CSPI05G31020 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTTTGAGATTGTTAAACCAAGTGAATACCTGGGACGAAGCTAGAAACAGGGTAATTAAATTGGTTGATGATCTTAAAGCTTCTTCTTTACTTCTAGAATCCAATTCAAGGGATAATCATGTTAAAATGCATGATATCGTTCGTGATGTGGCAATATACATTGCATCAAAGGAAGCTAATATGTCTACATTGAGCTATGGTTTCGGGCTGAGTGAATGGCAAGAAAAGGATAGACATGGATCCTATAGAGCAATCTTTGGAAACTGTCACAACTTCTACAACTTTCCTCAAAACTTAGAGTTTCCAAAACTTGAATTGTTGATATTAGATGGACATGATTGGAGGGGAGAAAAACTTCAAATTTGTTACTCTTTTTTTTGAAGGAATGAAAGAACTTAAAGTTTTGAACTTGTCAAGGATGTGTTTTCAAC ATGAGTTTGAGATTGTTAAACCAAGTGAATACCTGGGACGAAGCTAGAAACAGGGTAATTAAATTGGTTGATGATCTTAAAGCTTCTTCTTTACTTCTAGAATCCAATTCAAGGGATAATCATGTTAAAATGCATGATATCGTTCGTGATGTGGCAATATACATTGCATCAAAGGAAGCTAATATGTCTACATTGAGCTATGGTTTCGGGCTGAGTGAATGGCAAGAAAAGGATAGACATGGATCCTATAGAGCAATCTTTGGAAACTGTCACAACTTCTACAACTTTCCTCAAAACTTAGAGTTTCCAAAACTTGAATTGTTGATATTAGATGGACATGATTGGAGGGGAGAAAAACTTCAAATTTGTTACTCTTTTTTTTGAAGGAATGAAAGAACTTAAAGTTTTGAACTTGTCAAGGATGTGTTTTCAAC ATGAGTTTGAGATTGTTAAACCAAGTGAATACCTGGGACGAAGCTAGAAACAGGGTAATTAAATTGGTTGATGATCTTAAAGCTTCTTCTTTACTTCTAGAATCCAATTCAAGGGATAATCATGTTAAAATGCATGATATCGTTCGTGATGTGGCAATATACATTGCATCAAAGGAAGCTAATATGTCTACATTGAGCTATGGTTTCGGGCTGAGTGAATGGCAAGAAAAGGATAGACATGGATCCTATAGAGCAATCTTTGGAAACTGTCACAACTTCTACAACTTTCCTCAAAACTTAGAGTTTCCAAAACTTGAATTGTTGATATTAGATGGACATGATTGGAGGGGAGAAAAACTTCAAATTTGTTACTCTTTTTTTTGA MSLRLLNQVNTWDEARNRVIKLVDDLKASSLLLESNSRDNHVKMHDIVRDVAIYIASKEANMSTLSYGFGLSEWQEKDRHGSYRAIFGNCHNFYNFPQNLEFPKLELLILDGHDWRGEKLQICYSFF* Homology
BLAST of CSPI05G31020 vs. ExPASy Swiss-Prot
Match: O81825 (Probable disease resistance protein At4g27220 OS=Arabidopsis thaliana OX=3702 GN=At4g27220 PE=2 SV=1) HSP 1 Score: 46.2 bits (108), Expect = 3.2e-04 Identity = 36/112 (32.14%), Postives = 58/112 (51.79%), Query Frame = 0
BLAST of CSPI05G31020 vs. ExPASy Swiss-Prot
Match: Q9T048 (Disease resistance protein At4g27190 OS=Arabidopsis thaliana OX=3702 GN=At4g27190 PE=2 SV=1) HSP 1 Score: 45.8 bits (107), Expect = 4.2e-04 Identity = 34/117 (29.06%), Postives = 62/117 (52.99%), Query Frame = 0
BLAST of CSPI05G31020 vs. ExPASy TrEMBL
Match: A0A6J1DQJ3 (probable disease resistance protein At4g27220 OS=Momordica charantia OX=3673 GN=LOC111022191 PE=4 SV=1) HSP 1 Score: 157.9 bits (398), Expect = 2.8e-35 Identity = 79/129 (61.24%), Postives = 100/129 (77.52%), Query Frame = 0
BLAST of CSPI05G31020 vs. ExPASy TrEMBL
Match: A0A6J1CPP4 (probable disease resistance protein At4g27220 OS=Momordica charantia OX=3673 GN=LOC111013433 PE=4 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 3.4e-33 Identity = 76/129 (58.91%), Postives = 94/129 (72.87%), Query Frame = 0
BLAST of CSPI05G31020 vs. ExPASy TrEMBL
Match: A0A5D3BQI3 (Disease resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold38G00050 PE=4 SV=1) HSP 1 Score: 150.6 bits (379), Expect = 4.5e-33 Identity = 76/131 (58.02%), Postives = 103/131 (78.63%), Query Frame = 0
BLAST of CSPI05G31020 vs. ExPASy TrEMBL
Match: A0A1S3CHN4 (disease resistance protein At4g27190-like OS=Cucumis melo OX=3656 GN=LOC103501064 PE=4 SV=1) HSP 1 Score: 150.6 bits (379), Expect = 4.5e-33 Identity = 76/131 (58.02%), Postives = 103/131 (78.63%), Query Frame = 0
BLAST of CSPI05G31020 vs. ExPASy TrEMBL
Match: A0A0A0LTN4 (NB-ARC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G433370 PE=4 SV=1) HSP 1 Score: 149.8 bits (377), Expect = 7.6e-33 Identity = 77/131 (58.78%), Postives = 102/131 (77.86%), Query Frame = 0
BLAST of CSPI05G31020 vs. NCBI nr
Match: KAE8649002.1 (hypothetical protein Csa_008059 [Cucumis sativus]) HSP 1 Score: 265.4 bits (677), Expect = 2.6e-67 Identity = 126/127 (99.21%), Postives = 126/127 (99.21%), Query Frame = 0
BLAST of CSPI05G31020 vs. NCBI nr
Match: XP_038890209.1 (probable disease resistance protein At4g27220 [Benincasa hispida]) HSP 1 Score: 256.1 bits (653), Expect = 1.6e-64 Identity = 122/127 (96.06%), Postives = 122/127 (96.06%), Query Frame = 0
BLAST of CSPI05G31020 vs. NCBI nr
Match: XP_022155051.1 (probable disease resistance protein At4g27220 [Momordica charantia]) HSP 1 Score: 157.9 bits (398), Expect = 5.8e-35 Identity = 79/129 (61.24%), Postives = 100/129 (77.52%), Query Frame = 0
BLAST of CSPI05G31020 vs. NCBI nr
Match: XP_038902150.1 (disease resistance protein At4g27190-like [Benincasa hispida]) HSP 1 Score: 154.5 bits (389), Expect = 6.4e-34 Identity = 77/130 (59.23%), Postives = 101/130 (77.69%), Query Frame = 0
BLAST of CSPI05G31020 vs. NCBI nr
Match: XP_022143564.1 (probable disease resistance protein At4g27220 [Momordica charantia]) HSP 1 Score: 151.0 bits (380), Expect = 7.0e-33 Identity = 76/129 (58.91%), Postives = 94/129 (72.87%), Query Frame = 0
BLAST of CSPI05G31020 vs. TAIR 10
Match: AT4G27220.1 (NB-ARC domain-containing disease resistance protein ) HSP 1 Score: 46.2 bits (108), Expect = 2.3e-05 Identity = 36/112 (32.14%), Postives = 58/112 (51.79%), Query Frame = 0
BLAST of CSPI05G31020 vs. TAIR 10
Match: AT4G27190.1 (NB-ARC domain-containing disease resistance protein ) HSP 1 Score: 45.8 bits (107), Expect = 3.0e-05 Identity = 34/117 (29.06%), Postives = 62/117 (52.99%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|