CSPI06G00510 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI06G00510
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr6: 375021 .. 375251 (-)
RNA-Seq ExpressionCSPI06G00510
SyntenyCSPI06G00510
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGAGTGGTGAGAGACTCTGTAGCGATGGATTTGAAAGAATGTTAGAGGTGAGAAAGTGGTTATAAAATGGGATGATGATGATGATGTAGAAGAAGAAGAAGAAGAAGAAGAAGAAGCAATTTGATGAGAAACTTTACTCGGTCCACTTCTCTTTCTCTCGCCATTGCAATCGATTGCTTGAGGACGAAGTAGAAGGAGAAGAAGAAGTCAGCTGCGTTAATATTTAA

mRNA sequence

ATGGTGAGTGGTGAGAGACTCTGTAGCGATGGATTTGAAAGAATGTTAGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGCAATTTGATGAGAAACTTTACTCGGTCCACTTCTCTTTCTCTCGCCATTGCAATCGATTGCTTGAGGACGAAGTAGAAGGAGAAGAAGAAGTCAGCTGCGTTAATATTTAA

Coding sequence (CDS)

ATGGTGAGTGGTGAGAGACTCTGTAGCGATGGATTTGAAAGAATGTTAGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGCAATTTGATGAGAAACTTTACTCGGTCCACTTCTCTTTCTCTCGCCATTGCAATCGATTGCTTGAGGACGAAGTAGAAGGAGAAGAAGAAGTCAGCTGCGTTAATATTTAA

Protein sequence

MVSGERLCSDGFERMLEKKKKKKKKKQFDEKLYSVHFSFSRHCNRLLEDEVEGEEEVSCVNI*
Homology
[Close]
BLAST of CSPI06G00510 vs. ExPASy TrEMBL
Match: A0A0A0K7F8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G004510 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 4.1e-24
Identity = 61/62 (98.39%), Postives = 61/62 (98.39%), Query Frame = 0 

Query: 1  MVSGERLCSDGFERMLEKKKKKKKKKQFDEKLYSVHFSFSRHCNRLLEDEVEGEEEVSCV 60
          MVSGERLCSDGFERMLE KKKKKKKKQFDEKLYSVHFSFSRHCNRLLEDEVEGEEEVSCV
Sbjct: 1  MVSGERLCSDGFERMLE-KKKKKKKKQFDEKLYSVHFSFSRHCNRLLEDEVEGEEEVSCV 60

Query: 61 NI 63
          NI
Sbjct: 61 NI 61

[Close]
BLAST of CSPI06G00510 vs. NCBI nr
Match: KGN45660.1 (hypothetical protein Csa_005358 [Cucumis sativus])

HSP 1 Score: 119.8 bits (299), Expect = 8.6e-24
Identity = 61/62 (98.39%), Postives = 61/62 (98.39%), Query Frame = 0 

Query: 1  MVSGERLCSDGFERMLEKKKKKKKKKQFDEKLYSVHFSFSRHCNRLLEDEVEGEEEVSCV 60
          MVSGERLCSDGFERMLE KKKKKKKKQFDEKLYSVHFSFSRHCNRLLEDEVEGEEEVSCV
Sbjct: 1  MVSGERLCSDGFERMLE-KKKKKKKKQFDEKLYSVHFSFSRHCNRLLEDEVEGEEEVSCV 60

Query: 61 NI 63
          NI
Sbjct: 61 NI 61

The following BLAST results are available for this feature:
BLAST of CSPI06G00510 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI06G00510 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K7F84.1e-2498.39Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G004510 PE=4 SV=1[more]
BLAST of CSPI06G00510 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN45660.18.6e-2498.39hypothetical protein Csa_005358 [Cucumis sativus][more]
BLAST of CSPI06G00510 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI06G00510.1CSPI06G00510.1mRNA