CSPI06G02440 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI06G02440
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Thioredoxin-like protein
Location	Chr6: 1828354 .. 1832016 (-)
RNA-Seq Expression	CSPI06G02440
Synteny	CSPI06G02440

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCTCATTCCTTTCATCCAACGCTTCTCATTTATCAGGAACAGAATAGCTAAAATTTTCCCCTTCACTTCTCGTTGTCCGATTGAAGCCAAAACAGACGACAGAATTCCTCTATCGACATTGTGGGAGCTGAGAGAGCCTTCACATGGCGGCCTCCTTTTCAACTTCACCTTATCCTATCCTCACCTCTCACCGCTCCAATCGCTTGCCTGCATACCATTCTTCTTCATCCAGCCTCTCTTTCTCCTCCTCTCTACACCTACCTCTTCAGCTTAGACGTTTTCCACTTGCAAACACTCGGATTTCACCTCCATCCTCCTCTCCATCCTTCCCTGTGGTAATCATCTCTTTTCTTTCATCTTTTTGTCGTTTTAAACGAGGAACTAATGAACAATTTGTCATCCATGGTTTTTCCATTTATTTCGCGCCTAAATTTCCTCCACTTATTCTTAATTTCTAGGTTTCTTCGCTTAATGCTAACTATAGACGTTCTGGAGAACGAAACTCATATGACTTCGTTGTTTTTCTTTTATTTCTGGAATTCCTTTTTGTTTGAATTTTGATTCTAACCGTGTTTACTACCTCCTTACGCAGAACTAGAACCTATATGGTTCATTTGTTATATTGGAGTTCGCTCATCTAGTTACATATTTGGATTTGTTTCTATCTGATTCTATTATTTTTCCGATTCATTCCAAATCTCAGTTCTTAACTAGTTTCCGCATTATTGTTCACTCTGAGTAGTTAGCAAGATTGCATTTCCCTTTTTCTCGTGCTTCATGCGCTTGAAAGCACAACTGCTGCATTCGTATTTTTCCTGATTCTGACGTAGTTTGTTTAAAATGGATGACAATTTTAGTTAAAACTGCTGTAACGAATAACAATGGACTTGTTCGAACTTCTGTAGGTCAAAGCAAAGAACCAAACCTTCTCTTCCTTTGATGATTTACTGGCCAACTCGGACACACCTGTGTTAGTTGACTTCTATGCAACATGGTTAGTCCCTTTCTCTCTCTTCTGCACACACCTATATCTCATCACTTCTCTCTCAAAATGGTATTGGTAATCTGTGGGAATCATATTTTTAACCTATAATTTCAAAATAAGCTATTGTTCCTCTGGATCAATGAGCATGTTAGTGCTTAACTATTGAGGAGAAAATGAGAGGCATAAGGGTATTGTGGAACAGATTTTTTTTTTTTTTTTTTGTAGAAGGAAGTAATGTAATGTAATGTTTGTAAACGATGAGTAAAAATGTAAAATGTGGTATGTCTGTGTATTCCTTCATTTCTACTCAATGAAAGTTGTTTCAATAATAACAGAAATACTGAGTAAACATAGCTCCTCTATCGCAGGTGTGGTCCTTGTCAGTTCATGGTTCCTATTCTTGAACAAGTTAGTGCAGCACTGATTGACAAAGTCCAGGTGGTCAAGATTGACACCGAAAAATATCCTGCCATTGCTGATAAATACAGAATAGAGGCATTGCCTACATTCATCCTCTTCAAAGATGGAAAACCCCTTGACCGATTCGTAAGTGAAAGCTTTATATTTTTTCTAGCCAATTGGAGATATATCAAATGTATGATAAGTTTATGCATGAAGAAACGACATATATGTTTCAGAATCTTATTCGATTTCATTTTTGAGTTGAACTAAAATGGGAAGTTTTCAAATGATTAGTTGTGTCAAGAAAGTCTGATTATCCTTGAAGTTTCTATTAAGATTTATCCTTTAATACCTCAAAACCATTGTCTACTGTATCTTTACTCTACTTTTTACCAGTTTAATTTCAAAGAGTTAAAAAGGGTAGGCCCAAGCTTCCATTGTGCAGTTTGCTACCGTTGATTTAATCACATTAGCACATCTTCTTTCTTGCTAGGCTACAACTATTTTTCCTTTTCTGTTAGTTCTAGTGCTATCTCATAAACAGTTTTTTAACATTTTAGACTTCCCTGTTGAAATGTCTGGCAAATGGACGTTCGGTTTCTTGTGCTTAGATTATTTATTATTTATTTTAAACATGCATGCAAATTATATATGTTCAGGAAGGAGCTTTGGCTGCGCGTGAGCTCATCCAACGCATTGAAGATTCTCTGAAGGTTAAGCAATAACAGTGGTGAGATTCTATACCCCGATTGAGGAGTTTATCTAAACTTGCATGCTTAAAAGATTTAGCACCCCAAACCAAATCCCTGACTGTAATCAAAATCAATTTTTTGCTAATAATTTTAGATTCACGTTCTGATAAATATGAATAGATGAAACTTAAAATACTTTGTTGGTTTATAATGCATTTAAAGGAGTAGACACAGTAAGCACACAACTCACATTTAGAGGGTCTATCAAATTAGAATCAGCTTGCTAATGTAAAAGTGTCAATTCTGGTTATAATAACCATACCCAAGACTAAGTTGGGGACTTCAGCCTCTTGCTTGGTAGTTGACCTAGACTATACCTTTCCTTAGTAGTTTCCAATTCTGATTCATGGGGCTATCGTCCATGTGCCTGGTTCTTTTTTAACATTGAAAGCAGTTTAGTATCACTCTGTCACATGTTCGGCTTTCACTTTTTATTTTTTTTATTAATCTTTCTCCACAAAGCTTCTGCGAGGGTGGTAAGAAAATAGTTATAACTGGTATCTACACCCAAACATAAATTATTGTAATCCACAAACTATAATAACCAACTCAACATCCCACACACTTAAAGTTTCCTTCTAGTACTCTAGAGTTTAGTCTTCTTTGCCTGAACTTGATAAACTTATTCCGTTAATTAAAGGACAAGTGGACAACTAATTTTGTTATCTGGTCGATCATCAAGAATATGATATTGTATTCCATGGCATGTCTTTTCGAGTGTTTATTCATCTTGAACTTTGATTAAAATTTCAAAGTTAATCACCTACTAAATATTTAAAAACACTCCAATTTTTTAAAGTTTTATGTATCTATAGTTTCTTCATTCTTGAGTTTTCAAATCTTATAAGTATTTGAATGTAGGTTGATAATTAAAAATATTAATTATGCCAATTGAGATTAAAGTATTACTTTTGTATCAATTGACTTGCATGACAGAAATACTCTATTGAGAAGTTTCCTGATACTACAAGTATAAACTATAAAATTTTGAGAACACGTGATTTATTCTTCTAAAATTCTGGGATGTTGAACATGCAGGGGAGATGTGACTGAGAAATTAAAGAAATGGAAATCAATGTCTTCAACAGGAATTCTGGGTATGATAGATGAGAAACTTCAATAAAATTAACCCCCCCTCTCAAACCAAAAAATGAAAAAAAGAAAAGAAAGAACATTTTAGACCACTCTGTAAACTTGTATGTAATTGAAATACCTTGAAGAATGTAACTATAGACGTTCGTATTAATCCCAATTTTTGTGTTCATTTTATTGCAATAAGATGCTTAATGTTCCTGATAAATAAACATTCAGTTTGTGGCTATGTTTACAATGTTGATGAATTGGTACAAGGGTATTCTTAAGTGGCAGAGTGGGCTTGGGCTTGCTGCCACGATCTACTGTGACCTAGTCCTTTGTTACTCCGATTTGAAAAAATACAATGTTGATGAATTGGTGATAGATGTGTAATAAGATGGGGAATTGTTACACATTTGATTTTTTAATTTGAGTAATTATTCTTTTAG

mRNA sequence

ATCTCATTCCTTTCATCCAACGCTTCTCATTTATCAGGAACAGAATAGCTAAAATTTTCCCCTTCACTTCTCGTTGTCCGATTGAAGCCAAAACAGACGACAGAATTCCTCTATCGACATTGTGGGAGCTGAGAGAGCCTTCACATGGCGGCCTCCTTTTCAACTTCACCTTATCCTATCCTCACCTCTCACCGCTCCAATCGCTTGCCTGCATACCATTCTTCTTCATCCAGCCTCTCTTTCTCCTCCTCTCTACACCTACCTCTTCAGCTTAGACGTTTTCCACTTGCAAACACTCGGATTTCACCTCCATCCTCCTCTCCATCCTTCCCTGTGGTCAAAGCAAAGAACCAAACCTTCTCTTCCTTTGATGATTTACTGGCCAACTCGGACACACCTGTGTTAGTTGACTTCTATGCAACATGGTGTGGTCCTTGTCAGTTCATGGTTCCTATTCTTGAACAAGTTAGTGCAGCACTGATTGACAAAGTCCAGGTGGTCAAGATTGACACCGAAAAATATCCTGCCATTGCTGATAAATACAGAATAGAGGCATTGCCTACATTCATCCTCTTCAAAGATGGAAAACCCCTTGACCGATTCGAAGGAGCTTTGGCTGCGCGTGAGCTCATCCAACGCATTGAAGATTCTCTGAAGGTTAAGCAATAACAGTGGGGAGATGTGACTGAGAAATTAAAGAAATGGAAATCAATGTCTTCAACAGGAATTCTGGGTATGATAGATGAGAAACTTCAATAAAATTAACCCCCCCTCTCAAACCAAAAAATGAAAAAAAGAAAAGAAAGAACATTTTAGACCACTCTGTAAACTTGTATGTAATTGAAATACCTTGAAGAATGTAACTATAGACGTTCGTATTAATCCCAATTTTTGTGTTCATTTTATTGCAATAAGATGCTTAATGTTCCTGATAAATAAACATTCAGTTTGTGGCTATGTTTACAATGTTGATGAATTGGTACAAGGGTATTCTTAAGTGGCAGAGTGGGCTTGGGCTTGCTGCCACGATCTACTGTGACCTAGTCCTTTGTTACTCCGATTTGAAAAAATACAATGTTGATGAATTGGTGATAGATGTGTAATAAGATGGGGAATTGTTACACATTTGATTTTTTAATTTGAGTAATTATTCTTTTAG

Coding sequence (CDS)

ATGGCGGCCTCCTTTTCAACTTCACCTTATCCTATCCTCACCTCTCACCGCTCCAATCGCTTGCCTGCATACCATTCTTCTTCATCCAGCCTCTCTTTCTCCTCCTCTCTACACCTACCTCTTCAGCTTAGACGTTTTCCACTTGCAAACACTCGGATTTCACCTCCATCCTCCTCTCCATCCTTCCCTGTGGTCAAAGCAAAGAACCAAACCTTCTCTTCCTTTGATGATTTACTGGCCAACTCGGACACACCTGTGTTAGTTGACTTCTATGCAACATGGTGTGGTCCTTGTCAGTTCATGGTTCCTATTCTTGAACAAGTTAGTGCAGCACTGATTGACAAAGTCCAGGTGGTCAAGATTGACACCGAAAAATATCCTGCCATTGCTGATAAATACAGAATAGAGGCATTGCCTACATTCATCCTCTTCAAAGATGGAAAACCCCTTGACCGATTCGAAGGAGCTTTGGCTGCGCGTGAGCTCATCCAACGCATTGAAGATTCTCTGAAGGTTAAGCAATAA

Protein sequence

MAASFSTSPYPILTSHRSNRLPAYHSSSSSLSFSSSLHLPLQLRRFPLANTRISPPSSSPSFPVVKAKNQTFSSFDDLLANSDTPVLVDFYATWCGPCQFMVPILEQVSAALIDKVQVVKIDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKVKQ*

Homology

[Close]

BLAST of CSPI06G02440 vs. ExPASy Swiss-Prot
Match: Q6NPF9 (Thioredoxin Y1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g76760 PE=1 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 1.6e-46
Identity = 102/172 (59.30%), Postives = 124/172 (72.09%), Query Frame = 0


Query: 4   SFSTSPYPILTSHRSNRLPAYHSSSSSLSFSSSLHLPLQLRRFPLANTRISPPSSSPSFP 63
           S S+S  P L S  S+ + A+ S S      S++     +RR    + +    SS+    
Sbjct: 5   SLSSSTVPSLNSKESSGVSAFASRS-----ISAVKFQFPVRRVRTGDLKFPSLSSTTRCT 64

Query: 64  V--VKAKNQTFSSFDDLLANSDTPVLVDFYATWCGPCQFMVPILEQVSAALIDKVQVVKI 123
              ++AK QTF SF+DLL NSD PVLVD+YATWCGPCQFMVPIL +VS  L DK+QVVKI
Sbjct: 65  PRRIEAKKQTFDSFEDLLVNSDKPVLVDYYATWCGPCQFMVPILNEVSETLKDKIQVVKI 124

Query: 124 DTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKVK 174
           DTEKYP+IA+KY+IEALPTFILFKDG+P DRFEGAL A++LIQRIEDSLKVK
Sbjct: 125 DTEKYPSIANKYKIEALPTFILFKDGEPCDRFEGALTAKQLIQRIEDSLKVK 171

[Close]

BLAST of CSPI06G02440 vs. ExPASy Swiss-Prot
Match: Q8L7S9 (Thioredoxin Y2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g43560 PE=2 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 3.9e-45
Identity = 99/156 (63.46%), Postives = 116/156 (74.36%), Query Frame = 0


Query: 22  PAYHSSSSSLSFSSSLHLPLQLRRFPLANTRISPPSSSPSF---PVVKAKNQTFSSFDDL 81
           P   +S+S     SS+ LP Q+RRF      +  PSSS  F    V  AK QTF+SFDDL
Sbjct: 16  PESSNSASPSRTLSSVRLPSQIRRF----GSVQSPSSSTRFAPLTVRAAKKQTFNSFDDL 75

Query: 82  LANSDTPVLVDFYATWCGPCQFMVPILEQVSAALIDKVQVVKIDTEKYPAIADKYRIEAL 141
           L NSD PVLVDFYATWCGPCQ MVPIL +VS  L D + VVKIDTEKYP++A+KY+IEAL
Sbjct: 76  LQNSDKPVLVDFYATWCGPCQLMVPILNEVSETLKDIIAVVKIDTEKYPSLANKYQIEAL 135

Query: 142 PTFILFKDGKPLDRFEGALAARELIQRIEDSLKVKQ 175
           PTFILFKDGK  DRFEGAL A +L++RIE+SL+VKQ
Sbjct: 136 PTFILFKDGKLWDRFEGALPANQLVERIENSLQVKQ 167

[Close]

BLAST of CSPI06G02440 vs. ExPASy Swiss-Prot
Match: Q5JMR9 (Thioredoxin Y, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0963400 PE=3 SV=2)

HSP 1 Score: 166.0 bits (419), Expect = 3.8e-40
Identity = 81/121 (66.94%), Postives = 100/121 (82.64%), Query Frame = 0


Query: 52  RISPPSSSPSFPVVKAKNQTFSSFDDLLANSDTPVLVDFYATWCGPCQFMVPILEQVSAA 111
           R + PS   +   V+AK QTFSSFD+LL  S+ PVLVDFYATWCGPCQ+MVPIL++VS  
Sbjct: 46  RAAAPSRRGATLRVQAKKQTFSSFDELLEKSEKPVLVDFYATWCGPCQYMVPILQEVSEK 105

Query: 112 LIDKVQVVKIDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLK 171
           L DK+QVVKIDTEKY +IA++Y+IEALPTFI+FK+GKP  RFEGAL A +LIQ+IE +L+
Sbjct: 106 LGDKIQVVKIDTEKYTSIANRYQIEALPTFIIFKNGKPCHRFEGALPANQLIQQIESALE 165

Query: 172 V 173
           V
Sbjct: 166 V 166

[Close]

BLAST of CSPI06G02440 vs. ExPASy Swiss-Prot
Match: P52232 (Thioredoxin-like protein slr0233 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=slr0233 PE=1 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 2.3e-29
Identity = 59/101 (58.42%), Postives = 79/101 (78.22%), Query Frame = 0


Query: 67  AKNQTFSSFDDLLANSDTPVLVDFYATWCGPCQFMVPILEQVSAALIDKVQVVKIDTEKY 126
           A  + F++F ++LA S  PVLVDFYATWCGPCQ M PILEQV + L  ++QVVKIDT+KY
Sbjct: 2   AVKKQFANFAEMLAGSPKPVLVDFYATWCGPCQMMAPILEQVGSHLRQQIQVVKIDTDKY 61

Query: 127 PAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIE 168
           PAIA +Y+I++LPT +LFK G+P+ R EG   A +LIQ+++
Sbjct: 62  PAIATQYQIQSLPTLVLFKQGQPVHRMEGVQQAAQLIQQLQ 102

[Close]

BLAST of CSPI06G02440 vs. ExPASy Swiss-Prot
Match: P0A4L1 (Thioredoxin 1 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=trxA PE=3 SV=2)

HSP 1 Score: 92.8 bits (229), Expect = 4.1e-18
Identity = 40/104 (38.46%), Postives = 68/104 (65.38%), Query Frame = 0


Query: 67  AKNQTFSSFDDLLANSDTPVLVDFYATWCGPCQFMVPILEQVSAALIDKVQVVKIDTEKY 126
           A   T S+F   + +SD PVLVDF+A WCGPC+ + P++++++     K++VVK++T++ 
Sbjct: 4   AAQVTDSTFKQEVLDSDVPVLVDFWAPWCGPCRMVAPVVDEIAQQYEGKIKVVKVNTDEN 63

Query: 127 PAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSL 171
           P +A +Y I ++PT ++FK G+ +D   GA+    L Q +E  L
Sbjct: 64  PQVASQYGIRSIPTLMIFKGGQKVDMVVGAVPKTTLSQTLEKHL 107

[Close]

BLAST of CSPI06G02440 vs. ExPASy TrEMBL
Match: A0A0A0K7X7 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G014850 PE=4 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 5.4e-90
Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0


Query: 1   MAASFSTSPYPILTSHRSNRLPAYHSSSSSLSFSSSLHLPLQLRRFPLANTRISPPSSSP 60
           MAASFSTSPYPILTSHRSNRLPAYHSSSSSLSFSSSLHLPLQLRRFPLANTRISPPSSSP
Sbjct: 1   MAASFSTSPYPILTSHRSNRLPAYHSSSSSLSFSSSLHLPLQLRRFPLANTRISPPSSSP 60

Query: 61  SFPVVKAKNQTFSSFDDLLANSDTPVLVDFYATWCGPCQFMVPILEQVSAALIDKVQVVK 120
           SFPVVKAKNQTFSSFDDLLANSDTPVLVDFYATWCGPCQFMVPILEQVSAALIDKVQVVK
Sbjct: 61  SFPVVKAKNQTFSSFDDLLANSDTPVLVDFYATWCGPCQFMVPILEQVSAALIDKVQVVK 120

Query: 121 IDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKVKQ 175
           IDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKVKQ
Sbjct: 121 IDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKVKQ 174

[Close]

BLAST of CSPI06G02440 vs. ExPASy TrEMBL
Match: A0A1S3CIC6 (thioredoxin-like protein slr0233 OS=Cucumis melo OX=3656 GN=LOC103501315 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 8.4e-83
Identity = 162/174 (93.10%), Postives = 167/174 (95.98%), Query Frame = 0


Query: 1   MAASFSTSPYPILTSHRSNRLPAYHSSSSSLSFSSSLHLPLQLRRFPLANTRISPPSSSP 60
           MAASFSTSPYP+LTSHRSNRLPAYHSSSS+LS SSSLHLPLQLRRF L NTRISPPS S 
Sbjct: 1   MAASFSTSPYPLLTSHRSNRLPAYHSSSSALSSSSSLHLPLQLRRFRLGNTRISPPSPSR 60

Query: 61  SFPVVKAKNQTFSSFDDLLANSDTPVLVDFYATWCGPCQFMVPILEQVSAALIDKVQVVK 120
           + P+VKAKNQTFSSFDDLLANSD PVLVDFYATWCGPCQFMVPILE+VSAALIDKVQVVK
Sbjct: 61  TLPLVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEKVSAALIDKVQVVK 120

Query: 121 IDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKVKQ 175
           IDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKVKQ
Sbjct: 121 IDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKVKQ 174

[Close]

BLAST of CSPI06G02440 vs. ExPASy TrEMBL
Match: A0A5D3BTP9 (Thioredoxin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G00410 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 8.4e-83
Identity = 162/174 (93.10%), Postives = 167/174 (95.98%), Query Frame = 0


Query: 1   MAASFSTSPYPILTSHRSNRLPAYHSSSSSLSFSSSLHLPLQLRRFPLANTRISPPSSSP 60
           MAASFSTSPYP+LTSHRSNRLPAYHSSSS+LS SSSLHLPLQLRRF L NTRISPPS S 
Sbjct: 1   MAASFSTSPYPLLTSHRSNRLPAYHSSSSALSSSSSLHLPLQLRRFRLGNTRISPPSPSR 60

Query: 61  SFPVVKAKNQTFSSFDDLLANSDTPVLVDFYATWCGPCQFMVPILEQVSAALIDKVQVVK 120
           + P+VKAKNQTFSSFDDLLANSD PVLVDFYATWCGPCQFMVPILE+VSAALIDKVQVVK
Sbjct: 61  TLPLVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEKVSAALIDKVQVVK 120

Query: 121 IDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKVKQ 175
           IDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKVKQ
Sbjct: 121 IDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKVKQ 174

[Close]

BLAST of CSPI06G02440 vs. ExPASy TrEMBL
Match: A0A6J1I964 (thioredoxin Y1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111472651 PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 1.0e-67
Identity = 143/174 (82.18%), Postives = 148/174 (85.06%), Query Frame = 0


Query: 1   MAASFSTSPYPILTSHRSNRLPAYHSSSSSLSFSSSLHLPLQLRRFPLANTRISPPSSSP 60
           MAAS STSPYP+LTS RSNR  A  SSSS L  SSSL LP+QLR   L N  IS PS S 
Sbjct: 1   MAASISTSPYPLLTSERSNRFAANDSSSSRLFSSSSLQLPVQLRCVRLGNCGISAPSRSR 60

Query: 61  SFPVVKAKNQTFSSFDDLLANSDTPVLVDFYATWCGPCQFMVPILEQVSAALIDKVQVVK 120
            FPVVKAKNQTFSSFDDLLANSD PVLVDFYATWCGPCQFMVPILE+VS AL D VQVVK
Sbjct: 61  IFPVVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEKVSDALSDTVQVVK 120

Query: 121 IDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKVKQ 175
           IDTEKYP IADKY+IEALPTFILFKDGKPLDRFEGALAA ELIQRIE+SLKVKQ
Sbjct: 121 IDTEKYPVIADKYKIEALPTFILFKDGKPLDRFEGALAAGELIQRIENSLKVKQ 174

[Close]

BLAST of CSPI06G02440 vs. ExPASy TrEMBL
Match: A0A6J1DH52 (thioredoxin Y2, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111020017 PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 1.0e-67
Identity = 144/175 (82.29%), Postives = 148/175 (84.57%), Query Frame = 0


Query: 1   MAASFSTSPYPILTSHRSNRLPAYHSSSSS-LSFSSSLHLPLQLRRFPLANTRISPPSSS 60
           MAAS STSPYP+LTS RSNR PA  SSSSS  S SSSLHLP Q R F L N  IS PS S
Sbjct: 1   MAASISTSPYPLLTSERSNRFPANDSSSSSRFSSSSSLHLPPQFRCFRLGNNGISAPSRS 60

Query: 61  PSFPVVKAKNQTFSSFDDLLANSDTPVLVDFYATWCGPCQFMVPILEQVSAALIDKVQVV 120
              PVVKAKNQTFSSFDDLLANSD PV VDFYATWCGPCQFMVPILE+VSA L D VQVV
Sbjct: 61  RILPVVKAKNQTFSSFDDLLANSDKPVFVDFYATWCGPCQFMVPILEKVSATLGDTVQVV 120

Query: 121 KIDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKVKQ 175
           KIDTEKYPAIADKY+IEALPTFILFKDGK LDRFEGAL AR+LIQRIEDSLKVKQ
Sbjct: 121 KIDTEKYPAIADKYKIEALPTFILFKDGKLLDRFEGALTARDLIQRIEDSLKVKQ 175

[Close]

BLAST of CSPI06G02440 vs. NCBI nr
Match: XP_004138379.1 (uncharacterized protein LOC101213340 [Cucumis sativus])

HSP 1 Score: 340.1 bits (871), Expect = 1.1e-89
Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0


Query: 1   MAASFSTSPYPILTSHRSNRLPAYHSSSSSLSFSSSLHLPLQLRRFPLANTRISPPSSSP 60
           MAASFSTSPYPILTSHRSNRLPAYHSSSSSLSFSSSLHLPLQLRRFPLANTRISPPSSSP
Sbjct: 1   MAASFSTSPYPILTSHRSNRLPAYHSSSSSLSFSSSLHLPLQLRRFPLANTRISPPSSSP 60

Query: 61  SFPVVKAKNQTFSSFDDLLANSDTPVLVDFYATWCGPCQFMVPILEQVSAALIDKVQVVK 120
           SFPVVKAKNQTFSSFDDLLANSDTPVLVDFYATWCGPCQFMVPILEQVSAALIDKVQVVK
Sbjct: 61  SFPVVKAKNQTFSSFDDLLANSDTPVLVDFYATWCGPCQFMVPILEQVSAALIDKVQVVK 120

Query: 121 IDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKVKQ 175
           IDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKVKQ
Sbjct: 121 IDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKVKQ 174

[Close]

BLAST of CSPI06G02440 vs. NCBI nr
Match: XP_008463079.1 (PREDICTED: thioredoxin-like protein slr0233 [Cucumis melo] >XP_016902975.1 PREDICTED: thioredoxin-like protein slr0233 [Cucumis melo] >KAA0035008.1 thioredoxin-like protein [Cucumis melo var. makuwa] >TYK02348.1 thioredoxin-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 316.2 bits (809), Expect = 1.7e-82
Identity = 162/174 (93.10%), Postives = 167/174 (95.98%), Query Frame = 0


Query: 1   MAASFSTSPYPILTSHRSNRLPAYHSSSSSLSFSSSLHLPLQLRRFPLANTRISPPSSSP 60
           MAASFSTSPYP+LTSHRSNRLPAYHSSSS+LS SSSLHLPLQLRRF L NTRISPPS S 
Sbjct: 1   MAASFSTSPYPLLTSHRSNRLPAYHSSSSALSSSSSLHLPLQLRRFRLGNTRISPPSPSR 60

Query: 61  SFPVVKAKNQTFSSFDDLLANSDTPVLVDFYATWCGPCQFMVPILEQVSAALIDKVQVVK 120
           + P+VKAKNQTFSSFDDLLANSD PVLVDFYATWCGPCQFMVPILE+VSAALIDKVQVVK
Sbjct: 61  TLPLVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEKVSAALIDKVQVVK 120

Query: 121 IDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKVKQ 175
           IDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKVKQ
Sbjct: 121 IDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKVKQ 174

[Close]

BLAST of CSPI06G02440 vs. NCBI nr
Match: XP_038884039.1 (thioredoxin-like protein slr0233 [Benincasa hispida])

HSP 1 Score: 296.6 bits (758), Expect = 1.4e-76
Identity = 156/174 (89.66%), Postives = 158/174 (90.80%), Query Frame = 0


Query: 1   MAASFSTSPYPILTSHRSNRLPAYHSSSSSLSFSSSLHLPLQLRRFPLANTRISPPSSSP 60
           MA S STS YP+LTS RSNRLPA  SSSS  S SSSLHLPLQLRR  L NTRIS PS S 
Sbjct: 1   MATSISTSAYPLLTSDRSNRLPANDSSSSRFSSSSSLHLPLQLRRVRLGNTRISAPSRSR 60

Query: 61  SFPVVKAKNQTFSSFDDLLANSDTPVLVDFYATWCGPCQFMVPILEQVSAALIDKVQVVK 120
           SFPVVKAKNQTFSSFDDLLANSD PVLVDFYATWCGPCQFMVPILEQVSAALIDKVQV+K
Sbjct: 61  SFPVVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEQVSAALIDKVQVIK 120

Query: 121 IDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKVKQ 175
           IDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKVKQ
Sbjct: 121 IDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKVKQ 174

[Close]

BLAST of CSPI06G02440 vs. NCBI nr
Match: XP_022974037.1 (thioredoxin Y1, chloroplastic-like [Cucurbita maxima] >XP_022974038.1 thioredoxin Y1, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 266.2 bits (679), Expect = 2.1e-67
Identity = 143/174 (82.18%), Postives = 148/174 (85.06%), Query Frame = 0


Query: 1   MAASFSTSPYPILTSHRSNRLPAYHSSSSSLSFSSSLHLPLQLRRFPLANTRISPPSSSP 60
           MAAS STSPYP+LTS RSNR  A  SSSS L  SSSL LP+QLR   L N  IS PS S 
Sbjct: 1   MAASISTSPYPLLTSERSNRFAANDSSSSRLFSSSSLQLPVQLRCVRLGNCGISAPSRSR 60

Query: 61  SFPVVKAKNQTFSSFDDLLANSDTPVLVDFYATWCGPCQFMVPILEQVSAALIDKVQVVK 120
            FPVVKAKNQTFSSFDDLLANSD PVLVDFYATWCGPCQFMVPILE+VS AL D VQVVK
Sbjct: 61  IFPVVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEKVSDALSDTVQVVK 120

Query: 121 IDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKVKQ 175
           IDTEKYP IADKY+IEALPTFILFKDGKPLDRFEGALAA ELIQRIE+SLKVKQ
Sbjct: 121 IDTEKYPVIADKYKIEALPTFILFKDGKPLDRFEGALAAGELIQRIENSLKVKQ 174

[Close]

BLAST of CSPI06G02440 vs. NCBI nr
Match: XP_022932802.1 (thioredoxin Y2, chloroplastic [Cucurbita moschata])

HSP 1 Score: 266.2 bits (679), Expect = 2.1e-67
Identity = 141/174 (81.03%), Postives = 148/174 (85.06%), Query Frame = 0


Query: 1   MAASFSTSPYPILTSHRSNRLPAYHSSSSSLSFSSSLHLPLQLRRFPLANTRISPPSSSP 60
           MAAS STSPYP+LTS RSNR     SSSS L FSSSL LP+QLR   L N  IS PS S 
Sbjct: 1   MAASISTSPYPLLTSERSNRFAVNDSSSSRLFFSSSLQLPVQLRCVRLGNCGISAPSRSR 60

Query: 61  SFPVVKAKNQTFSSFDDLLANSDTPVLVDFYATWCGPCQFMVPILEQVSAALIDKVQVVK 120
            FPVVKAKNQTFSSFDDLLANSD PVLVDFYATWCGPCQFMVPILE+VS AL D VQVVK
Sbjct: 61  IFPVVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEKVSDALSDTVQVVK 120

Query: 121 IDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKVKQ 175
           IDTEKYP IADKY+IEALPTFILFKDGKPLDRFEGA+AA ELIQRIE+SLK+KQ
Sbjct: 121 IDTEKYPVIADKYKIEALPTFILFKDGKPLDRFEGAVAAGELIQRIENSLKIKQ 174

[Close]

BLAST of CSPI06G02440 vs. TAIR 10
Match: AT1G76760.1 (thioredoxin Y1 )

HSP 1 Score: 187.2 bits (474), Expect = 1.1e-47
Identity = 102/172 (59.30%), Postives = 124/172 (72.09%), Query Frame = 0


Query: 4   SFSTSPYPILTSHRSNRLPAYHSSSSSLSFSSSLHLPLQLRRFPLANTRISPPSSSPSFP 63
           S S+S  P L S  S+ + A+ S S      S++     +RR    + +    SS+    
Sbjct: 5   SLSSSTVPSLNSKESSGVSAFASRS-----ISAVKFQFPVRRVRTGDLKFPSLSSTTRCT 64

Query: 64  V--VKAKNQTFSSFDDLLANSDTPVLVDFYATWCGPCQFMVPILEQVSAALIDKVQVVKI 123
              ++AK QTF SF+DLL NSD PVLVD+YATWCGPCQFMVPIL +VS  L DK+QVVKI
Sbjct: 65  PRRIEAKKQTFDSFEDLLVNSDKPVLVDYYATWCGPCQFMVPILNEVSETLKDKIQVVKI 124

Query: 124 DTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKVK 174
           DTEKYP+IA+KY+IEALPTFILFKDG+P DRFEGAL A++LIQRIEDSLKVK
Sbjct: 125 DTEKYPSIANKYKIEALPTFILFKDGEPCDRFEGALTAKQLIQRIEDSLKVK 171

[Close]

BLAST of CSPI06G02440 vs. TAIR 10
Match: AT1G43560.1 (thioredoxin Y2 )

HSP 1 Score: 182.6 bits (462), Expect = 2.8e-46
Identity = 99/156 (63.46%), Postives = 116/156 (74.36%), Query Frame = 0


Query: 22  PAYHSSSSSLSFSSSLHLPLQLRRFPLANTRISPPSSSPSF---PVVKAKNQTFSSFDDL 81
           P   +S+S     SS+ LP Q+RRF      +  PSSS  F    V  AK QTF+SFDDL
Sbjct: 16  PESSNSASPSRTLSSVRLPSQIRRF----GSVQSPSSSTRFAPLTVRAAKKQTFNSFDDL 75

Query: 82  LANSDTPVLVDFYATWCGPCQFMVPILEQVSAALIDKVQVVKIDTEKYPAIADKYRIEAL 141
           L NSD PVLVDFYATWCGPCQ MVPIL +VS  L D + VVKIDTEKYP++A+KY+IEAL
Sbjct: 76  LQNSDKPVLVDFYATWCGPCQLMVPILNEVSETLKDIIAVVKIDTEKYPSLANKYQIEAL 135

Query: 142 PTFILFKDGKPLDRFEGALAARELIQRIEDSLKVKQ 175
           PTFILFKDGK  DRFEGAL A +L++RIE+SL+VKQ
Sbjct: 136 PTFILFKDGKLWDRFEGALPANQLVERIENSLQVKQ 167

[Close]

BLAST of CSPI06G02440 vs. TAIR 10
Match: AT1G50320.1 (thioredoxin X )

HSP 1 Score: 85.1 bits (209), Expect = 6.0e-17
Identity = 43/100 (43.00%), Postives = 61/100 (61.00%), Query Frame = 0


Query: 73  SSFDDLLANSDTPVLVDFYATWCGPCQFMVPILEQVSAALIDKVQVVKIDTEKYPAIADK 132
           S F   +  S  PVLV+F ATWCGPC+ + P +E +S    DK+ +VKID +  P +  +
Sbjct: 77  SEFSSTVLESAQPVLVEFVATWCGPCKLIYPAMEALSQEYGDKLTIVKIDHDANPKLIAE 136

Query: 133 YRIEALPTFILFKDGK--PLDRFEGALAARELIQRIEDSL 171
           +++  LP FILFKDGK  P  R EGA+   +L + I+  L
Sbjct: 137 FKVYGLPHFILFKDGKEVPGSRREGAITKAKLKEYIDGLL 176

[Close]

BLAST of CSPI06G02440 vs. TAIR 10
Match: AT3G15360.1 (thioredoxin M-type 4 )

HSP 1 Score: 82.8 bits (203), Expect = 3.0e-16
Identity = 41/116 (35.34%), Postives = 68/116 (58.62%), Query Frame = 0


Query: 52  RISPPSSSPSFPVVKAKNQTFSSFDDLLANSDTPVLVDFYATWCGPCQFMVPILEQVSAA 111
           RI+  +   +   V+  N + S +   +  SD PVLV+F+A WCGPC+ + PI++Q++  
Sbjct: 73  RIACEAQDTTAAAVEVPNLSDSEWQTKVLESDVPVLVEFWAPWCGPCRMIHPIVDQLAKD 132

Query: 112 LIDKVQVVKIDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIE 168
              K +  KI+T++ P  A++Y I ++PT I+FK G+  D   GA+    L + IE
Sbjct: 133 FAGKFKFYKINTDESPNTANRYGIRSVPTVIIFKGGEKKDSIIGAVPRETLEKTIE 188

[Close]

BLAST of CSPI06G02440 vs. TAIR 10
Match: AT1G03680.1 (thioredoxin M-type 1 )

HSP 1 Score: 72.8 bits (177), Expect = 3.1e-13
Identity = 44/144 (30.56%), Postives = 78/144 (54.17%), Query Frame = 0


Query: 27  SSSSLSFSSSLHLPLQLRRFPLANTRISPPSSSPSFPVVKAKNQTFSSFDDLLANSDTPV 86
           S SSLS +S +    +LRR  +   +     ++   PVV       S++D L+  +D PV
Sbjct: 48  SLSSLSKNSRVS---RLRRGVICEAQ----DTATGIPVVND-----STWDSLVLKADEPV 107

Query: 87  LVDFYATWCGPCQFMVPILEQVSAALIDKVQVVKIDTEKYPAIADKYRIEALPTFILFKD 146
            VDF+A WCGPC+ + PI+ +++     + +  K++T++ PA   +Y + ++PT ++F +
Sbjct: 108 FVDFWAPWCGPCKMIDPIVNELAQKYAGQFKFYKLNTDESPATPGQYGVRSIPTIMIFVN 167

Query: 147 GKPLDRFEGALAARELIQRIEDSL 171
           G+  D   GA++   L   I   L
Sbjct: 168 GEKKDTIIGAVSKDTLATSINKFL 179

The following BLAST results are available for this feature:

BLAST of CSPI06G02440 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NPF9	1.6e-46	59.30	Thioredoxin Y1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g76760 PE=1 ...	[more]
Q8L7S9	3.9e-45	63.46	Thioredoxin Y2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g43560 PE=2 ...	[more]
Q5JMR9	3.8e-40	66.94	Thioredoxin Y, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g09...	[more]
P52232	2.3e-29	58.42	Thioredoxin-like protein slr0233 OS=Synechocystis sp. (strain PCC 6803 / Kazusa)...	[more]
P0A4L1	4.1e-18	38.46	Thioredoxin 1 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 ...	[more]

BLAST of CSPI06G02440 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K7X7	5.4e-90	100.00	Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G014850...	[more]
A0A1S3CIC6	8.4e-83	93.10	thioredoxin-like protein slr0233 OS=Cucumis melo OX=3656 GN=LOC103501315 PE=4 SV...	[more]
A0A5D3BTP9	8.4e-83	93.10	Thioredoxin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A6J1I964	1.0e-67	82.18	thioredoxin Y1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111472651 P...	[more]
A0A6J1DH52	1.0e-67	82.29	thioredoxin Y2, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC11102001...	[more]

BLAST of CSPI06G02440 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004138379.1	1.1e-89	100.00	uncharacterized protein LOC101213340 [Cucumis sativus]	[more]
XP_008463079.1	1.7e-82	93.10	PREDICTED: thioredoxin-like protein slr0233 [Cucumis melo] >XP_016902975.1 PREDI...	[more]
XP_038884039.1	1.4e-76	89.66	thioredoxin-like protein slr0233 [Benincasa hispida]	[more]
XP_022974037.1	2.1e-67	82.18	thioredoxin Y1, chloroplastic-like [Cucurbita maxima] >XP_022974038.1 thioredoxi...	[more]
XP_022932802.1	2.1e-67	81.03	thioredoxin Y2, chloroplastic [Cucurbita moschata]	[more]

BLAST of CSPI06G02440 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G76760.1	1.1e-47	59.30	thioredoxin Y1	[more]
AT1G43560.1	2.8e-46	63.46	thioredoxin Y2	[more]
AT1G50320.1	6.0e-17	43.00	thioredoxin X	[more]
AT3G15360.1	3.0e-16	35.34	thioredoxin M-type 4	[more]
AT1G03680.1	3.1e-13	30.56	thioredoxin M-type 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00421	THIOREDOXIN	coord: 134..145 score: 35.93 coord: 94..103 score: 55.39 coord: 86..94 score: 64.32
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 68..174 e-value: 5.9E-32 score: 111.8
None	No IPR available	PANTHER	PTHR45663	GEO12009P1	coord: 18..173
None	No IPR available	PANTHER	PTHR45663:SF15	THIOREDOXIN Y1, CHLOROPLASTIC	coord: 18..173
None	No IPR available	CDD	cd02947	TRX_family	coord: 73..167 e-value: 2.75853E-36 score: 119.585
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 70..167 e-value: 1.7E-28 score: 98.6
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 53..171 score: 16.803852
IPR005746	Thioredoxin	TIGRFAM	TIGR01068	TIGR01068	coord: 72..168 e-value: 4.2E-32 score: 108.3
IPR017937	Thioredoxin, conserved site	PROSITE	PS00194	THIOREDOXIN_1	coord: 87..105
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 71..171

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G02440.1	CSPI06G02440.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006662	glycerol ether metabolic process
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
molecular_function	GO:0015035	protein-disulfide reductase activity