CSPI05G28400 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI05G28400
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionFerredoxin-thioredoxin reductase catalytic chain, chloroplastic
LocationChr5: 26837172 .. 26839639 (-)
RNA-Seq ExpressionCSPI05G28400
SyntenyCSPI05G28400
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGATATTTTGCAAATGAGTGGAGGGCACCCGGTAATGGCATCCTCCAGAAAATTCACTTCTATCAATCATCTTCATCTCCCTAATTCAACATTCTTTTACCCAAAAAAAACAGAAAAACTATAGAAAAATCCTCAAGATCCTAATGATTCTACAAGCTTCATCCTTCAATATCGCCGTTCCACTCTACGGTTCCTCCCTCGGATGTTCCCGTCACCGCCATGTTGTACGAGCTCAAGGTAACTATAGTTCAATTTCTTGAAACAGATTGTAAATCTTCTATTTCTCTGTTGATTGATTGATGTAGAGGAGATTATTTCTTACTTGTTATTTCAGCGGAACCATCCGAGAAGTCGGTTGAAATAATGAGGAAATTCTCGGAGCAGTATGCCCGTAAGTCAGGAACCTATTTCTGTGTAGACAAGGGGGTTACTGCTGTTGTAATCAAGGTTCTTTTCTCAGATTTTACTTCTGGTATTAATTAATATCCAATTGTTGTTTATTCATTGAATTTCGTTCTTTTTTTCCTGCTCTGGTTCTTTCTTTAGTAATGAAGTTGCTTGAGTGTTTTAGATGATTATGTTTATCTGTTGACGTTTGTGGAAACATTTCATTGATCAATCGTAATTGATAAGTTCTTTTCATGAACAACAATTTATTGTTAGTTAGTGAAGCAGTTGAATGTAAGAAACTTCGATATGTCTGCGCTCTCACCGGTGGATGTTAACTTGAATAAAATTTGTTTGCCTACTACAGTCGTTTAAGAGATTTTCTTGACATTGCTGATGATCTTTATAATCGTAGCTTTTAGTTCTACTATTGGAAGTTGATTTACTGGCTTAATAACCTGAGATATTACTTGTAAATTTTTGGACGTTACCTTGTTGGAATTGTGGATTTCTTTTATTTGATTATTTCTTTAGTGGTACCTTTTATTAATTGATTGAATGTCGTTGATTTGTAATTAGTGTAAGAGAAGCTCATGTTAGATCTAAACAGGGACTGGCAGATCACAAAGATACACTGGGAGCACCACTTTGTCCTTGTCGGTCAGTGTTTCTCACTGGAACTAATGGTGGTTCAAACATTCTTGAATGAAAATTCAAATAGTTTGATGATTTTTTTTTTTTTTTTGGTAGGCATTATGATGACAAACCTGCTGAGGTTGCACAAGGTTTTTGGAACTGTCCATGTGTGCCAATGAGAGAGAGGTATAATATGTACTTATAGCTAATGACTGATGTGCAAAAATTGTTAAAAGATAGCATTAGGAAATCTATTTTTCCTGATTGGAATTCGTAAAATTATGGGCATGCCTCACTGACTTATACGTTATAAACTTCAACTTTGCTGTCACTTTAATTATCGACCAACACAATCTTCTGCATTATGATTATTCAGCTTGATAAGATTTGACCTTATAAATTAGAAAGGAAAAGAGGAAGCGGTGGGAGTTTATCGGAATTTATCTTATTTTAATTTACTTTTGAGATGATCAGTGCTAAGATTTACATTTATAGGTTATTGAACTTGAAAAAATACCTCTGAGTCCATAACTAACCATTTCGCACATGAAGAGTAGGGATTTACATTCATGAAGTGGCTTAGAATTATTCCCATGGTAATCTGGTTAATGATATTGGTACTCAGTTAGTCACGCATAACCAAGCTGTTCACTTTAGCAAGGTGGCTTTTAGGTCGGTTTTGTGTTATATTTGATAAAGGAAAGTTACTATTTTCCCGAGAATAACGTGGTTGCTGGCTTGTGTTTAAGGAAACAATGAAATGTAAACACTATATTTTTATTCCATATCAGACGCATGTGGTCTGAAAATTAAGTCTTGCTTGGCAGGAAAGAGTGTCACTGCATGCTTTTCCTGACTCCGGAAAATGACTTTGCCGGCAATGATCAGGTAATTCTTGTACATTAATCTTGACCTCATAGGTTGGACCCTGCTACTTATAATTTACATAGGAATCTCAGTGAAATAACTGCAAAAAGGCGATTTAAATAATGCTATGCTATTATTATCATTATTTAGTTTGCATATGTTGCAATCATCCACGGTTCCTATTATCAATAATTCTTTCATGCTCTCGTTTGATTTTTAAATTTTTTTTTTTTTCCACTCCGCTTTTGTGCAGGCAATCTCTTTGGAAGATATCAGGGCAACAACAGCAAACATGTAACCCCAAATTACCACTTGTTATTTTTCATTGAACAGTAATTCATATTGTGGTTATGGCTAAAACAGGTGGAAATATACAAGTATTAAATGAATGTGTATGTAACAGTAACTCTATATGCTGATGAGATAATGAATGGTTTCCCATATCTGCTTCTGACAAATGATTGGATTTCATTTCACCAAATACTGTTTGGGTTGACTTTCTAAGATTTTTTACACACTTATGAAGTCAATCTAAAGATATATTGAATCTCCTATTGTTATATAAGTTTTGATGGTCC

mRNA sequence

TGATATTTTGCAAATGAGTGGAGGGCACCCGGTAATGGCATCCTCCAGAAAATTCACTTCTATCAATCATCTTCATCTCCCTAATTCAACATTCTTTTACCCAAAAAAAACAGAAAAACTATAGAAAAATCCTCAAGATCCTAATGATTCTACAAGCTTCATCCTTCAATATCGCCGTTCCACTCTACGGTTCCTCCCTCGGATGTTCCCGTCACCGCCATGTTGTACGAGCTCAAGCGGAACCATCCGAGAAGTCGGTTGAAATAATGAGGAAATTCTCGGAGCAGTATGCCCGTAAGTCAGGAACCTATTTCTGTGTAGACAAGGGGGTTACTGCTGTTGTAATCAAGGGACTGGCAGATCACAAAGATACACTGGGAGCACCACTTTGTCCTTGTCGGCATTATGATGACAAACCTGCTGAGGTTGCACAAGGTTTTTGGAACTGTCCATGTGTGCCAATGAGAGAGAGGAAAGAGTGTCACTGCATGCTTTTCCTGACTCCGGAAAATGACTTTGCCGGCAATGATCAGGCAATCTCTTTGGAAGATATCAGGGCAACAACAGCAAACATGTAACCCCAAATTACCACTTGTTATTTTTCATTGAACAGTAATTCATATTGTGGTTATGGCTAAAACAGGTGGAAATATACAAGTATTAAATGAATGTGTATGTAACAGTAACTCTATATGCTGATGAGATAATGAATGGTTTCCCATATCTGCTTCTGACAAATGATTGGATTTCATTTCACCAAATACTGTTTGGGTTGACTTTCTAAGATTTTTTACACACTTATGAAGTCAATCTAAAGATATATTGAATCTCCTATTGTTATATAAGTTTTGATGGTCC

Coding sequence (CDS)

ATGATTCTACAAGCTTCATCCTTCAATATCGCCGTTCCACTCTACGGTTCCTCCCTCGGATGTTCCCGTCACCGCCATGTTGTACGAGCTCAAGCGGAACCATCCGAGAAGTCGGTTGAAATAATGAGGAAATTCTCGGAGCAGTATGCCCGTAAGTCAGGAACCTATTTCTGTGTAGACAAGGGGGTTACTGCTGTTGTAATCAAGGGACTGGCAGATCACAAAGATACACTGGGAGCACCACTTTGTCCTTGTCGGCATTATGATGACAAACCTGCTGAGGTTGCACAAGGTTTTTGGAACTGTCCATGTGTGCCAATGAGAGAGAGGAAAGAGTGTCACTGCATGCTTTTCCTGACTCCGGAAAATGACTTTGCCGGCAATGATCAGGCAATCTCTTTGGAAGATATCAGGGCAACAACAGCAAACATGTAA

Protein sequence

MILQASSFNIAVPLYGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM*
Homology
[Close]
BLAST of CSPI05G28400 vs. ExPASy Swiss-Prot
Match: O49856 (Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic OS=Glycine max OX=3847 GN=FTRC PE=2 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 3.7e-65
Identity = 115/144 (79.86%), Postives = 128/144 (88.89%), Query Frame = 0 

Query: 1   MILQASSFNIAVPLYGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVD 60
           M  QAS+F +AVP   +     R+  VVRAQAEPS+KSVEIMRKFSEQYARKSGTYFCVD
Sbjct: 1   MTTQASTFAVAVPSVATPFRRHRNPFVVRAQAEPSDKSVEIMRKFSEQYARKSGTYFCVD 60

Query: 61  KGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMRERKECHCMLFLT 120
           KGVT+VVIKGLADHKDTLGAPLCPCRHYDDK AEVAQGFWNCPCVPMRERKECHCMLFLT
Sbjct: 61  KGVTSVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFWNCPCVPMRERKECHCMLFLT 120

Query: 121 PENDFAGNDQAISLEDIRATTANM 145
           P+NDFAGN+Q I+L++I+ +TANM
Sbjct: 121 PDNDFAGNEQTITLDEIKESTANM 144

[Close]
BLAST of CSPI05G28400 vs. ExPASy Swiss-Prot
Match: Q9SJ89 (Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FTRC PE=1 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 1.1e-58
Identity = 108/146 (73.97%), Postives = 120/146 (82.19%), Query Frame = 0 

Query: 1   MILQA--SSFNIAVPLYGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFC 60
           M LQA   SF       G +   S  R V+RA+ EPSEKSVEIMRKFSEQYAR+SGTYFC
Sbjct: 1   MNLQAVSCSFGFLSSPLGVTPRTSFRRFVIRAKTEPSEKSVEIMRKFSEQYARRSGTYFC 60

Query: 61  VDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMRERKECHCMLF 120
           VDKGVT+VVIKGLA+HKD+ GAPLCPCRHYDDK AEV QGFWNCPCVPMRERKECHCMLF
Sbjct: 61  VDKGVTSVVIKGLAEHKDSYGAPLCPCRHYDDKAAEVGQGFWNCPCVPMRERKECHCMLF 120

Query: 121 LTPENDFAGNDQAISLEDIRATTANM 145
           LTP+NDFAG DQ I+ ++I+ TTANM
Sbjct: 121 LTPDNDFAGKDQTITSDEIKETTANM 146

[Close]
BLAST of CSPI05G28400 vs. ExPASy Swiss-Prot
Match: P41348 (Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic OS=Spinacia oleracea OX=3562 GN=FTRC PE=1 SV=2)

HSP 1 Score: 221.5 bits (563), Expect = 6.3e-57
Identity = 98/139 (70.50%), Postives = 115/139 (82.73%), Query Frame = 0 

Query: 6   SSFNIAVPLYGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTA 65
           +S   + P+   +    R   V+RAQA+PS+KS+E+MRKFSEQ+ RKS TYFCVDK VTA
Sbjct: 6   ASIAYSFPISSPAASPRRFSRVIRAQADPSDKSMEVMRKFSEQFCRKSDTYFCVDKSVTA 65

Query: 66  VVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMRERKECHCMLFLTPENDF 125
           VVIKGLADH+DTLGAPLCPCRHYDDK AE  QGFWNCPCVPMRERKECHCMLFLTP+NDF
Sbjct: 66  VVIKGLADHRDTLGAPLCPCRHYDDKEAEAKQGFWNCPCVPMRERKECHCMLFLTPDNDF 125

Query: 126 AGNDQAISLEDIRATTANM 145
           AG +Q I+L++IR  T+NM
Sbjct: 126 AGKEQTITLDEIREVTSNM 144

[Close]
BLAST of CSPI05G28400 vs. ExPASy Swiss-Prot
Match: P41349 (Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic OS=Spinacia oleracea OX=3562 PE=2 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 6.3e-57
Identity = 99/122 (81.15%), Postives = 110/122 (90.16%), Query Frame = 0 

Query: 23  RHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPL 82
           R + V+ ++ EPS+KSVEIMRKFSEQYARKSGTYFCVDKGVT+VVIKGLA+HKD+LGAPL
Sbjct: 27  RPQCVILSKVEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTSVVIKGLAEHKDSLGAPL 86

Query: 83  CPCRHYDDKPAEVAQGFWNCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTA 142
           CPCR+YDDK AE  QGFWNCPCVPMRERKECHCMLFLTPENDFAG DQ I L++IR  TA
Sbjct: 87  CPCRYYDDKAAEATQGFWNCPCVPMRERKECHCMLFLTPENDFAGKDQTIGLDEIREVTA 146

Query: 143 NM 145
           NM
Sbjct: 147 NM 148

[Close]
BLAST of CSPI05G28400 vs. ExPASy Swiss-Prot
Match: P41347 (Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic OS=Zea mays OX=4577 GN=FTRC PE=2 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 5.5e-53
Identity = 99/134 (73.88%), Postives = 111/134 (82.84%), Query Frame = 0 

Query: 13  PLYGSSLGCSRHRHVVRAQA----EPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVI 72
           PL  ++ G  R R  VRAQA      ++KSVE+MRKFSEQYAR+S T+FC DK VTAVVI
Sbjct: 18  PLSTATRGRPR-RCAVRAQAAGADASNDKSVEVMRKFSEQYARRSNTFFCADKTVTAVVI 77

Query: 73  KGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMRERKECHCMLFLTPENDFAGN 132
           KGLADH+DTLGAPLCPCRHYDDK AEVAQGFWNCPCVPMRERKECHCMLFLTP+NDFAG 
Sbjct: 78  KGLADHRDTLGAPLCPCRHYDDKAAEVAQGFWNCPCVPMRERKECHCMLFLTPDNDFAGK 137

Query: 133 DQAISLEDIRATTA 143
           DQ IS E+I+  T+
Sbjct: 138 DQVISFEEIKEATS 150

[Close]
BLAST of CSPI05G28400 vs. ExPASy TrEMBL
Match: A0A0A0KTZ8 (Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa_5G631540 PE=3 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 7.2e-80
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0 

Query: 1   MILQASSFNIAVPLYGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVD 60
           MILQASSFNIAVPLYGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVD
Sbjct: 1   MILQASSFNIAVPLYGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVD 60

Query: 61  KGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMRERKECHCMLFLT 120
           KGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMRERKECHCMLFLT
Sbjct: 61  KGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMRERKECHCMLFLT 120

Query: 121 PENDFAGNDQAISLEDIRATTANM 145
           PENDFAGNDQAISLEDIRATTANM
Sbjct: 121 PENDFAGNDQAISLEDIRATTANM 144

[Close]
BLAST of CSPI05G28400 vs. ExPASy TrEMBL
Match: A0A5A7T273 (Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold808G00370 PE=3 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 7.9e-79
Identity = 143/144 (99.31%), Postives = 143/144 (99.31%), Query Frame = 0 

Query: 1   MILQASSFNIAVPLYGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVD 60
           MILQASSFNIAVPL GSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVD
Sbjct: 1   MILQASSFNIAVPLSGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVD 60

Query: 61  KGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMRERKECHCMLFLT 120
           KGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMRERKECHCMLFLT
Sbjct: 61  KGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMRERKECHCMLFLT 120

Query: 121 PENDFAGNDQAISLEDIRATTANM 145
           PENDFAGNDQAISLEDIRATTANM
Sbjct: 121 PENDFAGNDQAISLEDIRATTANM 144

[Close]
BLAST of CSPI05G28400 vs. ExPASy TrEMBL
Match: A0A1S3C819 (Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103498045 PE=3 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 7.9e-79
Identity = 143/144 (99.31%), Postives = 143/144 (99.31%), Query Frame = 0 

Query: 1   MILQASSFNIAVPLYGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVD 60
           MILQASSFNIAVPL GSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVD
Sbjct: 1   MILQASSFNIAVPLSGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVD 60

Query: 61  KGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMRERKECHCMLFLT 120
           KGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMRERKECHCMLFLT
Sbjct: 61  KGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMRERKECHCMLFLT 120

Query: 121 PENDFAGNDQAISLEDIRATTANM 145
           PENDFAGNDQAISLEDIRATTANM
Sbjct: 121 PENDFAGNDQAISLEDIRATTANM 144

[Close]
BLAST of CSPI05G28400 vs. ExPASy TrEMBL
Match: A0A6J1JZ73 (Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111489601 PE=3 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 2.4e-75
Identity = 139/144 (96.53%), Postives = 139/144 (96.53%), Query Frame = 0 

Query: 1   MILQASSFNIAVPLYGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVD 60
           MI QASSFNIAVPL GS LG SRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVD
Sbjct: 1   MIPQASSFNIAVPLSGSPLGHSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVD 60

Query: 61  KGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMRERKECHCMLFLT 120
           KGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMRERKECHCMLFLT
Sbjct: 61  KGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMRERKECHCMLFLT 120

Query: 121 PENDFAGNDQAISLEDIRATTANM 145
           PENDFAG DQAISLEDIRATTANM
Sbjct: 121 PENDFAGTDQAISLEDIRATTANM 144

[Close]
BLAST of CSPI05G28400 vs. ExPASy TrEMBL
Match: A0A6J1FGU2 (Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111445554 PE=3 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 2.4e-75
Identity = 139/144 (96.53%), Postives = 139/144 (96.53%), Query Frame = 0 

Query: 1   MILQASSFNIAVPLYGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVD 60
           MI QASSFNIAVPL GS LG SRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVD
Sbjct: 1   MIPQASSFNIAVPLSGSPLGHSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVD 60

Query: 61  KGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMRERKECHCMLFLT 120
           KGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMRERKECHCMLFLT
Sbjct: 61  KGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMRERKECHCMLFLT 120

Query: 121 PENDFAGNDQAISLEDIRATTANM 145
           PENDFAG DQAISLEDIRATTANM
Sbjct: 121 PENDFAGTDQAISLEDIRATTANM 144

[Close]
BLAST of CSPI05G28400 vs. NCBI nr
Match: XP_004142346.1 (ferredoxin-thioredoxin reductase catalytic chain, chloroplastic [Cucumis sativus] >KGN52404.1 hypothetical protein Csa_008366 [Cucumis sativus])

HSP 1 Score: 306.2 bits (783), Expect = 1.5e-79
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0 

Query: 1   MILQASSFNIAVPLYGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVD 60
           MILQASSFNIAVPLYGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVD
Sbjct: 1   MILQASSFNIAVPLYGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVD 60

Query: 61  KGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMRERKECHCMLFLT 120
           KGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMRERKECHCMLFLT
Sbjct: 61  KGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMRERKECHCMLFLT 120

Query: 121 PENDFAGNDQAISLEDIRATTANM 145
           PENDFAGNDQAISLEDIRATTANM
Sbjct: 121 PENDFAGNDQAISLEDIRATTANM 144

[Close]
BLAST of CSPI05G28400 vs. NCBI nr
Match: XP_008458720.1 (PREDICTED: ferredoxin-thioredoxin reductase catalytic chain, chloroplastic [Cucumis melo] >KAA0037470.1 ferredoxin-thioredoxin reductase catalytic chain [Cucumis melo var. makuwa] >TYK01946.1 ferredoxin-thioredoxin reductase catalytic chain [Cucumis melo var. makuwa])

HSP 1 Score: 302.8 bits (774), Expect = 1.6e-78
Identity = 143/144 (99.31%), Postives = 143/144 (99.31%), Query Frame = 0 

Query: 1   MILQASSFNIAVPLYGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVD 60
           MILQASSFNIAVPL GSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVD
Sbjct: 1   MILQASSFNIAVPLSGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVD 60

Query: 61  KGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMRERKECHCMLFLT 120
           KGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMRERKECHCMLFLT
Sbjct: 61  KGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMRERKECHCMLFLT 120

Query: 121 PENDFAGNDQAISLEDIRATTANM 145
           PENDFAGNDQAISLEDIRATTANM
Sbjct: 121 PENDFAGNDQAISLEDIRATTANM 144

[Close]
BLAST of CSPI05G28400 vs. NCBI nr
Match: XP_038891226.1 (ferredoxin-thioredoxin reductase catalytic chain, chloroplastic [Benincasa hispida])

HSP 1 Score: 297.7 bits (761), Expect = 5.3e-77
Identity = 141/144 (97.92%), Postives = 141/144 (97.92%), Query Frame = 0 

Query: 1   MILQASSFNIAVPLYGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVD 60
           MILQASSFNIAVPL GS L CSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVD
Sbjct: 1   MILQASSFNIAVPLSGSPLRCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVD 60

Query: 61  KGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMRERKECHCMLFLT 120
           KGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMRERKECHCMLFLT
Sbjct: 61  KGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMRERKECHCMLFLT 120

Query: 121 PENDFAGNDQAISLEDIRATTANM 145
           PENDFAGNDQAISLEDIRATTANM
Sbjct: 121 PENDFAGNDQAISLEDIRATTANM 144

[Close]
BLAST of CSPI05G28400 vs. NCBI nr
Match: XP_022939771.1 (ferredoxin-thioredoxin reductase catalytic chain, chloroplastic-like [Cucurbita moschata] >XP_022993680.1 ferredoxin-thioredoxin reductase catalytic chain, chloroplastic-like [Cucurbita maxima] >XP_023550763.1 ferredoxin-thioredoxin reductase catalytic chain, chloroplastic-like [Cucurbita pepo subsp. pepo] >KAG6578622.1 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 291.2 bits (744), Expect = 4.9e-75
Identity = 139/144 (96.53%), Postives = 139/144 (96.53%), Query Frame = 0 

Query: 1   MILQASSFNIAVPLYGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVD 60
           MI QASSFNIAVPL GS LG SRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVD
Sbjct: 1   MIPQASSFNIAVPLSGSPLGHSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVD 60

Query: 61  KGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMRERKECHCMLFLT 120
           KGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMRERKECHCMLFLT
Sbjct: 61  KGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMRERKECHCMLFLT 120

Query: 121 PENDFAGNDQAISLEDIRATTANM 145
           PENDFAG DQAISLEDIRATTANM
Sbjct: 121 PENDFAGTDQAISLEDIRATTANM 144

[Close]
BLAST of CSPI05G28400 vs. NCBI nr
Match: XP_022989856.1 (ferredoxin-thioredoxin reductase catalytic chain, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 284.3 bits (726), Expect = 6.0e-73
Identity = 134/144 (93.06%), Postives = 137/144 (95.14%), Query Frame = 0 

Query: 1   MILQASSFNIAVPLYGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVD 60
           MILQASSFNIAVPL GSS G SRH HVVRAQ EPS+KSVEIMRKFSEQYARKSGTYFCVD
Sbjct: 1   MILQASSFNIAVPLSGSSTGRSRHSHVVRAQGEPSDKSVEIMRKFSEQYARKSGTYFCVD 60

Query: 61  KGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMRERKECHCMLFLT 120
           KGVTAVVIKGLADHKDTLGAPLCPCRHYDDK AEVAQGFWNCPCVPMRERKECHCMLFLT
Sbjct: 61  KGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFWNCPCVPMRERKECHCMLFLT 120

Query: 121 PENDFAGNDQAISLEDIRATTANM 145
           PENDFAGNDQ I+LEDI+ATTANM
Sbjct: 121 PENDFAGNDQVITLEDIKATTANM 144

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BLAST of CSPI05G28400 vs. TAIR 10
Match: AT2G04700.1 (ferredoxin thioredoxin reductase catalytic beta chain family protein )

HSP 1 Score: 227.3 bits (578), Expect = 8.2e-60
Identity = 108/146 (73.97%), Postives = 120/146 (82.19%), Query Frame = 0 

Query: 1   MILQA--SSFNIAVPLYGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFC 60
           M LQA   SF       G +   S  R V+RA+ EPSEKSVEIMRKFSEQYAR+SGTYFC
Sbjct: 1   MNLQAVSCSFGFLSSPLGVTPRTSFRRFVIRAKTEPSEKSVEIMRKFSEQYARRSGTYFC 60

Query: 61  VDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMRERKECHCMLF 120
           VDKGVT+VVIKGLA+HKD+ GAPLCPCRHYDDK AEV QGFWNCPCVPMRERKECHCMLF
Sbjct: 61  VDKGVTSVVIKGLAEHKDSYGAPLCPCRHYDDKAAEVGQGFWNCPCVPMRERKECHCMLF 120

Query: 121 LTPENDFAGNDQAISLEDIRATTANM 145
           LTP+NDFAG DQ I+ ++I+ TTANM
Sbjct: 121 LTPDNDFAGKDQTITSDEIKETTANM 146

The following BLAST results are available for this feature:
BLAST of CSPI05G28400 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O498563.7e-6579.86Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic OS=Glycine max O... [more]
Q9SJ891.1e-5873.97Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic OS=Arabidopsis t... [more]
P413486.3e-5770.50Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic OS=Spinacia oler... [more]
P413496.3e-5781.15Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic OS=Spinacia oler... [more]
P413475.5e-5373.88Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic OS=Zea mays OX=4... [more]
BLAST of CSPI05G28400 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KTZ87.2e-80100.00Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic OS=Cucumis sativ... [more]
A0A5A7T2737.9e-7999.31Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic OS=Cucumis melo ... [more]
A0A1S3C8197.9e-7999.31Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic OS=Cucumis melo ... [more]
A0A6J1JZ732.4e-7596.53Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic OS=Cucurbita max... [more]
A0A6J1FGU22.4e-7596.53Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic OS=Cucurbita mos... [more]
BLAST of CSPI05G28400 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004142346.11.5e-79100.00ferredoxin-thioredoxin reductase catalytic chain, chloroplastic [Cucumis sativus... [more]
XP_008458720.11.6e-7899.31PREDICTED: ferredoxin-thioredoxin reductase catalytic chain, chloroplastic [Cucu... [more]
XP_038891226.15.3e-7797.92ferredoxin-thioredoxin reductase catalytic chain, chloroplastic [Benincasa hispi... [more]
XP_022939771.14.9e-7596.53ferredoxin-thioredoxin reductase catalytic chain, chloroplastic-like [Cucurbita ... [more]
XP_022989856.16.0e-7393.06ferredoxin-thioredoxin reductase catalytic chain, chloroplastic-like [Cucurbita ... [more]
BLAST of CSPI05G28400 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G04700.18.2e-6073.97ferredoxin thioredoxin reductase catalytic beta chain family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004209Ferredoxin thioredoxin reductase catalytic beta subunitPFAMPF02943FeThRed_Bcoord: 39..138
e-value: 3.0E-40
score: 136.5
IPR004209Ferredoxin thioredoxin reductase catalytic beta subunitPANTHERPTHR35113FERREDOXIN-THIOREDOXIN REDUCTASE CATALYTIC CHAIN, CHLOROPLASTICcoord: 22..140
IPR036644Ferredoxin thioredoxin reductase catalytic beta subunit superfamilyGENE3D3.90.460.10Ferredoxin thioredoxin reductase catalytic beta subunitcoord: 29..144
e-value: 2.0E-50
score: 171.4
IPR036644Ferredoxin thioredoxin reductase catalytic beta subunit superfamilySUPERFAMILY57662Ferredoxin thioredoxin reductase (FTR), catalytic beta chaincoord: 36..141

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI05G28400.1CSPI05G28400.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0051539 4 iron, 4 sulfur cluster binding
molecular_function GO:0103012 ferredoxin-thioredoxin reductase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors