGCGGTCGACCCACCTCATGACGATTCTGAGGAAGAAAGTGAGTACTATAGGCCACATGTTCCTCCGCGGCCGCCGTGGAGCACTGGCGGCGGTGGTCAGATAGACTAA

Protein sequence

MKGSTEKSKKQDDNESDLHPIPHCSIILTIFDSILQPFISILRFFGFKRDAPPYRPASSTLEDCYTAGSNPPSTAVDPPHDDSEEESEYYRPHVPPRPPWSTGGGGQID*

Homology

[Close]

BLAST of CSPI06G02700 vs. ExPASy TrEMBL
Match: A0A0A0KBZ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G020160 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 8.5e-57
Identity = 108/109 (99.08%), Postives = 109/109 (100.00%), Query Frame = 0


Query: 1   MKGSTEKSKKQDDNESDLHPIPHCSIILTIFDSILQPFISILRFFGFKRDAPPYRPASST 60
           MKGSTEKSKKQDDNESDLHPIPHCSIILTIFDSILQPFISILRFFGFKRDAPPYRPASS+
Sbjct: 1   MKGSTEKSKKQDDNESDLHPIPHCSIILTIFDSILQPFISILRFFGFKRDAPPYRPASSS 60

Query: 61  LEDCYTAGSNPPSTAVDPPHDDSEEESEYYRPHVPPRPPWSTGGGGQID 110
           LEDCYTAGSNPPSTAVDPPHDDSEEESEYYRPHVPPRPPWSTGGGGQID
Sbjct: 61  LEDCYTAGSNPPSTAVDPPHDDSEEESEYYRPHVPPRPPWSTGGGGQID 109

[Close]

BLAST of CSPI06G02700 vs. ExPASy TrEMBL
Match: A0A5D3D4J4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold607G00380 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 1.4e-51
Identity = 101/108 (93.52%), Postives = 104/108 (96.30%), Query Frame = 0


Query: 1   MKGSTEKSKKQDDNESDLHPIPHCSIILTIFDSILQPFISILRFFGFKRDAPPYRPASST 60
           MK STEKSKKQ DNESDLHPIPHCSIILTIFDSILQ FI+ILRFFGFKR+APPYRPASS+
Sbjct: 1   MKDSTEKSKKQADNESDLHPIPHCSIILTIFDSILQAFIAILRFFGFKRNAPPYRPASSS 60

Query: 61  LEDCYTAGSNPPSTAVDPPHDDSEEESEYYRPHVPPRPPWSTGGGGQI 109
           LEDCYTAGSNPPSTAVDPPHDDSEEESEYYRPHVPP PPWSTGGGGQI
Sbjct: 61  LEDCYTAGSNPPSTAVDPPHDDSEEESEYYRPHVPPPPPWSTGGGGQI 108

[Close]

BLAST of CSPI06G02700 vs. ExPASy TrEMBL
Match: A0A1S3CLD8 (uncharacterized protein LOC103502256 OS=Cucumis melo OX=3656 GN=LOC103502256 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 1.4e-51
Identity = 101/108 (93.52%), Postives = 104/108 (96.30%), Query Frame = 0


Query: 1   MKGSTEKSKKQDDNESDLHPIPHCSIILTIFDSILQPFISILRFFGFKRDAPPYRPASST 60
           MK STEKSKKQ DNESDLHPIPHCSIILTIFDSILQ FI+ILRFFGFKR+APPYRPASS+
Sbjct: 40  MKDSTEKSKKQADNESDLHPIPHCSIILTIFDSILQAFIAILRFFGFKRNAPPYRPASSS 99

Query: 61  LEDCYTAGSNPPSTAVDPPHDDSEEESEYYRPHVPPRPPWSTGGGGQI 109
           LEDCYTAGSNPPSTAVDPPHDDSEEESEYYRPHVPP PPWSTGGGGQI
Sbjct: 100 LEDCYTAGSNPPSTAVDPPHDDSEEESEYYRPHVPPPPPWSTGGGGQI 147

[Close]

BLAST of CSPI06G02700 vs. ExPASy TrEMBL
Match: A0A5A7T6U0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold607G00390 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 5.0e-09
Identity = 44/108 (40.74%), Postives = 62/108 (57.41%), Query Frame = 0


Query: 1   MKGSTEKSKKQDDNESDLHPIPHCSIILTIFDSILQPFISILRFFGFKRDAPPYRPASST 60
           ++ S E +K+ +D+   +H   HC   L+IF+ + Q  ++  RF GF+     +RP  S+
Sbjct: 14  IENSNENTKELNDDV--VH--DHCPFFLSIFNLVFQITMAFYRFLGFR----VHRPILSS 73

Query: 61  LEDCYTAGSNPPSTAVDPP-HDDSEEESEYYRPHVPPRPPWSTGGGGQ 108
            ED Y   S PP T VDPP  D  EEE E+ R + PP PP S GGGG+
Sbjct: 74  SEDSYPVDSQPPPTTVDPPIEDPGEEEREFARRNPPPPPPPSNGGGGR 113

[Close]

BLAST of CSPI06G02700 vs. ExPASy TrEMBL
Match: A0A1S3CMT1 (uncharacterized protein LOC103502255 OS=Cucumis melo OX=3656 GN=LOC103502255 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 5.0e-09
Identity = 44/108 (40.74%), Postives = 62/108 (57.41%), Query Frame = 0


Query: 1   MKGSTEKSKKQDDNESDLHPIPHCSIILTIFDSILQPFISILRFFGFKRDAPPYRPASST 60
           ++ S E +K+ +D+   +H   HC   L+IF+ + Q  ++  RF GF+     +RP  S+
Sbjct: 14  IENSNENTKELNDDV--VH--DHCPFFLSIFNLVFQITMAFYRFLGFR----VHRPILSS 73

Query: 61  LEDCYTAGSNPPSTAVDPP-HDDSEEESEYYRPHVPPRPPWSTGGGGQ 108
            ED Y   S PP T VDPP  D  EEE E+ R + PP PP S GGGG+
Sbjct: 74  SEDSYPVDSQPPPTTVDPPIEDPGEEEREFARRNPPPPPPPSNGGGGR 113

[Close]

BLAST of CSPI06G02700 vs. NCBI nr
Match: XP_004138360.2 (uncharacterized protein LOC101208454 [Cucumis sativus] >KAE8646592.1 hypothetical protein Csa_005099 [Cucumis sativus])

HSP 1 Score: 229.2 bits (583), Expect = 1.8e-56
Identity = 108/109 (99.08%), Postives = 109/109 (100.00%), Query Frame = 0


Query: 1   MKGSTEKSKKQDDNESDLHPIPHCSIILTIFDSILQPFISILRFFGFKRDAPPYRPASST 60
           MKGSTEKSKKQDDNESDLHPIPHCSIILTIFDSILQPFISILRFFGFKRDAPPYRPASS+
Sbjct: 30  MKGSTEKSKKQDDNESDLHPIPHCSIILTIFDSILQPFISILRFFGFKRDAPPYRPASSS 89

Query: 61  LEDCYTAGSNPPSTAVDPPHDDSEEESEYYRPHVPPRPPWSTGGGGQID 110
           LEDCYTAGSNPPSTAVDPPHDDSEEESEYYRPHVPPRPPWSTGGGGQID
Sbjct: 90  LEDCYTAGSNPPSTAVDPPHDDSEEESEYYRPHVPPRPPWSTGGGGQID 138

[Close]

BLAST of CSPI06G02700 vs. NCBI nr
Match: XP_008464348.1 (PREDICTED: uncharacterized protein LOC103502256 [Cucumis melo])

HSP 1 Score: 211.8 bits (538), Expect = 2.9e-51
Identity = 101/108 (93.52%), Postives = 104/108 (96.30%), Query Frame = 0


Query: 1   MKGSTEKSKKQDDNESDLHPIPHCSIILTIFDSILQPFISILRFFGFKRDAPPYRPASST 60
           MK STEKSKKQ DNESDLHPIPHCSIILTIFDSILQ FI+ILRFFGFKR+APPYRPASS+
Sbjct: 40  MKDSTEKSKKQADNESDLHPIPHCSIILTIFDSILQAFIAILRFFGFKRNAPPYRPASSS 99

Query: 61  LEDCYTAGSNPPSTAVDPPHDDSEEESEYYRPHVPPRPPWSTGGGGQI 109
           LEDCYTAGSNPPSTAVDPPHDDSEEESEYYRPHVPP PPWSTGGGGQI
Sbjct: 100 LEDCYTAGSNPPSTAVDPPHDDSEEESEYYRPHVPPPPPWSTGGGGQI 147

[Close]

BLAST of CSPI06G02700 vs. NCBI nr
Match: KAA0039201.1 (uncharacterized protein E6C27_scaffold121G001180 [Cucumis melo var. makuwa] >TYK18468.1 uncharacterized protein E5676_scaffold607G00380 [Cucumis melo var. makuwa])

HSP 1 Score: 211.8 bits (538), Expect = 2.9e-51
Identity = 101/108 (93.52%), Postives = 104/108 (96.30%), Query Frame = 0


Query: 1   MKGSTEKSKKQDDNESDLHPIPHCSIILTIFDSILQPFISILRFFGFKRDAPPYRPASST 60
           MK STEKSKKQ DNESDLHPIPHCSIILTIFDSILQ FI+ILRFFGFKR+APPYRPASS+
Sbjct: 1   MKDSTEKSKKQADNESDLHPIPHCSIILTIFDSILQAFIAILRFFGFKRNAPPYRPASSS 60

Query: 61  LEDCYTAGSNPPSTAVDPPHDDSEEESEYYRPHVPPRPPWSTGGGGQI 109
           LEDCYTAGSNPPSTAVDPPHDDSEEESEYYRPHVPP PPWSTGGGGQI
Sbjct: 61  LEDCYTAGSNPPSTAVDPPHDDSEEESEYYRPHVPPPPPWSTGGGGQI 108

[Close]

BLAST of CSPI06G02700 vs. NCBI nr
Match: XP_038886557.1 (uncharacterized protein LOC120076731 [Benincasa hispida])

HSP 1 Score: 157.1 bits (396), Expect = 8.5e-35
Identity = 79/108 (73.15%), Postives = 87/108 (80.56%), Query Frame = 0


Query: 4   STEKSKKQ--DDNESDLHPIPHCSIILTIFDSILQPFISILRFFGFKRDAPPYRPASSTL 63
           S EKSKKQ  DD+E+DLH   HC I L I DSILQ FI+ILRF GF  + PPYRPA S+ 
Sbjct: 3   SIEKSKKQVDDDDETDLH--SHCPIFLIICDSILQAFIAILRFLGFNHNGPPYRPAPSSP 62

Query: 64  EDCYTAGSNPPSTAVDPPHDDSEEESEYYRPHVPPRPPWSTGGGGQID 110
           EDCYT GS+PPSTAV+PP D+SEEESEYYRPHVPP PPWSTGGGGQ D
Sbjct: 63  EDCYTDGSDPPSTAVNPPDDESEEESEYYRPHVPPPPPWSTGGGGQTD 108

[Close]

BLAST of CSPI06G02700 vs. NCBI nr
Match: XP_008464347.1 (PREDICTED: uncharacterized protein LOC103502255 [Cucumis melo] >KAA0039202.1 uncharacterized protein E6C27_scaffold121G001200 [Cucumis melo var. makuwa] >TYK18469.1 uncharacterized protein E5676_scaffold607G00390 [Cucumis melo var. makuwa])

HSP 1 Score: 70.5 bits (171), Expect = 1.0e-08
Identity = 44/108 (40.74%), Postives = 62/108 (57.41%), Query Frame = 0


Query: 1   MKGSTEKSKKQDDNESDLHPIPHCSIILTIFDSILQPFISILRFFGFKRDAPPYRPASST 60
           ++ S E +K+ +D+   +H   HC   L+IF+ + Q  ++  RF GF+     +RP  S+
Sbjct: 14  IENSNENTKELNDDV--VH--DHCPFFLSIFNLVFQITMAFYRFLGFR----VHRPILSS 73

Query: 61  LEDCYTAGSNPPSTAVDPP-HDDSEEESEYYRPHVPPRPPWSTGGGGQ 108
            ED Y   S PP T VDPP  D  EEE E+ R + PP PP S GGGG+
Sbjct: 74  SEDSYPVDSQPPPTTVDPPIEDPGEEEREFARRNPPPPPPPSNGGGGR 113

The following BLAST results are available for this feature:

BLAST of CSPI06G02700 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI06G02700 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KBZ4	8.5e-57	99.08	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G020160 PE=4 SV=1	[more]
A0A5D3D4J4	1.4e-51	93.52	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CLD8	1.4e-51	93.52	uncharacterized protein LOC103502256 OS=Cucumis melo OX=3656 GN=LOC103502256 PE=...	[more]
A0A5A7T6U0	5.0e-09	40.74	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CMT1	5.0e-09	40.74	uncharacterized protein LOC103502255 OS=Cucumis melo OX=3656 GN=LOC103502255 PE=...	[more]

BLAST of CSPI06G02700 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004138360.2	1.8e-56	99.08	uncharacterized protein LOC101208454 [Cucumis sativus] >KAE8646592.1 hypothetica...	[more]
XP_008464348.1	2.9e-51	93.52	PREDICTED: uncharacterized protein LOC103502256 [Cucumis melo]	[more]
KAA0039201.1	2.9e-51	93.52	uncharacterized protein E6C27_scaffold121G001180 [Cucumis melo var. makuwa] >TYK...	[more]
XP_038886557.1	8.5e-35	73.15	uncharacterized protein LOC120076731 [Benincasa hispida]	[more]
XP_008464347.1	1.0e-08	40.74	PREDICTED: uncharacterized protein LOC103502255 [Cucumis melo] >KAA0039202.1 unc...	[more]

BLAST of CSPI06G02700 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..19
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 78..92

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G02700.1	CSPI06G02700.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane